Coupled disease-behavior dynamics on complex networks: A review

Epidemic modeling for misinformation spread in digital networks through a social intelligence approach

Online digital networks, including social networks, have significantly impacted individuals' personal and professional lives. Aside from exchanging news and topics of interest, digital networks play an essential role in the diffusion of information, which frequently significantly impacts worldwide societies. In this paper, we present a new mathematical epidemic model for digital networks that considers the sentiment of solitary misinformation in the networks and characteristics of human intelligence that play an important role in judging and spreading misinformation inside the networks. Our mathematical analysis has proved the existence and validity of the system in a real-time environment. Considering the real-world data, our simulation predicts how the misinformation could spread among different global communities and when an intervention mechanism should have to be carried out by the policyholders. Our simulation using the model proves that effective intervention mechanisms by isolating the fake news can effectively control the spread of misinformation among larger populations. The model can analyze the emotional and social intelligence of groups frequently subjected to disinformation and disseminating fake news.

Paradoxes in the coevolution of contagions and institutions

Epidemic models study the spread of undesired agents through populations, be it infectious diseases through a country, misinformation in social media or pests infesting a region. In combating these epidemics, we rely neither on global top-down interventions, nor solely on individual adaptations. Instead, interventions commonly come from local institutions such as public health departments, moderation teams on social media platforms or other forms of group governance. Classic models, which are often individual or agent-based, are ill-suited to capture local adaptations. We leverage developments of institutional dynamics based on cultural group selection to study how groups attempt local control of an epidemic by taking inspiration from the successes and failures of other groups. Incorporating institutional changes into epidemic dynamics reveals paradoxes: a higher transmission rate can result in smaller outbreaks as does decreasing the speed of institutional adaptation. When groups perceive a contagion as more worrisome, they can invest in improved policies and, if they maintain these policies long enough to have impact, lead to a reduction in endemicity. By looking at the interplay between the speed of institutions and the transmission rate of the contagions, we find rich coevolutionary dynamics that reflect the complexity of known biological and social contagions.

Effects of behavioral observability and social proof on the coupled epidemic-awareness dynamics in multiplex networks

Despite much progress in exploring the coupled epidemic-awareness dynamics in multiplex networks, little attention has been paid to the joint impacts of behavioral observability and social proof on epidemic spreading. Since both the protective actions taken by direct neighbors and the observability of these actions have essential influence on individuals' decisions. Thus, we propose a UAPU-SIR model by integrating the effects of these two factors into the decision-making process of taking preventive measures. Specifically, a new state called taken protective actions is introduced into the original unaware-aware-unaware (UAU) model to characterize the action-taken state of individuals after getting epidemic-related information. Using the Microscopic Markov Chain Approach (MMCA), the methods and model are described, and the epidemic threshold is analytically derived. We find that both observability of protecting behaviors and social proof can reduce the epidemic prevalence and raise the epidemic threshold. Moreover, only if observability of protection actions reaches a certain threshold can accelerating information diffusion is able to inhibit disease spreading and result in higher epidemic threshold. We also discover that, reducing the forgetting rate of information is able to decrease epidemic size.

Mathematical Assessment of the Role of Human Behavior Changes on SARS-CoV-2 Transmission Dynamics in the United States

The COVID-19 pandemic has not only presented a major global public health and socio-economic crisis, but has also significantly impacted human behavior towards adherence (or lack thereof) to public health intervention and mitigation measures implemented in communities worldwide. This study is based on the use of mathematical modeling approaches to assess the extent to which SARS-CoV-2 transmission dynamics is impacted by population-level changes of human behavior due to factors such as (a) the severity of transmission (such as disease-induced mortality and level of symptomatic transmission), (b) fatigue due to the implementation of mitigation interventions measures (e.g., lockdowns) over a long (extended) period of time, (c) social peer-pressure, among others. A novel behavior-epidemiology model, which takes the form of a deterministic system of nonlinear differential equations, is developed and fitted using observed cumulative SARS-CoV-2 mortality data during the first wave in the United States. The model fits the observed data, as well as makes a more accurate prediction of the observed daily SARS-CoV-2 mortality during the first wave (March 2020-June 2020), in comparison to the equivalent model which does not explicitly account for changes in human behavior. This study suggests that, as more newly-infected individuals become asymptomatically-infectious, the overall level of positive behavior change can be expected to significantly decrease (while new cases may rise, particularly if asymptomatic individuals have higher contact rate, in comparison to symptomatic individuals).

A behaviour and disease transmission model: incorporating the Health Belief Model for human behaviour into a simple transmission model

The health and economic impacts of infectious diseases such as COVID-19 affect all levels of a community from the individual to the governing bodies. However, the spread of an infectious disease is intricately linked to the behaviour of the people within a community since crowd behaviour affects individual human behaviour, while human behaviour affects infection spread, and infection spread affects human behaviour. Capturing these feedback loops of behaviour and infection is a well-known challenge in infectious disease modelling. Here, we investigate the interface of behavioural science theory and infectious disease modelling to explore behaviour and disease (BaD) transmission models. Specifically, we incorporate a visible protective behaviour into the susceptible-infectious-recovered-susceptible (SIRS) transmission model using the socio-psychological Health Belief Model to motivate behavioural uptake and abandonment. We characterize the mathematical thresholds for BaD emergence in the BaD SIRS model and the feasible steady states. We also explore, under different infectious disease scenarios, the effects of a fully protective behaviour on long-term disease prevalence in a community, and describe how BaD modelling can investigate non-pharmaceutical interventions that target-specific components of the Health Belief Model. This transdisciplinary BaD modelling approach may reduce the health and economic impacts of future epidemics.

Parameter estimation in behavioral epidemic models with endogenous societal risk-response

Behavioral epidemic models incorporating endogenous societal risk-response, where changes in risk perceptions prompt adjustments in contact rates, are crucial for predicting pandemic trajectories. Accurate parameter estimation in these models is vital for validation and precise projections. However, few studies have examined the problem of identifiability in models where disease and behavior parameters must be jointly estimated. To address this gap, we conduct simulation experiments to assess the effect on parameter estimation accuracy of a) delayed risk response, b) neglecting behavioral response in model structure, and c) integrating disease and public behavior data. Our findings reveal systematic biases in estimating behavior parameters even with comprehensive and accurate disease data and a well-structured simulation model when data are limited to the first wave. This is due to the significant delay between evolving risks and societal reactions, corresponding to the duration of a pandemic wave. Moreover, we demonstrate that conventional SEIR models, which disregard behavioral changes, may fit well in the early stages of a pandemic but exhibit significant errors after the initial peak. Furthermore, early on, relatively small data samples of public behavior, such as mobility, can significantly improve estimation accuracy. However, the marginal benefits decline as the pandemic progresses. These results highlight the challenges associated with the joint estimation of disease and behavior parameters in a behavioral epidemic model.

Predicting Covid-19 pandemic waves with biologically and behaviorally informed universal differential equations

During the COVID-19 pandemic, it became clear that pandemic waves and population responses were locked in a mutual feedback loop in a classic example of a coupled behavior-disease system. We demonstrate for the first time that universal differential equation (UDE) models are able to extract this interplay from data. We develop a UDE model for COVID-19 and test its ability to make predictions of second pandemic waves. We find that UDEs are capable of learning coupled behavior-disease dynamics and predicting second waves in a variety of populations, provided they are supplied with learning biases describing simple assumptions about disease transmission and population response. Though not yet suitable for deployment as a policy-guiding tool, our results demonstrate potential benefits, drawbacks, and useful techniques when applying universal differential equations to coupled systems.

COVID-19 pandemic waves: Identification and interpretation of global data

The mention of the COVID-19 waves is as prevalent as the pandemic itself. Identifying the beginning and end of the wave is critical to evaluating the impact of various COVID-19 variants and the different pharmaceutical and non-pharmaceutical (including economic, health and social, etc.) interventions. We demonstrate a scientifically robust method to identify COVID-19 waves and the breaking points at which they begin and end from January 2020 to June 2021. Employing the Break Least Square method, we determine the significance of COVID-19 waves for global-, regional-, and country-level data. The results show that the method works efficiently in detecting different breaking points. Identifying these breaking points is critical for evaluating the impact of the economic, health, social and other welfare interventions implemented during the pandemic crisis. Employing our method with high frequency data effectively determines the start and end points of the COVID-19 wave(s). Identifying waves at the country level is more relevant than at the global or regional levels. Our research results evidenced that the COVID-19 wave takes about 48 days on average to subside once it begins, irrespective of the circumstances.

Modeling the effect of observational social learning on parental decision-making for childhood vaccination and diseases spread over household networks

In this paper, we introduce a novel model for parental decision-making about vaccinations against a childhood disease that spreads through a contact network. This model considers a bilayer network comprising two overlapping networks, which are either Erdős-Rényi (random) networks or Barabási-Albert networks. The model also employs a Bayesian aggregation rule for observational social learning on a social network. This new model encompasses other decision models, such as voting and DeGroot models, as special cases. Using our model, we demonstrate how certain levels of social learning about vaccination preferences can converge opinions, influencing vaccine uptake and ultimately disease spread. In addition, we explore how two different cultures of social learning affect the establishment of social norms of vaccination and the uptake of vaccines. In every scenario, the interplay between the dynamics of observational social learning and disease spread is influenced by the network's topology, along with vaccine safety and availability.

Epidemic Spreading in Metapopulation Networks Coupled With Awareness Propagation

Understanding the feedback loop that links the spatiotemporal spread of infectious diseases and human behavior is an open problem. To study this problem, we develop a multiplex framework that couples epidemic spreading across subpopulations in a metapopulation network (i.e., physical layer) with the spreading of awareness about the epidemic in a communication network (i.e., virtual layer). We explicitly study the interactions between the mobility patterns across subpopulations and the awareness propagation among individuals. We analyze the coupled dynamics using microscopic Markov chains (MMCs) equations and validate the theoretical results via Monte Carlo (MC) simulations. We find that with the spreading of awareness, reducing human mobility becomes more effective in mitigating the large-scale epidemic. We also investigate the influence of varying topological features of the physical and virtual layers and the correlation between the connectivity and local population size per subpopulation. Overall the proposed modeling framework and findings contribute to the growing literature investigating the interplay between the spatiotemporal spread of epidemics and human behavior.

Complexity in the dengue spreading: A network analysis approach

In an increasingly interconnected society, preventing epidemics has become a major challenge. Numerous infectious diseases spread between individuals by a vector, creating bipartite networks of infection with the characteristics of complex networks. In the case of dengue, a mosquito-borne disease, these infection networks include a vector-the Aedes aegypti mosquito-which has expanded its endemic area due to climate change. In this scenario, innovative approaches are essential to help public agents in the fight against the disease. Using an agent-based model, we investigated the network morphology of a dengue endemic region considering four different serotypes and a small population. The degree, betweenness, and closeness distributions are evaluated for the bipartite networks, considering the interactions up to the second order for each serotype. We observed scale-free features and heavy tails in the degree distribution and betweenness and quantified the decay of the degree distribution with a q-Gaussian fit function. The simulation results indicate that the spread of dengue is primarily driven by human-to-human and human-to-mosquito interaction, reinforcing the importance of controlling the vector to prevent episodes of epidemic outbreaks.

Spreading dynamics in networks under context-dependent behavior

In some systems, the behavior of the constituent units can create a "context" that modifies the direct interactions among them. This mechanism of indirect modification inspired us to develop a minimal model of context-dependent spreading. In our model, agents actively impede (favor) or not diffusion during an interaction, depending on the behavior they observe among all the peers in the group within which that interaction occurs. We divide the population into two behavioral types and provide a mean-field theory to parametrize mixing patterns of arbitrary type-assortativity within groups of any size. As an application, we examine an epidemic-spreading model with context-dependent adoption of prophylactic tools such as face masks. By analyzing the distributions of groups' size and type-composition, we uncover a rich phenomenology for the basic reproduction number and the endemic state. We analytically show how changing the group organization of contacts can either facilitate or hinder epidemic spreading, eventually moving the system from the subcritical to the supercritical phase and vice versa, depending mainly on sociological factors, such as whether the prophylactic behavior is hardly or easily induced. More generally, our work provides a theoretical foundation to model higher-order contexts and analyze their dynamical implications, envisioning a broad theory of context-dependent interactions that would allow for a new systematic investigation of a variety of complex systems.

A cyclic behavioral modeling aspect to understand the effects of vaccination and treatment on epidemic transmission dynamics

Evolutionary epidemiological models have played an active part in analyzing various contagious diseases and intervention policies in the biological sciences. The design in this effort is the addition of compartments for treatment and vaccination, so the system is designated as susceptible, vaccinated, infected, treated, and recovered (SVITR) epidemic dynamic. The contact of a susceptible individual with a vaccinated or an infected individual makes the individual either immunized or infected. Inventively, the assumption that infected individuals enter the treatment and recover state at different rates after a time interval is also deliberated through the presence of behavioral aspects. The rate of change from susceptible to vaccinated and infected to treatment is studied in a comprehensive evolutionary game theory with a cyclic epidemic model. We theoretically investigate the cyclic SVITR epidemic model framework for disease-free and endemic equilibrium to show stable conditions. Then, the embedded vaccination and treatment strategies are present using extensive evolutionary game theory aspects among the individuals in society through a ridiculous phase diagram. Extensive numerical simulation suggests that effective vaccination and treatment may implicitly reduce the community risk of infection when reliable and cheap. The results exhibited the dilemma and benefitted situation, in which the interplay between vaccination and treatment evolution and coexistence are investigated by the indicators of social efficiency deficit and socially benefited individuals.

The impact of threshold decision mechanisms of collective behavior on disease spread

Humans are a hyper-social species, which greatly impacts the spread of infectious diseases. How do social dynamics impact epidemiology and what are the implications for public health policy? Here, we develop a model of disease transmission that incorporates social dynamics and a behavior that reduces the spread of disease, a voluntary nonpharmaceutical intervention (NPI). We use a "tipping-point" dynamic, previously used in the sociological literature, where individuals adopt a behavior given a sufficient prevalence of the behavior in the population. The thresholds at which individuals adopt the NPI behavior are modulated by the perceived risk of infection, i.e., the disease prevalence and transmission rate, costs to adopt the NPI behavior, and the behavior of others. Social conformity creates a type of "stickiness" whereby individuals are resistant to changing their behavior due to the population's inertia. In this model, we observe a nonmonotonicity in the attack rate as a function of various biological and social parameters such as the transmission rate, efficacy of the NPI, costs of the NPI, weight of social consequences of shirking the social norm, and the degree of heterogeneity in the population. We also observe that the attack rate can be highly sensitive to these parameters due to abrupt shifts in the collective behavior of the population. These results highlight the complex interplay between the dynamics of epidemics and norm-driven collective behaviors.

Epidemic control in networks with cliques

Social units, such as households and schools, can play an important role in controlling epidemic outbreaks. In this work, we study an epidemic model with a prompt quarantine measure on networks with cliques (a clique is a fully connected subgraph representing a social unit). According to this strategy, newly infected individuals are detected and quarantined (along with their close contacts) with probability f. Numerical simulations reveal that epidemic outbreaks in networks with cliques are abruptly suppressed at a transition point f_{c}. However, small outbreaks show features of a second-order phase transition around f_{c}. Therefore, our model can exhibit properties of both discontinuous and continuous phase transitions. Next, we show analytically that the probability of small outbreaks goes continuously to 1 at f_{c} in the thermodynamic limit. Finally, we find that our model exhibits a backward bifurcation phenomenon.

Evading tipping points in socio-mutualistic networks via structure mediated optimal strategy

The threat of large-scale pollinator decline is increasing globally under stress from multiple anthropogenic pressures. Traditional approaches have focused on managing endangered species at an individual level, in which the effect of complex interactions such as mutualism and competition are amiss. Here, we develop a coupled socio-mutualistic network model that captures the change in pollinator dynamics with human conservation opinion in a deteriorating environment. We show that the application of social norm (or conservation) at the pollinator nodes is fit to prevent sudden community collapse in representative networks of varied topology. Whilst primitive strategies have focused on regulating abundance as a mitigation strategy, the role of network structure has been largely overlooked. Here, we develop a novel network structure-mediated conservation strategy to find the optimal set of nodes on which norm implementation successfully prevents community collapse. We find that networks of intermediate nestedness require conservation at a minimum number of nodes to prevent a community collapse. We claim the robustness of the optimal conservation strategy (OCS) after validation on several simulated and empirical networks of varied complexity against a broad range of system parameters. Dynamical analysis of the reduced model shows that incorporating social norms allows the pollinator abundance to grow that would have otherwise crossed a tipping point and undergo extinction. Together, this novel means OCS provides a potential plan of action for conserving plant-pollinator networks bridging the gap between research in mutualistic networks and conservation ecology.

Complexity of Government response to COVID-19 pandemic: a perspective of coupled dynamics on information heterogeneity and epidemic outbreak

This study aims at modeling the universal failure in preventing the outbreak of COVID-19 via real-world data from the perspective of complexity and network science. Through formalizing information heterogeneity and government intervention in the coupled dynamics of epidemic and infodemic spreading, first, we find that information heterogeneity and its induced variation in human responses significantly increase the complexity of the government intervention decision. The complexity results in a dilemma between the socially optimal intervention that is risky for the government and the privately optimal intervention that is safer for the government but harmful to the social welfare. Second, via counterfactual analysis against the COVID-19 crisis in Wuhan, 2020, we find that the intervention dilemma becomes even worse if the initial decision time and the decision horizon vary. In the short horizon, both socially and privately optimal interventions agree with each other and require blocking the spread of all COVID-19-related information, leading to a negligible infection ratio 30 days after the initial reporting time. However, if the time horizon is prolonged to 180 days, only the privately optimal intervention requires information blocking, which would induce a catastrophically higher infection ratio than that in the counterfactual world where the socially optimal intervention encourages early-stage information spread. These findings contribute to the literature by revealing the complexity incurred by the coupled infodemic-epidemic dynamics and information heterogeneity to the governmental intervention decision, which also sheds insight into the design of an effective early warning system against the epidemic crisis in the future.

Coupled disease-vaccination behavior dynamic analysis and its application in COVID-19 pandemic

Predicting the evolutionary dynamics of the COVID-19 pandemic is a complex challenge. The complexity increases when the vaccination process dynamic is also considered. In addition, when applying a voluntary vaccination policy, the simultaneous behavioral evolution of individuals who decide whether and when to vaccinate must be included. In this paper, a coupled disease-vaccination behavior dynamic model is introduced to study the coevolution of individual vaccination strategies and infection spreading. We study disease transmission by a mean-field compartment model and introduce a non-linear infection rate that takes into account the simultaneity of interactions. Besides, the evolutionary game theory is used to investigate the contemporary evolution of vaccination strategies. Our findings suggest that sharing information with the entire population about the negative and positive consequences of infection and vaccination is beneficial as it boosts behaviors that can reduce the final epidemic size. Finally, we validate our transmission mechanism on real data from the COVID-19 pandemic in France.

Carbon emission fluctuations of Chinese inter-regional interaction: a network multi-hub diffusion perspective

The "double-carbon" policy is a new opportunity for the transformation of China's production sector. With steady economic growth, each province has proposed specific policies aimed at cleaner production. However, the interactions between regions and the complex linkages between industries have hindered the implementation of the "double-carbon" policy. In order to address this issue, we introduced a complex network framework with multiple industries at a national level. The framework aimed to clarify whether there is fluctuation diffusion in China's multi-province multi-industry carbon emission system, to identify key industries and regions, and to answer the question of "who" is the most effective in governance. The results showed that the fluctuations of industrial carbon emissions had a cross-regional diffusion effect in China indeed. The diffusion capacity of industry fluctuation depends on whether the industry is located at a "hub" position in the network. Hub industries with strong capacity can spread the carbon emission fluctuation of themselves and upstream or downstream industries to the whole country through regional interactions. This characteristic of the hub industry should be taken into account in governance to maximize the effectiveness of emission reduction. Shandong and Inner Mongolia, as important provinces for the production of intermediate products and energy chemicals in China, had a greater role to play in global carbon supply push from their hub industries than in the demand pull. The pulling capacity of Beijing-Tianjin-Hebei region to the national carbon demand side was greater than that of Yangtze River Delta and Pearl River Delta. These findings might have implications for environmental and economic policymaking, particularly with regard to cross-provincial coordinated systemic solutions and policy anchors for synergy with industries.

The impact of the self-recognition ability and physical quality on coupled negative information-behavior-epidemic dynamics in multiplex networks

In recent years, as the COVID-19 global pandemic evolves, many unprecedented new patterns of epidemic transmission continue to emerge. Reducing the impact of negative information diffusion, calling for individuals to adopt immunization behaviors, and decreasing the infection risk are of great importance to maintain public health and safety. In this paper, we construct a coupled negative information-behavior-epidemic dynamics model by considering the influence of the individual's self-recognition ability and physical quality in multiplex networks. We introduce the Heaviside step function to explore the effect of decision-adoption process on the transmission for each layer, and assume the heterogeneity of the self-recognition ability and physical quality obey the Gaussian distribution. Then, we use the microscopic Markov chain approach (MMCA) to describe the dynamic process and derive the epidemic threshold. Our findings suggest that increasing the clarification strength of mass media and enhancing individuals' self-recognition ability can facilitate the control of the epidemic. And, increasing physical quality can delay the epidemic outbreak and leads to suppress the scale of epidemic transmission. Moreover, the heterogeneity of the individuals in the information diffusion layer leads to a two-stage phase transition, while it leads to a continuous phase transition in the epidemic layer. Our results can provide favorable references for managers in controlling negative information, urging immunization behaviors and suppressing epidemics.

Impact of random and targeted disruptions on information diffusion during outbreaks

Outbreaks are complex multi-scale processes that are impacted not only by cellular dynamics and the ability of pathogens to effectively reproduce and spread, but also by population-level dynamics and the effectiveness of mitigation measures. A timely exchange of information related to the spread of novel pathogens, stay-at-home orders, and other measures can be effective at containing an infectious disease, particularly during the early stages when testing infrastructure, vaccines, and other medical interventions may not be available at scale. Using a multiplex epidemic model that consists of an information layer (modeling information exchange between individuals) and a spatially embedded epidemic layer (representing a human contact network), we study how random and targeted disruptions in the information layer (e.g., errors and intentional attacks on communication infrastructure) impact the total proportion of infections, peak prevalence (i.e., the maximum proportion of infections), and the time to reach peak prevalence. We calibrate our model to the early outbreak stages of the SARS-CoV-2 pandemic in 2020. Mitigation campaigns can still be effective under random disruptions, such as failure of information channels between a few individuals. However, targeted disruptions or sabotage of hub nodes that exchange information with a large number of individuals can abruptly change outbreak characteristics, such as the time to reach the peak of infection. Our results emphasize the importance of the availability of a robust communication infrastructure during an outbreak that can withstand both random and targeted disruptions.

Waves of infection emerging from coupled social and epidemiological dynamics

The coronavirus (SARS-CoV-2) exhibited waves of infection in 2020 and 2021 in Japan. The number of infected had multiple distinct peaks at intervals of several months. One possible process causing these waves of infection is people switching their activities in response to the prevalence of infection. In this paper, we present a simple model for the coupling of social and epidemiological dynamics. The assumptions are as follows. Each person switches between active and restrained states. Active people move more often to crowded areas, interact with each other, and suffer a higher rate of infection than people in the restrained state. The rate of transition from restrained to active states is enhanced by the fraction of currently active people (conformity), whereas the rate of backward transition is enhanced by the abundance of infected people (risk avoidance). The model may show transient or sustained oscillations, initial-condition dependence, and various bifurcations. The infection is maintained at a low level if the recovery rate is between the maximum and minimum levels of the force of infection. In addition, waves of infection may emerge instead of converging to the stationary abundance of infected people if both conformity and risk avoidance of people are strong.

A coupled awareness-epidemic model on a multi-layer time-varying network

Social interactions have become more complicated and changeable under the influence of information technology revolution. We, thereby, propose a multi-layer activity-driven network with attractiveness considering the heterogeneity of activated individual edge numbers, which aims to explore the role of heterogeneous behaviors in the time-varying network. Specifically, three types of individual behaviors are introduced: (i) self-quarantine of infected individuals, (ii) safe social distancing between infected and susceptible individuals, and (iii) information spreading of aware individuals. Epidemic threshold is theoretically derived in terms of the microscopic Markov chain approach and the mean-field approach. The results demonstrate that performing self-quarantine and maintaining safe social distance can effectively raise the epidemic threshold and suppress the spread of diseases. Interestingly, individuals' activity and individuals' attractiveness have an equivalent effect on epidemic threshold under the same condition. In addition, a similar result can be obtained regardless of the activated individual edge numbers. The epidemic outbreak earlier in a situation of the stronger heterogeneity of activated individual edge numbers.

Effect of Human Behavior on the Evolution of Viral Strains During an Epidemic

It is well known in the literature that human behavior can change as a reaction to disease observed in others, and that such behavioral changes can be an important factor in the spread of an epidemic. It has been noted that human behavioral traits in disease avoidance are under selection in the presence of infectious diseases. Here, we explore a complementary trend: the pathogen itself might experience a force of selection to become less “visible,” or less “symptomatic,” in the presence of such human behavioral trends. Using a stochastic SIR agent-based model, we investigated the co-evolution of two viral strains with cross-immunity, where the resident strain is symptomatic while the mutant strain is asymptomatic. We assumed that individuals exercised self-regulated social distancing (SD) behavior if one of their neighbors was infected with a symptomatic strain. We observed that the proportion of asymptomatic carriers increased over time with a stronger effect corresponding to higher levels of self-regulated SD. Adding mandated SD made the effect more significant, while the existence of a time-delay between the onset of infection and the change of behavior reduced the advantage of the asymptomatic strain. These results were consistent under random geometric networks, scale-free networks, and a synthetic network that represented the social behavior of the residents of New Orleans.

Multilayer networks with higher-order interaction reveal the impact of collective behavior on epidemic dynamics

The ongoing COVID-19 pandemic has inflicted tremendous economic and societal losses. In the absence of pharmaceutical interventions, the population behavioral response, including situational awareness and adherence to non-pharmaceutical intervention policies, has a significant impact on contagion dynamics. Game-theoretic models have been used to reproduce the concurrent evolution of behavioral responses and disease contagion, and social networks are critical platforms on which behavior imitation between social contacts, even dispersed in distant communities, takes place. Such joint contagion dynamics has not been sufficiently explored, which poses a challenge for policies aimed at containing the infection. In this study, we present a multi-layer network model to study contagion dynamics and behavioral adaptation. It comprises two physical layers that mimic the two solitary communities, and one social layer that encapsulates the social influence of agents from these two communities. Moreover, we adopt high-order interactions in the form of simplicial complexes on the social influence layer to delineate the behavior imitation of individual agents. This model offers a novel platform to articulate the interaction between physically isolated communities and the ensuing coevolution of behavioral change and spreading dynamics. The analytical insights harnessed therefrom provide compelling guidelines on coordinated policy design to enhance the preparedness for future pandemics.

The quantification of vaccine uptake in the Nordic countries and impact on key indicators of COVID-19 severity and healthcare stress level via age range comparative analysis

In this paper we analyze the impact of vaccinations on spread of the COVID-19 virus for different age groups. More specifically, we examine the deployment of vaccines in the Nordic countries in a comparative analysis where we focus on factors such as healthcare stress level and severity of disease through new infections, hospitalizations, intensive care unit (ICU) occupancy and deaths. Moreover, we analyze the impact of the various vaccine types, vaccination rate on the spread of the virus in each age group for Denmark, Finland, Iceland, Norway and Sweden from the start of the vaccination period in December 2020 until the end of September 2021. We perform a threefold analysis: (i) frequency analysis of infections and vaccine rates by age groups; (ii) rolling correlations between vaccination strategies, severity of COVID-19 and healthcare stress level and; (iii) we also employ the epidemic Renormalization Group (eRG) framework. The eRG is used to mathematically model wave structures, as well as the impact of vaccinations on wave dynamics. We further compare the Nordic countries with England. Our main results outline the quantification of the impact of the vaccination campaigns on age groups epidemiological data, across countries with high vaccine uptake. The data clearly shows that vaccines markedly reduce the number of new cases and the risk of serious illness.

Effects of official information and rumor on resource-epidemic coevolution dynamics

Epidemic-related information and resources have proven to have a significant impact on the spread of the epidemic during the Corona Virus Disease 2019 (COVID-19) pandemic. The various orientation role of information has different effects on the epidemic spreading process, which will affect the individual’ awareness of resources allocation and epidemic spreading scale. Based on this, a three-layer network is established to describe the dynamic coevolution process among information dissemination, resource allocation, and epidemic spreading. In order to analyze dynamic coevolution process, the microscopic Markov chain (MMC) theory is used. Then, the threshold of epidemic spreading is deduced. Our results indicated that the official information orientation intensity inhibits the epidemics spreading, while rumor orientation intensity promotes epidemic spreading. At the same time, the efficiency of resource utilization restrains the expansion of the infection scale. The two kinds of information are combined with resources respectively. Official information will enhance the inhibitory effect of resources epidemics spreading, while rumor will do the opposite.

Transmission dynamics of disease spreading in multilayer networks with mass media

On the basis of existing disease spreading research, in this paper we propose a Hesitant-Taken-Unaware-Aware-Susceptible-Asymptomatic-Symptomatic-Recovered (HTUA-SI^{a}I^{s}R) model with mass media in a two-layer network, which consists of a virtual communication layer and a physical contact layer. Based on the UAU-SIR model, we additionally consider three practical factors, including whether individuals will disseminate information or not, the influence of unaware individuals on aware individuals, and the direct recovery of asymptomatic infected individuals. Based on the microscopic Markov chain approach (MMCA), for the proposed HTUA-SI^{a}I^{s}R model, MMCA equations are generated and the analytical expression of the epidemic threshold is obtained. Compared with Monte Carlo techniques, numerical simulations show the feasibility and effectiveness of the MMCA equations, as well as the HTUA-SI^{a}I^{s}R model theoretically. Meanwhile, extensive simulations demonstrate that the acceleration of the awareness dissemination in the virtual communication layer can effectively block the epidemic spreading and raise the epidemic threshold. However, under certain conditions, the increasing of T-state individuals will increase the U-state individuals because the T-state and U-state individuals can influence the A-state individuals losing their awareness of protection, and then promote the epidemic spreading and decrease the epidemic threshold. In addition, reducing asymptomatic infections can hinder the epidemic spreading. But, when the recovery rate of asymptomatic infections is greater than that of symptomatic infections, decreasing the tendency of individuals acquiring asymptomatic infections will lower the epidemic threshold.

Effect of local and global information on the dynamical interplay between awareness and epidemic transmission in multiplex networks

Recent few years have witnessed a growing interest in exploring the dynamical interplay between awareness and epidemic transmission within the framework of multiplex networks. However, both local and global information have significant impacts on individual awareness and behavior, which have not been adequately characterized in the existing works. To this end, we propose a local and global information controlled spreading model to explore the dynamics of two spreading processes. In the upper layer, we construct a threshold model to describe the awareness diffusion process and introduce local and global awareness information as variables into an individual awareness ratio. In the lower layer, we adopt the classical susceptible-infected-susceptible model to represent the epidemic propagation process and introduce local and global epidemic information into individual precaution degree to reflect individual heterogeneity. Using the microscopic Markov chain approach, we theoretically derive the threshold for epidemic outbreaks. Our findings suggest that the local and global information can motivate individuals to increase self-protection awareness and take more precaution measures, thereby reducing disease infection probability and suppressing the spread of epidemics.

Vaccination games in prevention of infectious diseases with application to COVID-19

Vaccination coverage is crucial for disease prevention and control. An appropriate combination of compulsory vaccination with voluntary vaccination is necessary to achieve the goal of herd immunity for some epidemic diseases such as measles and COVID-19. A mathematical model is proposed that incorporates both compulsory vaccination and voluntary vaccination, where a decision of voluntary vaccination is made on the basis of game evaluation by comparing the expected returns of different strategies. It is shown that the threshold of disease invasion is determined by the reproduction numbers, and an over-response in magnitude or information interval in the dynamic games could induce periodic oscillations from the Hopf bifurcation. The theoretical results are applied to COVID-19 to find out the strategies for protective immune barrier against virus variants.

Think about your friends and family: The disparate impacts of relationship-centered messages on privacy concerns, protective health behavior, and vaccination against Covid-19

Objective

To understand which factors affect how willing people are to share their personal information to combat the Covid-19 pandemic, and compare them to factors that affect other public health behaviors.

Method

We analyze data from three pre-registered online experiments conducted over eight months during the Covid-19 pandemic in the United States (April 3 2020 –November 25, 2020). Our primary analysis tests whether support for data sharing and intention to practice protective behavior increase in response to relationship-centered messages about prosociality, disease spread, and financial hardship. We then conduct a secondary correlational analysis to compare the demographic and attitudinal factors associated with willingness to share data, protective behavior, and intent to get vaccinated. Our sample (N = 650) is representative to socio-demographic characteristics of the U.S. population.

Results

We find the altruistic condition increased respondents’ willingness to share data. In our correlational analysis, we find interactive effects of political ID and socio-demographic traits on likelihood to share data. In contrast, we found health behavior was most strongly associated with political ID, and intent to vaccinate was more associated with socio-demographic traits.

Conclusions

Our findings suggest that some public health messaging, even when it is not about data sharing or privacy, may increase public willingness to share data. We also find the role of socio-demographic factors in moderating the effect of political party ID varies by public health behavior.

Parasite-induced shifts in host movement may explain the transient coexistence of high- and low-pathogenic disease strains

Many parasites induce decreased host movement, known as lethargy, which can impact disease spread and the evolution of virulence. Mathematical models have investigated virulence evolution when parasites cause host death, but disease-induced decreased host movement has received relatively less attention. Here, we consider a model where, due to the within-host parasite replication rate, an infected host can become lethargic and shift from a moving to a resting state, where it can die. We find that when the lethargy and disease-induced mortality costs to the parasites are not high, then evolutionary bistability can arise, and either moderate or high virulence can evolve depending on the initial virulence and the magnitude of mutation. These results suggest, firstly, the coexistence of strains with different virulence, which may explain the transient coexistence of low- and high-pathogenic strains of avian influenza viruses, and secondly, that medical interventions to treat the symptoms of lethargy or prevent disease-induced host deaths can result in a large jump in virulence and the rapid evolution of high virulence. In complement to existing results that show bistability when hosts are heterogeneous at the population level, we show that evolutionary bistability may arise due to transmission heterogeneity at the individual host level.

Effects of the information-driven awareness on epidemic spreading on multiplex networks

In this study, we examine the impact of information-driven awareness on the spread of an epidemic from the perspective of resource allocation by comprehensively considering a series of realistic scenarios. A coupled awareness-resource-epidemic model on top of multiplex networks is proposed, and a Microscopic Markov Chain Approach is adopted to study the complex interplay among the processes. Through theoretical analysis, the infection density of the epidemic is predicted precisely, and an approximate epidemic threshold is derived. Combining both numerical calculations and extensive Monte Carlo simulations, the following conclusions are obtained. First, during a pandemic, the more active the resource support between individuals, the more effectively the disease can be controlled; that is, there is a smaller infection density and a larger epidemic threshold. Second, the disease can be better suppressed when individuals with small degrees are preferentially protected. In addition, there is a critical parameter of contact preference at which the effectiveness of disease control is the worst. Third, the inter-layer degree correlation has a "double-edged sword" effect on spreading dynamics. In other words, when there is a relatively lower infection rate, the epidemic threshold can be raised by increasing the positive correlation. By contrast, the infection density can be reduced by increasing the negative correlation. Finally, the infection density decreases when raising the relative weight of the global information, which indicates that global information about the epidemic state is more efficient for disease control than local information.

Epidemiological theory of virus variants

We propose a physics-inspired mathematical model underlying the temporal evolution of competing virus variants that relies on the existence of (quasi) fixed points capturing the large time scale invariance of the dynamics. To motivate our result we first modify the time-honoured compartmental models of the SIR type to account for the existence of competing variants and then show how their evolution can be naturally re-phrased in terms of flow equations ending at quasi fixed points. As the natural next step we employ (near) scale invariance to organise the time evolution of the competing variants within the effective description of the epidemic Renormalisation Group framework. We test the resulting theory against the time evolution of COVID-19 virus variants that validate the theory empirically.

Variant-driven early warning via unsupervised machine learning analysis of spike protein mutations for COVID-19

Never before such a vast amount of data, including genome sequencing, has been collected for any viral pandemic than for the current case of COVID-19. This offers the possibility to trace the virus evolution and to assess the role mutations play in its spread within the population, in real time. To this end, we focused on the Spike protein for its central role in mediating viral outbreak and replication in host cells. Employing the Levenshtein distance on the Spike protein sequences, we designed a machine learning algorithm yielding a temporal clustering of the available dataset. From this, we were able to identify and define emerging persistent variants that are in agreement with known evidences. Our novel algorithm allowed us to define persistent variants as chains that remain stable over time and to highlight emerging variants of epidemiological interest as branching events that occur over time. Hence, we determined the relationship and temporal connection between variants of interest and the ensuing passage to dominance of the current variants of concern. Remarkably, the analysis and the relevant tools introduced in our work serve as an early warning for the emergence of new persistent variants once the associated cluster reaches 1% of the time-binned sequence data. We validated our approach and its effectiveness on the onset of the Alpha variant of concern. We further predict that the recently identified lineage AY.4.2 ('Delta plus') is causing a new emerging variant. Comparing our findings with the epidemiological data we demonstrated that each new wave is dominated by a new emerging variant, thus confirming the hypothesis of the existence of a strong correlation between the birth of variants and the pandemic multi-wave temporal pattern. The above allows us to introduce the epidemiology of variants that we described via the Mutation epidemiological Renormalisation Group framework.

Double transition in kinetic exchange opinion models with activation dynamics

In this work, we study a model of opinion dynamics considering activation/deactivation of agents. In other words, individuals are not static and can become inactive and drop out from the discussion. A probability [Formula: see text] governs the deactivation dynamics, whereas social interactions are ruled by kinetic exchanges, considering competitive positive/negative interactions. Inactive agents can become active due to interactions with active agents. Our analytical and numerical results show the existence of two distinct non-equilibrium phase transitions, with the occurrence of three phases, namely ordered (ferromagnetic-like), disordered (paramagnetic-like) and absorbing phases. The absorbing phase represents a collective state where all agents are inactive, i.e. they do not participate in the dynamics, inducing a frozen state. We determine the critical value [Formula: see text] above which the system is in the absorbing phase independently of the other parameters. We also verify a distinct critical behaviour for the transitions among different phases. This article is part of the theme issue 'Kinetic exchange models of societies and economies'.

Robust models of disease heterogeneity and control, with application to the SARS-CoV-2 epidemic

In light of the continuing emergence of new SARS-CoV-2 variants and vaccines, we create a robust simulation framework for exploring possible infection trajectories under various scenarios. The situations of primary interest involve the interaction between three components: vaccination campaigns, non-pharmaceutical interventions (NPIs), and the emergence of new SARS-CoV-2 variants. Additionally, immunity waning and vaccine boosters are modeled to account for their growing importance. New infections are generated according to a hierarchical model in which people have a random, individual infectiousness. The model thus includes super-spreading observed in the COVID-19 pandemic which is important for accurate uncertainty prediction. Our simulation functions as a dynamic compartment model in which an individual's history of infection, vaccination, and possible reinfection all play a role in their resistance to further infections. We present a risk measure for each SARS-CoV-2 variant, [Formula: see text], that accounts for the amount of resistance within a population and show how this risk changes as the vaccination rate increases. [Formula: see text] highlights that different variants may become dominant in different countries-and in different times-depending on the population compositions in terms of previous infections and vaccinations. We compare the efficacy of control strategies which act to both suppress COVID-19 outbreaks and relax restrictions when possible. We demonstrate that a controller that responds to the effective reproduction number in addition to case numbers is more efficient and effective in controlling new waves than monitoring case numbers alone. This not only reduces the median total infections and peak quarantine cases, but also controls outbreaks much more reliably: such a controller entirely prevents rare but large outbreaks. This is important as the majority of public discussions about efficient control of the epidemic have so far focused primarily on thresholds for case numbers.

Effective mathematical modelling of health passes during a pandemic

We study the impact on the epidemiological dynamics of a class of restrictive measures that are aimed at reducing the number of contacts of individuals who have a higher risk of being infected with a transmittable disease. Such measures are currently either implemented or at least discussed in numerous countries worldwide to ward off a potential new wave of COVID-19. They come in the form of Health Passes (HP), which grant full access to public life only to individuals with a certificate that proves that they have either been fully vaccinated, have recovered from a previous infection or have recently tested negative to SARS-Cov-2. We develop both a compartmental model as well as an epidemic Renormalisation Group approach, which is capable of describing the dynamics over a longer period of time, notably an entire epidemiological wave. Introducing different versions of HPs in this model, we are capable of providing quantitative estimates on the effectiveness of the underlying measures as a function of the fraction of the population that is vaccinated and the vaccination rate. We apply our models to the latest COVID-19 wave in several European countries, notably Germany and Austria, which validate our theoretical findings.

Epidemic Dynamics of a Fractional-Order SIR Weighted Network Model and Its Targeted Immunity Control

With outbreaks of epidemics, an enormous loss of life and property has been caused. Based on the influence of disease transmission and information propagation on the transmission characteristics of infectious diseases, in this paper, a fractional-order SIR epidemic model is put forward on a two-layer weighted network. The local stability of the disease-free equilibrium is investigated. Moreover, a conclusion is obtained that there is no endemic equilibrium. Since the elderly and the children have fewer social tiers, a targeted immunity control that is based on age structure is proposed. Finally, an example is presented to demonstrate the effectiveness of the theoretical results. These studies contribute to a more comprehensive understanding of the epidemic transmission mechanism and play a positive guiding role in the prevention and control of some epidemics.

Effect of vaccine efficacy on disease transmission with age-structured

Recent outbreaks of novel infectious diseases (e.g., COVID-19, H2N3) have highlighted the threat of pathogen transmission, and vaccination offers a necessary tool to relieve illness. However, vaccine efficacy is one of the barriers to eradicating the epidemic. Intuitively, vaccine efficacy is closely related to age structures, and the distribution of vaccine efficacy usually obeys a Gaussian distribution, such as with H3N2 and influenza A and B. Based on this fact, in this paper, we study the effect of vaccine efficacy on disease spread by considering different age structures and extending the traditional susceptible-infected-recovery/vaccinator(SIR/V) model with two stages to three stages, which includes the decision-making stage, epidemic stage, and birth-death stage. Extensive numerical simulations show that our model generates a higher vaccination level compared with the case of complete vaccine efficacy because the vaccinated individuals in our model can form small and numerous clusters slower than that of complete vaccine efficacy. In addition, priority vaccination for the elderly is conducive to halting the epidemic when facing population ageing. Our work is expected to provide valuable information for decision-making and the design of more effective disease control strategies.

The coupled dynamics of information dissemination and SEIR-based epidemic spreading in multiplex networks

The outbreak of coronavirus disease 2019 (COVID-19) threatens the health and safety of all humanity. This disease has a prominent feature: the presymptomatic and asymptomatic viral carriers can spread the disease. It is crucial to estimate the impact of this undetected transmission on epidemic outbreaks. Currently, disease-related information has been widely disseminated by the mass media. To investigate the impact of both individuals and mass media information dissemination on the epidemic spreading, we establish a new UAU-SEIR (Unaware-Aware-Unaware-Susceptible-Exposed-Infected-Recovered) model with mass media on two-layer multiplex networks. In the model, E-state individuals denote asymptomatic infections, and a single node connecting to all individuals denotes the mass media. In this work, we use the Microscopic Markovian Chain Approach (MMCA) to derive the epidemic threshold. Comparing the MMCA theoretical results with Monte Carlo (MC) simulations, we find that the MMCA has a good consistency with MC simulations. In addition, we also analyze the impact of model parameters on epidemic spreading and epidemic threshold. The results show that reducing the proportion of asymptomatic infections, accelerating the dissemination of information between individuals and the dissemination of information via the mass media can effectively inhibit the epidemic spreading and raise the epidemic threshold.

Exploring S-shape curves and heterogeneity effects of rumor spreading in online collective actions

Nowadays online collective actions are pervasive, such as the rumor spreading on the Internet. The observed curves take on the S-shape, and we focus on evolutionary dynamics for S- shape curves of online rumor spreading. For agents, key factors, such as internal aspects, external aspects, and hearing frequency jointly determine whether to spread it. Agent-based modeling is applied to capture micro-level mechanism of this S-shape curve. We have three findings: (a) Standard S-shape curves of spreading can be obtained if each agent has the zero threshold; (b) Under zero-mean thresholds, as heterogeneity (SD) grows from zero, S-shape curves with longer right tails can be obtained. Generally speaking, stronger heterogeneity comes up with a longer duration; and (c) Under positive mean thresholds, the spreading curve is two-staged, with a linear stage (first) and nonlinear stage (second), but not standard S-shape curves either. From homogeneity to heterogeneity, the spreading S-shaped curves have longer right tail as the heterogeneity grows. For the spreading duration, stronger heterogeneity usually brings a shorter duration. The effects of heterogeneity on spreading curves depend on different situations. Under both zero and positive-mean thresholds, heterogeneity leads to S-shape curves. Hence, heterogeneity enhances the spreading with thresholds, but it may postpone the spreading process with homogeneous thresholds.

Coordination games in cancer

We propose a model of cancer initiation and progression where tumor growth is modulated by an evolutionary coordination game. Evolutionary games of cancer are widely used to model frequency-dependent cell interactions with the most studied games being the Prisoner's Dilemma and public goods games. Coordination games, by their more obscure and less evocative nature, are left understudied, despite the fact that, as we argue, they offer great potential in understanding and treating cancer. In this paper we present the conditions under which coordination games between cancer cells evolve, we propose aspects of cancer that can be modeled as results of coordination games, and explore the ways through which coordination games of cancer can be exploited for therapy.

The impact of information dissemination on vaccination in multiplex networks

The impact of information dissemination on epidemic control is essentially subject to individual behaviors. Vaccination is one of the most effective strategies against the epidemic spread, whose correlation with the information dissemination should be better understood. To this end, we propose an evolutionary vaccination game model in multiplex networks by integrating an information-epidemic spreading process into the vaccination dynamics, and explore how information dissemination influences vaccination. The spreading process is described by a two-layer coupled susceptible-alert-infected-susceptible (SAIS) model, where the strength coefficient between two layers characterizes the tendency and intensity of information dissemination. We find that the impact of information dissemination on vaccination decision-making depends on not only the vaccination cost and network topology, but also the stage of the system evolution. For instance, in a two-layer BA scale-free network, information dissemination helps to improve vaccination density only at the early stage of the system evolution, as well as when the vaccination cost is smaller. A counter-intuitive conclusion that more information transmission cannot promote vaccination is obtained when the vaccination cost is larger. Moreover, we study the impact of the strength coefficient and individual sensitivity on the fraction of infected individuals and social cost, and unveil the role of information dissemination in controlling the epidemic.

Extinction and stationary distribution of a stochastic SIQR epidemic model with demographics and non-monotone incidence rate on scale-free networks

By taking full consideration of contact heterogeneity of individuals, quarantine measures, demographics, information transmission and random environments, we present a stochastic SIQR epidemic model with demographics and non-monotone incidence rate on scale-free networks, which introduces stochastic perturbations to death rate. The formula of the basic reproduction number of the deterministic model is obtained by utilizing the existence of the endemic equilibrium. Next, we define a stopping time, then the existence of a unique global positive solution for the stochastic model is proved by constructing appropriate Lyapunov function to demonstrate the stopping time is infinite. In addition, we also manifest sufficient conditions for diseases extinction and the existence of ergodic stationary distribution by constructing appropriate stochastic Lyapunov functions. At last, numerical simulations illustrate the analytical results.

Analytical solution of epidemic threshold for coupled information-epidemic dynamics on multiplex networks with alterable heterogeneity

The phase transition of epidemic spreading model on networks is one of the most important concerns of physicists to theoretical epidemiology. In this paper, we present an analytical expression of epidemic threshold for interplay between epidemic spreading and human behavior on multiplex networks. The threshold formula proposed in this paper reveals the relation between the threshold on single-layer networks and that on multiplex networks, which means that the theoretical conclusions of single-layer networks can be used to improve the threshold accuracy of multiplex networks. To verify how well our formula works in different networks, we build a network model with constant total number of edges but gradually changing the heterogeneity of the network, from scale-free network to Erdős-Rényi random network. By use of theoretical analysis and computer simulations, we find that the heterogeneity of information layer behaves as a "double-edged sword" on the epidemic threshold: The strong heterogeneity can effectively improve the epidemic threshold (which means the disease outbreak requires a higher infection probability) when the awareness probability α is low, while the opposite effect takes place for high α. Meanwhile, the weak heterogeneity of the information layer is effective in suppressing the epidemic prevalence when the awareness probability is neither too high nor too low.

A model for the co-evolution of dynamic social networks and infectious disease dynamics

Recent research shows an increasing interest in the interplay of social networks and infectious diseases. Many studies either neglect explicit changes in health behavior or consider networks to be static, despite empirical evidence that people seek to distance themselves from diseases in social networks. We propose an adaptable steppingstone model that integrates theories of social network formation from sociology, risk perception from health psychology, and infectious diseases from epidemiology. We argue that networking behavior in the context of infectious diseases can be described as a trade-off between the benefits, efforts, and potential harm a connection creates. Agent-based simulations of a specific model case show that: (i) high (perceived) health risks create strong social distancing, thus resulting in low epidemic sizes; (ii) small changes in health behavior can be decisive for whether the outbreak of a disease turns into an epidemic or not; (iii) high benefits for social connections create more ties per agent, providing large numbers of potential transmission routes and opportunities for the disease to travel faster, and (iv) higher costs of maintaining ties with infected others reduce final size of epidemics only when benefits of indirect ties are relatively low. These findings suggest a complex interplay between social network, health behavior, and infectious disease dynamics. Furthermore, they contribute to solving the issue that neglect of explicit health behavior in models of disease spread may create mismatches between observed transmissibility and epidemic sizes of model predictions.

Advances, challenges and opportunities of phylogenetic and social network analysis using COVID-19 data

Coronavirus disease 2019 (COVID-19) has attracted research interests from all fields. Phylogenetic and social network analyses based on connectivity between either COVID-19 patients or geographic regions and similarity between syndrome coronavirus 2 (SARS-CoV-2) sequences provide unique angles to answer public health and pharmaco-biological questions such as relationships between various SARS-CoV-2 mutants, the transmission pathways in a community and the effectiveness of prevention policies. This paper serves as a systematic review of current phylogenetic and social network analyses with applications in COVID-19 research. Challenges in current phylogenetic network analysis on SARS-CoV-2 such as unreliable inferences, sampling bias and batch effects are discussed as well as potential solutions. Social network analysis combined with epidemiology models helps to identify key transmission characteristics and measure the effectiveness of prevention and control strategies. Finally, future new directions of network analysis motivated by COVID-19 data are summarized.

Game-theoretic modeling of collective decision making during epidemics

The spreading dynamics of an epidemic and the collective behavioral pattern of the population over which it spreads are deeply intertwined and the latter can critically shape the outcome of the former. Motivated by this, we design a parsimonious game-theoretic behavioral-epidemic model, in which an interplay of realistic factors shapes the coevolution of individual decision making and epidemics on a network. Although such a coevolution is deeply intertwined in the real world, existing models schematize population behavior as instantaneously reactive, thus being unable to capture human behavior in the long term. Our paradigm offers a unified framework to model and predict complex emergent phenomena, including successful collective responses, periodic oscillations, and resurgent epidemic outbreaks. The framework also allows us to provide analytical insights on the epidemic process and to assess the effectiveness of different policy interventions on ensuring a collective response that successfully eradicates the outbreak. Two case studies, inspired by real-world diseases, are presented to illustrate the potentialities of the proposed model.