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Lu HC, Huang CW, Mimura T, Sukma D, Chan MT. Temperature-Regulated Flowering Locus T-Like Gene Coordinates the Spike Initiation in Phalaenopsis Orchid. PLANT & CELL PHYSIOLOGY 2024; 65:405-419. [PMID: 38153763 DOI: 10.1093/pcp/pcad166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 12/18/2023] [Accepted: 12/20/2023] [Indexed: 12/29/2023]
Abstract
Phalaenopsis aphrodite can be induced to initiate spike growth and flowering by exposure to low ambient temperatures. However, the factors and mechanisms responsible for spike initiation in P. aphrodite remain largely unknown. In this study, we show that a repressor Flowing Locus T-like (FTL) gene, FTL, can act as a negative regulator of spike initiation in P. aphrodite. The mRNA transcripts of PaFTL are consistently high during high ambient temperature, thereby preventing premature spike initiation. However, during low ambient temperature, PaFTL expression falls while FT expression increases, allowing for spike initiation. Knock-down of PaFTL expression through virus-inducing gene silencing promoted spike initiation at 30/28°C. Moreover, PaFTL interacts with FLOWERING LOCUS D in a similar manner to FT to regulate downstream flowering initiation genes. Transgenic P. aphrodite plants exhibiting high expression of PaFTL do not undergo spike initiation, even when exposed to low ambient temperatures. These findings shed light on the flowering mechanisms in Phalaenopsis and provide new insights into how perennial plants govern spike initiation in response to temperature cues.
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Affiliation(s)
- Hsiang-Chia Lu
- Academia Sinica Biotechnology Center in Southern Taiwan, Agricultural Biotechnology Research Center, Academia Sinica, No. 100, Sec. 1, Guiren 13th Rd., Guiren Dist., Tainan 741, Taiwan
| | - Chiao-Wen Huang
- Academia Sinica Biotechnology Center in Southern Taiwan, Agricultural Biotechnology Research Center, Academia Sinica, No. 100, Sec. 1, Guiren 13th Rd., Guiren Dist., Tainan 741, Taiwan
| | - Tetsuro Mimura
- Graduate Program of Translational Agricultural Sciences, National Cheng Kung University and Academia Sinica, No. 1, Daxue Rd., East Dist., Taiwan 70101, Taiwan
| | - Dewi Sukma
- Department of Agronomy & Horticulture, Faculty of Agriculture, IPB University, Jl. Meranti, Dramaga Campus, Bogor, West Java 16680, Indonesia
| | - Ming-Tsair Chan
- Academia Sinica Biotechnology Center in Southern Taiwan, Agricultural Biotechnology Research Center, Academia Sinica, No. 100, Sec. 1, Guiren 13th Rd., Guiren Dist., Tainan 741, Taiwan
- Graduate Program of Translational Agricultural Sciences, National Cheng Kung University and Academia Sinica, No. 1, Daxue Rd., East Dist., Taiwan 70101, Taiwan
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Leng C, Hou M, Xing Y, Chen J. Perspective and challenges of mycorrhizal symbiosis in orchid medicinal plants. CHINESE HERBAL MEDICINES 2024; 16:172-179. [PMID: 38706832 PMCID: PMC11064572 DOI: 10.1016/j.chmed.2024.03.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Revised: 02/28/2024] [Accepted: 03/05/2024] [Indexed: 05/07/2024] Open
Abstract
The family Orchidaceae is of the most diverse taxon in the plant kingdom, and most of its members are highly valuable herbal medicines. Orchids have a unique mycorrhizal symbiotic relationship with specific fungi for carbohydrate and nutrient supplies in their whole lifecycle. The large-scale cultivation of the medicinal plant Gastodia elata is a successful example of using mycorrhizal symbiotic technology. In this review, we adopted G. elata and Dendrobium officinale as examples to describe the characteristics of orchid mycorrhiza and mycorrhizal benefits for host plants' growth and health (e.g. biotic and abiotic stress and secondary metabolite accumulation). The challenges in applying mycorrhizal technology to the cultivation of orchid medicinal plants in the future were also discussed. This review aims to serve as a theoretical guide for the cultivation of mycorrhizal technology in medicinal orchid plants.
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Affiliation(s)
- Chunyan Leng
- Key Laboratory of Bioactive Substances and Resource Utilization of Chinese Herbal Medicine, Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China
| | - Mengyan Hou
- Key Laboratory of Bioactive Substances and Resource Utilization of Chinese Herbal Medicine, Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China
| | - Yongmei Xing
- Key Laboratory of Bioactive Substances and Resource Utilization of Chinese Herbal Medicine, Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China
| | - Juan Chen
- Key Laboratory of Bioactive Substances and Resource Utilization of Chinese Herbal Medicine, Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China
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Tian F, Wang J, Ding F, Wang L, Yang Y, Bai X, Tan C, Liao X. Comparative transcriptomics and proteomics analysis of the symbiotic germination of Paphiopedilum barbigerum with Epulorhiza sp. FQXY019. Front Microbiol 2024; 15:1358137. [PMID: 38562471 PMCID: PMC10982344 DOI: 10.3389/fmicb.2024.1358137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Accepted: 03/06/2024] [Indexed: 04/04/2024] Open
Abstract
Introduction Paphiopedilum barbigerum is currently the rarest and most endangered species of orchids in China and has significant ornamental value. The mature seeds of P. barbigerum are difficult to germinate owing to the absence of an endosperm and are highly dependent on mycorrhizal fungi for germination and subsequent development. However, little is known about the regulation mechanisms of symbiosis and symbiotic germination of P. barbigerum seeds. Methods Herein, transcriptomics and proteomics were used to explore the changes in the P. barbigerum seeds after inoculation with (FQXY019 treatment group) or without (control group) Epulorhiza sp. FQXY019 at 90 days after germination. Results Transcriptome sequencing revealed that a total of 10,961 differentially expressed genes (DEGs; 2,599 upregulated and 8,402 downregulated) were identified in the control and FQXY019 treatment groups. These DEGs were mainly involved in carbohydrate, fatty acid, and amino acid metabolism. Furthermore, the expression levels of candidate DEGs related to nodulin, Ca2+ signaling, and plant lectins were significantly affected in P. barbigerum in the FQXY019 treatment groups. Subsequently, tandem mass tag-based quantitative proteomics was performed to recognize the differentially expressed proteins (DEPs), and a total of 537 DEPs (220 upregulated and 317 downregulated) were identified that were enriched in processes including photosynthesis, photosynthesis-antenna proteins, and fatty acid biosynthesis and metabolism. Discussion This study provides novel insight on the mechanisms underlying the in vitro seed germination and protocorm development of P. barbigerum by using a compatible fungal symbiont and will benefit the reintroduction and mycorrhizal symbiotic germination of endangered orchids.
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Affiliation(s)
- Fan Tian
- Guizhou Academy of Forestry, Guiyang, Guizhou, China
- Key Laboratory for Biodiversity Conservation in the Karst Mountain Area of Southwestern China, National Forestry and Grassland Administration, Guiyang, Guizhou, China
| | - Juncai Wang
- Guizhou Academy of Sciences, Guiyang, Guizhou, China
| | - Fangjun Ding
- Guizhou Academy of Forestry, Guiyang, Guizhou, China
- Key Laboratory for Biodiversity Conservation in the Karst Mountain Area of Southwestern China, National Forestry and Grassland Administration, Guiyang, Guizhou, China
| | - Lianhui Wang
- Guizhou Academy of Forestry, Guiyang, Guizhou, China
- Key Laboratory for Biodiversity Conservation in the Karst Mountain Area of Southwestern China, National Forestry and Grassland Administration, Guiyang, Guizhou, China
| | - Yanbing Yang
- Guizhou Academy of Forestry, Guiyang, Guizhou, China
- Key Laboratory for Biodiversity Conservation in the Karst Mountain Area of Southwestern China, National Forestry and Grassland Administration, Guiyang, Guizhou, China
| | - Xinxiang Bai
- College of Forestry, Guizhou University, Guiyang, Guizhou, China
| | - Chengjiang Tan
- Guizhou Maolan National Nature Reserve Administration, Libo, Guizhou, China
| | - Xiaofeng Liao
- Guizhou Academy of Sciences, Guiyang, Guizhou, China
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Kongkatitham V, Dehlinger A, Chaotham C, Likhitwitayawuid K, Böttcher C, Sritularak B. Diverse modulatory effects of bibenzyls from Dendrobium species on human immune cell responses under inflammatory conditions. PLoS One 2024; 19:e0292366. [PMID: 38300920 PMCID: PMC10833532 DOI: 10.1371/journal.pone.0292366] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Accepted: 09/18/2023] [Indexed: 02/03/2024] Open
Abstract
Dendrobium plants are widely used in traditional Chinese medicine. Their secondary metabolites such as bibenzyls and phenanthrenes show various pharmacological benefits such as immunomodulation and inhibitory effects on cancer cell growth. However, our previous study also showed that some of these promising compounds (i.e., gigantol and cypripedin) also induced the expression of inflammatory cytokines including TNF in human monocytes, and thus raising concerns about the use of these compounds in clinical application. Furthermore, the effects of these compounds on other immune cell populations, apart from monocytes, remain to be investigated. In this study, we evaluated immunomodulatory effects of seven known bibenzyl compounds purified from Dendrobium species in human peripheral blood mononuclear cells (PBMCs) that were stimulated with lipopolysaccharide (LPS). Firstly, using flow cytometry, moscatilin (3) and crepidatin (4) showed the most promising dose-dependent immunomodulatory effects among all seven bibenzyls, determined by significant reduction of TNF expression in LPS-stimulated CD14+ monocytes. Only crepidatin at the concentration of 20 μM showed a significant cytotoxicity, i.e., an increased cell death in late apoptotic state. In addition, deep immune profiling using high-dimensional single-cell mass cytometry (CyTOF) revealed broad effects of Dendrobium compounds on diverse immune cell types. Our findings suggest that to precisely evaluate therapeutic as well as adverse effects of active natural compounds, a multi-parameter immune profiling targeting diverse immune cell population is required.
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Affiliation(s)
- Virunh Kongkatitham
- Pharmaceutical Sciences and Technology Program, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok, Thailand
- Department of Pharmacognosy and Pharmaceutical Botany, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok, Thailand
| | - Adeline Dehlinger
- Experimental and Clinical Research Center, a Cooperation Between the Max Delbrück Center for Molecular Medicine in the Helmholtz Association and Charité – Universitätsmedizin Berlin, Berlin, Germany
| | - Chatchai Chaotham
- Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok, Thailand
| | - Kittisak Likhitwitayawuid
- Department of Pharmacognosy and Pharmaceutical Botany, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok, Thailand
| | - Chotima Böttcher
- Experimental and Clinical Research Center, a Cooperation Between the Max Delbrück Center for Molecular Medicine in the Helmholtz Association and Charité – Universitätsmedizin Berlin, Berlin, Germany
| | - Boonchoo Sritularak
- Department of Pharmacognosy and Pharmaceutical Botany, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok, Thailand
- Center of Excellence in Natural Products for Ageing and Chronic Diseases, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok, Thailand
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Tian L, An M, Wu M, Liu F, Zhang Y. Habitat ecological characteristics and soil fungal community structure of Paphiopedilum subgenus Brachypetalum Hallier (Orchidaceae) plants in Southwest China. PLANT SIGNALING & BEHAVIOR 2023; 18:2227365. [PMID: 37377110 DOI: 10.1080/15592324.2023.2227365] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2023] [Revised: 04/28/2023] [Accepted: 05/02/2023] [Indexed: 06/29/2023]
Abstract
Species of the subgenus Brachypetalum are the most primitive, most ornamental and most threatened group in the Orchid. This study revealed the ecological characteristics, soil nutrient characteristics and soil fungal community structure of habitats of the subgenus Brachypetalum in Southwest China. Lays a foundation for research on the wild populations and conservation Brachypetalum. The results showed that species of the subgenus Brachypetalum preferred a cool and humid environment, grew in scattered or aggregated form in narrow negative terrain, mainly in humic soil. The soil physical and chemical properties and soil enzyme activity indexes of the habitats were significantly different among different species, and the soil properties of different distribution points of the same species also varied greatly. There were significant differences in the soil fungal community structure among the habitats of different species. Basidiomycetes and ascomycetes were the main fungi in habitats of subgenus Brachypetalum species, and their relative abundance varied among different species. The functional groups of soil fungi were mainly symbiotic fungi and saprophytic fungi. LEfSe analysis found that there were different numbers and species of biomarkers in the habitats of subgenus Brachypetalum species, indicating that the habitat preference characteristics of each species in subgenus Brachypetalum were reflected in the fungal community. It was found that environmental factors had an impact on the changes in soil fungal communities in the habitats of subgenus Brachypetalum species, with climatic factors having the highest explanation rate (20.96%). Soil properties were significantly positively or negatively correlated with a variety of dominant soil fungal groups. Conclusions: The results of this study lay the foundation for the study of the habitat characteristics of wild populations of subgenus Brachypetalum and provides data to support in situ and ex situ conservation in the future.
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Affiliation(s)
- Li Tian
- Forestry College of Guizhou University, Guizhou University, Guiyang, China
- Research Center of Biodiversity and Nature Conservation, Guizhou University, Guiyang, China
| | - Mingtai An
- Forestry College of Guizhou University, Guizhou University, Guiyang, China
- Research Center of Biodiversity and Nature Conservation, Guizhou University, Guiyang, China
| | - Moxu Wu
- Forestry College of Guizhou University, Guizhou University, Guiyang, China
- Research Center of Biodiversity and Nature Conservation, Guizhou University, Guiyang, China
| | - Feng Liu
- Forestry College of Guizhou University, Guizhou University, Guiyang, China
- Research Center of Biodiversity and Nature Conservation, Guizhou University, Guiyang, China
| | - Yang Zhang
- Forestry College of Guizhou University, Guizhou University, Guiyang, China
- Research Center of Biodiversity and Nature Conservation, Guizhou University, Guiyang, China
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Rajanala A, Taylor IW, McCaskey E, Pierce C, Ligon J, Aydin E, Hunner C, Carmichael A, Eserman L, Coffee EED, Mijar A, Shah M, Benfey PN, Goldman DI. The rhizodynamics robot: Automated imaging system for studying long-term dynamic root growth. PLoS One 2023; 18:e0295823. [PMID: 38128010 PMCID: PMC10734993 DOI: 10.1371/journal.pone.0295823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2023] [Accepted: 11/30/2023] [Indexed: 12/23/2023] Open
Abstract
The study of plant root growth in real time has been difficult to achieve in an automated, high-throughput, and systematic fashion. Dynamic imaging of plant roots is important in order to discover novel root growth behaviors and to deepen our understanding of how roots interact with their environments. We designed and implemented the Generating Rhizodynamic Observations Over Time (GROOT) robot, an automated, high-throughput imaging system that enables time-lapse imaging of 90 containers of plants and their roots growing in a clear gel medium over the duration of weeks to months. The system uses low-cost, widely available materials. As a proof of concept, we employed GROOT to collect images of root growth of Oryza sativa, Hudsonia montana, and multiple species of orchids including Platanthera integrilabia over six months. Beyond imaging plant roots, our system is highly customizable and can be used to collect time- lapse image data of different container sizes and configurations regardless of what is being imaged, making it applicable to many fields that require longitudinal time-lapse recording.
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Affiliation(s)
- Aradhya Rajanala
- Department of Physics, Georgia Institute of Technology, Atlanta, GA, United States of America
| | - Isaiah W. Taylor
- Department of Biology, Duke University, Durham, NC, United States of America
| | - Erin McCaskey
- Department of Physics, Georgia Institute of Technology, Atlanta, GA, United States of America
| | - Christopher Pierce
- Department of Physics, Georgia Institute of Technology, Atlanta, GA, United States of America
| | - Jason Ligon
- Atlanta Botanical Garden, Atlanta, GA, United States of America
| | - Enes Aydin
- Department of Physics, Georgia Institute of Technology, Atlanta, GA, United States of America
| | - Carrie Hunner
- Atlanta Botanical Garden, Atlanta, GA, United States of America
| | | | - Lauren Eserman
- Atlanta Botanical Garden, Atlanta, GA, United States of America
| | | | - Anupam Mijar
- Department of Biology, Duke University, Durham, NC, United States of America
| | - Milan Shah
- Department of Biology, Duke University, Durham, NC, United States of America
| | - Philip N. Benfey
- Department of Biology, Duke University, Durham, NC, United States of America
| | - Daniel I. Goldman
- Department of Physics, Georgia Institute of Technology, Atlanta, GA, United States of America
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Chang H, Chen YT, Huang HE, Ger MJ. Overexpressing plant ferredoxin-like protein enhances photosynthetic efficiency and carbohydrates accumulation in Phalaenopsis. Transgenic Res 2023; 32:547-560. [PMID: 37851307 DOI: 10.1007/s11248-023-00370-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2023] [Accepted: 10/04/2023] [Indexed: 10/19/2023]
Abstract
Crassulacean acid metabolism (CAM) is one of three major models of carbon dioxide assimilation pathway with better water-use efficiency and slower photosynthetic efficiency in photosynthesis. Previous studies indicated that the gene of sweet pepper plant ferredoxin-like protein (PFLP) shows high homology to the ferredoxin-1(Fd-1) family that belongs to photosynthetic type Fd and involves in photosystem I. It is speculated that overexpressing pflp in the transgenic plant may enhance photosynthetic efficiency through the electron transport chain (ETC). To reveal the function of PFLP in photosynthetic efficiency, pflp transgenic Phalaenopsis, a CAM plant, was generated to analyze photosynthetic markers. Transgenic plants exhibited 1.2-folds of electron transport rate than that of wild type (WT), and higher CO2 assimilation rates up to 1.6 and 1.5-folds samples at 4 pm and 10 pm respectively. Enzyme activity of phosphoenolpyruvate carboxylase (PEPC) was increased to 5.9-folds in Phase III, and NAD+-linked malic enzyme (NAD+-ME) activity increased 1.4-folds in Phase IV in transgenic plants. The photosynthesis products were analyzed between transgenic plants and WT. Soluble sugars contents such as glucose, fructose, and sucrose were found to significantly increase to 1.2, 1.8, and 1.3-folds higher in transgenic plants. The starch grains were also accumulated up to 1.4-folds in transgenic plants than that of WT. These results indicated that overexpressing pflp in transgenic plants increases carbohydrates accumulation by enhancing electron transport flow during photosynthesis. This is the first evidence for the PFLP function in CAM plants. Taken altogether, we suggest that pflp is an applicable gene for agriculture application that enhances electron transport chain efficiency during photosynthesis.
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Affiliation(s)
- Hsiang Chang
- Department of Biotechnology and Pharmaceutical Technology, Yuanpei University of Medical Technology, Hsinchu, 30015, Taiwan
| | - Yen-Ting Chen
- Institute of Biotechnology, National University of Kaohsiung, Kaohsiung, 81148, Taiwan
| | - Hsiang-En Huang
- Department of Life Sciences, National Taitung University, Taitung, 95002, Taiwan
| | - Mang-Jye Ger
- Department of Life Sciences, National University of Kaohsiung, Kaohsiung, 81148, Taiwan.
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Zhou R, Zhao G, Zheng S, Xie S, Lu C, Liu S, Wang Z, Niu J. Comprehensive Functional Analysis of the bZIP Family in Bletilla striata Reveals That BsbZIP13 Could Respond to Multiple Abiotic Stresses. Int J Mol Sci 2023; 24:15202. [PMID: 37894883 PMCID: PMC10607107 DOI: 10.3390/ijms242015202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Revised: 10/07/2023] [Accepted: 10/11/2023] [Indexed: 10/29/2023] Open
Abstract
Basic leucine zipper (bZIP) transcription factors (TFs) are one of the largest families involved in plant physiological processes such as biotic and abiotic responses, growth, and development, etc. In this study, 66 members of the bZIP family were identified in Bletilla striata, which were divided into 10 groups based on their phylogenetic relationships with AtbZIPs. A structural analysis of BsbZIPs revealed significant intron-exon differences among BsbZIPs. A total of 63 bZIP genes were distributed across 16 chromosomes in B. striata. The tissue-specific and germination stage expression patterns of BsbZIPs were based on RNA-seq. Stress-responsive expression analysis revealed that partial BsbZIPs were highly expressed under low temperatures, wounding, oxidative stress, and GA treatments. Furthermore, subcellular localization studies indicated that BsbZIP13 was localized in the nucleus. Yeast two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) assays suggested that BsbZIP13 could interact with multiple BsSnRK2s. The results of this study provide insightful data regarding bZIP TF as one of the stress response regulators in B. striata, while providing a theoretical basis for transgenic and functional studies of the bZIP gene family in B. striata.
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Affiliation(s)
- Ru Zhou
- National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, Xi’an 710119, China; (R.Z.); (G.Z.); (S.Z.); (S.X.); (C.L.); (S.L.)
- Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, Shaanxi Normal University, Xi’an 710119, China
- College of Life Sciences, Shaanxi Normal University, Xi’an 710119, China
| | - Guangming Zhao
- National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, Xi’an 710119, China; (R.Z.); (G.Z.); (S.Z.); (S.X.); (C.L.); (S.L.)
- Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, Shaanxi Normal University, Xi’an 710119, China
- College of Life Sciences, Shaanxi Normal University, Xi’an 710119, China
| | - Siting Zheng
- National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, Xi’an 710119, China; (R.Z.); (G.Z.); (S.Z.); (S.X.); (C.L.); (S.L.)
- Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, Shaanxi Normal University, Xi’an 710119, China
- College of Life Sciences, Shaanxi Normal University, Xi’an 710119, China
| | - Siyuan Xie
- National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, Xi’an 710119, China; (R.Z.); (G.Z.); (S.Z.); (S.X.); (C.L.); (S.L.)
- Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, Shaanxi Normal University, Xi’an 710119, China
- College of Life Sciences, Shaanxi Normal University, Xi’an 710119, China
| | - Chan Lu
- National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, Xi’an 710119, China; (R.Z.); (G.Z.); (S.Z.); (S.X.); (C.L.); (S.L.)
- Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, Shaanxi Normal University, Xi’an 710119, China
- College of Life Sciences, Shaanxi Normal University, Xi’an 710119, China
| | - Shuai Liu
- National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, Xi’an 710119, China; (R.Z.); (G.Z.); (S.Z.); (S.X.); (C.L.); (S.L.)
- Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, Shaanxi Normal University, Xi’an 710119, China
- College of Life Sciences, Shaanxi Normal University, Xi’an 710119, China
| | - Zhezhi Wang
- National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, Xi’an 710119, China; (R.Z.); (G.Z.); (S.Z.); (S.X.); (C.L.); (S.L.)
- Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, Shaanxi Normal University, Xi’an 710119, China
- College of Life Sciences, Shaanxi Normal University, Xi’an 710119, China
| | - Junfeng Niu
- National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, Xi’an 710119, China; (R.Z.); (G.Z.); (S.Z.); (S.X.); (C.L.); (S.L.)
- Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, Shaanxi Normal University, Xi’an 710119, China
- College of Life Sciences, Shaanxi Normal University, Xi’an 710119, China
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Wang X, Peng P, Bai M, Bai W, Zhang S, Feng Y, Wang J, Tang Y. Impacts of physiological characteristics and human activities on the species distribution models of orchids taking the Hengduan Mountains as a case. Ecol Evol 2023; 13:e10566. [PMID: 37791293 PMCID: PMC10542477 DOI: 10.1002/ece3.10566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 09/06/2023] [Accepted: 09/14/2023] [Indexed: 10/05/2023] Open
Abstract
The biogeography research of orchids through species distribution models (SDMs), a vital tool in the biogeography field, is critical to understanding the fundamental geographic distribution patterns and identifying conservation priorities. The correspondence between species occurrence and environmental information is crucial to the model's performance. However, ecological preferences unique to different orchid species, such as their life forms, are often overlooked during the modeling process. This oversight can introduce bias and increase model uncertainty. Additionally, human activities, as an important potential predictor, have not been quantified in any orchid SDMs. Taking the Hengduan Mountains as an example, we preprocessed all orchid species' occurrences based on physiological characteristics. Choosing five spatial factors related to human activities to quantify the interference and enter into models as HI factor. Using different modeling methods (GLM, MaxEnt, and RF) and evaluation indices (AUC, TSS, and Kappa), diverse modeling strategies have been constructed in the study. A double-ranking method has been adopted to select the critical orchid distribution regions. The results showed that classification models based on physiological characteristics significantly improved the model's accuracy while adding the HI factor had the same effect but the absence of enough significance. Suitability maps indicated that highly heterogeneous mountainous areas were vital for the distribution of orchids in the Hengduan Mountains. Different distribution patterns and critical regions existed between various orchid life forms geographically - terrestrial orchids were dominant in the mountain, and mycoherterophical orchids were primarily located in the north, more influenced by vegetation and temperature. Critical regions of epiphytic orchids were in the south due to a greater dependence on precipitation and temperature. These studies are informative for understanding the orchids' geographic distribution patterns in the Hengduan Mountains, promoting conservation and providing references for similar research beyond orchids.
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Affiliation(s)
- Xue‐Man Wang
- College of Earth SciencesChengdu University of TechnologyChengduChina
| | - Pei‐Hao Peng
- College of Earth SciencesChengdu University of TechnologyChengduChina
| | - Mao‐Yang Bai
- College of Earth SciencesChengdu University of TechnologyChengduChina
| | - Wen‐Qian Bai
- College of Earth SciencesChengdu University of TechnologyChengduChina
| | - Shi‐Qi Zhang
- College of Earth SciencesChengdu University of TechnologyChengduChina
| | - Yu Feng
- College of Earth SciencesChengdu University of TechnologyChengduChina
| | - Juan Wang
- College of Tourism and Urban‐rural PlanningChengdu University of TechnologyChengduChina
| | - Ying Tang
- College of Tourism and Urban‐rural PlanningChengdu University of TechnologyChengduChina
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Li X, Hu H, Ren Q, Wang M, Du Y, He Y, Wang Q. Comparative analysis of endophyte diversity of Dendrobium officinale lived on rock and tree. PLANT BIOTECHNOLOGY (TOKYO, JAPAN) 2023; 40:145-155. [PMID: 38264473 PMCID: PMC10804140 DOI: 10.5511/plantbiotechnology.23.0208a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Accepted: 02/08/2023] [Indexed: 01/25/2024]
Abstract
Dendrobium officinale usually lives on rock or tree, but their endophyte diversity has not yet been fully revealed? In this study, high-throughput sequencing technology was used to investigate the endophyte diversity of the roots of D. officinale lived on tree (Group 1-3, arboreal type) and rock (Group 4, lithophytic type). The results showed that their composition of endophytic fungi and bacteria were similar at phylum level, while their relative abundance were different. Their taxa composition and abundance of endophytes differed significantly among groups at the genus level. Alpha diversity of endophytic fungi of lithophytic type was higher than those from arboreal type, while there was no advantage in endophytic bacteria. Beta diversity revealed that the endophytic fungi tended to cluster in each group, but the endophytic bacteria were dispersed among the groups. LEfSe analysis found that the numbers of predicted endophyte biomarkers of lithophytic type were more than arboreal types at genus level, and the biomarkers varied among groups. Microbial network analysis revealed similarities and differences in the taxa composition and abundance of shared and special endophytes in each group. These results suggested that the root endophytes of lithophytic and arboreal D. officinale differed in diversity.
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Affiliation(s)
- Xiaolan Li
- Microbial Resources and Drug Development Key Laboratory of Guizhou Tertiary Institution, Life Sciences Institute, School of Stomatology, Zunyi Medical University, Zunyi 563000, China
| | - Huan Hu
- Microbial Resources and Drug Development Key Laboratory of Guizhou Tertiary Institution, Life Sciences Institute, School of Stomatology, Zunyi Medical University, Zunyi 563000, China
| | - Qunli Ren
- Microbial Resources and Drug Development Key Laboratory of Guizhou Tertiary Institution, Life Sciences Institute, School of Stomatology, Zunyi Medical University, Zunyi 563000, China
| | - Miao Wang
- Microbial Resources and Drug Development Key Laboratory of Guizhou Tertiary Institution, Life Sciences Institute, School of Stomatology, Zunyi Medical University, Zunyi 563000, China
| | - Yimei Du
- School of Pharmacy, Zunyi Medical University, Zunyi 563000, China
| | - Yuqi He
- School of Pharmacy, Zunyi Medical University, Zunyi 563000, China
- Key Laboratory of Basic Pharmacology of Ministry of Education and Joint International Research Laboratory of Ethnomedicine of Ministry of Education, Zunyi Medical University, Zunyi 563000, China
| | - Qian Wang
- Microbial Resources and Drug Development Key Laboratory of Guizhou Tertiary Institution, Life Sciences Institute, School of Stomatology, Zunyi Medical University, Zunyi 563000, China
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11
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Zhang W, Dong XM, Zhang YW, Fan ZX, Zhang SB. Age-related differences in physiological and metabolic responses of Pleione aurita (Orchidaceae) pseudobulbs to drought stress and recovery. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 197:107655. [PMID: 36989992 DOI: 10.1016/j.plaphy.2023.107655] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 02/16/2023] [Accepted: 03/18/2023] [Indexed: 06/19/2023]
Abstract
The pseudobulb is a storage organ for water and nutrients that plays a crucial role in the growth and survival of epiphytic orchids. However, the role of water and metabolites in pseudobulb during adaptation to environmental stress are rarely detected through control experiments. In the present study, water-related physiological traits and metabolite changes in the pseudobulbs at the flowering stage and full leaf expansion stage for Pleione aurita were investigated after drought stress and recovery treatments. We found that the composition of non-structural carbohydrates (starch vs. soluble sugar) varied over the lifetime of pseudobulbs, and older pseudobulbs stored more water, whereas younger pseudobulbs stored more dry matter. When plants were subjected to drought stress and subsequent recovery, multiple metabolites in the pseudobulbs including non-structural carbohydrates, flavonoids, phenolic acids, as well as amino acids and their derivatives responded positively to these water level fluctuations. For those metabolites that differently accumulated in both stress and recovery processes, old pseudobulbs contained a higher number of these key metabolites than did the connected younger pseudobulbs. In addition, young and old pseudobulbs use different metabolic pathways to both respond and recover to drought. These results indicate that orchid pseudobulbs cope with water level fluctuations by mobilizing metabolite reserves and that pseudobulbs of different ages exhibit different physiological and metabolic responses to drought stress. These findings broadens our understanding of the role pseudobulbs play in the survival of orchids growing in epiphytic habitats.
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Affiliation(s)
- Wei Zhang
- Key Laboratory of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China; Yunnan Key Laboratory for Wild Plant Resources, Kunming, Yunnan, 650201, China
| | - Xiu-Mei Dong
- Key Laboratory of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China; Yunnan Key Laboratory for Wild Plant Resources, Kunming, Yunnan, 650201, China
| | - Yu-Wen Zhang
- Key Laboratory of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China; Yunnan Key Laboratory for Wild Plant Resources, Kunming, Yunnan, 650201, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Ze-Xin Fan
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, 666303, China.
| | - Shi-Bao Zhang
- Key Laboratory of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China; Yunnan Key Laboratory for Wild Plant Resources, Kunming, Yunnan, 650201, China.
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12
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Morphological and Physio-Chemical Responses to PEG-Induced Water Stress in Vanilla planifolia and V. pompona Hybrids. Int J Mol Sci 2023; 24:ijms24054690. [PMID: 36902119 PMCID: PMC10003678 DOI: 10.3390/ijms24054690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2023] [Revised: 02/17/2023] [Accepted: 02/22/2023] [Indexed: 03/04/2023] Open
Abstract
Vanilla planifolia is an orchid of cultural and economic value. However, its cultivation in many tropical countries is threatened by water stress. In contrast, V. pompona is a species that is tolerant of prolonged periods of drought. Due to the need for plants' resistant to water stress, the use of hybrids of these two species is considered. Therefore, the objective of this study was to evaluate the morphological and physio-chemical responses of in vitro vanilla seedlings of the parental genotype V. planifolia, and the hybrids V. planifolia × V. pompona and V. pompona × V. planifolia, which were then exposed over five weeks to polyethylene glycol-induced water stress (-0.49 mPa). Stem and root length, relative growth rate, number of leaves and roots, stomatal conductance, specific leaf area, and leaf water content were determined. Metabolites potentially associated with the response to water stress were identified in leaves, through untargeted and targeted metabolomics. Both hybrids exhibited a smaller decrease in the morphophysiological responses compared to V. planifolia and exhibited an enrichment of metabolites such as carbohydrates, amino acids, purines, phenols, and organic acids. Hybrids of these two species are considered as a potential alternative to the traditional cultivation of vanilla to face drought in a global warming scenario.
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Zhang Z, Li J, Suddee S, Bouamanivong S, Averyanov LV, Gale SW. Exploring island syndromes: Variable matrix permeability in Phalaenopsis pulcherrima (Orchidaceae), a specialist lithophyte of tropical Asian inselbergs. FRONTIERS IN PLANT SCIENCE 2023; 14:1097113. [PMID: 36890904 PMCID: PMC9986494 DOI: 10.3389/fpls.2023.1097113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/13/2022] [Accepted: 01/19/2023] [Indexed: 06/18/2023]
Abstract
INTRODUCTION Plants confined to island-like habitats are hypothesised to possess a suite of functional traits that promote on-spot persistence and recruitment, but this may come at the cost of broad-based colonising potential. Ecological functions that define this island syndrome are expected to generate a characteristic genetic signature. Here we examine genetic structuring in the orchid Phalaenopsis pulcherrima, a specialist lithophyte of tropical Asian inselbergs, both at the scale of individual outcrops and across much of its range in Indochina and on Hainan Island, to infer patterns of gene flow in the context of an exploration of island syndrome traits. METHODS We sampled 323 individuals occurring in 20 populations on 15 widely scattered inselbergs, and quantified genetic diversity, isolation-by-distance and genetic structuring using 14 microsatellite markers. To incorporate a temporal dimension, we inferred historical demography and estimated direction of gene flow using Bayesian approaches. RESULTS We uncovered high genotypic diversity, high heterozygosity and low rates of inbreeding, as well as strong evidence for the occurrence of two genetic clusters, one comprising the populations of Hainan Island and the other those of mainland Indochina. Connectivity was greater within, rather than between the two clusters, with the former unequivocally supported as ancestral. DISCUSSION Despite a strong capacity for on-spot persistence conferred by clonality, incomplete self-sterility and an ability to utilize multiple magnet species for pollination, our data reveal that P. pulcherrima also possesses traits that promote landscape-scale gene flow, including deceptive pollination and wind-borne seed dispersal, generating an ecological profile that neither fully conforms to, nor fully contradicts, a putative island syndrome. A terrestrial matrix is shown to be significantly more permeable than open water, with the direction of historic gene flow indicating that island populations can serve as refugia for postglacial colonisation of continental landmasses by effective dispersers.
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Affiliation(s)
- Zhe Zhang
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants (Hainan University), Ministry of Education, College of Forestry, Hainan University, Haikou, China
- Key Laboratory of Germplasm Resources of Tropical Special Ornamental Plants of Hainan Province, College of Forestry, Hainan University, Haikou, China
| | - Jihong Li
- Flora Conservation Department, Kadoorie Farm & Botanic Garden, Tai Po, Hong Kong, China
| | - Somran Suddee
- Forest Herbarium, Department of National Parks, Wildlife and Plant Conservation, Chatuchak, Bangkok, Thailand
| | - Somsanith Bouamanivong
- Biotechnology and Ecology Institute, Ministry of Science and Technology, Vientiane, Laos
| | - Leonid V. Averyanov
- Komarov Botanical Institute, Russian Academy of Sciences, St. Petersburg, Russia
| | - Stephan W. Gale
- Flora Conservation Department, Kadoorie Farm & Botanic Garden, Tai Po, Hong Kong, China
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Genome-Wide Identification Analysis of the R2R3-MYB Transcription Factor Family in Cymbidium sinense for Insights into Drought Stress Responses. Int J Mol Sci 2023; 24:ijms24043235. [PMID: 36834646 PMCID: PMC9959677 DOI: 10.3390/ijms24043235] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Revised: 02/01/2023] [Accepted: 02/02/2023] [Indexed: 02/09/2023] Open
Abstract
Cymbidium sinense represents a distinctive Orchidaceae plant that is more tolerant than other terrestrial orchids. Studies have shown that many members of the MYB transcription factor (TF) family, especially the R2R3-MYB subfamily, are responsive to drought stress. This study identified 103 CsMYBs; phylogenetic analysis classified these genes into 22 subgroups with Arabidopsis thaliana. Structural analysis showed that most CsMYB genes contained the same motifs, three exons and two introns, and showed a helix-turn-helix 3D structure in each R repeat. However, the members of subgroup 22 contained only one exon and no intron. Collinear analysis revealed that C. sinense had more orthologous R2R3-MYB genes with wheat than A. thaliana and rice. Ka/Ks ratios indicated that most CsMYB genes were under purifying negative selection pressure. Cis-acting elements analysis revealed that drought-related elements were mainly focused on subgroups 4, 8, 18, 20, 21, and 22, and Mol015419 (S20) contained the most. The transcriptome analysis results showed that expression patterns of most CsMYB genes were upregulated in leaves in response to slight drought stress and downregulated in roots. Among them, members in S8 and S20 significantly responded to drought stress in C. sinense. In addition, S14 and S17 also participated in these responses, and nine genes were selected for the real-time reverse transcription quantitative PCR (RT-qPCR) experiment. The results were roughly consistent with the transcriptome. Our results, thus, provide an important contribution to understanding the role of CsMYBs in stress-related metabolic processes.
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15
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Ai YY, Liu Q, Hu HX, Shen T, Mo YX, Wu XF, Li JL, Dossa GG, Song L. Terrestrial and epiphytic orchids exhibit different diversity and distribution patterns along an elevation gradient of Mt. Victoria, Myanmar. Glob Ecol Conserv 2023. [DOI: 10.1016/j.gecco.2023.e02408] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/13/2023] Open
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Ramírez-Martínez A, Ticktin T, Mondragon D. Host tree species effects on long-term persistence of epiphytic orchid populations. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.1059136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
The destinies of epiphytic orchids (about 70% of all orchids) are linked to their host trees. However, there is little information on if differences in host trees characteristics can affect the long-term persistence of orchid populations, and how this might vary under different climatic conditions. We compared the population dynamics of two epiphytic orchid species, Alamania punicea and Oncidium brachyandrum growing on two host trees with contrasting leaf phenologies: the deciduous Quercus martinezii and the semideciduous Q. rugosa, over 3 years with varying levels of rainfall, in a montane tropical oak forest in Oaxaca, Mexico. Using data from > 500 individuals growing on 63 host trees, we applied linear mixed effects models, Integral Projection Models, and Life Table Response Experiments to identify the effects of host tree on orchid vital rates and population growth rates. For both orchid species, survival and growth did not differ between host species during wettest year. However, during the driest year both vital rates were higher on the semi-deciduous host Q. rugosa than on the deciduous Q. martinezii. Host species did not affect fecundity for A. punicea, but for O. brachyandrum fecundity was higher on the deciduous host. For A. punicea, λ values were similar between hosts during the wettest and intermediate years, but significantly lower (Δ λ = 0.28) on the deciduous than on the semi-deciduous host during the driest year. This was due primarily to lower survival on the deciduous host. For O. brachyandrum, λ was slightly higher (Δ λ = 0.03) on the deciduous than the semideciduous host during the wettest year, due to higher growth and reproduction. However, during the intermediate and driest years, λ values were significantly higher on the semi-deciduous than on the deciduous host (Δ λ = 0.13 and 0.15, respectively). This was due to higher survival and growth. A. punicea populations appear more vulnerable to dry conditions than O. brachyandrum, likely due to its smaller pseudobulbs, and hence lower water-storing capacity. Our results show that host tree species can both influence the vital rates and the long-term dynamics of orchid populations, and these effects vary across orchids species and over time. Our results highlight the importance of maintaining a diversity of host trees to ensure long-term population persistence.
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Sherpa R, Devadas R, Bolbhat SN, Nikam TD, Penna S. Gamma Radiation Induced In-Vitro Mutagenesis and Isolation of Mutants for Early Flowering and Phytomorphological Variations in Dendrobium 'Emma White'. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11223168. [PMID: 36432897 PMCID: PMC9697006 DOI: 10.3390/plants11223168] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 11/11/2022] [Accepted: 11/15/2022] [Indexed: 05/31/2023]
Abstract
In vitro mutagenesis offers a feasible approach for developing new orchid cultivars through genetic manipulation. In the present study, protocorm-like bodies (PLBs) were exposed to gamma rays (10, 20, 40, 60, 80 Gy) to study in vitro growth responses and induction of mutants in Dendrobium ‘Emma White’. Both proliferation and regeneration of PLBs decreased progressively with increasing doses, except for a significantly enhanced growth response at 10 Gy. The optimal dose of gamma radiation for mutagenesis was found in the range 10 to 25 Gy based on the growth reduction curve. Analysis using a high-throughput cell analyzer revealed a significant reduction in nuclear DNA content at > 40 Gy doses. At 10 Gy treatment, the growth attributes, such as root length, plant height and leaf number, were significantly increased by 36%, 26% and 20%, respectively, compared to the control. This increase was significant over other tested doses as well. Testing of random amplified polymorphic DNA markers revealed the presence of detectable polymorphism among gamma mutant plantlets with a polymorphism information content value at 0.41. The gamma-ray-induced earliness in flower development was observed within 294 days post ex vitro growth of 10 Gy mutant compared to the control plants flowered after 959 days. Our results highlight the significance of gamma radiation in inducing enhanced growth, morphological variations and early floral initiation in Dendrobium, providing a basic framework for mutation breeding and improvement of orchids.
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Affiliation(s)
- Rubina Sherpa
- Department of Botany, Annasaheb Awate College, Manchar 410503, India
- Indian Council of Agricultural Research-National Research Centre on Orchids, Pakyong 737106, India
| | - Ramgopal Devadas
- Indian Council of Agricultural Research-National Research Centre on Orchids, Pakyong 737106, India
| | | | | | - Suprasanna Penna
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai 400085, India
- Amity Institute of Biotechnology, Amity University Mumbai, Mumbai 410206, India
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Zhang J, Zhu Y, Si J, Wu L. Metabolites of medicine food homology-derived endophytic fungi and their activities. Curr Res Food Sci 2022; 5:1882-1896. [PMID: 36276242 PMCID: PMC9579210 DOI: 10.1016/j.crfs.2022.10.006] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 09/08/2022] [Accepted: 10/06/2022] [Indexed: 11/04/2022] Open
Abstract
Medicine food homology (MFH) substances not only provide essential nutrients as food but also have corresponding factors that can prevent and help treat nutritional imbalances, chronic disease, and other related issues. Endophytic fungi associated with plants have potential for use in drug discovery and food therapy. However, the endophytic fungal metabolites from MFH plants and their effects have been overlooked. Therefore, this review focuses on the various biological activities of 108 new metabolites isolated from 53 MFH-derived endophytic fungi. The paper explores the potential nutritional and medicinal value of metabolites of MFH-derived endophytic fungi for food and medical applications. This research is important for the future development of effective, safe, and nontoxic therapeutic nutraceuticals for the prevention and treatment of human diseases.
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Liu S, Lu C, Jiang G, Zhou R, Chang Y, Wang S, Wang D, Niu J, Wang Z. Comprehensive functional analysis of the PYL-PP2C-SnRK2s family in Bletilla striata reveals that BsPP2C22 and BsPP2C38 interact with BsPYLs and BsSnRK2s in response to multiple abiotic stresses. FRONTIERS IN PLANT SCIENCE 2022; 13:963069. [PMID: 36035678 PMCID: PMC9404246 DOI: 10.3389/fpls.2022.963069] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Accepted: 07/27/2022] [Indexed: 06/15/2023]
Abstract
As the core regulation network for the abscisic acid (ABA) signaling pathway, the PYL-PP2C-SnRK2s family commonly exists in many species. For this study, a total of 9 BsPYLs, 66 BsPP2Cs, and 7 BsSnRK2s genes were identified based on the genomic databases of Bletilla striata, which were classified into 3, 10, and 3 subgroups, respectively. Basic bioinformatics analysis completed, including the physicochemical properties of proteins, gene structures, protein motifs and conserved domains. Multiple cis-acting elements related to stress responses and plant growth were found in promoter regions. Further, 73 genes were localized on 16 pseudochromosomes and 29 pairs of paralogous genes were found via intraspecific collinearity analysis. Furthermore, tissue-specific expression was found in different tissues and germination stages. There were two BsPYLs, 10 BsPP2Cs, and four BsSnRK2 genes that exhibited a difference in response to multiple abiotic stresses. Moreover, subcellular localization analysis revealed six important proteins BsPP2C22, BsPP2C38, BsPP2C64, BsPYL2, BsPYL8, and BsSnRK2.4 which were localized in the nucleus and plasma membrane. Finally, yeast two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) assays suggested that BsPP2C22 and BsPP2C38 could interact with multiple BsPYLs and BsSnRK2s proteins. This study systematically reported on the identification and characterization of the PYL-PP2C-SnRK2s family in B. striata, which provided a conceptual basis for deep insights into the functionality of ABA core signal pathways in Orchidaceae.
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Burkhan H, Rajan KS, Appalasamy S, Poobathy R, Chew BL, Mariappan V, Subramaniam S. Effect of Cryopreservation Method Supported with Biochemical Analyses in the Axillary Bud of Jewel Orchid, Ludisia discolor. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11070879. [PMID: 35406859 PMCID: PMC9002730 DOI: 10.3390/plants11070879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Revised: 03/10/2022] [Accepted: 03/10/2022] [Indexed: 05/04/2023]
Abstract
This study investigated conserving an endangered terrestrial jewel orchid Ludisia discolor, using in vitro grown axillary buds. Excised segments of axillary buds (4-5 mm in length) were precultured on a modified Murashige and Skoog (MS) medium supplemented with 0.2 M sucrose for 24 h and osmoprotected in a loading solution for 20 min. Then, axillary buds were dehydrated in plant vitrification solution 2 (PVS2) for 10 min at 0 °C and incubated in liquid nitrogen for 1 h. Subsequently, axillary buds were rewarmed rapidly by dilution solution and transferred to a growth recovery medium supplemented with 0.05 µM melatonin, which led to an improved survival chance (16.67%) for cryopreserved L. discolor. The osmotic stress and the overproduction of reactive oxygen species (ROS) during cryopreservation stages may result in cryoinjuries and poor survival as increased levels of proline (5.51 µmol/g), catalase (85.64 U/g), peroxidase (565.37 U/g), and ascorbate peroxidase activities (12.19 U/g) were detected after dehydration, preculture, rewarming, and loading stage, respectively. Results obtained from this study indicate that further experimental designs which apply different PVS and exogenous antioxidants are needed for improved survival and regrowth of L. discolor.
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Affiliation(s)
- Hazirah Burkhan
- School of Biological Sciences, Universiti Sains Malaysia (USM), Georgetown 11800, Penang, Malaysia
| | - Kirutika Selva Rajan
- School of Biological Sciences, Universiti Sains Malaysia (USM), Georgetown 11800, Penang, Malaysia
| | - Suganthi Appalasamy
- Department of Natural Resource and Sustainability, Faculty of Earth Science, Universiti Malaysia Kelantan (UMK), Locked Bag No. 100, Jeli 17600, Kelantan, Malaysia
| | - Ranjetta Poobathy
- School of Biological Sciences, Quest International University (QUIP), Ipoh 30250, Perak, Malaysia
| | - Bee Lynn Chew
- School of Biological Sciences, Universiti Sains Malaysia (USM), Georgetown 11800, Penang, Malaysia
| | - Vanitha Mariappan
- Centre of Toxicology and Health Risk Studies (CORE), Faculty of Health Sciences, Universiti Kebangsaan Malaysia (UKM), Kuala Lumpur 50300, Federal Territory of Kuala Lumpur, Malaysia
| | - Sreeramanan Subramaniam
- School of Biological Sciences, Universiti Sains Malaysia (USM), Georgetown 11800, Penang, Malaysia
- National Poison Centre, Universiti Sains Malaysia (USM), Georgetown 11800, Penang, Malaysia
- School of Chemical Engineering Technology, Universiti Malaysia Perlis (UNIMAP), Arau 02600, Perlis, Malaysia
- Centre for Chemical Biology, Universiti Sains Malaysia (USM), Bayan Lepas 11900, Penang, Malaysia
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Tejeda-Sartorius O, Soto-Hernández RM, San Miguel-Chávez R, Trejo-Téllez LI, Caamal-Velázquez H. Endogenous Hormone Profile and Sugars Display Differential Distribution in Leaves and Pseudobulbs of Laelia anceps Plants Induced and Non-Induced to Flowering by Exogenous Gibberellic Acid. PLANTS 2022; 11:plants11070845. [PMID: 35406825 PMCID: PMC9003143 DOI: 10.3390/plants11070845] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/25/2021] [Revised: 02/15/2022] [Accepted: 03/17/2022] [Indexed: 12/04/2022]
Abstract
A profile of endogenous hormones and sugars in leaves and pseudobulbs of Laelia anceps subsp. anceps (Orchidaceae) plants induced and non-induced to flowering by the effect of different doses of exogenous gibberellic acid (GA3), considering the current and back growth structures (CGS and BGS), were investigated. A factorial experiment with five doses of GA3 and two growth structures was designed. Adult plants with undifferentiated vegetative buds were selected and sprayed with doses of 0, 400, 600, 800, and 1000 mg GA3 L−1. The main results showed a strong interaction between GA3 dose and growth structures, which promoted the highest kinetin (KIN) concentration in CGS. Exogenous GA3 increased endogenous GA3 in leaves and pseudobulbs induced (I-Leaf and I-PSB) and non-induced (NI-Leaf and NI-PSB) to flowering. For sugar concentration, the 400 mg L−1 GA3 dose promotes significant interaction with the CGS in NI-PSB. In general, the hormone profile revealed opposite balances of endogenous hormone concentrations for KIN, zeatin (ZEA), trans-zeatin (T-ZEA), indoleacetic acid (IAA), indole-3-butyric acid (IBA) and GA3, not only for growth structures but also for vegetative organs analyzed, depending on whether the plants were induced or not induced to flowering, with the highest concentration of endogenous hormones in pseudobulbs. Likewise, different sugar concentration balances were observed. These balances of both endogenous hormones and sugars are likely to be involved in the flowering of L. anceps.
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Affiliation(s)
- Olga Tejeda-Sartorius
- Campus Montecillo, College of Postgraduates in Agricultural Sciences, Texcoco 56230, Mexico; (R.M.S.-H.); (R.S.M.-C.); (L.I.T.-T.)
- Correspondence:
| | - Ramón Marcos Soto-Hernández
- Campus Montecillo, College of Postgraduates in Agricultural Sciences, Texcoco 56230, Mexico; (R.M.S.-H.); (R.S.M.-C.); (L.I.T.-T.)
| | - Rubén San Miguel-Chávez
- Campus Montecillo, College of Postgraduates in Agricultural Sciences, Texcoco 56230, Mexico; (R.M.S.-H.); (R.S.M.-C.); (L.I.T.-T.)
| | - Libia Iris Trejo-Téllez
- Campus Montecillo, College of Postgraduates in Agricultural Sciences, Texcoco 56230, Mexico; (R.M.S.-H.); (R.S.M.-C.); (L.I.T.-T.)
| | - Humberto Caamal-Velázquez
- Campus Campeche, College of Postgraduates in Agricultural Sciences, Champotón 24450, Campeche, Mexico;
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22
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Orchidaceae-Derived Anticancer Agents: A Review. Cancers (Basel) 2022; 14:cancers14030754. [PMID: 35159021 PMCID: PMC8833831 DOI: 10.3390/cancers14030754] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2021] [Revised: 01/28/2022] [Accepted: 01/28/2022] [Indexed: 02/06/2023] Open
Abstract
Simple Summary Orchids are commonly used in folk medicine for the treatment of infections and tumors but little is known about the actual chemical composition of these plants and their anticancer properties. In this paper, the most recent literature on orchid-derived bioactive substances with anticancer properties is reviewed. According to the published data, numerous species of orchids contain potential antitumor chemicals. Still, a relatively insignificant number of species of orchids have been tested for their bioactive properties and most of those studies were on Asian taxa. Broader research, ’including American and African species, as well as the correct identification of samples, is essential for evaluating the usefulness of orchids as a plant family with huge anticancer potential. Abstract Species of orchids, which belong to the largest family of flowering plants, are commonly used in folk medicine for the treatment of infections and tumors. However, little is known about the actual chemical composition of these plants and their anticancer properties. In this paper, the most recent literature on orchid-derived bioactive substances with anticancer properties is reviewed. For the assessment, previous papers on the anticancer activity of Orchidaceae published since 2015 were considered. The papers were found by exploring electronic databases. According to the available data, many species of orchids contain potential antitumor chemicals. The bioactive substances in a relatively insignificant number of orchids are identified, and most studies are on Asian taxa. Broader research on American and African species and the correct identification of samples included in the experiments are essential for evaluating the usefulness of orchids as a plant family with vast anticancer potential.
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Ferreira WDM, Oliveira AMD, Viana JC, Suzuki RM, Oliveira JRGD. Asymbiotic germination, initial development in vitro and acclimatization of Cyrtopodium paludicolum Hoehne, a Brazilian Savanna orchid species. RODRIGUÉSIA 2022. [DOI: 10.1590/2175-7860202273043] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Abstract Cyrtopodium paludicolum is a terrestrial orchid species, native to Brazil, whose natural propagation is jeopardized by the intensive collection from the wild and is threatened by agricultural expansion in Cerrado areas. In light of that, this investigation aimed at studying the in vitro germination and early development of C. paludicolum as influenced by culture medium, sucrose and growth regulators as well as its micropropagation by using dark-grown stem segments. A protocol for its acclimatization is also detailed. The effects of Murashige & Skoog (MS), Knudson C (KC) and Vacin & Went (VW) media on the in vitro germination and initial development were tested. The influence of different concentrations of BA, NAA, and of sucrose on plant multiplication and growth were evaluated. The possibility of using etiolated stem segments for micropropagation was also assessed. Acclimatization was accomplished in two phases by using three different substrates. The results showed that VW was the best medium for germination whereas for seedling formation KC was the most advantageous since they were healthy and vigorous. Sucrose at 2% favored the greatest seedling growth and development. Shoot and root proliferation and development were best promoted in the presence of 2.28/2.28 and 0.57/0.57 µM BA/NAA, respectively. The use of etiolated stem segments for micropropagation was effective. Successful acclimatization was accomplished by initially growing plants in community pots containing a 3:1 (v/v) mix of Bioplant and dried Sphagnum moss followed by their transfer to individual pots containing a 2:1 (v/v) mix of Bioplant and Ouro Negro substrates.
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Zhang FP, Zhang SB. Genome Size and Labellum Epidermal Cell Size Are Evolutionarily Correlated With Floral Longevity in Paphiopedilum Species. FRONTIERS IN PLANT SCIENCE 2021; 12:793516. [PMID: 34975981 PMCID: PMC8716874 DOI: 10.3389/fpls.2021.793516] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Accepted: 11/19/2021] [Indexed: 06/02/2023]
Abstract
Genome size is known to influence phenotypic traits in leaves and seeds. Although genome size is closely related to cellular and developmental traits across biological kingdoms, floral longevity is a floral trait with important fitness consequence, but less is known about the link between floral longevity and sizes of genomes and cells. In this study, we examined evolutionary coordination between genome size, floral longevity, and epidermal cell size in flowers and leaves in 13 Paphiopedilum species. We found that, across all the study species, the genome size was positively correlated with floral longevity but negatively associated with labellum epidermal cell size, and a negative relationship was found between floral longevity and labellum epidermal cell size. This suggested that genome size is potentially correlated with floral longevity, and genome size has an important impact on life-history trait. In addition, genome size was positively correlated with leaf epidermal cell size, which was different from the relationship in flower due to different selective pressures they experienced or different functions they performed. Therefore, genome size constraints floral longevity, and it is a strong predictor of cell size. The impact of genome size on reproduction might have more implications for the evolution of flowering plants and pollination ecology.
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Affiliation(s)
- Feng-Ping Zhang
- College of Traditional Chinese Medicine, Yunnan University of Chinese Medicine, Kunming, China
| | - Shi-Bao Zhang
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
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Xu Y, Lei Y, Su Z, Zhao M, Zhang J, Shen G, Wang L, Li J, Qi J, Wu J. A chromosome-scale Gastrodia elata genome and large-scale comparative genomic analysis indicate convergent evolution by gene loss in mycoheterotrophic and parasitic plants. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 108:1609-1623. [PMID: 34647389 DOI: 10.1111/tpj.15528] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Revised: 09/27/2021] [Accepted: 09/29/2021] [Indexed: 05/27/2023]
Abstract
Mycoheterotrophic and parasitic plants are heterotrophic and parasitize on fungi and plants, respectively, to obtain nutrients. Large-scale comparative genomics analysis has not been conducted in mycoheterotrophic or parasitic plants or between these two groups of parasites. We assembled a chromosome-level genome of the fully mycoheterotrophic plant Gastrodia elata (Orchidaceae) and performed comparative genomic analyses on the genomes of G. elata and four orchids (initial mycoheterotrophs), three parasitic plants (Cuscuta australis, Striga asiatica, and Sapria himalayana), and 36 autotrophs from various angiosperm lineages. It was found that while in the hemiparasite S. asiatica and initial mycoheterotrophic orchids, approximately 4-5% of the conserved orthogroups were lost, the fully heterotrophic G. elata and C. australis both lost approximately 10% of the conserved orthogroups, indicating that increased heterotrophy is positively associated with gene loss. Importantly, many genes that are essential for autotrophs, including those involved in photosynthesis, the circadian clock, flowering time regulation, immunity, nutrient uptake, and root and leaf development, were convergently lost in both G. elata and C. australis. The high-quality genome of G. elata will facilitate future studies on the physiology, ecology, and evolution of mycoheterotrophic plants, and our findings highlight the critical role of gene loss in the evolution of plants with heterotrophic lifestyles.
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Affiliation(s)
- Yuxing Xu
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Yunting Lei
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Zhongxiang Su
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Man Zhao
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Jingxiong Zhang
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Guojing Shen
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Lei Wang
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Jing Li
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Jinfeng Qi
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Jianqiang Wu
- Yunnan Key Laboratory for Wild Plant Resources, Department of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing, 100049, China
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Feng JQ, Zhang FP, Huang JL, Hu H, Zhang SB. Allometry Between Vegetative and Reproductive Traits in Orchids. FRONTIERS IN PLANT SCIENCE 2021; 12:728843. [PMID: 34721458 PMCID: PMC8548613 DOI: 10.3389/fpls.2021.728843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Accepted: 08/25/2021] [Indexed: 06/13/2023]
Abstract
In flowering plants, inflorescence characteristics influence both seed set and pollen contribution, while inflorescence and peduncle size can be correlated with biomass allocation to reproductive organs. Peduncles also play a role in water and nutrient supply of flowers, and mechanical support. However, it is currently unclear whether inflorescence size is correlated with peduncle size. Here, we tested whether orchids with large diameter peduncles bear more and larger flowers than those with smaller peduncles by analyzing 10 traits of inflorescence, flower, and leaf in 26 species. Peduncle diameters were positively correlated with inflorescence length and total floral area, indicating that species with larger peduncles tended to have larger inflorescences and larger flowers. We also found strongly positive correlation between inflorescence length and leaf area, and between total floral area and total leaf area, which suggested that reproductive organs may be allometrically coordinated with vegetative organs. However, neither flower number nor floral dry mass per unit area were correlated with leaf number or leaf dry mass per unit area, implying that the function between leaf and flower was uncoupled. Our findings provided a new insight for understanding the evolution of orchids, and for horticulturalists interested in improving floral and inflorescence traits in orchids.
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Affiliation(s)
- Jing-Qiu Feng
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Feng-Ping Zhang
- Yunnan Key Laboratory of Dai and Yi Medicines, College of Traditional Chinese Medicine, Yunnan University of Chinese Medicine, Kunming, China
| | | | - Hong Hu
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Shi-Bao Zhang
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
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Kömpe YO, Mutlu VA. Ex vitro symbiotic germination of the seeds of Anacamptis coriophora (L.) R.M. Bateman, Pritgeon & M.W. Chase and Orchis anatolica Boiss. Biol Futur 2021; 72:509-516. [PMID: 34606078 DOI: 10.1007/s42977-021-00100-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2020] [Accepted: 09/24/2021] [Indexed: 10/20/2022]
Abstract
Rapid destruction of orchid habitats and over-collection of the tubers are the greatest threats to orchid diversity. To counter these threats, it is necessary to grow orchid tubers easily and quickly for economic reasons and to reintroduce populations in the habitats of species that are facing extinction. This study demonstrates a simple viability test for orchid seeds and the ex vitro symbiotic seed germination of temperate orchids. Viability of the seeds of two orchid species, Anacamptis coriophora and Orchis anatolica, was determined without any chemical treatment of the seed coat. Seeds were incubated in packs in moist cocopeats for five days during which seed viability tests being performed daily. The highest viability rate was found in the seeds that were incubated for five days (64.33% for O. coriophora; 67.19% for O. anatolica). The seeds of these orchids were sown non-axenically into a pre-inoculated soil mixture with a compatible fungus, Ceratobasidium sp. AG A. The seeds of both the orchids germinated 18 days after sowing. Leafy and rooted seedlings developed two months after sowing and the first tubers of both the species developed seven months later.
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Affiliation(s)
- Yasemin Ozdener Kömpe
- Department of Biology, Faculty of Sciences and Arts, University of Ondokuz Mayis, Atakum, 55139, Samsun, Turkey.
| | - Vildan Akın Mutlu
- Department of Biology, Faculty of Sciences and Arts, University of Ondokuz Mayis, Atakum, 55139, Samsun, Turkey
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An Improved Protocol for Asymbiotic Seed Germination and Seedling Development of Paphiopedilum tigrinum. HORTICULTURAE 2021. [DOI: 10.3390/horticulturae7090298] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Paphiopedilum tigrinum is an endangered orchid with high ornamental value. However, seed germination and seedling regeneration in P. tigrinum is very difficult in vitro. Little is known about why P. tigrinum seedlings are difficult to propagate or how to improve the seed germination and seedling rates of this species. In this study, we investigated the developmental process of P. tigrinum from asymbiotic seed germination to seedling rooting by comparing it with P. appletoniantum, a much easier species for germination and seedling formation. We found that asymbiotic seed germination in P. tigrinum is limited by severe browning of the protocorm at the seed germination stage, and protocorm rooting at the differentiation stage was also proved to be difficult. The optimal medium for seed germination of P. tigrinum was a modified Harvais (mHa) medium supplemented with 0.5 mg·L−1 kinetin (Kin), 0.1 g·L−1 activated charcoal (AC) and 100 mL·L−1 coconut water (CW). At the protocorm differentiation stage, seedlings with 1–2 leaves were obtained on a 1/4 MS medium supplemented with 1.0 mg·L−1 6-benzylaminopurin (BA), 0.3 g·L−1 AC and 50–100 mL·L−1 CW after culturing for 120 day. At the seedling subculture stage, a 1/2 MS medium supplemented with 0.5–1.5 g·L−1 AC and 100 mL·L−1 CW was better for leaf and root growth of P. tigrinum. At the rooting stage, a 1/2 MS medium supplemented with 1.0 g·L−1 AC, 0.5 g·L−1 dolomite flour, 15 g·L−1 potato homogenate and 30 g·L−1 banana homogenate was most suitable for the growth and rooting of seedlings. This study has established an effective protocol for seed germination and seedling regeneration of P. tigrinum.
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Zhang FP, Huang JL, Fu XW, Huang W, Zhang SB. Peduncle vulnerability to embolism is related to conduit dimensions of the critically endangered slipper orchids in Southwest China. Glob Ecol Conserv 2021. [DOI: 10.1016/j.gecco.2021.e01654] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
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Different Strategies for Photosynthetic Regulation under Fluctuating Light in Two Sympatric Paphiopedilum Species. Cells 2021; 10:cells10061451. [PMID: 34200524 PMCID: PMC8229141 DOI: 10.3390/cells10061451] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2021] [Revised: 05/30/2021] [Accepted: 06/02/2021] [Indexed: 01/10/2023] Open
Abstract
Fluctuating light can cause selective photoinhibition of photosystem I (PSI) in angiosperms. Cyclic electron flow (CEF) around PSI and electron flux from water via the electron transport chain to oxygen (the water-water cycle) play important roles in coping with fluctuating light in angiosperms. However, it is unclear whether plant species in the same genus employ the same strategy to cope with fluctuating light. To answer this question, we measured P700 redox kinetics and chlorophyll fluorescence under fluctuating light in two Paphiopedilum (P.) Pftzer (Orchidaceae) species, P. dianthum and P. micranthum. After transition from dark to high light, P. dianthum displayed a rapid re-oxidation of P700, while P. micranthum displayed an over-reduction of P700. Furthermore, the rapid re-oxidation of P700 in P. dianthum was not observed when measured under anaerobic conditions. These results indicated that photo-reduction of O2 mediated by the water-water cycle was functional in P. dianthum but not in P. micranthum. Within the first few seconds after an abrupt transition from low to high light, PSI was highly oxidized in P. dianthum but was highly reduced in P. micranthum, indicating that the different responses of PSI to fluctuating light between P. micranthum and P. dianthum was attributed to the water-water cycle. In P. micranthum, the lack of the water-water cycle was partially compensated for by an enhancement of CEF. Taken together, P. dianthum and P. micranthum employed different strategies to cope with the abrupt change of light intensity, indicating the diversity of strategies for photosynthetic acclimation to fluctuating light in these two closely related orchid species.
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Zhang FP, Feng JQ, Huang JL, Huang W, Fu XW, Hu H, Zhang SB. Floral Longevity of Paphiopedilum and Cypripedium Is Associated With Floral Morphology. FRONTIERS IN PLANT SCIENCE 2021; 12:637236. [PMID: 34135917 PMCID: PMC8200665 DOI: 10.3389/fpls.2021.637236] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Accepted: 04/06/2021] [Indexed: 06/02/2023]
Abstract
Floral longevity (FL) is an important trait influencing plant reproductive success by affecting the chance of insect pollination. However, it is still unclear which factors affect FL, and whether FL is evolutionarily associated with structural traits. Since construction costs and water loss by transpiration play a role in leaf longevity, we speculated that floral structures may affect the maintenance and loss of water in flowers and, therefore, FL. Here, we investigated the slipper orchid Paphiopedilum and Cypripedium, which are closely related, but strongly differ in their FL. To understand the evolutionary association of floral anatomical traits with FL, we used a phylogenetic independent comparative method to examine the relationships between 30 floral anatomical traits and FL in 18 species of Paphiopedilum and Cypripedium. Compared with Paphiopedilum species, Cypripedium species have lower values for floral traits related to drought tolerance and water retention capacity. Long FL was basically accompanied by the thicker epidermal and endodermal tissues of the floral stem, the thicker adaxial and abaxial epidermis of the flower, and low floral vein and stomatal densities. Vein density of the dorsal sepals and synsepals was negatively correlated with stomatal density. Our results supported the hypothesis that there was a correlation between FL and floral anatomical traits in slipper orchids. The ability to retain water in the flowers was associated with FL. These findings provide a new insight into the evolutionary association of floral traits with transpirational water loss for orchids under natural selection.
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Affiliation(s)
- Feng-Ping Zhang
- Yunnan Key Laboratory of Dai and Yi Medicines, College of Traditional Chinese Medicine, Yunnan University of Chinese Medicine, Kunming, China
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Jing-Qiu Feng
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Jia-Lin Huang
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- Yuxi Normal University, Yuxi, China
| | - Wei Huang
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Xue-Wei Fu
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Hong Hu
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Shi-Bao Zhang
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
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Adaptive Morphophysiological Features of Neottia ovata (Orchidaceae) Contributing to Its Natural Colonization on Fly Ash Deposits. HORTICULTURAE 2021. [DOI: 10.3390/horticulturae7050109] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
In previous decades, some species of the Orchidaceae family have been found growing in man-made habitats. Neottia ovata is one of the most widespread orchids in Europe, however it is quite rare in Russia and is included in several regional Red Data Books. The purpose of this study was to compare the chemical composition and morphophysiological parameters of N. ovata from two forest communities of the Middle Urals, Russia: natural and transformed (fly ash dump of Verkhnetagil’skaya Thermal Power Station) for determining orchid adaptive features. The content of most of the studied metals in the underground parts (rhizome + roots) of N. ovata was considerably higher than in the leaves, which diminished the harmful effect of toxic metals on the aboveground organs. The adaptive changes in the leaf mesostructure of N. ovata such as an increase in epidermis thickness, the number of chloroplasts in the cell, and the internal assimilating surface were found for the first time. The orchids from the fly ash deposits were characterized by a higher content of chlorophyll b and carotenoids than plants from the natural forest community that evidenced the compensatory response on the decrease in chlorophyll a. The ability of N. ovata from the transformed habitat to maintain a relatively favorable water balance and stable assimilation indexes further contribute to its high viability. The study of orchid adaptive responses to unfavorable factors is necessary for their successful naturalization and introduction into a new environment.
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Li T, Wu S, Yang W, Selosse MA, Gao J. How Mycorrhizal Associations Influence Orchid Distribution and Population Dynamics. FRONTIERS IN PLANT SCIENCE 2021; 12:647114. [PMID: 34025695 PMCID: PMC8138319 DOI: 10.3389/fpls.2021.647114] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2020] [Accepted: 04/13/2021] [Indexed: 05/04/2023]
Abstract
Orchid distribution and population dynamics are influenced by a variety of ecological factors and the formation of holobionts, which play key roles in colonization and ecological community construction. Seed germination, seedling establishment, reproduction, and survival of orchid species are strongly dependent on orchid mycorrhizal fungi (OMF), with mycorrhizal cheating increasingly observed in photosynthetic orchids. Therefore, changes in the composition and abundance of OMF can have profound effects on orchid distribution and fitness. Network analysis is an important tool for the study of interactions between plants, microbes, and the environment, because of the insights that it can provide into the interactions and coexistence patterns among species. Here, we provide a comprehensive overview, systematically describing the current research status of the effects of OMF on orchid distribution and dynamics, phylogenetic signals in orchid-OMF interactions, and OMF networks. We argue that orchid-OMF associations exhibit complementary and specific effects that are highly adapted to their environment. Such specificity of associations may affect the niche breadth of orchid species and act as a stabilizing force in plant-microbe coevolution. We postulate that network analysis is required to elucidate the functions of fungal partners beyond their effects on germination and growth. Such studies may lend insight into the microbial ecology of orchids and provide a scientific basis for the protection of orchids under natural conditions in an efficient and cost-effective manner.
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Affiliation(s)
- Taiqiang Li
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming, China
- Laboratory of Ecology and Evolutionary Biology, Yunnan University, Kunming, China
| | - Shimao Wu
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming, China
- Laboratory of Ecology and Evolutionary Biology, Yunnan University, Kunming, China
| | - Wenke Yang
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming, China
- Laboratory of Ecology and Evolutionary Biology, Yunnan University, Kunming, China
| | - Marc-André Selosse
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming, China
- Laboratory of Ecology and Evolutionary Biology, Yunnan University, Kunming, China
- Institut de Systématique, Évolution, Biodiversité, UMR 7205, CNRS, MNHN, UPMC, EPHE, Muséum National d’Histoire Naturelle, Sorbonne Universités, Paris, France
- Department of Plant Taxonomy and Nature Conservation, Faculty of Biology, University of Gdańsk, Gdańsk, Poland
| | - Jiangyun Gao
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming, China
- Laboratory of Ecology and Evolutionary Biology, Yunnan University, Kunming, China
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Genome Size Diversity in Rare, Endangered, and Protected Orchids in Poland. Genes (Basel) 2021; 12:genes12040563. [PMID: 33924526 PMCID: PMC8070121 DOI: 10.3390/genes12040563] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2021] [Revised: 04/09/2021] [Accepted: 04/11/2021] [Indexed: 01/25/2023] Open
Abstract
Orchidaceae is one of the largest and the most widespread plant families with many species threatened with extinction. However, only about 1.5% of orchids’ genome sizes have been known so far. The aim of this study was to estimate the genome size of 15 species and one infraspecific taxon of endangered and protected orchids growing wild in Poland to assess their variability and develop additional criterion useful in orchid species identification and characterization. Flow cytometric genome size estimation revealed that investigated orchid species possessed intermediate, large, and very large genomes. The smallest 2C DNA content possessed Liparis loeselii (14.15 pg), while the largest Cypripedium calceolus (82.10 pg). It was confirmed that the genome size is characteristic to the subfamily. Additionally, for four species Epipactis albensis, Ophrys insectifera, Orchis mascula, Orchis militaris and one infraspecific taxon, Epipactis purpurata f. chlorophylla the 2C DNA content has been estimated for the first time. Genome size estimation by flow cytometry proved to be a useful auxiliary method for quick orchid species identification and characterization.
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Influence of scarification method on seed germination of the terrestrial orchid Anacamptis laxiflora (Lam.). EUROBIOTECH JOURNAL 2021. [DOI: 10.2478/ebtj-2021-0004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Abstract
A critical step during in vitro sexual propagation of terrestrial orchids is the treatment of the microscopic seeds with a disinfecting solution that kills bacteria and fungi attached to the seeds. This treatment is necessary to prevent infection of the culture vessels. At the same time, the treatment serves to scarify the seeds, a process that disrupts seed dormancy and initiates germination. The literature is inconclusive with respect to the proper combination of disinfecting solution strength and treatment duration. Both factors should be adapted to each species to guarantee minimal infection rate without damaging the embryo. This research aims to compare three disinfection/scarification methods for seeds of Anacamptis laxiflora (Lam.): (i) soaking in 0.5% NaClO, (ii) soaking in 0.5% NaClO, then centrifugation, and (iii) presoaking the seeds in sucrose solution, then soaking in 0.5% NaClO. The seeds were soaked in the disinfecting solution for 5 to 85 min. Following scarification, the seeds were sown in modified Malmgren nutrient medium. Infected and germinated vessels were counted at 41 and 189 d after sowing. We found that the longer the chemical treatment, the lower the infection rate, and the higher the germination rate. There was no significant difference in germination rate between the NaClO and the NaClO-plus-centrifugation method; in fact, the slight savings in disinfection time effected by centrifugation were more than offset by the added complexity of the method. Moreover, we found that centrifugation significantly delays germination. The sucrose presoak-plus-NaClO method was superior to plain NaClO, as the sucrose stimulates the germination of microbial spores on the surface of the seeds, making them easier to kill. Perhaps seeds with thicker testa as well as whole immature capsules could benefit even more from the pretreatment in sucrose solution.
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Wang Y, Tong Y, Adejobi OI, Wang Y, Liu A. Research Advances in Multi-Omics on the Traditional Chinese Herb Dendrobium officinale. FRONTIERS IN PLANT SCIENCE 2021; 12:808228. [PMID: 35087561 PMCID: PMC8787213 DOI: 10.3389/fpls.2021.808228] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2021] [Accepted: 12/07/2021] [Indexed: 05/04/2023]
Abstract
Dendrobium officinale Kimura et Migo is an important epiphytic plant, belonging to the Orchidaceae family. There are various bioactive components in D. officinale plants, mainly including polysaccharides, alkaloids, and phenolic compounds. These compounds have been demonstrated to possess multiple functions, such as anti-oxidation, immune regulation, and anti-cancer. Due to serious shortages of wild resources, deterioration of cultivated germplasm and the unstable quality of D. officinale, the study has been focused on the biosynthetic pathway and regulation mechanisms of bioactive compounds. In recent years, with rapid developments in detection technologies and analysis tools, omics research including genomics, transcriptomics, proteomics and metabolomics have all been widely applied in various medicinal plants, including D. officinale. Many important advances have been achieved in D. officinale research, such as chromosome-level reference genome assembly and the identification of key genes involved in the biosynthesis of active components. In this review, we summarize the latest research advances in D. officinale based on multiple omics studies. At the same time, we discuss limitations of the current research. Finally, we put forward prospective topics in need of further study on D. officinale.
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Affiliation(s)
- Yue Wang
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- Bio-Innovation Center of DR PLANT, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Yan Tong
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- Bio-Innovation Center of DR PLANT, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Oluwaniyi Isaiah Adejobi
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- Bio-Innovation Center of DR PLANT, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Yuhua Wang
- Key Laboratory of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- Bio-Innovation Center of DR PLANT, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Aizhong Liu
- Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, China
- *Correspondence: Aizhong Liu,
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Gholami S, Vafaee Y, Nazari F, Ghorbani A. Molecular characterization of endangered Iranian terrestrial orchids using ISSR markers and association with floral and tuber-related phenotypic traits. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2021; 27:53-68. [PMID: 33627962 PMCID: PMC7873147 DOI: 10.1007/s12298-020-00920-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2020] [Revised: 11/20/2020] [Accepted: 12/28/2020] [Indexed: 05/13/2023]
Abstract
We aimed to study the genetic diversity, population structure, and phylogeny of Iranian orchids using inter-simple sequence repeat (ISSR) markers to find markers associated with phenotypic traits. Based on the phenotypic analysis, the inflorescence length and the flower number of studied accessions ranged from 3.92 to 27.13 cm and 5 to 50, respectively. On the other hand, the tuber length ranged from 1.80 to 9.35 cm. A total of 310 reproducible ISSR fragments with a size range of 150 to 3000 bp were amplified. ISSR primers provided an average polymorphism information content of 0.391, varied from 0.488 for UBC-876 to 0.351 for UBC-842. Os.J population showed the lowest genetic diversity (H = 0.057 and I = 0.075), while Oyst.JA population showed the highest genetic diversity (H = 0.114 and I = 0.158). At species level, the average coefficient of genetic differentiation (G ST) ranged from 0.265 for Orchis simia to 0.587 for Himantoglossum affine. Gene flow (Nm) varied from 1.38 (O. simia) to 0.756 (Anacamptis collina). The UPGMA genetic similarity dendrogram using Jaccard coefficients (r = 0.973) revealed six main clusters. Based on the Bayesian clustering method, the highest probability of the data was achieved when accessions were divided into eight groups. Floral and tuber-related phenotypic traits represented high correlations together, and they were associated with some ISSR bands based on the multiple association analysis. Altogether, ISSR markers proved to be useful for discrimination and clarification of the relationships among species and populations collected from geographically different locations. Furthermore, it could identify the polymorphism among accessions within each population and species. SUPPLEMENTARY INFORMATION The online version of this article (10.1007/s12298-020-00920-0) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Soheila Gholami
- Department of Horticultural Science and Engineering, Faculty of Agriculture, University of Kurdistan, 66177-15175 Sanandaj, Iran
| | - Yavar Vafaee
- Department of Horticultural Science and Engineering, Faculty of Agriculture, University of Kurdistan, 66177-15175 Sanandaj, Iran
- Medicinal Plants Breeding and Development Research Institute, University of Kurdistan, 66177-15175 Sanandaj, Iran
| | - Farzad Nazari
- Department of Horticultural Science and Engineering, Faculty of Agriculture, University of Kurdistan, 66177-15175 Sanandaj, Iran
| | - Abdolbaset Ghorbani
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvagen 18D, 75236 Uppsala, Sweden
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Fungal Endophytes from Orchidaceae: Diversity and Applications. Fungal Biol 2021. [DOI: 10.1007/978-3-030-68260-6_14] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Shan T, Zhou L, Li B, Chen X, Guo S, Wang A, Tian L, Liu J. The Plant Growth-Promoting Fungus MF23 ( Mycena sp.) Increases Production of Dendrobium officinale (Orchidaceae) by Affecting Nitrogen Uptake and NH 4 + Assimilation. FRONTIERS IN PLANT SCIENCE 2021; 12:693561. [PMID: 34552603 PMCID: PMC8451717 DOI: 10.3389/fpls.2021.693561] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Accepted: 06/11/2021] [Indexed: 05/21/2023]
Abstract
Dendrobium officinale Kimura et Migo is a traditional and scarce medicinal orchid in China. Mycorrhizal fungi could supply nitrogen (N) to orchids for seed germination and seedling recruitment. However, the N transport mechanism between orchids and the fungus is poorly understand. Early studies found that the fungus MF23 (Mycena sp.) could promote the growth of D. officinale. To better dissect the molecular interactions involved in N transport between D. officinale and MF23, transcriptome and metabolome analyses were conducted on conventional and mycorrhizal cultivations of D. officinale. Moreover, validation tests were carried out in the greenhouse to measure net fluxes of N O 3 - and N H 4 + of roots by a non-invasive micro-test technology (NMT), determine N assimilation enzyme activity by the ELISA, and analyze the expression level of differentially expressed genes (DEGs) of N transporters and DEGs involved in N metabolism by RT-qPCR. Combined transcriptome and metabolome analyses showed that MF23 may influence N metabolism in D. officinale. The expression of DoNAR2.1 (nitrate transporter-activating protein), DoAMT11 (ammonium transporter), DoATFs (amino acid transporters), DoOPTs (oligopeptide transporters), and DoGDHs (glutamate dehydrogenases) in symbiotic D. officinale was upregulated. NMT results showed a preference for N H 4 + in D. officinale and indicated that MF23 could promote the uptake of N O 3 - and N H 4 + , especially for N H 4 + . ELISA results showed that MF23 could increase the activity of glutamine synthetase (GS) and glutamate dehydrogenase. This study suggested that MF23 increases the production of D. officinale by affecting N uptake and N H 4 + assimilation capacity.
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Bell SA. Translocation of threatened terrestrial orchids into non‐mined and post‐mined lands in the Hunter Valley of New South Wales, Australia. Restor Ecol 2020. [DOI: 10.1111/rec.13224] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Stephen A.J. Bell
- School of Environmental and Life Sciences, University of Newcastle Newcastle New South Wales Australia
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Suetsugu K. A novel seed dispersal mode of Apostasia nipponica could provide some clues to the early evolution of the seed dispersal system in Orchidaceae. Evol Lett 2020; 4:457-464. [PMID: 33014421 PMCID: PMC7523560 DOI: 10.1002/evl3.188] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2020] [Revised: 07/08/2020] [Accepted: 07/08/2020] [Indexed: 11/11/2022] Open
Abstract
Despite being one of the most diverse families, scant attention has been paid to the seed dispersal system in Orchidaceae, owing to the widely accepted notion that wind dispersal is the dominant strategy. However, the indehiscent fruits, with seeds immersed in fleshy tissue, evoke the possibility of endozoochory in Apostasioideae, the earliest diverging lineage of orchids. In the present study, I investigated the seed dispersal system of Apostasia nipponica by direct observation, time-lapse photography, and investigation of the viability of seeds passing through the digestive tract of orthopterans. This study revealed a previously undocumented seed dispersal system in A. nipponica, in which the cricket, Eulandrevus ivani, and the camel cricket, Diestrammena yakumontana, consume the fruit and defecate viable seeds. Orthopterans are rarely considered seed dispersers, but the gross fruit morphology and pigmentation patterns of some Apostasia species parallel those seen in A. nipponica, suggesting that similar seed dispersal systems could be widespread among Apostasia species. Whether seed dispersal by orthopteran frugivores is common in Apostasioideae warrants further investigation.
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Affiliation(s)
- Kenji Suetsugu
- Department of BiologyGraduate School of ScienceKobe UniversityKobeHyogo657–8501Japan
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Qin J, Zhang W, Zhang SB, Wang JH. Similar mycorrhizal fungal communities associated with epiphytic and lithophytic orchids of Coelogyne corymbosa. PLANT DIVERSITY 2020; 42:362-369. [PMID: 33134620 PMCID: PMC7584797 DOI: 10.1016/j.pld.2020.07.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2020] [Revised: 07/13/2020] [Accepted: 07/16/2020] [Indexed: 05/04/2023]
Abstract
Mycorrhizal fungi are essential for the growth and development of both epiphytic (growing on trees) and lithophytic (growing on rocks) orchids. Previous studies indicate that in lowland tropical areas, orchid mycorrhizal fungal compositions are correlated with the life form (i.e., epiphytic, lithophytic, or terrestrial) of their host plants. We therefore tested if a similar correlation exists in an orchid distributed at higher elevations. Coelogyne corymbosa is an endangered ornamental orchid species that can be found as a lithophyte and epiphyte in subtropical to subalpine areas. Based on high-throughput sequencing of the fungal internal transcribed spacer 2 (ITS2)-rDNA region of mycorrhizae of C. corymbosa, we detected 73 putative mycorrhizal fungal Operational Taxonomic Units (OTUs). The OTUs of two dominant lineages (Cantharellales and Sebacinales) detected from C. corymbosa are phylogenetically different from those of other species within the genus Coelogyne, indicating that different orchid species prefer specific mycorrhizal fungi. We also found that the Non-metric multidimensional scaling (NMDS) plots of orchid mycorrhizal fungi were not clustered with life form, the variations among orchid mycorrhizal fungal communities of different life forms were not significant, and most of the OTUs detected from epiphytic individuals were shared by the lithophytic plants, suggesting that orchid mycorrhizal associations of C. corymbosa were not affected by life form. These findings provide novel insights into mycorrhizal associations with endangered ornamental orchids.
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Affiliation(s)
- Jiao Qin
- Key Laboratory of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China
- Yunnan Key Laboratory for Wild Plant Resources, Kunming, Yunnan, China
| | - Wei Zhang
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, China
| | - Shi-Bao Zhang
- Key Laboratory of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China
- Yunnan Key Laboratory for Wild Plant Resources, Kunming, Yunnan, China
| | - Ji-Hua Wang
- Flower Research Institute, Yunnan Academy of Agricultural Sciences, Kunming, Yunnan, 650205, China
- Corresponding author.
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Qi Y, Huang JL, Zhang SB. Correlated evolution of leaf and root anatomic traits in Dendrobium (Orchidaceae). AOB PLANTS 2020; 12:plaa034. [PMID: 32818052 PMCID: PMC7426005 DOI: 10.1093/aobpla/plaa034] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2019] [Accepted: 07/15/2020] [Indexed: 06/02/2023]
Abstract
The whole-plant economic spectrum concept predicts that leaf and root traits evolve in coordination to cope with environmental stresses. However, this hypothesis is difficult to test in many species because their leaves and roots are exposed to different environments, above- and below-ground. In epiphytes, both leaves and roots are exposed to the atmosphere. Thus, we suspect there are consistent water conservation strategies in leaf and root traits of epiphytes due to similar selection pressures. Here, we measured the functional traits of 21 species in the genus Dendrobium, which is one of the largest epiphytic taxa in the family Orchidaceae, and used phylogenetically independent contrasts to test the relationships among traits, and between traits and the environment. Our results demonstrate that species with a thicker velamen tended to have thicker roots, a thicker root cortex and vascular cylinder, and a larger number of vessels in the root. Correspondingly, these species also had higher leaf mass per area, and thicker leaf lower cuticles. Leaf and root traits associated with water conservation showed significantly positive relationships. The number of velamen layers, leaf density and the ratio of vascular cylinder radius to root radius were significantly affected by the species' differing environments. Thus, traits related to water conservation and transport may play an important role in helping Dendrobium cope with the cool and dry conditions found at high elevations. These findings confirmed the hypothesis that leaf and root traits have evolved in coordination, and also provide insights into trait evolution and ecological adaptation in epiphytic orchids.
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Affiliation(s)
- Ying Qi
- Key Laboratory for Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Jia-Lin Huang
- Key Laboratory for Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, China
| | - Shi-Bao Zhang
- Key Laboratory for Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, China
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Alghamdi SA. Biological role of mycorrhizal fungi on the assimilation and transportation of carbon and nitrogen to Anacamptis palustris and Anacamptis laxiflor. Saudi J Biol Sci 2020; 27:465-473. [PMID: 31889872 PMCID: PMC6933280 DOI: 10.1016/j.sjbs.2019.11.010] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Revised: 11/11/2019] [Accepted: 11/13/2019] [Indexed: 11/28/2022] Open
Abstract
Fungal is a physiological trail and its understanding in the assimilation with the transfer of carbon (C) cum nitrogen (N) or (C/N) to orchid-seedlings have not been determined. Labelled stable isotopes 13C and 15N were used to plan the flow of C and N between orchid plants and mycorrhizal connotations in-terms of bulk transfer for C/N. This study attends to comprehend the mechanism, supporting mycorrhizal fungi which influences on orchid-seedling growth. Determined integration and transfer of C/N from amino acids (AA), ammonium nitrate (NH4NO3) and sugar for orchid-plant may lead to understand these mechanisms. This current study tries to estimate the importance of organic compounds as a source for C/N over the inorganic-NH4NO3. Generally, after begging of germination and when it is found to be associated to the nutrient resource, organic compound enhance the biomass accumulation of two orchid species. AA significantly increase the mass of 13C assimilated by two species. With amino acids the concentration of 13C in two species was greater than with NH4NO3 and sugar. At another phase, amount of 15N content shoots was a higher value in Anacamptis laxiflora shoots assimilated substantially additional of 15N with NH4NO3 plus sugar compared with ammonium nitrate only. This study showed that two terrestrial orchids species are reliant on organic compounds as a source of carbon and nitrogen more than inorganic compounds.
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Affiliation(s)
- Sameera A. Alghamdi
- Address: Department of Biological Sciences, Faculty of Science, King Abdulaziz University, P.O. Box 8020, Jeddah 21589, Jeddah, Saudi Arabia.
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Sarsaiya S, Shi J, Chen J. A comprehensive review on fungal endophytes and its dynamics on Orchidaceae plants: current research, challenges, and future possibilities. Bioengineered 2019; 10:316-334. [PMID: 31347943 PMCID: PMC6682353 DOI: 10.1080/21655979.2019.1644854] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Abstract
In the development of medicinally important Orchidaceae, the extent of fungal endophytes specificity is not presently very clear. Limited study has been available on natural products formed and its role on plant growth, defence mechanism by endophytes, and to characterize the chief treasure of bioactive molecules. Therefore, this review article presents an evaluation of the endophytes associated with Orchidaceae for physiology, metabolism, and genomics which have prominently contributed to the resurgence of novel metabolite research increasing our considerate of multifaceted mechanisms regulatory appearance of biosynthetic gene groups encoding diverse metabolites. Additionally, we presented the comprehensive recent development of bio-strategies for the cultivation of endophytes from Orchidaceae and integration of bioengineered ‘Genomics with metabolism’ approaches with emphases collective omics as powerful approach to discover novel metabolite compounds. The Orchidaceae-fungal endophytes' biodynamics for sustainable development of bioproducts and its applications are supported in large-scale biosynthesis of industrially and pharmaceutical important biomolecules.
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Affiliation(s)
- Surendra Sarsaiya
- a Key Laboratory of Basic Pharmacology and Joint International Research Laboratory of Ethnomedicine of Ministry of Education, Zunyi Medical University , Zunyi , China.,b Bioresource Institute for Healthy Utilization, Zunyi Medical University , Zunyi , China
| | - Jingshan Shi
- a Key Laboratory of Basic Pharmacology and Joint International Research Laboratory of Ethnomedicine of Ministry of Education, Zunyi Medical University , Zunyi , China
| | - Jishuang Chen
- b Bioresource Institute for Healthy Utilization, Zunyi Medical University , Zunyi , China.,c College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University , Nanjing , China
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Sun H, Yang Y, Zhou Z. A few words on our commemoration of 80 years at KIB. PLANT DIVERSITY 2018; 40:139-140. [PMID: 30740557 PMCID: PMC6137265 DOI: 10.1016/j.pld.2018.08.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Affiliation(s)
| | | | - Zhekun Zhou
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
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