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Ghorbel M, Zribi I, Haddaji N, Siddiqui AJ, Bouali N, Brini F. Genome-Wide Identification and Expression Analysis of Catalase Gene Families in Triticeae. PLANTS (BASEL, SWITZERLAND) 2023; 13:11. [PMID: 38202319 PMCID: PMC10781083 DOI: 10.3390/plants13010011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 12/03/2023] [Accepted: 12/11/2023] [Indexed: 01/12/2024]
Abstract
Aerobic metabolism in plants results in the production of hydrogen peroxide (H2O2), a significant and comparatively stable non-radical reactive oxygen species (ROS). H2O2 is a signaling molecule that regulates particular physiological and biological processes (the cell cycle, photosynthesis, plant growth and development, and plant responses to environmental challenges) at low concentrations. Plants may experience oxidative stress and ultimately die from cell death if excess H2O2 builds up. Triticum dicoccoides, Triticum urartu, and Triticum spelta are different ancient wheat species that present different interesting characteristics, and their importance is becoming more and more clear. In fact, due to their interesting nutritive health, flavor, and nutritional values, as well as their resistance to different parasites, the cultivation of these species is increasingly important. Thus, it is important to understand the mechanisms of plant tolerance to different biotic and abiotic stresses by studying different stress-induced gene families such as catalases (CAT), which are important H2O2-metabolizing enzymes found in plants. Here, we identified seven CAT-encoding genes (TdCATs) in Triticum dicoccoides, four genes in Triticum urartu (TuCATs), and eight genes in Triticum spelta (TsCATs). The accuracy of the newly identified wheat CAT gene members in different wheat genomes is confirmed by the gene structures, phylogenetic relationships, protein domains, and subcellular location analyses discussed in this article. In fact, our analysis showed that the identified genes harbor the following two conserved domains: a catalase domain (pfam00199) and a catalase-related domain (pfam06628). Phylogenetic analyses showed that the identified wheat CAT proteins were present in an analogous form in durum wheat and bread wheat. Moreover, the identified CAT proteins were located essentially in the peroxisome, as revealed by in silico analyses. Interestingly, analyses of CAT promoters in those species revealed the presence of different cis elements related to plant development, maturation, and plant responses to different environmental stresses. According to RT-qPCR, Triticum CAT genes showed distinctive expression designs in the studied organs and in response to different treatments (salt, heat, cold, mannitol, and ABA). This study completed a thorough analysis of the CAT genes in Triticeae, which advances our knowledge of CAT genes and establishes a framework for further functional analyses of the wheat gene family.
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Affiliation(s)
- Mouna Ghorbel
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha’il City 81451, Saudi Arabia; (M.G.); (N.H.); (A.J.S.); (N.B.)
| | - Ikram Zribi
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, P.O. Box 1177, Sfax 3018, Tunisia;
| | - Najla Haddaji
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha’il City 81451, Saudi Arabia; (M.G.); (N.H.); (A.J.S.); (N.B.)
| | - Arif Jamal Siddiqui
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha’il City 81451, Saudi Arabia; (M.G.); (N.H.); (A.J.S.); (N.B.)
| | - Nouha Bouali
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha’il City 81451, Saudi Arabia; (M.G.); (N.H.); (A.J.S.); (N.B.)
| | - Faiçal Brini
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, P.O. Box 1177, Sfax 3018, Tunisia;
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Ghorbel M, Haddaji N, Feki K, Tounsi S, Chihaoui M, Alghamdi A, Mseddi K, Brini F. Identification of a putative kinase interacting domain in the durum wheat catalase 1 (TdCAT1) protein. Heliyon 2023; 9:e18916. [PMID: 37609422 PMCID: PMC10440534 DOI: 10.1016/j.heliyon.2023.e18916] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Revised: 07/31/2023] [Accepted: 08/02/2023] [Indexed: 08/24/2023] Open
Abstract
Catalases are crucial antioxidant enzymes that regulate plants responses to different biotic and abiotic stresses. It has been previously shown that the activities of durum wheat catalase proteins (TdCAT1) were stimulated in the presence of divalent cations Mn2+, Mg2+, Fe2+, Zn2+, and Ca2+. In addition, TdCAT1s can interact with calmodulins in calcium-independent manner, and this interaction stimulates its catalytic activity in a calcium-dependent manner. Moreover, this activity is further enhanced by Mn2+ cations. The current study showed that wheat catalase presents different phosphorylation targets. Besides, we demonstrated that catalase is able to interact with Mitogen Activated Proteins kinases via a conserved domain. This interaction activates wheat catalase independently of its phosphorylation status but is more promoted by Mn2+, Fe2+ and Ca2+ divalent cations. Interestingly, we have demonstrated that durum wheat catalase activity is differentially regulated by Mitogen Activated Proteins kinases and Calmodulins in the presence of calcium. Moreover, the V0 of the reaction increase gradually following the increasing quantities of Mn2+ divalent cations. Such results have never been described before and suggest i) complex regulatory mechanisms exerted on wheat catalase, ii) divalent cations (Mn2+; Mg2+; Ca2+ and Fe2+) act as key cofactors in these regulatory mechanisms.
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Affiliation(s)
- Mouna Ghorbel
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha'il City, 81451, Saudi Arabia
| | - Najla Haddaji
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha'il City, 81451, Saudi Arabia
| | - Kaouthar Feki
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, P.O. Box 1177, Sfax, 3018, Tunisia
| | - Sana Tounsi
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, P.O. Box 1177, Sfax, 3018, Tunisia
| | - Mejda Chihaoui
- Computer Science Departement, Applied College- University of Ha'il, P.O. Box 2440, Ha'il City, 81451, Saudi Arabia
| | - Ahmad Alghamdi
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha'il City, 81451, Saudi Arabia
| | - Khalil Mseddi
- Department of Biology, Faculty of Science of Sfax, University of Sfax, Sfax, 3000, Tunisia
| | - Faiçal Brini
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, P.O. Box 1177, Sfax, 3018, Tunisia
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Ghorbel M, Zribi I, Besbes M, Bouali N, Brini F. Catalase Gene Family in Durum Wheat: Genome-Wide Analysis and Expression Profiling in Response to Multiple Abiotic Stress Conditions. PLANTS (BASEL, SWITZERLAND) 2023; 12:2720. [PMID: 37514334 PMCID: PMC10384705 DOI: 10.3390/plants12142720] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 07/18/2023] [Accepted: 07/19/2023] [Indexed: 07/30/2023]
Abstract
Catalase (CAT) is an antioxidant enzyme expressed by the CAT gene family and exists in almost all aerobic organisms. In fact, the CAT enzyme modulates the hydrogen peroxide (H2O2) contents in cells by translating this toxic compound into water (H2O) and O2- to reduce reactive oxygen species (ROS) contents in cells. ROS are produced as a result of biotic and abiotic environmental stressors. To avoid ROS toxicity, plants are armed with different enzymatic and non-enzymatic systems to decompose ROS. Among the enzymatic system, CAT proteins are well studied. CAT not only controls growth and development in plants but is also involved in plant defense against different stresses. So far, the CAT gene family has not been reported in durum wheat (Triticum turgidum ssp. durum L.). Therefore, a genome-wide comprehensive analysis was conducted to classify the CAT genes in the durum wheat genome. Here, six TdCAT genes were identified. Based on phylogenetics, the TdCAT genes belong to three groups (Groups I-III) which is explainable by their comparable structural characteristics. Using bio-informatic analysis, we found that the secondary and tertiary structures were conserved among plants and present similar structures among durum wheat CATs. Two conserved domains (pfam00199 and pfam06628) are also present in all identified proteins, which have different subcellular localizations: peroxisome and mitochondrion. By analyzing their promoters, different cis-elements were identified, such as hormone-correlated response and stress-related responsive elements. Finally, we studied the expression pattern of two catalase genes belonging to two different sub-classes under different abiotic stresses. Expression profiling revealed that TdCAT2 and TdCAT3 presented a constitutive expression pattern. Moreover, both genes are induced in response to salt, mannitol, cold, heat and ABA. Thus, we speculate that those genes are activated by different stresses, such as oxygen deficiency, light, cold, abscisic acid and methyl jasmonate. Further, this study will help in understanding the behavior of CAT genes during environmental stress in durum wheat and in Triticeae species in general.
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Affiliation(s)
- Mouna Ghorbel
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha'il City 81451, Saudi Arabia
| | - Ikram Zribi
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha'il City 81451, Saudi Arabia
| | - Malek Besbes
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha'il City 81451, Saudi Arabia
| | - Nouha Bouali
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha'il City 81451, Saudi Arabia
| | - Faiçal Brini
- Laboratory of Biotechnology and Plant Improvement, Centre of Biotechnology of Sfax, P.O. Box 1177, Sfax 3018, Tunisia
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Sarcheshmeh MK, Abedi A, Aalami A. Genome-wide survey of catalase genes in Brassica rapa, Brassica oleracea, and Brassica napus: identification, characterization, molecular evolution, and expression profiling of BnCATs in response to salt and cadmium stress. PROTOPLASMA 2023; 260:899-917. [PMID: 36495350 DOI: 10.1007/s00709-022-01822-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2022] [Accepted: 11/17/2022] [Indexed: 06/17/2023]
Abstract
Catalase (CAT, EC 1.11.1.6), one of the most important antioxidant enzymes, can control excess levels of H2O2 produced under oxidative stress in plants. In this study, 16, 8, and 7 CAT genes in the genome of Brassica napus, B. rapa, and B. oleracea were identified, respectively. Phylogenetic studies showed that CATs could be divided into two main groups, each containing specific monocotyledon and dicotyledon subgroups. Motifs, gene structure, and intron phase of CATs in B. napus, Brassica rapa, and Brassica oleracea are highly conserved. Analysis of codon usage bias showed the mutation pressure and natural selection of the codon usage of CATs. Segmental duplication and polyploid were major factors in the expansion of this gene family in B. napus, and genes have experienced negative selection during evolution. Existence of hormones and stress-responsive cis-elements and identifying miRNA molecules affecting CATs showed that these genes are complexly regulated at the transcriptional and posttranscriptional levels. Based on RNA-seq data, CATs are divided into two groups; the first group has moderate and specific expression in flowers, leaves, stems, and roots, while the second group shows expression in most tissues. qRT-PCR analysis showed that the expression of these genes is dynamic and has a specific expression consistent with other CAT genes in response to salinity and cadmium (Cd) stresses. These results provide information for further investigation of the function of CAT genes in response to stresses and the development of tolerant plants.
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Affiliation(s)
- Monavar Kanani Sarcheshmeh
- Department of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran
| | - Amin Abedi
- Department of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran
| | - Ali Aalami
- Department of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran.
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Tian G, Wang S, Wu J, Wang Y, Wang X, Liu S, Han D, Xia G, Wang M. Allelic variation of TaWD40-4B.1 contributes to drought tolerance by modulating catalase activity in wheat. Nat Commun 2023; 14:1200. [PMID: 36864053 PMCID: PMC9981739 DOI: 10.1038/s41467-023-36901-6] [Citation(s) in RCA: 15] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Accepted: 02/22/2023] [Indexed: 03/04/2023] Open
Abstract
Drought drastically restricts wheat production, so to dissect allelic variations of drought tolerant genes without imposing trade-offs between tolerance and yield is essential to cope with the circumstance. Here, we identify a drought tolerant WD40 protein encoding gene TaWD40-4B.1 of wheat via the genome-wide association study. The full-length allele TaWD40-4B.1C but not the truncated allele TaWD40-4B.1T possessing a nonsense nucleotide variation enhances drought tolerance and grain yield of wheat under drought. TaWD40-4B.1C interacts with canonical catalases, promotes their oligomerization and activities, and reduces H2O2 levels under drought. The knock-down of catalase genes erases the role of TaWD40-4B.1C in drought tolerance. TaWD40-4B.1C proportion in wheat accessions is negatively correlative with the annual rainfall, suggesting this allele may be selected during wheat breeding. The introgression of TaWD40-4B.1C enhances drought tolerance of the cultivar harboring TaWD40-4B.1T. Therefore, TaWD40-4B.1C could be useful for molecular breeding of drought tolerant wheat.
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Affiliation(s)
- Geng Tian
- The Key Laboratory of Plant Development and Environment Adaptation Biology, Ministry of Education, School of Life Science, Shandong University, 266237, Qingdao, Shandong, P. R. China
| | - Shubin Wang
- Institute of Vegetable Research, Shandong Academy of Agricultural Sciences, 250100, Jinan, Shandong, P. R. China
| | - Jianhui Wu
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, 712100, Yangling, Shaanxi, P. R. China
| | - Yanxia Wang
- Shijiazhuang Academy of Agriculture and Forestry Sciences, 050050, Shijiazhuang, Hebei, P. R. China
| | - Xiutang Wang
- Shijiazhuang Academy of Agriculture and Forestry Sciences, 050050, Shijiazhuang, Hebei, P. R. China
| | - Shuwei Liu
- The Key Laboratory of Plant Development and Environment Adaptation Biology, Ministry of Education, School of Life Science, Shandong University, 266237, Qingdao, Shandong, P. R. China
| | - Dejun Han
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, 712100, Yangling, Shaanxi, P. R. China
| | - Guangmin Xia
- The Key Laboratory of Plant Development and Environment Adaptation Biology, Ministry of Education, School of Life Science, Shandong University, 266237, Qingdao, Shandong, P. R. China.
| | - Mengcheng Wang
- The Key Laboratory of Plant Development and Environment Adaptation Biology, Ministry of Education, School of Life Science, Shandong University, 266237, Qingdao, Shandong, P. R. China.
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6
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Liang X, Luo G, Li W, Yao A, Liu W, Xie L, Han M, Li X, Han D. Overexpression of a Malus baccata CBF transcription factor gene, MbCBF1, Increases cold and salinity tolerance in Arabidopsis thaliana. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022; 192:230-242. [PMID: 36272190 DOI: 10.1016/j.plaphy.2022.10.012] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2022] [Revised: 09/09/2022] [Accepted: 10/09/2022] [Indexed: 06/16/2023]
Abstract
CBFs play a crucial role when plants are in adverse environmental conditions for growth. However, there are few reports on the role of CBF gene in stress responses of Malus plant. In this experiment, a new CBF TF was separated from M. baccata which was named MbCBF1. MbCBF1 protein was found to be localized in the nucleus after subcellular localization. Furthermore, the expression of MbCBF1 was highly accumulated in new leaves and roots due to the high influence of cold and high salt in M. baccata seedlings. After introducing MbCBF1 into A. thaliana, transgenic A. thaliana can better adapt to the living conditions of cold and high salt. The increased expression of MbCBF1 in A. thaliana also increased the contents of proline, remarkablely improved the activities of SOD, POD and CAT, but the content of MDA was decreased. Although the chlorophyll content also decreased, it decreased less in transgenic plants. In short, above date showed that MbCBF1 has a positive effect on improving A. thaliana cold and high salt tolerance. MbCBF1 can regulate the expression of its downstream gene in transgenic lines, up-regulate the expression of key genes COR15a, RD29a/bandCOR6.6/47 related to low temperature under cold conditions and NCED3, CAT1, P5CS1, RD22, DREB2A,PIF1/4, SOS1 and SnRK2.4 related to salt stress under high salt conditions, so as to further improve the adaptability and tolerance of the transgenic plants to low temperature and high salt environment.
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Affiliation(s)
- Xiaoqi Liang
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs / National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions / College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China
| | - Guijie Luo
- Suqian Institute of Agricultural Sciences, Jiangsu Academy of Agricultural Sciences, Suqian, 223800, China
| | - Wenhui Li
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs / National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions / College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China
| | - Anqi Yao
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs / National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions / College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China
| | - Wanda Liu
- Horticulture Branch of Heilongjiang Academy of Agricultural Sciences, Harbin, 150040, China
| | - Liping Xie
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs / National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions / College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China
| | - Meina Han
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs / National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions / College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China
| | - Xingguo Li
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs / National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions / College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China.
| | - Deguo Han
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs / National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions / College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China.
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Ghorbel M, Besbes M, Haddaji N, Bouali N, Brini F. Identification and Expression Profiling of Two Saudi Arabia Catalase Genes from Wheat and Barley in Response to Abiotic and Hormonal Stresses. Antioxidants (Basel) 2022; 11:2208. [PMID: 36358580 PMCID: PMC9686680 DOI: 10.3390/antiox11112208] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 10/31/2022] [Accepted: 11/03/2022] [Indexed: 07/30/2023] Open
Abstract
Catalase is a crucial enzyme in antioxidant defense systems protecting eukaryotes from oxidative stress. These proteins are present in almost all living organisms and play important roles in controlling plant responses to biotic and abiotic stresses by catalyzing the decomposition of H2O2. Despite their importance, little is known about their expression in the majority of monocotyledonous species. Here, we isolated and characterized two novel catalase genes from Triticum turgidum and Hordeum vulgare, designated as TtCAT1 and HvCAT1, respectively. Phylogenetic analysis revealed that TtCAT1 and HvCAT1 presented 492 aa and shared an important identity with other catalase proteins belonging to subfamily 1. Using bioinformatic analysis, we predicted the 3D structure models of TtCAT1 and HvCAT1. Interestingly, analysis showed that the novel catalases harbor a peroxisomal targeting signal (PTS1) located at their C-terminus portion, as shown for other catalase proteins. In addition, this motif is responsible for the in silico peroxisomal localization of both proteins. Finally, RT-qPCR analysis showed that TtCAT1 and HvCAT1 are highly expressed in leaves in normal conditions but faintly in roots. Moreover, both genes are upregulated after the application of different stresses such as salt, osmotic, cold, heavy metal, and hormonal stresses. The positive responses of TtCAT1 and HvCAT1 to the various stimuli suggested that these proteins can help to protect both species against environmental stresses.
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Affiliation(s)
- Mouna Ghorbel
- Biology Department, Faculty of Science, University of Hail, Ha’il 2440, Saudi Arabia
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, Sfax 3018, Tunisia
| | - Malek Besbes
- Biology Department, Faculty of Science, University of Hail, Ha’il 2440, Saudi Arabia
| | - Najla Haddaji
- Biology Department, Faculty of Science, University of Hail, Ha’il 2440, Saudi Arabia
| | - Nouha Bouali
- Biology Department, Faculty of Science, University of Hail, Ha’il 2440, Saudi Arabia
| | - Faiçal Brini
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, Sfax 3018, Tunisia
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Ghorbel M, Feki K, Tounsi S, Bouali N, Besbes M, Brini F. The Putative Auto-Inhibitory Domain of Durum Wheat Catalase (TdCAT1) Positively Regulates Bacteria Cells in Response to Different Stress Conditions. Antioxidants (Basel) 2022; 11:antiox11091820. [PMID: 36139894 PMCID: PMC9495866 DOI: 10.3390/antiox11091820] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2022] [Revised: 09/03/2022] [Accepted: 09/09/2022] [Indexed: 01/24/2023] Open
Abstract
Catalase is a crucial enzyme in the antioxidant defense system protecting organisms from oxidative stress. Proteins of this kind play important roles in controlling plant response to biotic and abiotic stresses by catalyzing the decomposition of H2O2. The durum wheat catalase 1, TdCAT1, has been previously isolated and characterized. Here, using bio-informatic analysis, we showed that durum wheat catalase 1 TdCAT1 harbors different novel conserved domains. In addition, TdCAT1 contains various phosphorylation residues and S-Nitrosylation residues located at different positions along the protein sequence. TdCAT1 activity decreased after treatment with λ−phosphatase. On the other hand, we showed that durum wheat catalase 1 (TdCAT1) exhibits a low CAT activity in vitro, whereas a deleted form of TdCAT1 has better activity compared to the full-length protein (TdCAT460), suggesting that TdCAT1 could present a putative autoinhibitory domain in its C-terminal portion. Moreover, we showed that TdCAT1 positively regulates E. coli cells in response to salt, ionic and osmotic stresses as well as heavy metal stress in solid and liquid mediums. Such effects had not been reported and lead us to suggest that the durum wheat catalase 1 TdCAT1 protein could play a positive role in response to a wide array of abiotic stress conditions.
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Affiliation(s)
- Mouna Ghorbel
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha’il City 81451, Saudi Arabia
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, P.O. Box 1177, Sfax 3018, Tunisia
| | - Kaouthar Feki
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, P.O. Box 1177, Sfax 3018, Tunisia
| | - Sana Tounsi
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, P.O. Box 1177, Sfax 3018, Tunisia
| | - Nouha Bouali
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha’il City 81451, Saudi Arabia
| | - Malek Besbes
- Department of Biology, College of Sciences, University of Hail, P.O. Box 2440, Ha’il City 81451, Saudi Arabia
| | - Faiçal Brini
- Laboratory of Biotechnology and Plant Improvement, Center of Biotechnology of Sfax, P.O. Box 1177, Sfax 3018, Tunisia
- Correspondence:
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Sahoo RK, Chandan RK, Swain DM, Tuteja N, Jha G. Heterologous overexpression of PDH45 gene of pea provides tolerance against sheath blight disease and drought stress in rice. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022; 186:242-251. [PMID: 35930936 DOI: 10.1016/j.plaphy.2022.07.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Revised: 06/29/2022] [Accepted: 07/13/2022] [Indexed: 06/15/2023]
Abstract
Biotic and abiotic stress tolerant crops are required for sustainable agriculture as well as ensuring global food security. In a previous study, we have reported that heterologous overexpression of pea DNA helicase (PDH45), a DEAD-box family member protein, provides salinity stress tolerance in rice. The improved management of photosynthetic machinery and scavenging of reactive oxygen species (ROS) are associated with PDH45 mediated salinity stress tolerance. However, the role of PDH45 in biotic and other abiotic stress (drought) tolerance remains unexplored. In the present study, we have generated marker-free transgenic IR64 rice lines that overexpress PDH45 under the CaMV35S promoter. The transgenic rice lines exhibited a significant level of tolerance against sheath blight disease, caused by Rhizoctonia solani, a polyphagous necrotrophic fungal pathogen. The defense as well as antioxidant responsive marker genes were significantly upregulated in the PDH45 overexpressing (OE) rice lines, upon pathogen infection. Moreover, the OE lines exhibited tolerance to drought stress and various antioxidant as well as drought responsive marker genes were significantly upregulated in them, upon drought stress. Overall, the current study emphasizes that heterologous overexpression of PDH45 provides abiotic as well as biotic stress tolerance in rice. Tolerance against drought as well as sheath blight disease by overexpression of a single gene (PDH45) signifies the practical implication of the present study. Moreover, considering the conserved nature of the gene in different plant species, we anticipate that PDH45 can be gainfully deployed to impart tolerance against multiple stresses in agriculturally important crops.
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Affiliation(s)
- Ranjan Kumar Sahoo
- Centurion University of Technology and Management, Bhubaneswar, Odisha, India; International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, 110067, India
| | - Ravindra Kumar Chandan
- Plant Microbe Interactions Laboratory, National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
| | - Durga Madhab Swain
- International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, 110067, India; Plant Microbe Interactions Laboratory, National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
| | - Narendra Tuteja
- International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, 110067, India.
| | - Gopaljee Jha
- Plant Microbe Interactions Laboratory, National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India.
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Li X, Liang X, Li W, Yao A, Liu W, Wang Y, Yang G, Han D. Isolation and Functional Analysis of MbCBF2, a Malus baccata (L.) Borkh CBF Transcription Factor Gene, with Functions in Tolerance to Cold and Salt Stress in Transgenic Arabidopsis thaliana. Int J Mol Sci 2022; 23:ijms23179827. [PMID: 36077223 PMCID: PMC9456559 DOI: 10.3390/ijms23179827] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Revised: 08/25/2022] [Accepted: 08/26/2022] [Indexed: 11/16/2022] Open
Abstract
CBF transcription factors (TFs) are key regulators of plant stress tolerance and play an integral role in plant tolerance to adverse growth environments. However, in the current research situation, there are few reports on the response of the CBF gene to Begonia stress. Therefore, this experiment investigated a novel CBF TF gene, named MbCBF2, which was isolated from M. baccata seedlings. According to the subcellular localization results, the MbCBF2 protein was located in the nucleus. In addition, the expression level of MbCBF2 was higher in new leaves and roots under low-temperature and high-salt induction. After the introduction of MbCBF2 into Arabidopsis thaliana, the adaptability of transgenic A. thaliana to cold and high-salt environments was significantly enhanced. In addition, the high expression of MbCBF2 can also change many physiological indicators in transgenic A. thaliana, such as increased chlorophyll and proline content, superoxide dismutase (SOD), peroxidase (POD) and catalase (CAT) activity, and reduced malondialdehyde (MDA) content. Therefore, it can be seen from the above results that MbCBF2 can positively regulate the response of A. thaliana to low-temperature and osmotic stress. In addition, MbCBF2 can also regulate the expression of its downstream genes in transgenic lines. It can not only positively regulate the expression of the downstream key genes AtCOR15a, AtERD10, AtRD29a/b and AtCOR6.6/47, related to cold stress at low temperatures, but can also positively regulate the expression of the downstream key genes AtNCED3, AtCAT1, AtP5CS, AtPIF1/4 and AtSnRK2.4, related to salt stress. That is, the overexpression of the MbCBF2 gene further improved the adaptability and tolerance of transgenic plants to low-temperature and high-salt environments.
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Affiliation(s)
- Xingguo Li
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs/National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions/College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Xiaoqi Liang
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs/National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions/College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Wenhui Li
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs/National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions/College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Anqi Yao
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs/National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions/College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Wanda Liu
- Horticulture Branch of Heilongjiang Academy of Agricultural Sciences, Harbin 150040, China
| | - Yu Wang
- Horticulture Branch of Heilongjiang Academy of Agricultural Sciences, Harbin 150040, China
| | - Guohui Yang
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs/National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions/College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
- Correspondence: (G.Y.); (D.H.)
| | - Deguo Han
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs/National-Local Joint Engineering Research Center for Development and Utilization of Small Fruits in Cold Regions/College of Horticulture & Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
- Correspondence: (G.Y.); (D.H.)
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11
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The Activity of the Durum Wheat (Triticum durum L.) Catalase 1 (TdCAT1) Is Modulated by Calmodulin. Antioxidants (Basel) 2022; 11:antiox11081483. [PMID: 36009202 PMCID: PMC9404813 DOI: 10.3390/antiox11081483] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Revised: 06/30/2022] [Accepted: 07/27/2022] [Indexed: 01/14/2023] Open
Abstract
Plant catalases (CAT) are involved in the cellular scavenging of the reactive oxygen species during developmental processes and in response to abiotic and biotic stresses. However, little is known about the regulation of the CAT activity to ensure efficient antioxidant function. Using bioinformatic analyses, we showed that durum wheat catalase 1 (TdCAT1) harbors highly conserved cation-binding and calmodulin binding (CaMBD) domains which are localized at different positions of the protein. As a result, the catalytic activity of TdCAT1 is enhanced in vitro by the divalent cations Mn2+ and Fe2+ and to a lesser extent by Cu2+, Zn2+, and Mg2+. Moreover, the GST-pull down assays performed here revealed that TdCAT1 bind to the wheat CaM (TdCaM1.3) in a Ca2+-independent manner. Furthermore, the TdCaM1.3/Ca2+ complex is stimulated in a CaM-dose-dependent manner by the catalytic activity of TdCAT1, which is further increased in the presence of Mn2+ cations. The catalase activity of TdCAT1 is enhanced by various divalent cations and TdCaM1.3 in a Ca-dependent manner. Such effects are not reported so far and raise a possible role of CaM and cations in the function of CATs during cellular response to oxidative stress.
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12
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Mshenskaya N, Sinitsyna Y, Kalyasova E, Valeria K, Zhirova A, Karpeeva I, Ilin N. Influence of Schumann Range Electromagnetic Fields on Components of Plant Redox Metabolism in Wheat and Peas. PLANTS 2022; 11:plants11151955. [PMID: 35956432 PMCID: PMC9370302 DOI: 10.3390/plants11151955] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Revised: 07/21/2022] [Accepted: 07/21/2022] [Indexed: 11/16/2022]
Abstract
The Schumann Resonances (ScR) are Extremely Low Frequency (ELF) electromagnetic resonances in the Earth-ionosphere cavity excited by global lightning discharges. ScR are the part of electromagnetic field (EMF) of Earth. The influence of ScR on biological systems is still insufficiently understood. The purpose of the study is to characterize the possible role of the plant cell redox metabolism regulating system in the Schumann Resonances EMF perception. Activity of catalase and superoxide dismutase, their isoenzyme structure, content of malondialdehyde, composition of polar lipids in leaf extracts of wheat and pea plants treated with short-time (30 min) and long-time (18 days) ELF EMF with a frequency of 7.8 Hz, 14.3 Hz, 20.8 Hz have been investigated. Short-time exposure ELF EMF caused more pronounced bio effects than long-time exposure. Wheat catalase turned out to be the most sensitive parameter to magnetic fields. It is assumed that the change in the activity of wheat catalase after a short-term ELF EMF may be associated with the ability of this enzyme to perceive the action of a weak EMF through calcium calmodulin and/or cryptochromic signaling systems.
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Affiliation(s)
- Natalia Mshenskaya
- Department of Biochemistry and Biotechnology, N.I. Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (Y.S.); (E.K.); (K.V.); (A.Z.); (I.K.)
- Earth’s Electromagnetic Environment Laboratory, Institute of Applied Physics of Russian Academy of Sciences, 603600 Nizhny Novgorod, Russia;
- Correspondence:
| | - Yulia Sinitsyna
- Department of Biochemistry and Biotechnology, N.I. Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (Y.S.); (E.K.); (K.V.); (A.Z.); (I.K.)
| | - Ekaterina Kalyasova
- Department of Biochemistry and Biotechnology, N.I. Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (Y.S.); (E.K.); (K.V.); (A.Z.); (I.K.)
| | - Koshcheeva Valeria
- Department of Biochemistry and Biotechnology, N.I. Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (Y.S.); (E.K.); (K.V.); (A.Z.); (I.K.)
| | - Anastasia Zhirova
- Department of Biochemistry and Biotechnology, N.I. Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (Y.S.); (E.K.); (K.V.); (A.Z.); (I.K.)
| | - Irina Karpeeva
- Department of Biochemistry and Biotechnology, N.I. Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (Y.S.); (E.K.); (K.V.); (A.Z.); (I.K.)
| | - Nikolay Ilin
- Earth’s Electromagnetic Environment Laboratory, Institute of Applied Physics of Russian Academy of Sciences, 603600 Nizhny Novgorod, Russia;
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13
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Kerchev PI, Van Breusegem F. Improving oxidative stress resilience in plants. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 109:359-372. [PMID: 34519111 DOI: 10.1111/tpj.15493] [Citation(s) in RCA: 41] [Impact Index Per Article: 20.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 09/02/2021] [Accepted: 09/08/2021] [Indexed: 05/22/2023]
Abstract
Originally conceived as harmful metabolic byproducts, reactive oxygen species (ROS) are now recognized as an integral part of numerous cellular programs. Thanks to their diverse physicochemical properties, compartmentalized production, and tight control exerted by the antioxidant machinery they activate signaling pathways that govern plant growth, development, and defense. Excessive ROS levels are often driven by adverse changes in environmental conditions, ultimately causing oxidative stress. The associated negative impact on cellular constituents have been a major focus of decade-long research efforts to improve the oxidative stress resilience by boosting the antioxidant machinery in model and crop species. We highlight the role of enzymatic and non-enzymatic antioxidants as integral factors of multiple signaling cascades beyond their mere function to prevent oxidative damage under adverse abiotic stress conditions.
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Affiliation(s)
- Pavel I Kerchev
- Phytophthora Research Centre, Department of Molecular Biology and Radiobiology, Faculty of AgriSciences, Mendel University in Brno, 61300, Brno, Czech Republic
| | - Frank Van Breusegem
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052, Gent, Belgium
- Center for Plant Systems Biology, VIB, 9052, Gent, Belgium
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14
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Feki K, Tounsi S, Mrabet M, Mhadhbi H, Brini F. Recent advances in physiological and molecular mechanisms of heavy metal accumulation in plants. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:64967-64986. [PMID: 34599711 DOI: 10.1007/s11356-021-16805-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Accepted: 09/24/2021] [Indexed: 05/27/2023]
Abstract
Among abiotic stress, the toxicity of metals impacts negatively on plants' growth and productivity. This toxicity promotes various perturbations in plants at different levels. To withstand stress, plants involve efficient mechanisms through the implication of various signaling pathways. These pathways enhance the expression of many target genes among them gene coding for metal transporters. Various metal transporters which are localized at the plasma membrane and/or at the tonoplast are crucial in metal stress response. Furthermore, metal detoxification is provided by metal-binding proteins like phytochelatins and metallothioneins. The understanding of the molecular basis of metal toxicities signaling pathways and tolerance mechanisms is crucial for genetic engineering to produce transgenic plants that enhance phytoremediation. This review presents an overview of the recent advances in our understanding of metal stress response. Firstly, we described the effect of metal stress on plants. Then, we highlight the mechanisms involved in metal detoxification and the importance of the regulation in the response to heavy metal stress. Finally, we mentioned the importance of genetic engineering for enhancing the phytoremediation technique. In the end, the response to heavy metal stress is complex and implicates various components. Thus, further studies are needed to better understand the mechanisms involved in response to this abiotic stress.
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Affiliation(s)
- Kaouthar Feki
- Laboratory of Legumes and Sustainable Agrosystem (L2AD), Center of Biotechnology of Borj-Cédria, BP901, 2050, Hammam-Lif, Tunisia
| | - Sana Tounsi
- Biotechnology and Plant Improvement Laboratory, Center of Biotechnology of Sfax (CBS), University of Sfax, B.P "1177", 3018, Sfax, Tunisia
| | - Moncef Mrabet
- Laboratory of Legumes and Sustainable Agrosystem (L2AD), Center of Biotechnology of Borj-Cédria, BP901, 2050, Hammam-Lif, Tunisia
| | - Haythem Mhadhbi
- Laboratory of Legumes and Sustainable Agrosystem (L2AD), Center of Biotechnology of Borj-Cédria, BP901, 2050, Hammam-Lif, Tunisia
| | - Faiçal Brini
- Biotechnology and Plant Improvement Laboratory, Center of Biotechnology of Sfax (CBS), University of Sfax, B.P "1177", 3018, Sfax, Tunisia.
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15
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Tounsi S, Kamoun Y, Feki K, Jemli S, Saïdi MN, Ziadi H, Alcon C, Brini F. Localization and expression analysis of a novel catalase from Triticum monococcum TmCAT1 involved in response to different environmental stresses. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2019; 139:366-378. [PMID: 30954019 DOI: 10.1016/j.plaphy.2019.03.039] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2019] [Revised: 03/26/2019] [Accepted: 03/27/2019] [Indexed: 05/09/2023]
Abstract
Catalase proteins play a crucial role in detoxifying hydrogen peroxide, generated during plant growth, and in response to various environmental stresses. Despite their importance, little is known about their localization and expression in wheat. In this study, we identified and characterized a novel peroxisomal catalase gene from Triticum monococcum, designated as TmCAT1. Phylogenetic analysis revealed that TmCAT1 shared high identity with TdCAT1 and other plant catalases belonging to subfamily 1. We predicted the 3D structure model and the oligomerization arrangement of TmCAT1. Besides, we displayed an arrangement in asymmetric unit, which involved interactions including, mainly, residues from N-terminal domain. Interestingly, sequence analysis indicated that TmCAT1, like TdCAT1, had the peroxisomal targeting signal (PTS1) around its C-terminus. Transient expression of TmCAT1-GFP and TdCAT1-GFP in tobacco leaves revealed that the two fused proteins are targeted into peroxisomes. However, the truncated forms lacking the tripeptide QKL remained in the cytosol. Concerning the expression profile analysis, TmCAT1 is expressed especially in leaves in normal condition. On the other hand, it is up-regulated by different stress incorporating salt, osmotic, oxidative, heavy metal and hormones stresses. Functional analysis by heterologous expression in yeast cells showed that TmCAT1 improved tolerance to multiple abiotic stresses. The presence of important cis-regulatory elements in the promoter region of TmCAT1 strongly reinforces the interest of this gene in plant adaptation to various stresses.
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Affiliation(s)
- Sana Tounsi
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS)/University of Sfax, B.P ''1177'', 3018, Sfax, Tunisia
| | - Yosra Kamoun
- Laboratory of Molecular Biotechnology of Eukaryotes, Centre of Biotechnology of Sfax, B.P ''1177'', 3018, Sfax, Tunisia
| | - Kaouthar Feki
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS)/University of Sfax, B.P ''1177'', 3018, Sfax, Tunisia; Laboratory of Legumes, Centre of Biotechnology Bordj Cedria, BP 901, 2050, Hammam Lif, Tunisia
| | - Sonia Jemli
- Laboratory of Microbial Biotechnology and Enzymes Engineering, Centre of Biotechnology of Sfax, B.P ''1177'', 3018, Sfax, Tunisia
| | - Mohamed Najib Saïdi
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS)/University of Sfax, B.P ''1177'', 3018, Sfax, Tunisia
| | - Hajer Ziadi
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS)/University of Sfax, B.P ''1177'', 3018, Sfax, Tunisia
| | - Carine Alcon
- Biochimie & Physiologie Moléculaire des Plantes, PHIV Platform, UMR 5004 CNRS/386 INRA/Supagro Montpellier / Université Montpellier 2, Campus Supagro-INRA, 34060, Montpellier Cedex 2, France
| | - Faiçal Brini
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS)/University of Sfax, B.P ''1177'', 3018, Sfax, Tunisia.
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16
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Su Q, Yang J, Fu QY, Jia FY, Li SP, Li Y, Li YY. Profiling of indole metabolic pathway in thermo-sensitive Bainong male sterile line in wheat ( Triticum aestivum L.). PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2019; 25:263-275. [PMID: 30804648 PMCID: PMC6352539 DOI: 10.1007/s12298-018-0626-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2018] [Revised: 10/17/2018] [Accepted: 11/12/2018] [Indexed: 06/09/2023]
Abstract
Bainong male sterile (BNS) wheat (Triticum aestivum L.) is a thermo-sensitive genic male sterile line with excellent sterility and self-restoration. We focused on transcriptional profiles of differentially expressed probes between BNS sterile and fertile anthers. Anthers, rachis and spikes from sterile line and fertile line were collected. Extracted RNA was assayed using wheat expression microarray and Gene Ontology was analyzed using Cytoscape with ClueGO. An indole (indole-3-acetic acid: IAA) metabolism pathway sub-network was almost formed in all differentially expressed profiles between sterile and fertile samples. IAA sub-network contained four nodes of indole and alkaloid metabolism connecting main network via indole compounds. This sub-network was absent in rachis and intact in transformed fertile anthers, which was the main differently expressed metabolism pathway in F1 anthers with restorer genes. Alkaloid metabolism was absent in sterile anthers. Abnormal metabolism of IAA may be involved in BNS sterility. BNS transformation may be regulated by the production of IAA and alkaloid metabolism pathway, which favor the safe utilization of the sterile line in hybrid wheat production.
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Affiliation(s)
- Qing Su
- Henan Institute of Science and Technology/Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, 453003 China
- Henan University, Kaifeng, 475000 China
| | - Jing Yang
- Henan Institute of Science and Technology/Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, 453003 China
| | - Qing Yun Fu
- Henan Institute of Science and Technology/Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, 453003 China
| | - Fei Yun Jia
- Henan Institute of Science and Technology/Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, 453003 China
| | | | - Yong Li
- Henan Institute of Science and Technology/Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, 453003 China
- Institute of Plant Physiology and Ecology, SIBS, CAS, Shanghai, 200032 China
| | - You Yong Li
- Henan Institute of Science and Technology/Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, 453003 China
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17
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Chen X, Yin G, Börner A, Xin X, He J, Nagel M, Liu X, Lu X. Comparative physiology and proteomics of two wheat genotypes differing in seed storage tolerance. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2018; 130:455-463. [PMID: 30077921 DOI: 10.1016/j.plaphy.2018.07.022] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2018] [Revised: 07/13/2018] [Accepted: 07/18/2018] [Indexed: 05/07/2023]
Abstract
The longevity of seeds stored in Genebank is based on their storability. However, the mechanism of seed storability is largely unknown. In previous studies, accelerated ageing treatments were always applied for rapidly acquiring different seed viabilities, which could not reflect the actual situation during seed storage, especially for the seed stored in Genebank. In this study, two wheat genotypes (accession TRI_23248 and TRI_10230) were supplied by IPK-Gatersleben Genebank, Germany, where they were stored for 10 years in the long-term storage (-18 °C) and at ambient conditions (20 °C) The comparison of viability of those seed after this storage period, identified TRI_23248 as storage tolerant (ST) and TRI_10230 as storage sensitive (SS). The abundance patterns of proteins in these seeds identified 93 protein spots in the ST and 105 spots in the SS seeds that were markedly changed; their functions were mainly associated with disease or defense, protein destination and storage, energy, and other. The ST seeds possessed a stronger ability in activating the defense system against oxidative damage, utilizing storage proteins for germination, and maintaining energy metabolism for ATP supply. These results provided novel insights into the mechanism of seed storability, which can facilitate the comprehensive understanding of seed longevity.
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Affiliation(s)
- Xiuling Chen
- National Crop Genebank, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Guangkun Yin
- National Crop Genebank, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Andreas Börner
- Genebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstr. 3, 06466, Stadt Seeland, OT Gatersleben, Germany
| | - Xia Xin
- National Crop Genebank, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Juanjuan He
- National Crop Genebank, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Manuela Nagel
- Genebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstr. 3, 06466, Stadt Seeland, OT Gatersleben, Germany
| | - Xu Liu
- National Crop Genebank, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Xinxiong Lu
- National Crop Genebank, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
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18
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Sun Y, Li P, Deng M, Shen D, Dai G, Yao N, Lu Y. The Ralstonia solanacearum effector RipAK suppresses plant hypersensitive response by inhibiting the activity of host catalases. Cell Microbiol 2017; 19:e12736. [PMID: 28252830 DOI: 10.1111/cmi.12736] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2016] [Revised: 02/11/2017] [Accepted: 02/28/2017] [Indexed: 11/27/2022]
Abstract
The destructive bacterial pathogen Ralstonia solanacearum delivers effector proteins via a type-III secretion system for its pathogenesis of plant hosts. However, the biochemical functions of most of these effectors remain unclear. RipAK of R. solanacearum GMI1000 is a type-III effector with unknown functions. Functional analysis demonstrated that in tobacco leaves, ripAK knockout bacteria produced an obvious hypersensitive response; also, infected tissues accumulated reactive oxygen species in a shorter period postinfection, compared with wild type. This strongly indicates that RipAK can inhibit hypersensitive response during infection. Further analysis showed that RipAK localizes to peroxisomes and interacts with host catalases (CATs) in plant cells. Truncation of 2 putative domains of RipAK caused it to fail to target the peroxisome and fail to interact with AtCATs, suggesting that RipAK localization depends on its interaction with CATs. Furthermore, heterologous expression of RipAK inhibited CAT activity in vivo and in vitro. Finally, compared with the ripAK mutant, infection with a bacterial strain overexpressing RipAK inhibited the transcription of many immunity-associated genes in infected tobacco leaves at 2- and 4-hr postinfection, although mRNA levels of NtCAT1 were upregulated. These data indicate that GMI1000 suppresses hypersensitive response by inhibiting host CATs through RipAK at early stages of infection.
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Affiliation(s)
- Yunhao Sun
- School of Life Sciences, Sun Yat-sen University, Guangzhou, People's Republic of China
| | - Pai Li
- School of Life Sciences, Sun Yat-sen University, Guangzhou, People's Republic of China
| | - Mengying Deng
- School of Life Sciences, Sun Yat-sen University, Guangzhou, People's Republic of China
| | - Dong Shen
- School of Life Sciences, Sun Yat-sen University, Guangzhou, People's Republic of China
| | - Guangyi Dai
- School of Life Sciences, Sun Yat-sen University, Guangzhou, People's Republic of China
| | - Nan Yao
- School of Life Sciences, Sun Yat-sen University, Guangzhou, People's Republic of China
| | - Yongjun Lu
- School of Life Sciences, Sun Yat-sen University, Guangzhou, People's Republic of China
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19
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Tounsi S, Feki K, Hmidi D, Masmoudi K, Brini F. Salt stress reveals differential physiological, biochemical and molecular responses in T. monococcum and T. durum wheat genotypes. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2017; 23:517-528. [PMID: 28878491 PMCID: PMC5567718 DOI: 10.1007/s12298-017-0457-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Revised: 06/09/2017] [Accepted: 06/12/2017] [Indexed: 05/30/2023]
Abstract
Salt stress responses implicate a complex mechanism and differ from plant species to another. In this study, we analyzed the physiological, biochemical and molecular responses to salt stress of the diploid wheat (T. monococcum) and compared to the tetraploid wheat (T. durum). Our results showed that the diploid wheat cultivar (cv. Turkey) is relatively tolerant to different salt stress conditions than the tetraploid wheat cultivar (cv. Om Rabia3). This tolerance was manifested by significant germination, plant growth and uptake of water generating cell turgor and development. Moreover, total chlorophyll content was higher in the diploid wheat than that in the tetraploid wheat. The Na+ content in leaf blade of the cv. Om Rabia3 was significantly higher than that of the cv. Turkey, suggesting that the diploid cultivar accumulates less toxic sodium in the photosynthetic tissues. This mechanism could be explained by the recirculation of the toxic ions Na+ into the xylem sap by SOS1 protein, which coordinates with HKT-like proteins to reduce the accumulation of Na+ ions in leaf blade. Interestingly, the expression of the three genes SOS1, HKT and NHX was enhanced under salinity especially in leaf blade of the cv. Turkey. Moreover, this wheat cultivar induced the antioxidative enzymes CAT and SOD activity more efficiently than the other cultivar.
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Affiliation(s)
- Sana Tounsi
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS), University of Sfax, BP “1177”, 3018 Sfax, Tunisia
| | - Kaouthar Feki
- Laboratoire Des Légumineuses, Centre de Biotechnologie de Bordj Cedria, BP901, CP2050 Hammam-Lif, Tunisia
| | - Dorsaf Hmidi
- Laboratoire Des Plantes Extrêmophiles (LPE), Centre de Biotechnologie de Bordj Cedria, BP901, CP2050 Hammam-Lif, Tunisia
| | - Khaled Masmoudi
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS), University of Sfax, BP “1177”, 3018 Sfax, Tunisia
- Arid Land Department, College of Food and Agriculture, Present Address: United Arab Emirates University, P.O. Box 15551, Al Ain, United Arab Emirates
| | - Faiçal Brini
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS), University of Sfax, BP “1177”, 3018 Sfax, Tunisia
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Feki K, Tounsi S, Masmoudi K, Brini F. The durum wheat plasma membrane Na +/H + antiporter SOS1 is involved in oxidative stress response. PROTOPLASMA 2017; 254:1725-1734. [PMID: 28013410 DOI: 10.1007/s00709-016-1066-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2016] [Accepted: 12/14/2016] [Indexed: 05/25/2023]
Abstract
We have shown previously that the durum wheat TdSOS1 excludes Na+ and Li+ ions outside cells. Moreover, this protein is activated by Arabidopsis kinase SOS2 through phosphorylation. The elimination of both SOS2 phosphorylation sites and the auto-inhibitory domain produces a hyperactive TdSOS1∆972 form, which have a maximal activity independent from the regulatory SOS2/SOS3 complex. We demonstrated that the expression of TdSOS1 enhances salt tolerance of the transgenic Arabidopsis plants. In this study, we analyzed the response to H2O2-induced oxidative stress of the transgenic Arabidopsis expressing one of the two TdSOS1 forms. Firstly, we showed that the exogenous H2O2 treatment leads to an accumulation of SOS1 transcripts in leaves and roots of the durum wheat and also in the transgenic plants. These transgenic plants showed significant oxidative stress tolerance compared to control plants, especially the plants expressing the hyperactive form. This tolerance was manifested by high proline accumulation and low malonyldialdehyde (MDA), O2˙- and H2O2 contents. Furthermore, the activities of three essential ROS scavenging enzymes (SOD, CAT, and POD) were higher in the transgenic plants under oxidative stress, as compared to control plants. Taken together, these data suggested that TdSOS1 plays a crucial role in response to oxidative stress.
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Affiliation(s)
- Kaouthar Feki
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS)/University of Sfax, Route Sidi Mansour Km 6, B.P'1177', 3018, Sfax, Tunisia
| | - Sana Tounsi
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS)/University of Sfax, Route Sidi Mansour Km 6, B.P'1177', 3018, Sfax, Tunisia
| | - Khaled Masmoudi
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS)/University of Sfax, Route Sidi Mansour Km 6, B.P'1177', 3018, Sfax, Tunisia
- International center for Biosaline Agriculture (ICBA), P.O. Box 14660, Dubai, UAE
| | - Faiçal Brini
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS)/University of Sfax, Route Sidi Mansour Km 6, B.P'1177', 3018, Sfax, Tunisia.
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