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Zhou CS, Cao GL, Liu BF, Liu W, Ma WL, Ren NQ. Deciphering the reduction of antibiotic resistance genes (ARGs) during medium-chain fatty acids production from waste activated sludge: Driven by inhibition of ARGs transmission and shift of microbial community. JOURNAL OF HAZARDOUS MATERIALS 2024; 473:134676. [PMID: 38788579 DOI: 10.1016/j.jhazmat.2024.134676] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 02/18/2024] [Accepted: 05/20/2024] [Indexed: 05/26/2024]
Abstract
Medium-chain fatty acids (MCFAs) production from waste activated sludge (WAS) by chain extension (CE) is a promising technology. However, the effects and mechanisms of CE process on the fate of antibiotic resistance genes (ARGs) remain unclear. In this study, the results showed that the removal efficiency of ARGs was 81.15 % in CE process, suggesting its efficacy in reducing environmental risks. Further, the observed decrease in mobile genetic elements (MGEs) indicated that CE process restricted the horizontal gene transfer (HGT). Complementing this, the increase in soluble organic matters and extracellular 16 S rDNA confirmed that MCFAs production caused bacterial damage. Decreased intracellular ARGs and increased extracellular ARGs further revealed that MCFAs production impaired ARGs hosts, thereby limiting the vertical gene transfer (VGT) of ARGs. Shift of microbial community combined with co-occurrence network analysis demonstrated that functional bacteria without host potential for ARGs were enriched, but potential ARGs and MGEs hosts decreased, showing the role of functional bacterial phylogeny and selection pressure of MCFAs in reducing ARGs. Finally, partial least squares path model was used to systematic verify the mechanism of ARGs removal in CE process, which was attributed to the inhibition of ARGs transmission (HGT and VGT) and shift of microbial community.
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Affiliation(s)
- Chun-Shuang Zhou
- National-Local Joint Engineering Research Center for Biomass Energy Development and Utilization, School of Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Guang-Li Cao
- National-Local Joint Engineering Research Center for Biomass Energy Development and Utilization, School of Environment, Harbin Institute of Technology, Harbin 150090, China.
| | - Bing-Feng Liu
- National-Local Joint Engineering Research Center for Biomass Energy Development and Utilization, School of Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Wei Liu
- Heilongjiang Institute of Energy and Environment, Harbin 150007, China
| | - Wan-Li Ma
- National-Local Joint Engineering Research Center for Biomass Energy Development and Utilization, School of Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Nan-Qi Ren
- National-Local Joint Engineering Research Center for Biomass Energy Development and Utilization, School of Environment, Harbin Institute of Technology, Harbin 150090, China
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Allegrini M, Iocoli GA, Zabaloy MC. Combined use of digestate and inorganic fertilizer alleviates the burden of class 1 integrons in perennial ryegrass rhizosphere without compromising aerial biomass production. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024:10.1007/s11356-024-34279-6. [PMID: 38985425 DOI: 10.1007/s11356-024-34279-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Accepted: 07/02/2024] [Indexed: 07/11/2024]
Abstract
Antimicrobial resistance (AMR) is one of the main global health challenges. Anaerobic digestion (AD) can significantly reduce the burden of antibiotic resistance genes (ARGs) in animal manures. However, the reduction is often incomplete. The agronomic use of digestates requires assessments of their effects on soil ARGs. The objective of this study was to assess the effect of digestate on the abundance of ARGs and mobile genetic elements (MGEs) in the rhizosphere of ryegrass (Lolium perenne L.) and to determine whether half-dose replacement of digestate with urea (combined fertilizer) can be implemented as a safer approach while maintaining a similar biomass production. A greenhouse assay was conducted during 190 days under a completely randomized design with two experimental factors: fertilizer type (unfertilized control and fertilized treatments with equal N dose: digestate, urea and combined fertilizer) and sampling date (16 and 148 days after the last application). The results indicated that the digestate significantly increased the abundance of clinical class 1 integrons (intI1 gene) relative to the unfertilized control at both sampling dates (P < 0.05), while the combined fertilizer only increased them at the first sampling. Sixteen days after completing the fertilization scheme only the combined fertilizer and urea significantly increased the biomass production relative to the control (P < 0.05). Additionally, by the end of the assay, the combined fertilizer showed significantly lower levels of the macrolide-resistance gene ermB than digestate and a cumulative biomass similar to urea or digestate. Overall, the combined fertilizer can alleviate the burden of integrons and ermB while simultaneously improving biomass production.
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Affiliation(s)
- Marco Allegrini
- Centro de Recursos Naturales Renovables de la Zona Semiárida (CERZOS), Universidad Nacional del Sur (UNS)-CONICET, Bahía Blanca, Argentina
- Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR), Universidad Nacional de Rosario (UNR)-CONICET, Zavalla, Argentina
| | - Gastón Alejandro Iocoli
- Centro de Recursos Naturales Renovables de la Zona Semiárida (CERZOS), Universidad Nacional del Sur (UNS)-CONICET, Bahía Blanca, Argentina
- Departamento de Agronomía, Universidad Nacional del Sur, Bahía Blanca, Argentina
| | - María Celina Zabaloy
- Centro de Recursos Naturales Renovables de la Zona Semiárida (CERZOS), Universidad Nacional del Sur (UNS)-CONICET, Bahía Blanca, Argentina.
- Departamento de Agronomía, Universidad Nacional del Sur, Bahía Blanca, Argentina.
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3
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Porras-Socias P, Tomasino MP, Fernandes JP, De Menezes AB, Fernández B, Collins G, Alves MJ, Castro R, Gomes CR, Almeida CMR, Mucha AP. Removal of metals and emergent contaminants from liquid digestates in constructed wetlands for agricultural reuse. Front Microbiol 2024; 15:1388895. [PMID: 38903785 PMCID: PMC11187104 DOI: 10.3389/fmicb.2024.1388895] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2024] [Accepted: 05/17/2024] [Indexed: 06/22/2024] Open
Abstract
Given the increasing pressure on water bodies, it is imperative to explore sustainable methodologies for wastewater treatment and reuse. The simultaneous presence of multiples contaminants in complex wastewater, such as the liquid effluents from biogas plants, can compromise biological treatment effectiveness for reclaiming water. Vertical subsurface flow constructed wetlands were established as low-cost decentralized wastewater treatment technologies to treat the liquid fraction of digestate from municipal organic waste with metals, antibiotics, and antibiotic resistance genes, to allow its reuse in irrigation. Twelve lab-scale planted constructed wetlands were assembled with gravel, light expanded clay aggregate and sand, testing four different treating conditions (liquid digestate spiked with oxytetracycline, sulfadiazine, or ofloxacin, at 100 μg/ L, or without dosing) during 3 months. Physicochemical parameters (pH, chemical oxygen demand (COD), nutrients, metals, and antibiotics), the microbial communities dynamics (through 16S high-throughput sequencing) and antibiotic resistance genes removal (qPCR) were monitored in influents and effluents. Systems removed 85.8%-96.9% of organic matter (as COD), over 98.1% of ammonium and phosphate ions, and 69.3%-99.4% of nitrate and nitrite ions, with no significant differences between the presence or absence of antibiotics. Removal of Fe, Mn, Zn, Cu, Pb and Cr exceeded 82% in all treatment cycles. The treatment also removed oxytetracycline, sulfadiazine and ofloxacin over 99%, and decreased intl1, tetA, tetW, sul1 and qnrS gene copies. Nonetheless, after 3 months of ofloxacin dosing, qnrS gene started being detected. Removal processes relied on high HRT (14 days) and various mechanisms including sorption, biodegradation, and precipitation. Microbial community diversity in liquid digestate changed significantly after treatment in constructed wetlands with a decrease in the initial Firmicutes dominance, but with no clear effect of antibiotics on the microbial community structure. Removals above 85% and 94% were observed for Streptococcus and Clostridium, respectively. Results suggest that vertical subsurface flow constructed wetlands were a suitable technology for treating the liquid digestate to reuse it in irrigation agricultural systems, contributing to the circular bioeconomy concept. However, a more profound understanding of effective wastewater treatment strategies is needed to avoid antibiotic resistance genes dissemination.
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Affiliation(s)
- Pau Porras-Socias
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Matosinhos, Portugal
- Chemistry and Biochemistry Department, Faculty of Sciences, University of Porto, Porto, Portugal
- Microbiology, School of Biological and Chemical Sciences and Ryan Institute, University of Galway, Galway, Ireland
- Sustainability in Biosystems Programme, IRTA, Institute of Agrifood Research and Technology, Caldes de Montbui, Spain
| | - Maria Paola Tomasino
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Matosinhos, Portugal
| | - Joana P. Fernandes
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Matosinhos, Portugal
| | - Alexandre B. De Menezes
- Microbiology, School of Biological and Chemical Sciences and Ryan Institute, University of Galway, Galway, Ireland
| | - Belén Fernández
- Sustainability in Biosystems Programme, IRTA, Institute of Agrifood Research and Technology, Caldes de Montbui, Spain
| | - Gavin Collins
- Microbiology, School of Biological and Chemical Sciences and Ryan Institute, University of Galway, Galway, Ireland
| | - Maria João Alves
- TratoLixo—Tratamento de Resíduos Sólidos, E.I.M. S.A., São Domingos de Rana, Portugal
| | - Ricardo Castro
- TratoLixo—Tratamento de Resíduos Sólidos, E.I.M. S.A., São Domingos de Rana, Portugal
| | - Carlos R. Gomes
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Matosinhos, Portugal
- Chemistry and Biochemistry Department, Faculty of Sciences, University of Porto, Porto, Portugal
| | - C. Marisa R. Almeida
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Matosinhos, Portugal
- Chemistry and Biochemistry Department, Faculty of Sciences, University of Porto, Porto, Portugal
| | - Ana Paula Mucha
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Matosinhos, Portugal
- Biology Department, Faculty of Sciences, University of Porto, Porto, Portugal
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Shrivas VL, Choudhary AK, Hariprasad P, Sharma S. Transmission of antibiotic resistance through organic amendments in arable land: A 3-year field study with pigeonpea-wheat cropping system. JOURNAL OF HAZARDOUS MATERIALS 2024; 471:134378. [PMID: 38691926 DOI: 10.1016/j.jhazmat.2024.134378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Revised: 04/19/2024] [Accepted: 04/20/2024] [Indexed: 05/03/2024]
Abstract
The worldwide emergence of antimicrobial resistance (AMR) poses a substantial risk to human health and environmental stability. In agriculture, organic amendments (derived from organic sources such as manure, and plant residues) are beneficial in restoring soil properties and providing essential nutrients to crops but raise concerns about harboring antibiotic resistance, which emphasizes the need for vigilant monitoring and strategic interventions in their application. The current study assessed the impact of farming practices (organic and conventional) in a three-year field experiment with pigeonpea-wheat cropping system, focusing on the transmission of AMR using culture-dependent and -independent approaches, and soil nutrient content. Markers for antibiotic resistance genes (ARGs) (aminoglycoside-aacA, β-lactam-blaTEM, chloramphenicol-cmlA1, macrolide-ermB, sulfonamides-sul1, sul2, and tetracycline-tetO) and integrons (intl1 and intl2) were targeted using qPCR. Manure amendments, particularly FYM1, exhibited a higher abundance of copies of ARGs compared to the rhizospheric soil. Organic farming was associated with higher copies of intl2, sul1, blaTEM, and tetO genes, while conventional farming showed increased copies of sul2 and ermB genes in the rhizosphere. Significant positive correlations were observed among soil nutrient contents, ARGs, and MGEs. The notable prevalence of ARGs linked to manure amendments serves as a cautionary note, demanding responsible management practices.
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Affiliation(s)
- Vijay Laxmi Shrivas
- Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology Delhi, New Delhi 110016, India; Centre for Rural Development and Technology, Indian Institute of Technology Delhi, New Delhi 110016, India
| | - Anil K Choudhary
- Division of Agronomy, ICAR-Indian Agricultural Research Institute, New Delhi 110012, India
| | - P Hariprasad
- Centre for Rural Development and Technology, Indian Institute of Technology Delhi, New Delhi 110016, India
| | - Shilpi Sharma
- Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology Delhi, New Delhi 110016, India.
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Liu H, Zhang Z, Li X, Zhou T, Wang Z, Li J, Li Y, Wang Q. Temperature-phased anaerobic sludge digestion effectively removes antibiotic resistance genes in a full-scale wastewater treatment plant. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 924:171555. [PMID: 38485028 DOI: 10.1016/j.scitotenv.2024.171555] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Revised: 03/04/2024] [Accepted: 03/04/2024] [Indexed: 03/17/2024]
Abstract
Sludge is a major by-product and the final reservoir of antibiotic resistance genes (ARGs) in wastewater treatment plants (WWTPs). Temperature-phased anaerobic digestion (TPAD), consisting of thermophilic anaerobic digestion (AD) (55 °C) and mesophilic AD processes (37 °C), has been implemented in WWTPs for sludge reduction while improving the biomethane production. However, the impact of TPAD on the ARGs' fate is still undiscovered in lab-scale experiments and full-scale WWTPs. This study, for the first time, investigated the fate of ARGs during the TPAD process across three seasons in a full-size WWTP. Ten typical ARGs and one integrase gene of class 1 integron (intI1) involving ARGs horizontal gene transfer were examined in sludge before and after each step of the TPAD process. TPAD reduced aac(6')-Ib-cr, blaTEM, drfA1, sul1, sul2, ermb, mefA, tetA, tetB and tetX by 87.3-100.0 %. TPAD reduced the overall average absolute abundance of targeted ARGs and intI1 by 92.39 % and 92.50 %, respectively. The abundance of targeted ARGs in sludge was higher in winter than in summer and autumn before and after TPAD. During the TPAD processes, thermophilic AD played a major role in the removal of ARGs, contributing to >60 % removal of ARGs, while the subsequent mesophilic AD contributed to a further 31 % removal of ARGs. The microbial community analysis revealed that thermophilic AD reduced the absolute abundance of ARGs hosts, antibiotic resistant bacteria. In addition, thermophilic AD reduced the abundance of the intI1, while the intI1 did not reproduce during the mesophilic AD, also contributing to a decline in the absolute abundance of ARGs in TPAD. This study demonstrates that TPAD can effectively reduce the abundance of ARGs in sludge, which will suppress the transmission of ARGs from sludge into the natural environment and deliver environmental and health benefits to our society.
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Affiliation(s)
- Huan Liu
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, NSW 2007, Australia
| | - Zehao Zhang
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, NSW 2007, Australia
| | - Xuan Li
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, NSW 2007, Australia
| | - Ting Zhou
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, NSW 2007, Australia
| | - Zhenyao Wang
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, NSW 2007, Australia
| | - Jibin Li
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, NSW 2007, Australia
| | - Yi Li
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, NSW 2007, Australia
| | - Qilin Wang
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, NSW 2007, Australia.
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Visca A, Di Gregorio L, Clagnan E, Bevivino A. Sustainable strategies: Nature-based solutions to tackle antibiotic resistance gene proliferation and improve agricultural productivity and soil quality. ENVIRONMENTAL RESEARCH 2024; 248:118395. [PMID: 38307185 DOI: 10.1016/j.envres.2024.118395] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Revised: 01/29/2024] [Accepted: 01/30/2024] [Indexed: 02/04/2024]
Abstract
The issue of antibiotic resistance is now recognized by the World Health Organisation (WHO) as one of the major problems in human health. Although its effects are evident in the healthcare settings, the root cause should be traced back to the One Health link, extending from animals to the environment. In fact, the use of organic fertilizers in agroecosystems represents one, if not the primary, cause of the introduction of antibiotics and antibiotic-resistant bacteria into the soil. Since the concentrations of antibiotics introduced into the soil are residual, the agroecosystem has become a perfect environment for the selection and proliferation of antibiotic resistance genes (ARGs). The continuous influx of these emerging contaminants (i.e., antibiotics) into the agroecosystem results in the selection and accumulation of ARGs in soil bacteria, occasionally giving rise to multi-resistant bacteria. These bacteria may harbour ARGs related to various antibiotics on their plasmids. In this context, these bacteria can potentially enter the human sphere when individuals consume food from contaminated agroecosystems, leading to the acquisition of multi-resistant bacteria. Once introduced into the nosocomial environment, these bacteria pose a significant threat to human health. In this review, we analyse how the use of digestate as an organic fertilizer can mitigate the spread of ARGs in agroecosystems. Furthermore, we highlight how, according to European guidelines, digestate can be considered a Nature-Based Solution (NBS). This NBS not only has the ability to mitigate the spread of ARGs in agroecosystems but also offers the opportunity to further improve Microbial-Based Solutions (MBS), with the aim of enhancing soil quality and productivity.
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Affiliation(s)
- Andrea Visca
- Department for Sustainability, Biotechnologies and Agroindustry Division, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Via Anguillarese 301, 00123, Rome, Italy.
| | - Luciana Di Gregorio
- Department for Sustainability, Biotechnologies and Agroindustry Division, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Via Anguillarese 301, 00123, Rome, Italy
| | - Elisa Clagnan
- Department for Sustainability, Biotechnologies and Agroindustry Division, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Via Anguillarese 301, 00123, Rome, Italy
| | - Annamaria Bevivino
- Department for Sustainability, Biotechnologies and Agroindustry Division, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Via Anguillarese 301, 00123, Rome, Italy
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Proskynitopoulou V, Vourros A, Garagounis I, Toursidis PD, Lorentzou S, Kougias P, Zouboulis A, Panopoulos KD. Treatment of anaerobically digested pig manure by applying membrane processes for nutrient recovery and antibiotics removal. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024:10.1007/s11356-024-33313-x. [PMID: 38613762 DOI: 10.1007/s11356-024-33313-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Accepted: 04/10/2024] [Indexed: 04/15/2024]
Abstract
A combination of membrane processes was applied to treat the digestate produced after the anaerobic treatment of pig manure in a biogas plant, aiming towards the recovery of nutrients and effective water treatment for potential reuse. Initially, coarse filtration (sieving and microfiltration) was used to remove particles larger than 1 µm, followed by ultrafiltration, to reduce the suspended solids concentrations below 1 g/L. Subsequently, selective electrodialysis is employed to recover the main nutrient ions, primarily ammonium and potassium. The ion-depleted digestate is then fed to a reverse osmosis unit, where clean water was recovered, yielding a by-product (concentrate) stream enriched in phosphates and organics content. The presence of antibiotics and the concentrations of heavy metals were monitored during all treatment stages to assess their behavior/removal in the various membrane processes. The results indicate that almost 51% of the digestate could be recovered as water free from ions and antibiotics, suitable for reuse in the biogas plant for process needs and irrigation purposes. The selective electrodialysis process can recover 51% of initial NH4+ content (corresponding to 96% of the electrodialysis feed), while the remainder largely ended up in the ultrafiltration concentrate. A similar behavior was observed for the case of K+, while approximately 68% of the phosphates content was retained by the coarse filtration process, with another 24% remaining in the ultrafiltration concentrate and the remaining 8% in the reverse osmosis concentrate. Most of the antibiotics and heavy metals were retained by the coarse and ultrafiltration steps, with smaller amounts detected in the reverse osmosis concentrate.
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Affiliation(s)
- Vera Proskynitopoulou
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas, 57001, Thessaloniki, Greece.
- Chemical and Environmental Technology Laboratory, Department of Chemistry, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece.
| | - Anastasios Vourros
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas, 57001, Thessaloniki, Greece
| | - Ioannis Garagounis
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas, 57001, Thessaloniki, Greece
| | - Panagiotis Dimopoulos Toursidis
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas, 57001, Thessaloniki, Greece
| | - Souzana Lorentzou
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas, 57001, Thessaloniki, Greece
| | - Panagiotis Kougias
- Hellenic Agricultural Organisation-DEMETER, Soil and Water Resources Institute, 57001, Thessaloniki, Greece
| | - Anastasios Zouboulis
- Chemical and Environmental Technology Laboratory, Department of Chemistry, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
| | - Kyriakos D Panopoulos
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas, 57001, Thessaloniki, Greece
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Guo C, Lin S, Lyu T, Ma Y, Dong R, Liu S. Effect of reactor operation modes on mitigating antibiotic resistance genes (ARGs) and methane production from hydrothermally-pretreated pig manure. ENVIRONMENTAL RESEARCH 2024; 244:117894. [PMID: 38092236 DOI: 10.1016/j.envres.2023.117894] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Revised: 12/05/2023] [Accepted: 12/06/2023] [Indexed: 12/21/2023]
Abstract
Numerous efforts have been made to enhance the performance of anaerobic digestion (AD) for accelerating renewable energy generation, however, it remains unclear whether the intensified measures could enhance the proliferation and transmissions of antibiotic resistance genes (ARGs) in the system. This study assessed the impact of an innovative pig manure AD process, which includes hydrothermal pretreatment (HTP) and a two-stage configuration with separated acidogenic and methanogenic phases, on biomethane (CH4) production and ARGs dynamics. Results showed that HTP significantly increase CH4 production from 0.65 to 0.75 L/L/d in conventional single-stage AD to 0.82 and 0.91 L/L/d in two-stage AD. This improvement correlated with a rise in the relative abundance of Methanosarcina, a key methanogenesis microorganism. In the two-stage AD, the methanogenic stage offered an ideal environment for methanogens growth, resulting in substantially faster and higher CH4 production by about 10% compared to single-stage AD. Overall, the combined use of HTP and the two-stage AD configuration enhanced CH4 production by 40% compared to traditional single-stage AD. The abundance and diversity of ARGs were significantly reduced in the acidogenic reactors after HTP. However, the ARGs levels increased by about two times in the following methanogenesis stage and reached similar or higher levels than in single stage AD. The erm(F), erm(G), ant(6)-Ia, tet(W), mef(A) and erm(B) were the six main ARGs with significant differences in relative abundances in various treatments. The two-stage AD mode could better remove sul2, but it also had a rebound which elevated the risk of ARGs to the environment and human health. Network analysis identified pH and TVFAs as critical factors driving microbial communities and ARG proliferation in the new AD process. With the results, this study offers valuable insights into the trade-offs between AD performance enhancement and ARG-related risks, pinpointing essential areas for future research and practical improvements.
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Affiliation(s)
- Chunchun Guo
- College of Engineering, China Agricultural University, Beijing, 100083, PR China
| | - Shupeng Lin
- College of Engineering, China Agricultural University, Beijing, 100083, PR China
| | - Tao Lyu
- School of Water, Energy and Environment, Cranfield University, College Road, Cranfield, Bedfordshire, MK43 0AL, United Kingdom
| | - Yanfang Ma
- College of Engineering, China Agricultural University, Beijing, 100083, PR China
| | - Renjie Dong
- College of Engineering, China Agricultural University, Beijing, 100083, PR China
| | - Shan Liu
- College of Engineering, China Agricultural University, Beijing, 100083, PR China; Yantai Research Institute, China Agricultural University, Yantai, 264670, PR China.
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Proskynitopoulou V, Garagounis I, Vourros A, Dimopoulos Toursidis P, Lorentzou S, Zouboulis A, Panopoulos K. Nutrient recovery from digestate: Pilot test experiments. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 353:120166. [PMID: 38280247 DOI: 10.1016/j.jenvman.2024.120166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Revised: 01/04/2024] [Accepted: 01/20/2024] [Indexed: 01/29/2024]
Abstract
A series of technologies have been employed in pilot-scale to process digestate, i.e. the byproduct remaining after the anaerobic digestion of agricultural and other wastes, with the aim of recovering nutrients and reducing the load of solids and organics from it, hence improving the quality of digestate for potential subsequent reuse. In this case the digestate originated from a mixture of dairy and animal wastes and a small amount of agricultural wastes. It was processed by the application of several treatments, applied in series, i.e. microfiltration, ultrafiltration, reverse osmosis, selective electrodialysis and combined UV/ozonation. The initially applied membrane filtration methods (micro- and ultra-filtration) removed most of the suspended solids and macromolecules with a combined efficiency of more than 80%, while the reverse osmosis (at the end) removed almost all the remaining solutes (85-100%), producing sufficiently clarified water, appropriate for potential reuse. In the selective electrodialysis unit over 95% of ammonium and potassium were recovered from the feed, along with 55% of the phosphates. Of the latter, 75% was retrieved in the form of struvite.
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Affiliation(s)
- Vera Proskynitopoulou
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas (CERTH), 6th km Charilaou-Thermi Road, Thermi, P.O. Box: 60361, 57001 Thessaloniki, Greece; Laboratory of Chemical & Environmental Technology, Department of Chemistry, Aristotle University of Thessaloniki, Thessaloniki, Greece.
| | - Ioannis Garagounis
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas (CERTH), 6th km Charilaou-Thermi Road, Thermi, P.O. Box: 60361, 57001 Thessaloniki, Greece
| | - Anastasios Vourros
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas (CERTH), 6th km Charilaou-Thermi Road, Thermi, P.O. Box: 60361, 57001 Thessaloniki, Greece
| | - Panagiotis Dimopoulos Toursidis
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas (CERTH), 6th km Charilaou-Thermi Road, Thermi, P.O. Box: 60361, 57001 Thessaloniki, Greece
| | - Souzana Lorentzou
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas (CERTH), 6th km Charilaou-Thermi Road, Thermi, P.O. Box: 60361, 57001 Thessaloniki, Greece
| | - Anastasios Zouboulis
- Laboratory of Chemical & Environmental Technology, Department of Chemistry, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Kyriakos Panopoulos
- ARTEMIS Laboratory, Chemical Process and Energy Resources Institute, Centre for Research & Technology Hellas (CERTH), 6th km Charilaou-Thermi Road, Thermi, P.O. Box: 60361, 57001 Thessaloniki, Greece
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10
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Ruan L, Ye K, Wang Z, Xiong A, Qiao R, Zhang J, Huang Z, Cai M, Yu C. Characteristics of gut bacterial microbiota of black soldier fly (Diptera: Stratiomyidae) larvae effected by typical antibiotics. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2024; 270:115861. [PMID: 38154153 DOI: 10.1016/j.ecoenv.2023.115861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Revised: 12/12/2023] [Accepted: 12/17/2023] [Indexed: 12/30/2023]
Abstract
As agents in an emerging technology, Hermetia illucens (Linnaeus, 1758) (Diptera: Stratiomyidae) larvae, black soldier fly, have shown exciting potential for degrading antibiotics in organic solid waste, a process for which gut microorganisms play an important role. This study investigated the characteristics of larval gut bacterial communities effected by typical antibiotics. Initially, antibiotics significantly reduced the diversity of gut bacterial species. After 8 days, diversity recovered to similar to that of the control group in the chlortetracycline, tylosin, and sulfamethoxazole groups. Proteobacteria, Firmicutes, and Actinobacteriota were the dominant phyla at the initial BSFL gut. However, after 4 days treatment, the proportion of Actinobacteriota significantly decreased, but Bacteroidota notably increased. During the conversion process, 18, 18, 17, 21, and 19 core genera were present in the chlortetracycline, sulfamethoxazole, tylosin, norfloxacin, and gentamicin groups, respectively. Pseudomonas, Actinomyces, Morganella, Providencia and Klebsiella might be the important genera with extraordinary resistance and degradation to antibiotics. Statistical analyses of COGs showed that antibiotics changed the microbial community functions of BSFL gut. Compared with the control group, (i) the chlortetracycline, sulfamethoxazole, and tylosin groups showed significant increase in the classification functions of transcription, RNA processing and modification,and so on, (ii) the norfloxacin and gentamicin groups showed significant increase in defense mechanisms and other functions. Note that we categorized the response mechanisms of these classification functions to antibiotics into resistance and degradation. This provides a new perspective to deeply understand the joint biodegradation behavior of antibiotics in environments, and serves as an important reference for further development and utilization of microorganisms-assisted larvae for efficient degradation of antibiotics.
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Affiliation(s)
- Linsen Ruan
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China
| | - Kaiyu Ye
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China
| | - Zhicheng Wang
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China
| | - Anqi Xiong
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China
| | - Rong Qiao
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China
| | - Jibin Zhang
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, National Engineering Research Centre of Microbial Pesticides, Huazhong Agricultural University, Wuhan 430070, China
| | - Zhiyong Huang
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center of Synthetic Biology, Tianjin 300308, China.
| | - Minmin Cai
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, National Engineering Research Centre of Microbial Pesticides, Huazhong Agricultural University, Wuhan 430070, China.
| | - Chan Yu
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China.
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11
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Gurmessa B, Cocco S, Ashworth AJ, Udawatta RP, Cardelli V, Ilari A, Serrani D, Fornasier F, Del Gatto A, Pedretti EF, Corti G. Short term effects of digestate and composted digestate on soil health and crop yield: Implications for sustainable biowaste management in the bioenergy sector. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 906:167208. [PMID: 37730036 DOI: 10.1016/j.scitotenv.2023.167208] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Revised: 09/15/2023] [Accepted: 09/17/2023] [Indexed: 09/22/2023]
Abstract
Composting mitigates environmental risks associated with using solid digestate as fertilizer. However, evidence is lacking on benefits of using composted digestate as fertilizer in enhancing soil health and increasing agronomic yield compared to non-composted digestate (hereafter, digestate). A field study was conducted consisting of digestate, composted digestate, co-composted digestate with biogas feedstocks (corn [Zea mays L.] silage, poultry litter, corn silage + poultry litter or food processing by-product), inorganic nitrogen fertilizer, and control (no treatment applied) on soil microbial biomass, enzyme activities (EA), soil organic carbon (SOC), bioavailable P (P), total nitrogen (TN), soil health index (SHI), and sunflower (Helianthus annuus L.) yield. The Partial Least Square Path Model (PLS-PM) was used to predict: 1) nutrient cycling in response to changes in microbial growth and EA and 2) agronomic yield in response to SHI and soil nutrients dynamics. Composted digestate had equivalent soil health benefits with most of co-composted materials and digestate, albeit agronomic yield was greatest with composted digestate, which was 40 % and 100 % greater than with inorganic nitrogen fertilizer and digestate, respectively, indicating composted digestate's potential to replace the synthetic N fertilizer. Moreover, composts from a sole digestate, rather than the ones from co-composted with fresh feedsstocks, can be promising organic amendments and fertilizers for growing sunflower. The PLS-PM model identified that triggered microbial biomass growth and EA, following digestate and composted digestate applications, catalyzed organic matter decomposition, resulting in enhanced nutrients contents and soil health. However, the model revealed that improved SHI did not predict agronomic yield, as opposed to P and TN, suggesting agronomic performance may have been more sensitive to changes in specific soil nutrients status than the overall soil health condition. We conclude that the benefits of composted digestate as fertilizer hint the significance of digestate valorization via post-digestate composting and compost utilization for sustainability of the bioenergy sector.
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Affiliation(s)
- Biyensa Gurmessa
- The Center for Agroforestry, School of Natural Resources, 302 Anheuser-Busch Natural Resources Building, University of Missouri-Columbia, Columbia, MO 65211, USA; Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy.
| | - Stefania Cocco
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy
| | - Amanda J Ashworth
- USDA-ARS, Poultry Production and Product Safety Research Unit, 1260 W. Maple St., Fayetteville, AR 72701, USA
| | - Ranjith P Udawatta
- The Center for Agroforestry, School of Natural Resources, 302 Anheuser-Busch Natural Resources Building, University of Missouri-Columbia, Columbia, MO 65211, USA
| | - Valeria Cardelli
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy
| | - Alessio Ilari
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy
| | - Dominique Serrani
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy
| | - Flavio Fornasier
- Council for Agricultural Research and Economics, Research Centre for Viticulture and Enology (CREA-VE), 34170 Gorizia, Italy
| | - Andrea Del Gatto
- Council for Agricultural Research and Economics, Research Centre for Cereals and Industrial Crops (CREA-CI), 60027 Osimo, AN, Italy
| | - Ester Foppa Pedretti
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy
| | - Giuseppe Corti
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy; Council for Agricultural Research and Economics, Research Centre for Agriculture and Environment, oo184 Rome, Italy
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12
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Endale H, Mathewos M, Abdeta D. Potential Causes of Spread of Antimicrobial Resistance and Preventive Measures in One Health Perspective-A Review. Infect Drug Resist 2023; 16:7515-7545. [PMID: 38089962 PMCID: PMC10715026 DOI: 10.2147/idr.s428837] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Accepted: 10/24/2023] [Indexed: 07/04/2024] Open
Abstract
Antimicrobial resistance, referring to microorganisms' capability to subsist and proliferate even when there are antimicrobials is a foremost threat to public health globally. The appearance of antimicrobial resistance can be ascribed to anthropological, animal, and environmental factors. Human-related causes include antimicrobial overuse and misuse in medicine, antibiotic-containing cosmetics and biocides utilization, and inadequate sanitation and hygiene in public settings. Prophylactic and therapeutic antimicrobial misuse and overuse, using antimicrobials as feed additives, microbes resistant to antibiotics and resistance genes in animal excreta, and antimicrobial residue found in animal-origin food and excreta are animals related contributive factors for the antibiotic resistance emergence and spread. Environmental factors including naturally existing resistance genes, improper disposal of unused antimicrobials, contamination from waste in public settings, animal farms, and pharmaceutical industries, and the use of agricultural and sanitation chemicals facilitatet its emergence and spread. Wildlife has a plausible role in the antimicrobial resistance spread. Adopting a one-health approach involving using antimicrobials properly in animals and humans, improving sanitation in public spaces and farms, and implementing coordinated governmental regulations is crucial for combating antimicrobial resistance. Collaborative and cooperative involvement of stakeholders in public, veterinary and ecological health sectors is foremost to circumvent the problem effectively.
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Affiliation(s)
- Habtamu Endale
- School of Veterinary Medicine, Wolaita Sodo University, Wolaita Sodo, Ethiopia
| | - Mesfin Mathewos
- School of Veterinary Medicine, Wachemo University, Wachemo, Ethiopia
| | - Debela Abdeta
- College of Veterinary Medicine and Agriculture, Addis Ababa University, Bishoftu, Ethiopia
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13
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Zhao Z, Yang C, Gao B, Wu Y, Ao Y, Ma S, Jiménez N, Zheng L, Huang F, Tomberlin JK, Ren Z, Yu Z, Yu C, Zhang J, Cai M. Insights into the reduction of antibiotic-resistant bacteria and mobile antibiotic resistance genes by black soldier fly larvae in chicken manure. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2023; 266:115551. [PMID: 37832484 DOI: 10.1016/j.ecoenv.2023.115551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Revised: 09/20/2023] [Accepted: 10/04/2023] [Indexed: 10/15/2023]
Abstract
The increasing prevalence of antibiotic-resistant bacteria (ARB) from animal manure has raised concerns about the potential threats to public health. The bioconversion of animal manure with insect larvae, such as the black soldier fly larvae (BSFL, Hermetia illucens [L.]), is a promising technology for quickly attenuating ARB while also recycling waste. In this study, we investigated BSFL conversion systems for chicken manure. Using metagenomic analysis, we tracked ARB and evaluated the resistome dissemination risk by investigating the co-occurrence of antibiotic resistance genes (ARGs), mobile genetic elements (MGEs), and bacterial taxa in a genetic context. Our results indicated that BSFL treatment effectively mitigated the relative abundance of ARB, ARGs, and MGEs by 34.9%, 53.3%, and 37.9%, respectively, within 28 days. Notably, the transferable ARGs decreased by 30.9%, indicating that BSFL treatment could mitigate the likelihood of ARG horizontal transfer and thus reduce the risk of ARB occurrence. In addition, the significantly positive correlation links between antimicrobial concentration and relative abundance of ARB reduced by 44.4%. Moreover, using variance partition analysis (VPA), we identified other bacteria as the most important factor influencing ARB, explaining 20.6% of the ARB patterns. Further analysis suggested that antagonism of other bacteria on ARB increased by 1.4 times, while nutrient competition on both total nitrogen and crude fat increased by 2.8 times. Overall, these findings provide insight into the mechanistic understanding of ARB reduction during BSFL treatment of chicken manure and provide a strategy for rapidly mitigating ARB in animal manure.
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Affiliation(s)
- Zhengzheng Zhao
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China
| | - Chongrui Yang
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China
| | - Bingqi Gao
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China
| | - Yushi Wu
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China
| | - Yue Ao
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, PR China
| | - Shiteng Ma
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China
| | - Núria Jiménez
- Department of Chemical Engineering, Vilanova i la Geltrú School of Engineering (EPSEVG), Universitat Politècnica de Catalunya·BarcelonaTech, Vilanova i la Geltrú 08800, Spain
| | - Longyu Zheng
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China
| | - Feng Huang
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China
| | | | - Zhuqing Ren
- Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China; Key Laboratory of Agriculture Animal Genetics, Breeding and Reproduction of the Ministry of Education, College of Animal Science, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Ziniu Yu
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China
| | - Chan Yu
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, PR China
| | - Jibin Zhang
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China.
| | - Minmin Cai
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, PR China.
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14
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Moradi N, Vazquez CL, Hernandez HG, Brdjanovic D, van Loosdrecht MCM, Rincón FR. Removal of contaminants of emerging concern from the supernatant of anaerobically digested sludge by O 3 and O 3/H 2O 2: Ozone requirements, effects of the matrix, and toxicity. ENVIRONMENTAL RESEARCH 2023; 235:116597. [PMID: 37442255 DOI: 10.1016/j.envres.2023.116597] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2023] [Revised: 07/05/2023] [Accepted: 07/07/2023] [Indexed: 07/15/2023]
Abstract
Digestate is a rich source of nutrients that can be applied in agricultural fields as fertilizer or irrigation water. However, most of the research about application of digestate have focused on its agronomic properties and neglected the potential harm of the presence of contaminants of emerging concern (CECs). Aadvanced oxidation processes (AOPs) have proved to be effective for removing these compounds from drinking water, yet there are some constrains to treat wastewater and digestate mainly due to their complex matrix. In this study, the feasibility to remove different CECs from digestate using O3 and O3/H2O2 was assessed, and the general effect of the matrix in the oxidation was explained. While the lab-scale ozonation provided an ozone dose of 1.49 mg O3/mg DOC in 5 h treatment, almost all the compounds were removed at a lower ozone dose of maximum 0.48 mg O3/mg DOC; only ibuprofen required a higher dose of 1.1 mg O3/mg DOC to be oxidized. The digestate matrix slowed down the kinetic ozonation rate to approximately 1% compared to the removal rate in demineralized water. The combined treatment (O3/H2O2) showed the additional contribution of H2O2 by decreasing the ozone demand by 59-75% for all the compounds. The acute toxicity of the digestate, measured by the inhibition of Vibrio fisheries luminescence, decreased by 18.1% during 5 h ozonation, and by 34% during 5 h O3/H2O2 treatment. Despite the high ozone consumption, the ozone dose (mg O3/mg DOC) required to remove all CECs from digestate supernatant was in the range or lower than what has been reported for other (waste-)water matrix, implying that ozonation can be considered as a post-AD treatment to produce cleaner stream for agricultural purposes.
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Affiliation(s)
- Nazanin Moradi
- Water Supply, Sanitation and Environmental Engineering Department, IHE Delft Institute for Water Education, Westvest 7, 2611 AX Delft, the Netherlands; Department of Biotechnology, Delft University of Technology, van der Maasweg 9, 2629 HZ, Delft, the Netherlands.
| | - Carlos Lopez Vazquez
- Water Supply, Sanitation and Environmental Engineering Department, IHE Delft Institute for Water Education, Westvest 7, 2611 AX Delft, the Netherlands
| | - Hector Garcia Hernandez
- Water Supply, Sanitation and Environmental Engineering Department, IHE Delft Institute for Water Education, Westvest 7, 2611 AX Delft, the Netherlands
| | - Damir Brdjanovic
- Water Supply, Sanitation and Environmental Engineering Department, IHE Delft Institute for Water Education, Westvest 7, 2611 AX Delft, the Netherlands; Department of Biotechnology, Delft University of Technology, van der Maasweg 9, 2629 HZ, Delft, the Netherlands
| | - Mark C M van Loosdrecht
- Department of Biotechnology, Delft University of Technology, van der Maasweg 9, 2629 HZ, Delft, the Netherlands
| | - Francisco Rubio Rincón
- Water Supply, Sanitation and Environmental Engineering Department, IHE Delft Institute for Water Education, Westvest 7, 2611 AX Delft, the Netherlands
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15
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Li Y, An X, Liu G, Li G, Yin Y. The fate of sulfonamides in microenvironments of rape and hot pepper rhizosphere soil system. INTERNATIONAL JOURNAL OF PHYTOREMEDIATION 2023; 26:159-168. [PMID: 37424147 DOI: 10.1080/15226514.2023.2231552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/11/2023]
Abstract
Sulfonamides (SAs) in agricultural soils can be degraded in rhizosphere, but can also be taken up by vegetables, which thereby poses human health and ecological risks. A glasshouse experiment was conducted using multi-interlayer rhizoboxes to investigate the fate of three SAs in rape and hot pepper rhizosphere soil systems to examine the relationship between the accumulation and their physicochemical processes. SAs mainly entered pepper shoots in which the accumulation ranged from 0.40 to 30.64 mg kg-1, while SAs were found at high levels in rape roots ranged from 3.01 to 16.62 mg kg-1. The BCFpepper shoot exhibited a strong positive linear relationship with log Dow, while such relationship was not observed between other bioconcentration factors (BCFs) and log Dow. Other than lipophilicity, the dissociation of SAs may also influence the uptake and translocation process. Larger TF and positive correlation with log Dow indicate preferential translocation of pepper SAs. There was a significant (p < 0.05) dissipation gradient of SAs observed away from the vegetable roots. In addition, pepper could uptake more SAs under solo exposure, while rape accumulated more SAs under combined exposure. When SAs applied in mixture, competition between SAs might occur to influence the translocation and dissipation patterns of SAs.
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Affiliation(s)
- Yaning Li
- Laboratory of Environmental Science and Engineering, Nankai University BinHai College, Tianjin, China
| | - Xinlong An
- OceanCollege, Hebei Agricultural University, Qinhuangdao, China
| | - Gang Liu
- Laboratory of Environmental Science and Engineering, Nankai University BinHai College, Tianjin, China
| | - Guodong Li
- Laboratory of Environmental Science and Engineering, Nankai University BinHai College, Tianjin, China
| | - Yanyan Yin
- Laboratory of Environmental Science and Engineering, Nankai University BinHai College, Tianjin, China
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16
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Zhao Z, Yu C, Yang C, Gao B, Jiménez N, Wang C, Li F, Ao Y, Zheng L, Huang F, Tomberlin JK, Ren Z, Yu Z, Zhang J, Cai M. Mitigation of antibiotic resistome in swine manure by black soldier fly larval conversion combined with composting. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 879:163065. [PMID: 36966826 DOI: 10.1016/j.scitotenv.2023.163065] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Revised: 03/20/2023] [Accepted: 03/21/2023] [Indexed: 05/17/2023]
Abstract
The increasing prevalence of antibiotic resistance genes (ARGs) in animal manure has attracted considerable attention because of their potential contribution to the development of multidrug resistance worldwide. Insect technology may be a promising alternative for the rapid attenuation of ARGs in manure; however, the underlying mechanism remains unclear. This study aimed to evaluate the effects of black soldier fly (BSF, Hermetia illucens [L.]) larvae conversion combined with composting on ARGs dynamics in swine manure and to uncover the mechanisms through metagenomic analysis. Compared to natural composting (i.e. without BSF), BSFL conversion combined with composting reduced the absolute abundance of ARGs by 93.2 % within 28 days. The rapid degradation of antibiotics and nutrient reformulation during BSFL conversion combined with composting indirectly altered manure bacterial communities, resulting in a lower abundance and richness of ARGs. The number of main antibiotic-resistant bacteria (e.g., Prevotella, Ruminococcus) decreased by 74.9 %, while their potential antagonistic bacteria (e.g., Bacillus, Pseudomonas) increased by 128.7 %. The number of antibiotic-resistant pathogenic bacteria (e.g., Selenomonas, Paenalcaligenes) decreased by 88.3 %, and the average number of ARGs carried by each human pathogenic bacterial genus declined by 55.8 %. BSF larvae gut microbiota (e.g., Clostridium butyricum, C. bornimense) could help reduce the risk of multidrug-resistant pathogens. These results provide insight into a novel approach to mitigate multidrug resistance from the animal industry in the environment by using insect technology combined with composting, in particular in light of the global "One Health" requirements.
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Affiliation(s)
- Zhengzheng Zhao
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China
| | - Chan Yu
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China
| | - Chongrui Yang
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China
| | - Bingqi Gao
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China
| | - Núria Jiménez
- Department of Chemical Engineering, Vilanova i la Geltrú School of Engineering (EPSEVG), Universitat Politècnica de Catalunya · BarcelonaTech, Vilanova i la Geltrú 08800, Spain
| | - Chen Wang
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China
| | - Fang Li
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China
| | - Yue Ao
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China
| | - Longyu Zheng
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China
| | - Feng Huang
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China
| | | | - Zhuqing Ren
- Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China; Key Laboratory of Agriculture Animal Genetics, Breeding and Reproduction of the Ministry of Education, College of Animal Science, Huazhong Agricultural University, Wuhan, Hubei 430070, China
| | - Ziniu Yu
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China
| | - Jibin Zhang
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China
| | - Minmin Cai
- State Key Laboratory of Agricultural Microbiology, National Engineering Research Center of Microbial Pesticides, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China.
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17
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Efriem S, Sabastian C, Blum S, Fleker M, Mabjeesh SJ, Britzi M. Resistant Bacteria in Broiler Litter Used as Ruminant Feed: Effect of Biotic Treatment. Antibiotics (Basel) 2023; 12:1093. [PMID: 37508189 PMCID: PMC10376094 DOI: 10.3390/antibiotics12071093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Revised: 06/15/2023] [Accepted: 06/22/2023] [Indexed: 07/30/2023] Open
Abstract
The use of antimicrobial drugs and coccidiostats in poultry farming is widespread, with a significant proportion of these drugs being excreted and released into the environment. The residues of such drugs in poultry litter (PL) can result in the development of antibiotic-resistant bacteria. The impact of different biotic treatments (aerobic, anaerobic, and stacking) on broiler litter (BL) before its use as animal feed has not been studied extensively, nor have the differences between antimicrobial-dependent and independent broiler farms been investigated. This study aimed to determine the resistant bacteria in BL used as ruminant feed before and after litter treatment. The results show that the most resistant bacteria before BL treatment were the Enterococcus species. This study also found that the quantity of amoxicillin-resistant Enterococcus detected in samples from antimicrobial-dependent farms was significantly higher than in those from antimicrobial-independent farms. Additionally, 14% of bacteria were multi-resistant to tetracycline, sulfafurazole, and erythromycin in antimicrobial-independent farm litters, significantly lower than those measured in antimicrobial-dependent broiler farm litter. This study highlights the importance of better understanding, regulating, managing, and using animal waste appropriately to reduce the number of antibiotic-resistant bacteria and minimize the use of antimicrobials that carry high risks for animals, humans, and the environment.
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Affiliation(s)
- Solomon Efriem
- The Robert H. Smith Faculty of Agriculture, Food and Environment, Hebrew University, Rehovot 7610001, Israel; (S.E.)
- National Residue Control Laboratory, Kimron Veterinary Institute, Beit Dagan 5025001, Israel;
| | - Chris Sabastian
- The Robert H. Smith Faculty of Agriculture, Food and Environment, Hebrew University, Rehovot 7610001, Israel; (S.E.)
| | - Shlomo Blum
- Bacteriology and Mycology Laboratory, Kimron Veterinary Institute, Beit Dagan 5025001, Israel
| | - Marcelo Fleker
- Bacteriology and Mycology Laboratory, Kimron Veterinary Institute, Beit Dagan 5025001, Israel
| | - Sameer J. Mabjeesh
- The Robert H. Smith Faculty of Agriculture, Food and Environment, Hebrew University, Rehovot 7610001, Israel; (S.E.)
| | - Malka Britzi
- National Residue Control Laboratory, Kimron Veterinary Institute, Beit Dagan 5025001, Israel;
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Tripathi A, Kumar D, Chavda P, Rathore DS, Pandit R, Blake D, Tomley F, Joshi M, Joshi CG, Dubey SK. Resistome profiling reveals transmission dynamics of antimicrobial resistance genes from poultry litter to soil and plant. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 327:121517. [PMID: 36990341 DOI: 10.1016/j.envpol.2023.121517] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2022] [Revised: 02/26/2023] [Accepted: 03/25/2023] [Indexed: 06/19/2023]
Abstract
Poultry farming is a major livelihood in South and Southeast Asian economies where it is undergoing rapid intensification to meet the growing human demand for dietary protein. Intensification of poultry production systems is commonly supported by increased antimicrobial drug use, risking greater selection and dissemination of antimicrobial resistance genes (ARGs). Transmission of ARGs through food chains is an emerging threat. Here, we investigated transmission of ARGs from chicken (broiler and layer) litter to soil and Sorghum bicolor (L.) Moench plants based on field and pot experiments. The results demonstrate ARGs transmission from poultry litter to plant systems under field as well as experimental pot conditions. The most common ARGs could be tracked for transmission from litter to soil to plants were identified as detected were cmx, ErmX, ErmF, lnuB, TEM-98 and TEM-99, while common microorganisms included Escherichia coli, Staphylococcus aureus, Enterococcus faecium, Pseudomonas aeruginosa, and Vibrio cholerae. Using next generation sequencing and digital PCR assays we detected ARGs transmitted from poultry litter in both the roots and stems of S. bicolor (L.) Moench plants. Poultry litter is frequently used as a fertiliser because of its high nitrogen content; our studies show that ARGs can transmit from litter to plants and illustrates the risks posed to the environment by antimicrobial treatment of poultry. This knowledge is useful for formulating intervention strategies that can reduce or prevent ARGs transmission from one value chain to another, improving understanding of impacts on human and environmental health. The research outcome will help in further understanding the transmission and risks posed by ARGs from poultry to environmental and human/animal health.
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Affiliation(s)
- Animesh Tripathi
- Department of Botany, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, 221005, India
| | - Dinesh Kumar
- Gujarat Biotechnology Research Centre (GBRC), Department of Science and Technology; (DST), Government of Gujarat, Gandhinagar, Gujarat, 382011, India
| | - Priyank Chavda
- Gujarat Biotechnology Research Centre (GBRC), Department of Science and Technology; (DST), Government of Gujarat, Gandhinagar, Gujarat, 382011, India
| | - Dalip Singh Rathore
- Gujarat Biotechnology Research Centre (GBRC), Department of Science and Technology; (DST), Government of Gujarat, Gandhinagar, Gujarat, 382011, India
| | - Ramesh Pandit
- Gujarat Biotechnology Research Centre (GBRC), Department of Science and Technology; (DST), Government of Gujarat, Gandhinagar, Gujarat, 382011, India
| | - Damer Blake
- Pathobiology and Population Sciences, The Royal Veterinary College, Hawkshead Lane, North Mymms, Hertfordshire, UK
| | - Fiona Tomley
- Pathobiology and Population Sciences, The Royal Veterinary College, Hawkshead Lane, North Mymms, Hertfordshire, UK
| | - Madhvi Joshi
- Gujarat Biotechnology Research Centre (GBRC), Department of Science and Technology; (DST), Government of Gujarat, Gandhinagar, Gujarat, 382011, India
| | - Chaitanya G Joshi
- Gujarat Biotechnology Research Centre (GBRC), Department of Science and Technology; (DST), Government of Gujarat, Gandhinagar, Gujarat, 382011, India
| | - Suresh Kumar Dubey
- Department of Botany, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, 221005, India.
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Tian T, Yang X, Liu S, Han Z, Qiao W, Li J, Yang M, Zhang Y. Hyper-thermophilic anaerobic pretreatment enhances the removal of transferable oxazolidinone and phenicol cross-resistance gene optrA in enterococci. WASTE MANAGEMENT (NEW YORK, N.Y.) 2023; 167:92-102. [PMID: 37245400 DOI: 10.1016/j.wasman.2023.05.026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2023] [Revised: 05/08/2023] [Accepted: 05/18/2023] [Indexed: 05/30/2023]
Abstract
The extensive use of florfenicol in poultry industry results in the emergence of optrA gene, which also confers resistance to clinically important antibiotic linezolid. This study investigated the occurrence, genetic environments, and removal of optrA in enterococci in mesophilic (37 °C) and thermophilic (55 °C) anaerobic digestion systems, and a hyper-thermophilic (70 °C) anaerobic pretreatment system for chicken waste. A total of 331 enterococci were isolated and analyzed for antibiotic resistance against linezolid and florfenicol. The optrA gene was frequently detected in enterococci from chicken waste (42.7%) and effluents from mesophilic (72%) and thermophilic (56.8%) reactors, but rarely detected in the hyper-thermophilic (5.8%) effluent. Whole-genome sequencing revealed that optrA-carrying Enterococcus faecalis sequence type (ST) 368 and ST631 were the dominant clones in chicken waste, and they remained dominant in mesophilic and thermophilic effluents, respectively. The plasmid-borne IS1216E-fexA-optrA-erm(A)-IS1216E was the core genetic element for optrA in ST368, whereas chromosomal Tn554-fexA-optrA was the key one in ST631. IS1216E might play a key role in horizontal transfer of optrA due to its presence in different clones. Hyper-thermophilic pretreatment removed enterococci with plasmid-borne IS1216E-fexA-optrA-erm(A)-IS1216E. A hyper-thermophilic pretreatment is recommended for chicken waste to mitigate dissemination of optrA from animal waste to the environment.
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Affiliation(s)
- Tiantian Tian
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiaoxiao Yang
- Department of Municipal and Environmental Engineering, Beijing Jiaotong University, Beijing 100044, China
| | - Shihai Liu
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ziming Han
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Wei Qiao
- College of Engineering, China Agricultural University, Beijing 100083, China
| | - Jiuyi Li
- Department of Municipal and Environmental Engineering, Beijing Jiaotong University, Beijing 100044, China
| | - Min Yang
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yu Zhang
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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20
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Zubair M, Li Z, Zhu R, Wang J, Liu X, Liu X. The Antibiotics Degradation and Its Mechanisms during the Livestock Manure Anaerobic Digestion. Molecules 2023; 28:molecules28104090. [PMID: 37241831 DOI: 10.3390/molecules28104090] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 05/04/2023] [Accepted: 05/09/2023] [Indexed: 05/28/2023] Open
Abstract
Antibiotics are administered to livestock at subtherapeutic levels to promote growth, and their degradation in manure is slow. High antibiotic concentrations can inhibit bacterial activity. Livestock excretes antibiotics via feces and urine, leading to their accumulation in manure. This can result in the propagation of antibiotic-resistant bacteria and antibiotic resistance genes (ARGs). Anaerobic digestion (AD) manure treatment technologies are gaining popularity due to their ability to mitigate organic matter pollution and pathogens, and produce methane-rich biogas as renewable energy. AD is influenced by multiple factors, including temperature, pH, total solids (TS), substrate type, organic loading rate (OLR), hydraulic retention time (HRT), intermediate substrates, and pre-treatments. Temperature plays a critical role, and thermophilic AD has been found to be more effective in reducing ARGs in manure compared to mesophilic AD, as evidenced by numerous studies. This review paper investigates the fundamental principles of process parameters affecting the degradation of ARGs in anaerobic digestion. The management of waste to mitigate antibiotic resistance in microorganisms presents a significant challenge, highlighting the need for effective waste management technologies. As the prevalence of antibiotic resistance continues to rise, urgent implementation of effective treatment strategies is necessary.
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Affiliation(s)
- Muhammad Zubair
- Institute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, No. 202 Industry North Road, Jinan 250100, China
- Beijing Key Lab for Source Control Technology of Water Pollution, Beijing Forestry University, Beijing 100083, China
| | - Zhaojun Li
- Institute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, No. 202 Industry North Road, Jinan 250100, China
| | - Rongsheng Zhu
- Institute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, No. 202 Industry North Road, Jinan 250100, China
| | - Jiancai Wang
- Institute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, No. 202 Industry North Road, Jinan 250100, China
| | - Xinghua Liu
- Institute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, No. 202 Industry North Road, Jinan 250100, China
| | - Xiayan Liu
- Institute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, No. 202 Industry North Road, Jinan 250100, China
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21
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Feng L, Aryal N, Li Y, Horn SJ, Ward AJ. Developing a biogas centralised circular bioeconomy using agricultural residues - Challenges and opportunities. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 868:161656. [PMID: 36669668 DOI: 10.1016/j.scitotenv.2023.161656] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Revised: 01/08/2023] [Accepted: 01/12/2023] [Indexed: 06/17/2023]
Abstract
Anaerobic digestion (AD) can be used as a stand-alone process or integrated as part of a larger biorefining process to produce biofuels, biochemicals and fertiliser, and has the potential to play a central role in the emerging circular bioeconomy (CBE). Agricultural residues, such as animal slurry, straw, and grass silage, represent an important resource and have a huge potential to boost biogas and methane yields. Under the CBE concept, there is a need to assess the long-term impact and investigate the potential accumulation of specific unwanted substances. Thus, a comprehensive literature review to summarise the benefits and environmental impacts of using agricultural residues for AD is needed. This review analyses the benefits and potential adverse effects related to developing biogas-centred CBE. The identified potential risks/challenges for developing biogas CBE include GHG emission, nutrient management, pollutants, etc. In general, the environmental risks are highly dependent on the input feedstocks and resulting digestate. Integrated treatment processes should be developed as these could both minimise risks and improve the economic perspective.
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Affiliation(s)
- Lu Feng
- NIBIO, Norwegian Institute of Bioeconomy Research, P.O. Box 115, 1431 Ås, Norway.
| | - Nabin Aryal
- Department of Microsystems, University of South-Eastern Norway, Borre, Norway
| | - Yeqing Li
- State Key Laboratory of Heavy Oil Processing, Beijing Key Laboratory of Biogas Upgrading Utilization, College of New Energy and Materials, China University of Petroleum Beijing (CUPB), Beijing 102249, PR China
| | - Svein Jarle Horn
- NIBIO, Norwegian Institute of Bioeconomy Research, P.O. Box 115, 1431 Ås, Norway; Faculty of Chemistry, Biotechnology, and Food Science, Norwegian University of Life Sciences (NMBU), P.O. Box 5003, 1432 Ås, Norway
| | - Alastair James Ward
- Department of Biological and Chemical Engineering, Aarhus University, Denmark
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22
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Xue X, Li X, Liu J, Zhu L, Zhou L, Jia J, Wang Z. Field-realistic dose of cefotaxime enhances potential mobility of β-lactam resistance genes in the gut microbiota of zebrafish (Danio rerio). AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2023; 257:106459. [PMID: 36857871 DOI: 10.1016/j.aquatox.2023.106459] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Revised: 12/17/2022] [Accepted: 02/21/2023] [Indexed: 06/18/2023]
Abstract
With large amounts of cephalosporin end up in natural ecosystems, water has been acknowledged as the large reservoir of β-lactam resistance over the past decades. However, there is still insufficient knowledge available on the function of the living organisms to the transmission of antibiotic resistance. For this reason, in this study, using adult zebrafish (Danio rerio) as animal model, exposing them to environmentally relevant dose of cefotaxime for 150 days, we asked whether cefotaxime contamination accelerated β-lactam resistance in gut microbiota as well as its potential transmission. Results showed that some of β-lactam resistance genes (βRGs) were intrinsic embedded in intestinal microbiome of zebrafish even without antibiotic stressor. Across cefotaxime treatment, the abundance of most βRGs in fish gut microbiome decreased apparently in the short term firstly, and then increased with the prolonged exposure, forming distinctly divergent βRG profiles with antibiotic-untreated zebrafish. Meanwhile, with the rising concentration of cefotaxime, the range of βRGs' host-taxa expanded and the co-occurrence relationships of mobile genetics elements (MGEs) with βRGs intensified, indicating the enhancement of βRGs' mobility in gut microbiome when the fish suffered from cefotaxime contamination. Furthermore, the path of partial least squares path modeling (PLS-PM) gave an integral assessment on the specific causality of cefotaxime treatment to βRG profiles, showing that cefotaxime-mediated βRGs variation was most ascribed to the alteration of MGEs under cefotaxime stress, followed by bacterial community, functioning both direct influence as βRG-hosts and indirect effects via affecting MGEs. Finally, pathogenic bacteria Aeromonas was identified as the critical host for multiple βRGs in fish guts, and its β-lactam resistance increased over the duration time of cefotaxime exposure, suggesting the potential spreading risks for the antibiotic-resistant pathogens from environmental ecosystems to clinic. Overall, our finding emphasized cefotaxime contamination in aquatic surroundings could enhance the β-lactam resistance and its transmission mobility in fish bodies.
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Affiliation(s)
- Xue Xue
- College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Xiangju Li
- College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Jialin Liu
- College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Long Zhu
- College of Marine Science and Fisheries, Jiangsu Ocean University, Lianyungang, Jiangsu 222005, China
| | - Linjun Zhou
- College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Jia Jia
- College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Zaizhao Wang
- College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
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23
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khalidi-idrissi A, Madinzi A, Anouzla A, Pala A, Mouhir L, Kadmi Y, Souabi S. Recent advances in the biological treatment of wastewater rich in emerging pollutants produced by pharmaceutical industrial discharges. INTERNATIONAL JOURNAL OF ENVIRONMENTAL SCIENCE AND TECHNOLOGY : IJEST 2023; 20:1-22. [PMID: 37360558 PMCID: PMC10019435 DOI: 10.1007/s13762-023-04867-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 12/19/2022] [Accepted: 02/22/2023] [Indexed: 06/28/2023]
Abstract
Pharmaceuticals and personal care products present potential risks to human health and the environment. In particular, wastewater treatment plants often detect emerging pollutants that disrupt biological treatment. The activated sludge process is a traditional biological method with a lower capital cost and limited operating requirements than more advanced treatment methods. In addition, the membrane bioreactor combines a membrane module and a bioreactor, widely used as an advanced method for treating pharmaceutical wastewater with good pollution performance. Indeed, the fouling of the membrane remains a major problem in this process. In addition, anaerobic membrane bioreactors can treat complex pharmaceutical waste while recovering energy and producing nutrient-rich wastewater for irrigation. Wastewater characterizations have shown that wastewater's high organic matter content facilitates the selection of low-cost, low-nutrient, low-surface-area, and effective anaerobic methods for drug degradation and reduces pollution. However, to improve the biological treatment, researchers have turned to hybrid processes in which all physical, chemical, and biological treatment methods are integrated to remove various emerging contaminants effectively. Hybrid systems can generate bioenergy, which helps reduce the operating costs of the pharmaceutical waste treatment system. To find the most effective treatment technique for our research, this work lists the different biological treatment techniques cited in the literature, such as activated sludge, membrane bioreactor, anaerobic treatment, and hybrid treatment, combining physicochemical and biological techniques.
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Affiliation(s)
- A. khalidi-idrissi
- Laboratory of Process Engineering and Environment, Faculty of Science and Technology, Mohammedia, University Hassan II of Casablanca, BP. 146, Mohammedia, Morocco
| | - A. Madinzi
- Laboratory of Process Engineering and Environment, Faculty of Science and Technology, Mohammedia, University Hassan II of Casablanca, BP. 146, Mohammedia, Morocco
| | - A. Anouzla
- Laboratory of Process Engineering and Environment, Faculty of Science and Technology, Mohammedia, University Hassan II of Casablanca, BP. 146, Mohammedia, Morocco
| | - A. Pala
- Environmental Research and Development Center (CEVMER), Dokuz Eylul University, Izmir, Turkey
| | - L. Mouhir
- Laboratory of Process Engineering and Environment, Faculty of Science and Technology, Mohammedia, University Hassan II of Casablanca, BP. 146, Mohammedia, Morocco
| | - Y. Kadmi
- CNRS, UMR 8516 - LASIR, University Lille, 59000 Lille, France
| | - S. Souabi
- Laboratory of Process Engineering and Environment, Faculty of Science and Technology, Mohammedia, University Hassan II of Casablanca, BP. 146, Mohammedia, Morocco
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24
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Paranhos AGDO, Pereira AR, Coelho LDN, Silva SDQ, de Aquino SF. Hydrothermal pre-treatment followed by anaerobic digestion for the removal of tylosin and antibiotic resistance agents from poultry litter. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:42443-42455. [PMID: 36648713 DOI: 10.1007/s11356-023-25329-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Accepted: 01/11/2023] [Indexed: 01/18/2023]
Abstract
Hydrothermal pretreatment (HPT) followed by anaerobic digestion (AD) is an alternative for harvesting energy and removing organic contaminants from sewage sludge and animal manure. This study investigated the use, in an energetically sustainable way, of HPT and AD, alone or combined, to produce methane and remove tylosin and antimicrobial resistance genes (ARG) from poultry litter (PL). The results showed that HPT at 80 °C (HPT80), followed by single-stage AD (AD-1S), led to the production of 517.9 ± 4.7 NL CH4 kg VS-1, resulting in 0.11 kWh kg PL-1 of electrical energy and 0.75 MJ kg PL-1 of thermal energy, thus supplying 33.6% of the energy spent on burning firewood at a typical farm. In this best-case scenario, the use of HPT alone reduced tylosin concentration from PL by 23.6%, while the process involving HPT followed by AD-1S led to the removal of 91.6% of such antibiotic. The combined process (HPT80 + AD-1S), in addition to contributing to reduce the absolute and relative abundances of ARG ermB (2.13 logs), intI1 (0.39 logs), sul1 (0.63 logs), and tetA (0.74 logs), led to a significant removal in the relative abundance of tylosin-resistant bacteria present in the poultry litter.
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Affiliation(s)
- Aline Gomes de Oliveira Paranhos
- Graduate Program in Environmental Engineering, School of Mines, Federal University of Ouro Preto, University Campus Morro Do Cruzeiro, S/N, Ouro Preto, MG, Brazil
| | - Andressa Rezende Pereira
- Graduate Program in Environmental Engineering, School of Mines, Federal University of Ouro Preto, University Campus Morro Do Cruzeiro, S/N, Ouro Preto, MG, Brazil
| | - Letícia Dias Nunes Coelho
- Department of Biological Sciences, Institute of Exact and Biological Sciences, Federal University of Ouro Preto, University Campus Morro Do Cruzeiro, S/N, Ouro Preto, MG, Brazil
| | - Silvana de Queiroz Silva
- Graduate Program in Environmental Engineering, School of Mines, Federal University of Ouro Preto, University Campus Morro Do Cruzeiro, S/N, Ouro Preto, MG, Brazil.,Department of Biological Sciences, Institute of Exact and Biological Sciences, Federal University of Ouro Preto, University Campus Morro Do Cruzeiro, S/N, Ouro Preto, MG, Brazil
| | - Sérgio Francisco de Aquino
- Graduate Program in Environmental Engineering, School of Mines, Federal University of Ouro Preto, University Campus Morro Do Cruzeiro, S/N, Ouro Preto, MG, Brazil. .,Department of Chemistry, Institute of Exact and Biological Sciences, Federal University of Ouro Preto, University Campus Morro Do Cruzeiro, S/N, Ouro Preto, MG, Brazil.
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25
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Sun W, Qian X, Wang X, Gu J. Residual enrofloxacin in cattle manure increased persistence and dissemination risk of antibiotic resistance genes during anaerobic digestion. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 326:116864. [PMID: 36436244 DOI: 10.1016/j.jenvman.2022.116864] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2022] [Revised: 11/02/2022] [Accepted: 11/22/2022] [Indexed: 06/16/2023]
Abstract
Anaerobic digestion is a common approach to dispose and recycle livestock manures, and the agricultural application of anaerobic digestives represents an important pathway of spreading antibiotic resistance genes (ARGs) from livestock manures to soils. Enrofloxacin is a clinically important fluoroquinolone antibiotic with high residual concentrations in livestock manure, and propagation of fluoroquinolone resistance genes poses a huge risk to public health. Compared with other antibiotics, enrofloxacin is relatively durable in anaerobic digestion system. However, its effect on the persistence of ARGs during anaerobic digestion and its mechanism are not clear. In this study, we investigated effects of 0, 4, and 8 mg/L enrofloxacin on the abundance, persistence, and transferring risk of five plasmid-mediated fluroquinolone ARGs and five typic clinically important non-fluoroquinolone ARGs during cattle manure digestion. The responses of integrons and microbial communities to enrofloxacin were assessed to uncover the underlying mechanisms. All the ten detected ARGs were highly persistent in anaerobic digestion, among them seven ARGs increased over 8.2 times after digestion. Network analysis revealed that the potential hosts of ARGs were critical functional taxa during anaerobic digestion, which can explain the high persistence of ARGs. Residual enrofloxacin significantly increased the abundance of aac(6')-ib-cr, sul1, intI1, and intI2 throughout the digestion, but had no impact on the other ARGs, demonstrating its role in facilitating horizontal gene transfer of the plasmid-mediated aac(6')-ib-cr. The influence of enrofloxacin on microbial communities disappeared at the end of digestion, but the ARG profiles remained distinctive between the enrofloxacin treatments and the control, suggesting the high persistence of enrofloxacin induced ARGs. Our results suggested the high persistence of ARGs in anaerobic digestion system, and highlighted the role of residual enrofloxacin in livestock manure in increasing dissemination risk of fluroquinolone resistance genes.
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Affiliation(s)
- Wei Sun
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China; Interdisciplinary Research Center for Soil Microbial Ecology and Land Sustainable Productivity in Dry Areas, Yangling, Northwest A&F University, Shaanxi 712100, China
| | - Xun Qian
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China; Interdisciplinary Research Center for Soil Microbial Ecology and Land Sustainable Productivity in Dry Areas, Yangling, Northwest A&F University, Shaanxi 712100, China
| | - Xiaojuan Wang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Jie Gu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China; Interdisciplinary Research Center for Soil Microbial Ecology and Land Sustainable Productivity in Dry Areas, Yangling, Northwest A&F University, Shaanxi 712100, China.
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26
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Barra Caracciolo A, Visca A, Rauseo J, Spataro F, Garbini GL, Grenni P, Mariani L, Mazzurco Miritana V, Massini G, Patrolecco L. Bioaccumulation of antibiotics and resistance genes in lettuce following cattle manure and digestate fertilization and their effects on soil and phyllosphere microbial communities. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 315:120413. [PMID: 36243186 DOI: 10.1016/j.envpol.2022.120413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Revised: 10/06/2022] [Accepted: 10/07/2022] [Indexed: 06/16/2023]
Abstract
The degradation and bioaccumulation of selected antibiotics such as the sulfonamide sulfamethoxazole (SMX) and the fluoroquinolones enrofloxacin (ENR) and ciprofloxacin (CIP) were investigated in soil microcosm experiments where Lactuca sativa was grown with manure or digestate (1%) and spiked with a mixture of the three antibiotics (7.5 mg/kg each). The soil, rhizosphere and leaf phyllosphere were sampled (at 0 and 46 days) from each microcosm to analyze the antibiotic concentrations, main resistance genes (sul1, sul2, qnrS, aac-(6')-Ib-crand qepA), the intI1and tnpA mobile genetic elements and the microbial community structure.Overall results showed that SMX and CIP decreased (70-85% and 55-79%, respectively), and ENR was quite persistent during the 46-day experiment. In plant presence, CIP and ENR were partially up-taken from soil to plant. In fact the bioaccumulation factors were > 1, with higher values in manure than digestate amended soils. The most abundant gene in soil was sul2 in digestate- and aac-(6')-Ib-cr in the manure-amended microcosms. In soil, neither sulfamethoxazole-resistance (sul1 and sul2), nor fluoroquinolone-resistance (aac-(6')-Ib-cr, qepA and qnrS) gene abundances were correlated with any antibiotic concentration. On the contrary, in lettuce leaves, the aac-(6')-Ib-cr gene was the most abundant, in accordance with the fluoroquinolone bioaccumulation. Finally, digestate stimulated a higher soil microbial biodiversity, introducing and promoting more bacterial genera associated with antibiotic degradation and involved in soil fertility and decreased fluoroquinolone bioaccumulation.
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Affiliation(s)
| | - Andrea Visca
- Water Research Institute - National Research Council (IRSA-CNR), Rome, Italy.
| | - Jasmin Rauseo
- Institute of Polar Sciences, National Research Council (ISP-CNR), Rome, Italy
| | - Francesca Spataro
- Institute of Polar Sciences, National Research Council (ISP-CNR), Rome, Italy
| | - Gian Luigi Garbini
- Water Research Institute - National Research Council (IRSA-CNR), Rome, Italy
| | - Paola Grenni
- Water Research Institute - National Research Council (IRSA-CNR), Rome, Italy
| | - Livia Mariani
- Water Research Institute - National Research Council (IRSA-CNR), Rome, Italy
| | - Valentina Mazzurco Miritana
- Water Research Institute - National Research Council (IRSA-CNR), Rome, Italy; Department of Energy Technologies, Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA), Rome, Italy
| | - Giulia Massini
- Water Research Institute - National Research Council (IRSA-CNR), Rome, Italy; Department of Energy Technologies, Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA), Rome, Italy
| | - Luisa Patrolecco
- Institute of Polar Sciences, National Research Council (ISP-CNR), Rome, Italy
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Czatzkowska M, Wolak I, Harnisz M, Korzeniewska E. Impact of Anthropogenic Activities on the Dissemination of ARGs in the Environment-A Review. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:ijerph191912853. [PMID: 36232152 PMCID: PMC9564893 DOI: 10.3390/ijerph191912853] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Revised: 09/28/2022] [Accepted: 10/03/2022] [Indexed: 05/07/2023]
Abstract
Over the past few decades, due to the excessive consumption of drugs in human and veterinary medicine, the antimicrobial resistance (AR) of microorganisms has risen considerably across the world, and this trend is predicted to intensify. Many worrying research results indicate the occurrence of pools of AR, both directly related to human activity and environmental factors. The increase of AR in the natural environment is mainly associated with the anthropogenic activity. The dissemination of AR is significantly stimulated by the operation of municipal facilities, such as wastewater treatment plants (WWTPs) or landfills, as well as biogas plants, agriculture and farming practices, including animal production and land application of manure. These activities entail a risk to public health by spreading bacteria resistant to antimicrobial products (ARB) and antibiotic resistance genes (ARGs). Furthermore, subinhibitory concentrations of antimicrobial substances additionally predispose microbial consortia and resistomes to changes in particular environments that are permeated by these micropollutants. The current state of knowledge on the fate of ARGs, their dissemination and the complexity of the AR phenomenon in relation to anthropogenic activity is inadequate. This review summarizes the state-of-the-art knowledge on AR in the environment, in particular focusing on AR spread in an anthropogenically altered environment and related environmental consequences.
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Ma W, Wang L, Xu X, Huo M, Zhou K, Mi K, Tian X, Cheng G, Huang L. Fate and exposure risk of florfenicol, thiamphenicol and antibiotic resistance genes during composting of swine manure. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 839:156243. [PMID: 35643147 DOI: 10.1016/j.scitotenv.2022.156243] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2022] [Revised: 05/19/2022] [Accepted: 05/22/2022] [Indexed: 06/15/2023]
Abstract
Livestock manure is an important source of antibiotic resistance genes (ARGs) spreading to the environment, posing a potential threat to human health. Here, we investigated the dissipation of florfenicol (FF) and thiamphenicol (TAP), and their effects on the bacterial community, mobile genetic elements (MGEs), and ARGs during composting. The results indicated that FF and TAP dissipated rapidly in compost, with half-life values of 5.1 and 1.6 d, respectively. However, FF could not be completely removed during composting. The FF and TAP residues in manure could reduce the elimination of ARGs and MGEs during composting, and had a negative effect on the physicochemical factors of the compost. Significant correlations were found between floR and intI1, indicating that floR in manure may more easily diffuse to the soil environment. Meanwhile, the presence of FF in manure could increase the abundance of floR. Network analysis showed that Proteobacteria and Firmicutes were the dominant bacterial communities and important potential pathogen hosts carrying ARGs. The predicted environmental concentration of FF in the soil was over 100 μg kg-1, which indicates that FF poses a potential risk to the natural environment, and we verified this result through field experiments. The results showed that FF dissipated in the soil after it migrated from manure to soil. In contrast, TAP in manure posed lower environmental risk. This study highlights that changed in composting conditions may control the rate of removal of ARGs. Further studies are needed to investigate the best environmental conditions to achieve a faster degradation of FF and a more comprehensive elimination of ARGs during composting.
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Affiliation(s)
- Wenjin Ma
- National Laboratory for Veterinary Drug Safety Evaluation, Huazhong Agriculture University, Wuhan 430070, China; MOA Laboratory for Risk Assessment of Quality and Safety of Livestock and Poultry Products, Hubei 430070, China; College of Veterinary Medicine, Huazhong Agriculture University, Wuhan 430070, China
| | - Lei Wang
- National Laboratory for Veterinary Drug Safety Evaluation, Huazhong Agriculture University, Wuhan 430070, China; MOA Laboratory for Risk Assessment of Quality and Safety of Livestock and Poultry Products, Hubei 430070, China; College of Veterinary Medicine, Huazhong Agriculture University, Wuhan 430070, China
| | - Xiangyue Xu
- National Laboratory for Veterinary Drug Safety Evaluation, Huazhong Agriculture University, Wuhan 430070, China; MOA Laboratory for Risk Assessment of Quality and Safety of Livestock and Poultry Products, Hubei 430070, China; College of Veterinary Medicine, Huazhong Agriculture University, Wuhan 430070, China
| | - Meixia Huo
- National Laboratory for Veterinary Drug Safety Evaluation, Huazhong Agriculture University, Wuhan 430070, China; MOA Laboratory for Risk Assessment of Quality and Safety of Livestock and Poultry Products, Hubei 430070, China; College of Veterinary Medicine, Huazhong Agriculture University, Wuhan 430070, China
| | - Kaixiang Zhou
- National Reference Laboratory of Veterinary Drug Residues (HZAU), Huazhong Agriculture University, Wuhan 430070, China; MOA Key Laboratory for Detection of Veterinary Drug Residues, Huazhong Agricultural University, Wuhan, Hubei 430070, China; College of Veterinary Medicine, Huazhong Agriculture University, Wuhan 430070, China
| | - Kun Mi
- National Reference Laboratory of Veterinary Drug Residues (HZAU), Huazhong Agriculture University, Wuhan 430070, China; MOA Key Laboratory for Detection of Veterinary Drug Residues, Huazhong Agricultural University, Wuhan, Hubei 430070, China; College of Veterinary Medicine, Huazhong Agriculture University, Wuhan 430070, China
| | - Xiaoyuan Tian
- National Laboratory for Veterinary Drug Safety Evaluation, Huazhong Agriculture University, Wuhan 430070, China; MOA Laboratory for Risk Assessment of Quality and Safety of Livestock and Poultry Products, Hubei 430070, China; College of Veterinary Medicine, Huazhong Agriculture University, Wuhan 430070, China
| | - Guyue Cheng
- National Laboratory for Veterinary Drug Safety Evaluation, Huazhong Agriculture University, Wuhan 430070, China; MOA Laboratory for Risk Assessment of Quality and Safety of Livestock and Poultry Products, Hubei 430070, China; National Reference Laboratory of Veterinary Drug Residues (HZAU), Huazhong Agriculture University, Wuhan 430070, China; College of Veterinary Medicine, Huazhong Agriculture University, Wuhan 430070, China
| | - Lingli Huang
- National Laboratory for Veterinary Drug Safety Evaluation, Huazhong Agriculture University, Wuhan 430070, China; MOA Laboratory for Risk Assessment of Quality and Safety of Livestock and Poultry Products, Hubei 430070, China; National Reference Laboratory of Veterinary Drug Residues (HZAU), Huazhong Agriculture University, Wuhan 430070, China; MOA Key Laboratory for Detection of Veterinary Drug Residues, Huazhong Agricultural University, Wuhan, Hubei 430070, China; College of Veterinary Medicine, Huazhong Agriculture University, Wuhan 430070, China.
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Haffiez N, Chung TH, Zakaria BS, Shahidi M, Mezbahuddin S, Maal-Bared R, Dhar BR. Exploration of machine learning algorithms for predicting the changes in abundance of antibiotic resistance genes in anaerobic digestion. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 839:156211. [PMID: 35623518 DOI: 10.1016/j.scitotenv.2022.156211] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2022] [Revised: 04/29/2022] [Accepted: 05/20/2022] [Indexed: 06/15/2023]
Abstract
The land application of digestate from anaerobic digestion (AD) is considered a significant route for transmitting antibiotic resistance genes (ARGs) and mobile genetic elements (MGEs) to ecosystems. To date, efforts towards understanding complex non-linear interactions between AD operating parameters with ARG/MGE abundances rely on experimental investigations due to a lack of mechanistic models. Herein, three different machine learning (ML) algorithms, Random Forest (RF), eXtreme Gradient Boosting (XGBoost), and Artificial Neural Network (ANN), were compared for their predictive capacities in simulating ARG/MGE abundance changes during AD. The models were trained and cross-validated using experimental data collected from 33 published literature. The comparison of model performance using coefficients of determination (R2) and root mean squared errors (RMSE) indicated that ANN was more reliable than RF and XGBoost. The mode of operation (batch/semi-continuous), co-digestion of food waste and sewage sludge, and residence time were identified as the three most critical features in predicting ARG/MGE abundance changes. Moreover, the trained ANN model could simulate non-linear interactions between operational parameters and ARG/MGE abundance changes that could be interpreted intuitively based on existing knowledge. Overall, this study demonstrates that machine learning can enable a reliable predictive model that can provide a holistic optimization tool for mitigating the ARG/MGE transmission potential of AD.
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Affiliation(s)
- Nervana Haffiez
- Civil and Environmental Engineering, University of Alberta, Edmonton, AB T6G 1H9, Canada
| | - Tae Hyun Chung
- Civil and Environmental Engineering, University of Alberta, Edmonton, AB T6G 1H9, Canada
| | - Basem S Zakaria
- Civil and Environmental Engineering, University of Alberta, Edmonton, AB T6G 1H9, Canada
| | | | | | | | - Bipro Ranjan Dhar
- Civil and Environmental Engineering, University of Alberta, Edmonton, AB T6G 1H9, Canada.
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Yusuf HH, Pan X, Cai G, Cai J, Huang X, Ye ZL. Semi-solid anaerobic co-digestion of source-separated fecal slag and food waste: focusing on methane production, ecological risk assessment, and quality evaluation as fertilizer. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:66578-66590. [PMID: 35504990 DOI: 10.1007/s11356-022-20249-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Accepted: 04/10/2022] [Indexed: 06/14/2023]
Abstract
Toilet revolution is driven by the urgent need for solutions to improve sanitation and access to high-quality organic fertilizer for rural areas, which is tagged "resource recovery from human waste." This study provides a possible solution via semi-solid anaerobic co-digestion (Aco-D) of source-separated fecal slag (SFS) and food waste (FW) (3:1). A comprehensive investigation of Aco-D at different inoculum/substrate ratios (ISR) was conducted. Results revealed that the reactor with ISR of 1:4 reached the highest methane yield (255.05 mL/gVS), which enhanced Methanosaetaceae, Methanomicrobiales, and Syntrophomonas. Additionally, the reactor with low feedstock (ISR of 1:2) showed higher removal efficiency of antibiotics (74.75%). The ecological risk of digestate decreased to an insignificant hazard quotient level, and the contents of nutrients and heavy metals were in line with the standard requirement for fertilizer. This study could serve as an alternative technology to support further research in SFS management and digestate utilization as fertilizer.
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Affiliation(s)
- Hamza Hassan Yusuf
- Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Xiaofang Pan
- Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Guanjing Cai
- Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
| | - Jiasheng Cai
- Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
| | - Xuewei Huang
- Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Zhi-Long Ye
- Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China.
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31
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Tian T, Dai S, Liu D, Wang Y, Qiao W, Yang M, Zhang Y. Occurrence and transfer characteristics of bla CTX-M genes among Escherichia coli in anaerobic digestion systems treating swine waste. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 834:155321. [PMID: 35452730 DOI: 10.1016/j.scitotenv.2022.155321] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2022] [Revised: 04/12/2022] [Accepted: 04/12/2022] [Indexed: 06/14/2023]
Abstract
Livestock waste is a known reservoir of Escherichia coli (E. coli) carrying clinically important CTX-M-type extended-spectrum β-lactamase genes (blaCTX-M), however, the occurrence and transfer characteristics of blaCTX-M genes during anaerobic digestion (AD) remain unclear. Herein, four full-scale and two parallel lab-scale AD systems treating swine waste under ambient and mesophilic conditions were investigated by both molecular- and culture-based methods to reveal the occurrence and transfer behaviors of blaCTX-M genes during AD. Real-time TaqMan polymerase chain reaction revealed 1.3 × 104-6.8 × 105 and 3.0 × 104-7.0 × 105 copies/mL of blaCTX-M groups 1 and 9 in all feeding substrates. While AD reduced the absolute abundance of groups 1 and 9 by 0.63-2.24 and 0.08-1.30 log (P < 0.05), 5.0 × 102-4.1 × 103 and 1.1 × 104-3.5 × 104 copies/mL of groups 1 and 9 remained in the anaerobic effluent, respectively. In total, 141 blaCTX-M-carrying E. coli isolates resistant to cefotaxime were obtained from the AD reactors. Whole-genome sequencing showed that blaCTX-M-65 mainly carried by E. coli ST155 was the most frequently detected group 9 subtype in the feeding substrate; whereas blaCTX-M-14 associated with the dominant clones E. coli ST6802 and ST155 became the major subtype in AD effluent. Furthermore, blaCTX-M-14 was flanked by ΔIS26 upstream and ΔIS903B downstream. The ΔIS26-blaCTX-M-14-ΔIS903B element was mainly located on the IncHI2 plasmid in E. coli ST48 and ST6802 and also the IncFIB plasmid in ST155 in anaerobic effluent. Conjugation assays showed that the plasmids harboring blaCTX-M-14 could be successfully transferred at a frequency of 10-3-10-2 cells per recipient cell. This study revealed that blaCTX-M genes remained in both the full-scale and lab-scale AD effluents of swine waste. Thus, additional efforts should be implemented to block the discharge and spread of antibiotic resistance genes to the environment.
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Affiliation(s)
- Tiantian Tian
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Shiting Dai
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Dejun Liu
- Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, College of Veterinary Medicine, China Agricultural University, Beijing 100193, China
| | - Yang Wang
- Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, College of Veterinary Medicine, China Agricultural University, Beijing 100193, China
| | - Wei Qiao
- College of Engineering, China Agricultural University, Beijing 100083, China
| | - Min Yang
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yu Zhang
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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32
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Usui M, Tamura Y, Asai T. Current status and future perspective of antimicrobial-resistant bacteria and resistance genes in animal-breeding environments. J Vet Med Sci 2022; 84:1292-1298. [PMID: 35871558 PMCID: PMC9523292 DOI: 10.1292/jvms.22-0253] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
The emergence and spread of antimicrobial-resistant bacteria (ARB) and antimicrobial resistance genes (ARGs) are a global public health concern. ARB are transmitted directly or indirectly
from animals to humans. The importance of environmental transmission of ARB and ARGs has recently been demonstrated, given the relationships between compost, livestock wastewater, insects,
and wildlife. In addition, companion animals and their surrounding environments (veterinary hospitals and homes with companion animals) should be considered owing to their close relationship
with humans. This review discusses the current status and future perspectives of ARB and ARGs in animal-breeding environments.
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Affiliation(s)
- Masaru Usui
- Laboratory of Food Microbiology and Food Safety, Department of Health and Environmental Sciences, School of Veterinary Medicine, Rakuno Gakuen University
| | - Yutaka Tamura
- Laboratory of Food Microbiology and Food Safety, Department of Health and Environmental Sciences, School of Veterinary Medicine, Rakuno Gakuen University
| | - Tetsuo Asai
- Department of Applied Veterinary Science, The United Graduate School of Veterinary Science, Gifu University
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33
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Sun H, Schnürer A, Müller B, Mößnang B, Lebuhn M, Makarewicz O. Uncovering antimicrobial resistance in three agricultural biogas plants using plant-based substrates. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 829:154556. [PMID: 35306061 DOI: 10.1016/j.scitotenv.2022.154556] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 03/09/2022] [Accepted: 03/09/2022] [Indexed: 06/14/2023]
Abstract
Antimicrobial resistance (AMR) is becoming an increasing global concern and the anaerobic digestion (AD) process represents a potential transmission route when digestates are used as fertilizing agents. AMR contaminants, e.g. antibiotic-resistant bacteria (ARB) and plasmid-mediated antibiotic resistance genes (ARGs) have been found in different substrates and AD systems, but not yet been investigated in plant-based substrates. AMR transfer from soils to vegetable microbiomes has been observed, and thus crop material potentially represents a so far neglected AMR load in agricultural AD processes, contributing to AMR spread. In order to test this hypothesis, this study examined the AMR situation throughout the process of three biogas plants using plant-based substrates only, or a mixture of plant-based and manure substrates. The evaluation included a combination of culture-independent and -dependent methods, i.e., identification of ARGs, plasmids, and pathogenic bacteria by DNA arrays, and phylogenetic classification of bacterial isolates and their phenotypic resistance pattern. To our knowledge, this is the first study on AMR in plant-based substrates and the corresponding biogas plant. The results showed that the bacterial community isolated from the investigated substrates and the AD processing facilities were mainly Gram-positive Bacillus spp. Apart from Pantoea agglomerans, no other Gram-negative species were found, either by bacteria culturing or by DNA typing array. In contrast, the presence of ARGs and plasmids clearly indicated the existence of Gram-negative pathogenic bacteria, in both substrate and AD process. Compared with substrates, digestates had lower levels of ARGs, plasmids, and culturable ARB. Thus, digestate could pose a lower risk of spreading AMR than substrates per se. In conclusion, plant-based substrates are associated with AMR, including culturable Gram-positive ARB and Gram-negative pathogenic bacteria-associated ARGs and plasmids. Thus, the AMR load from plant-based substrates should be taken into consideration in agricultural biogas processing.
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Affiliation(s)
- He Sun
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, BioCenter, Box 7025, SE-750 07 Uppsala, Sweden
| | - Anna Schnürer
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, BioCenter, Box 7025, SE-750 07 Uppsala, Sweden.
| | - Bettina Müller
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, BioCenter, Box 7025, SE-750 07 Uppsala, Sweden
| | - Bettina Mößnang
- Bavarian State Research Center for Agriculture, Central Department for Quality Assurance and Analytics, Lange Point 6, 85354 Freising, Germany
| | - Michael Lebuhn
- Bavarian State Research Center for Agriculture, Central Department for Quality Assurance and Analytics, Lange Point 6, 85354 Freising, Germany
| | - Oliwia Makarewicz
- Institute of Infectious Diseases and Infection Control, Jena University Hospital, Am Klinikum 1, 07747 Jena, Germany
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Wang G, Kong Y, Yang Y, Ma R, Li L, Li G, Yuan J. Composting temperature directly affects the removal of antibiotic resistance genes and mobile genetic elements in livestock manure. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 303:119174. [PMID: 35306090 DOI: 10.1016/j.envpol.2022.119174] [Citation(s) in RCA: 35] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 03/12/2022] [Accepted: 03/15/2022] [Indexed: 06/14/2023]
Abstract
The high antibiotic resistance gene (ARGs) contents in livestock manure pose a potential risk to environment and human health. The heap composting with an ambient temperature and thermophilic composting are two methods for converting livestock manure into fertilizer. This study investigated the variations in ARGs and mobile genetic elements (MGEs) and revealed potential mechanisms for ARGs removal using the two composting methods. The ARGs abundance were enriched by 44-fold in heap composting, among them, the macrolide-resistance genes increased significantly. On the contrary, the ARGs were removed by 92% in thermophilic composting, among them, tetracycline-resistance genes decreased by 97%. The bacterial hosts of ARGs were associated with the variations of ARGs and MGEs. The tetO was correlated with the most diverse bacteria in heap composting, and Bacteroidetes was the major host bacteria. While tetT was correlated with the most diverse bacteria in thermophilic composting, and Proteobacteria was the major host bacteria. Structural equation models showed that the enrichment of ARGs in heap composting was mainly correlated with bacterial communities, whereas, the removal of ARGs in thermophilic composting was directly affect by MGEs. Composting temperature directly affected the variations in ARGs. Higher and lower temperatures significantly decreased and increased, respectively, ARGs and MGEs abundance levels.
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Affiliation(s)
- Guoying Wang
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing, 100193, China
| | - Yilin Kong
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing, 100193, China
| | - Yan Yang
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing, 100193, China
| | - Ruonan Ma
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing, 100193, China
| | - Liqiong Li
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing, 100193, China
| | - Guoxue Li
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing, 100193, China
| | - Jing Yuan
- Beijing Key Laboratory of Farmland Soil Pollution Prevention and Remediation, College of Resources and Environmental Science, China Agricultural University, Beijing, 100193, China.
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Issaka E, Fapohunda FO, Amu-Darko JNO, Yeboah L, Yakubu S, Varjani S, Ali N, Bilal M. Biochar-based composites for remediation of polluted wastewater and soil environments: Challenges and prospects. CHEMOSPHERE 2022; 297:134163. [PMID: 35240157 DOI: 10.1016/j.chemosphere.2022.134163] [Citation(s) in RCA: 33] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2022] [Revised: 02/13/2022] [Accepted: 02/26/2022] [Indexed: 06/14/2023]
Abstract
Pharmaceuticals, heavy metals, pesticides, and dyes are the main environmental contaminants that have serious effects on both land and aquatic lives and necessitate the development of effective methods to mitigate these issues. Although some conventional methods are in use to tackle soil contamination, but biochar and biochar-based composites represent a reliable and sustainable means to deal with a spectrum of toxic organic and inorganic pollutants from contaminated environments. The capacity of biochars and derived constructs to remediate inorganic dyes, pesticides, insecticides, heavy metals, and pharmaceuticals from environmental matrices is attributed to their extensive surface area, surface functional groups, pore size distribution, and high sorption capability of these pollutants in water and soil environments. Application conditions, biochar feedstock, pyrolysis conditions and precursor materials are the factors that influence the capacity and functionality of biochar to adsorb pollutants from wastewater and soil. These factors, when improved, can benefit biochar in agrochemical and heavy metal remediation from various environments. However, the processes involved in biochar production and their influence in enhancing pollutant sequestration remain unclear. Therefore, this paper throws light on the current strategies, operational conditions, and sequestration performance of biochar and biochar-based composites for agrochemical and heavy metal in soil and water environments. The main challenges associated with biochar preparation and exploitation, toxicity evaluation, research directions and future prospects for biochar in environmental remediation are also outlined.
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Affiliation(s)
- Eliasu Issaka
- School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, 212013, PR China
| | | | | | - Linda Yeboah
- School of Biological Sciences, University of Ghana, Legon, 00233, Accra, Ghana
| | - Salome Yakubu
- School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, 212013, PR China
| | - Sunita Varjani
- Gujarat Pollution Control Board, Gandhinagar, 382 010, Gujarat, India
| | - Nisar Ali
- Key Laboratory for Palygorskite Science and Applied Technology of Jiangsu Province, National & Local Joint Engineering Research Center for Deep Utilization Technology of Rock-salt Resource, Faculty of Chemical Engineering, Huaiyin Institute of Technology, Huaian, 223003, China.
| | - Muhammad Bilal
- School of Life Science and Food Engineering, Huaiyin Institute of Technology, Huaian, 223003, China.
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36
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Haffiez N, Chung TH, Zakaria BS, Shahidi M, Mezbahuddin S, Hai FI, Dhar BR. A critical review of process parameters influencing the fate of antibiotic resistance genes in the anaerobic digestion of organic waste. BIORESOURCE TECHNOLOGY 2022; 354:127189. [PMID: 35439559 DOI: 10.1016/j.biortech.2022.127189] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Revised: 04/13/2022] [Accepted: 04/15/2022] [Indexed: 06/14/2023]
Abstract
The overuse and inappropriate disposal of antibiotics raised severe public health risks worldwide. Specifically, the incomplete antibiotics metabolism in human and animal bodies contributes to the significant release of antibiotics into the natural ecosystems and the proliferation of antibiotic-resistant bacteria carrying antibiotic-resistant genes. Moreover, the organic feedstocks used for anaerobic digestion are often highly-rich in residual antibiotics and antibiotic-resistant genes. Hence, understanding their fate during anaerobic digestion has become a significant research focus recently. Previous studies demonstrated that various process parameters could considerably influence the propagation of the antibiotic-resistant genes during anaerobic digestion and their transmission via land application of digestate. This review article scrutinizes the influences of process parameters on antibiotic-resistant genes propagation in anaerobic digestion and the inherent fundamentals behind their effects. Based on the literature review, critical research gaps and challenges are summarized to guide the prospects for future studies.
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Affiliation(s)
- Nervana Haffiez
- Civil and Environmental Engineering, University of Alberta, Edmonton, AB T6G 1H9, Canada
| | - Tae Hyun Chung
- Civil and Environmental Engineering, University of Alberta, Edmonton, AB T6G 1H9, Canada
| | - Basem S Zakaria
- Civil and Environmental Engineering, University of Alberta, Edmonton, AB T6G 1H9, Canada
| | - Manjila Shahidi
- 4S Analytics & Modelling Ltd., Edmonton, AB, T6W 3V6, Canada
| | | | - Faisal I Hai
- Strategic Water Infrastructure Laboratory, School of Civil, Mining and Environmental Engineering, University of Wollongong, Wollongong, NSW 2522, Australia
| | - Bipro Ranjan Dhar
- Civil and Environmental Engineering, University of Alberta, Edmonton, AB T6G 1H9, Canada.
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37
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Qin X, Zhai L, Khoshnevisan B, Pan J, Liu H. Restriction of biosolids returning to land: Fate of antibiotic resistance genes in soils after long-term biosolids application. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 301:119029. [PMID: 35217140 DOI: 10.1016/j.envpol.2022.119029] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 01/15/2022] [Accepted: 02/17/2022] [Indexed: 06/14/2023]
Abstract
Although the utilization of biosolids in agricultural lands is widely considered as an effective way to improve resource reuse, the presence of antibiotic resistance genes (ARGs) severely restricts biosolids returning to fields. A 12-year long-term experiment with different biosolids application rates (from 0 to 36 t ha-1 yr-1) was conducted to study the effect of biosolids application on shaping ARGs in soil. Biosolids application significantly increased ARGs abundance in the soil, except for MBS treatment (9 t ha-1 yr-1 biosolids application). The abundance of ARGs in soil did not increase linearly with the dose of biosolids applied, but they were significantly (P < 0.05) positively correlated. A total of 173 subtypes were detected, among them mobile genetic elements (MGEs), aminoglycoside, and multidrug resistance genes were the most dominant types. Except for MBS treatment, most of the ARGs detected were enriched in amended soils after long-term continuous biosolids application. Specifically, tetPA, sul1, mefA, and IS6100 were highly enriched in all amended soils. In addition, biosolids application increased soil nutrients and heavy metals, and changed the soil microbial community, all of which affected ARGs formation. But MGEs may be a greater factor for shaping ARGs profiles than soil properties. Overall, controlling the rate of biosolid application is the key to reducing the accumulation and horizontal transfer of ARGs in soils.
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Affiliation(s)
- Xuechao Qin
- Key Laboratory of Nonpoint Source Pollution Control, Ministry of Agriculture and Rural Affairs/Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, 100081, PR China
| | - Limei Zhai
- Key Laboratory of Nonpoint Source Pollution Control, Ministry of Agriculture and Rural Affairs/Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, 100081, PR China.
| | - Benyamin Khoshnevisan
- Department of Chemical Engineering, Biotechnology and Environmental Technology, University of Southern Denmark, Denmark
| | - Junting Pan
- Key Laboratory of Nonpoint Source Pollution Control, Ministry of Agriculture and Rural Affairs/Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, 100081, PR China
| | - Hongbin Liu
- Key Laboratory of Nonpoint Source Pollution Control, Ministry of Agriculture and Rural Affairs/Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, 100081, PR China
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Burch TR, Firnstahl AD, Spencer SK, Larson RA, Borchardt MA. Fate and seasonality of antimicrobial resistance genes during full-scale anaerobic digestion of cattle manure across seven livestock production facilities. JOURNAL OF ENVIRONMENTAL QUALITY 2022; 51:352-363. [PMID: 35388483 DOI: 10.1002/jeq2.20350] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Accepted: 03/22/2022] [Indexed: 06/14/2023]
Abstract
Anaerobic digestion has been suggested as an intervention to attenuate antibiotic resistance genes (ARGs) in livestock manure but supporting data have typically been collected at laboratory scale. Few studies have quantified ARG fate during full-scale digestion of livestock manure. We sampled untreated manure and digestate from seven full-scale mesophilic dairy manure digesters to assess ARG fate through each system. Samples were collected biweekly from December through August (i.e., winter, spring, and summer; n = 235 total) and analyzed by quantitative polymerase chain reaction for intI1, erm(B), sul1, tet(A), and tet(W). Concentrations of intI1, sul1, and tet(A) decreased during anaerobic digestion, but their removal was less extensive than expected based on previous laboratory studies. Removal for intI1 during anaerobic digestion equaled 0.28 ± 0.03 log10 units (mean ± SE), equivalent to only 48% removal and notable given intI1's role in horizontal gene transfer and multiple resistance. Furthermore, tet(W) concentrations were unchanged during anaerobic digestion (p > 0.05), and erm(B) concentrations increased by 0.52 ± 0.03 log10 units (3.3-fold), which is important given erythromycin's status as a critically important antibiotic for human medicine. Seasonal log10 changes in intI1, sul1, and tet(A) concentrations were ≥50% of corresponding log10 removals by anaerobic digestion, and variation in ARG and intI1 concentrations among digesters was quantitatively comparable to anaerobic digestion effects. These results suggest that mesophilic anaerobic digestion may be limited as an intervention for ARGs in livestock manure and emphasize the need for multiple farm-level interventions to attenuate antibiotic resistance.
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Affiliation(s)
- Tucker R Burch
- USDA-ARS, Environmentally Integrated Dairy Management Research Unit, 2615 Yellowstone Dr., Marshfield, WI, 54449, USA
- Laboratory for Infectious Disease and the Environment (an interagency laboratory supported by USDA-ARS and USGS), 2615 Yellowstone Dr., Marshfield, WI, 54449, USA
| | - Aaron D Firnstahl
- Laboratory for Infectious Disease and the Environment (an interagency laboratory supported by USDA-ARS and USGS), 2615 Yellowstone Dr., Marshfield, WI, 54449, USA
- USGS, Upper Midwest Water Science Center, 2615 Yellowstone Dr., Marshfield, WI, 54449, USA
| | - Susan K Spencer
- USDA-ARS, Environmentally Integrated Dairy Management Research Unit, 2615 Yellowstone Dr., Marshfield, WI, 54449, USA
- Laboratory for Infectious Disease and the Environment (an interagency laboratory supported by USDA-ARS and USGS), 2615 Yellowstone Dr., Marshfield, WI, 54449, USA
| | - Rebecca A Larson
- Dep. of Biological Systems Engineering, Univ. of Wisconsin-Madison, 232C Agricultural Engineering Building, 460 Henry Mall, Madison, WI, 53706, USA
| | - Mark A Borchardt
- USDA-ARS, Environmentally Integrated Dairy Management Research Unit, 2615 Yellowstone Dr., Marshfield, WI, 54449, USA
- Laboratory for Infectious Disease and the Environment (an interagency laboratory supported by USDA-ARS and USGS), 2615 Yellowstone Dr., Marshfield, WI, 54449, USA
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Haffiez N, Azizi SMM, Zakaria BS, Dhar BR. Propagation of antibiotic resistance genes during anaerobic digestion of thermally hydrolyzed sludge and their correlation with extracellular polymeric substances. Sci Rep 2022; 12:6749. [PMID: 35468927 PMCID: PMC9038762 DOI: 10.1038/s41598-022-10764-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2022] [Accepted: 04/12/2022] [Indexed: 12/27/2022] Open
Abstract
The positive impact of the thermal hydrolysis process (THP) of sewage sludge on antibiotic resistance genes (ARGs) removal during anaerobic digestion (AD) has been reported in the literature. However, little information is available on how changes in different extracellular polymeric substances (EPS) due to THP can influence ARG propagation during AD. This study focused on systematically correlating EPS components and ARG abundance in AD of sewage sludge pretreated with THP (80 °C, 110 °C, 140 °C, 170 °C). THP under different conditions improved sludge solubilization followed by improved methane yields in the biochemical methane potential (BMP) test. The highest methane yield of 275 ± 11.5 ml CH4/g COD was observed for THP-140 °C, which was 40.5 ± 2.5% higher than the control. Increasing THP operating temperatures showed a non-linear response of ARG propagation in AD due to the rebound effect. The highest ARGs removal in AD was achieved with THP at 140 °C. The multivariate analysis showed that EPS polysaccharides positively correlated with most ARGs and integrons, except for macrolides resistance genes. In contrast, EPS protein was only strongly correlated with β-lactam resistance genes. These results suggest that manipulating THP operating conditions targeting specific EPS components will be critical to effectively mitigating the dissemination of particular ARG types in AD.
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40
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Xie Z, Zou H, Zheng Y, Fu SF. Improving anaerobic digestion of corn straw by using solid-state urea pretreatment. CHEMOSPHERE 2022; 293:133559. [PMID: 35016961 DOI: 10.1016/j.chemosphere.2022.133559] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2021] [Revised: 11/24/2021] [Accepted: 01/06/2022] [Indexed: 06/14/2023]
Abstract
The resistant structure and high carbon/nitrogen ratio (C/N) of cellulosic substrate are the barriers during their anaerobic digestion (AD). Solid-state urea pretreatment was developed in this study to pretreat corn straw and adjust C/N ratio simultaneously for the downstream AD of corn straw. Results showed solid-state urea pretreatment was efficient in lignin removal and achieved the highest lignin reduction of 7.06% with C/N ratio = 15 during pretreatment. Scanning electron microscopy demonstrated the destruction of the dense structure by pretreatment, which benefited to the hydrolysis of corn straw. The cumulative methane yields of the pretreated corn straw ranged from 234.07 to 250.03 mL/g VS, which were obviously higher than that of the untreated corn straw. The maximum methane yield of 250.03 mL/g VS was achieved with C/N = 15 during pretreatment, which was 23.91% higher than that of the untreated group. In addition, AD digestates from the pretreated groups had 9.62% higher nutrients than that from the untreated group. The solid-state urea pretreatment can destroy the dense structure of corn straw and regulate the C/N ratio during AD, thus benefit the methane production and fertilizer use of the digestate, which is a potential choice during the AD of cellulosic substrate.
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Affiliation(s)
- Zhong Xie
- Jiangsu Key Laboratory of Anaerobic Biotechnology, School of Environment and Civil Engineering, Jiangnan University, NO.1800 Lihu Avenue, Wuxi, Jiangsu Province 214122, PR China
| | - Hua Zou
- Jiangsu Key Laboratory of Anaerobic Biotechnology, School of Environment and Civil Engineering, Jiangnan University, NO.1800 Lihu Avenue, Wuxi, Jiangsu Province 214122, PR China
| | - Yi Zheng
- Department of Grain Science and Industry, Kansas State University, 101C BIVAP, 1980 Kimball Avenue, Manhattan, KS, 66506, USA
| | - Shan-Fei Fu
- Jiangsu Key Laboratory of Anaerobic Biotechnology, School of Environment and Civil Engineering, Jiangnan University, NO.1800 Lihu Avenue, Wuxi, Jiangsu Province 214122, PR China; Shandong Industrial Engineering Laboratory of Biogas Production & Utilization, Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, NO. 189 Songling Road, Qingdao 266101, PR China.
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41
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Mushtaq M, Zeeshan M, Nawaz I, Hassan M. Effect of low levels of oxytetracycline on anaerobic digestion of cattle manure. BIORESOURCE TECHNOLOGY 2022; 349:126894. [PMID: 35217155 DOI: 10.1016/j.biortech.2022.126894] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Revised: 02/16/2022] [Accepted: 02/18/2022] [Indexed: 06/14/2023]
Abstract
Cattle manure is rich in organic matter and nutrients, but it may also contain harmful substances such as residual antibiotics and other toxic compounds. Oxytetracycline (OTC) is a widely used veterinary antibiotic and its presence in manure can affect the subsequent anaerobic digestion process. This study evaluated the effect of OTC concentrations viz. 0.12, 0.3, 0.6, 1.2, 3, 6 and 12 mg L-1 on batch mesophilic anaerobic digestion of cattle manure. The results showed that cumulative biogas yield decreased by 25, 29 and 55% at 3, 6 and 12 mg OTC L-1 in contrast to control. Volatile solids removal was 39% for control which reduced to 13% in 12 mg L-1 OTC spiked reactor. Effect on stability parameters was significant at OTC concentrations from 1.2 to 12 mg L-1. Two different kinetic models were used for biogas data validation and the modified Gompertz model best fitted to the experimental data.
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Affiliation(s)
- Moniba Mushtaq
- Institute of Environmental Sciences and Engineering (IESE), School of Civil and Environmental Engineering (SCEE), National University of Sciences and Technology (NUST), Islamabad 44000, Pakistan
| | - Muhammad Zeeshan
- Institute of Environmental Sciences and Engineering (IESE), School of Civil and Environmental Engineering (SCEE), National University of Sciences and Technology (NUST), Islamabad 44000, Pakistan
| | - Ismat Nawaz
- Department of Biosciences, COMSATS University Islamabad, Islamabad Campus, Islamabad, Pakistan
| | - Muneeb Hassan
- Institute of Environmental Sciences and Engineering (IESE), School of Civil and Environmental Engineering (SCEE), National University of Sciences and Technology (NUST), Islamabad 44000, Pakistan
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Sobhi M, Guo J, Gaballah MS, Li B, Zheng J, Cui X, Sun H, Dong R. Selecting the optimal nutrients recovery application for a biogas slurry based on its characteristics and the local environmental conditions: A critical review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 814:152700. [PMID: 34973327 DOI: 10.1016/j.scitotenv.2021.152700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 12/18/2021] [Accepted: 12/22/2021] [Indexed: 06/14/2023]
Abstract
Digestate (effluent of biogas plants) became the main bottleneck for biogas industry expansion because it often exceeds the capacity of surrounding croplands as fertilizer. Nutrients recovery from digestate is a promising solution for closing nutrients cycles and generating high value-added byproducts. In fact, numerous nutrients recovery technologies were reported and utilized for that purpose. However, each technology has optimum working conditions, while digestates have different characteristics due to the different substrates, digestion conditions, and handling methods. On the other hand, no protocol has been reported yet for selecting the optimal nutrients recovery technology or sequenced technologies for different digestates regarding their characteristics and the surrounding environmental conditions. In this study, an interactive flowchart was suggested and discussed for selecting the most appropriate technology or sequential techniques among the different alternatives. The whole digestate utilization technologies, solid-liquid separation technologies, liquid and solid processing technologies were included.
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Affiliation(s)
- Mostafa Sobhi
- College of Engineering, Key Laboratory for Clean Renewable Energy Utilization Technology, Ministry of Agriculture, China Agricultural University, Beijing 100083, PR China; Agricultural and Bio-systems Engineering Department, Faculty of Agriculture, Alexandria University, Alexandria, Egypt
| | - Jianbin Guo
- College of Engineering, Key Laboratory for Clean Renewable Energy Utilization Technology, Ministry of Agriculture, China Agricultural University, Beijing 100083, PR China.
| | - Mohamed S Gaballah
- College of Engineering, Key Laboratory for Clean Renewable Energy Utilization Technology, Ministry of Agriculture, China Agricultural University, Beijing 100083, PR China
| | - Bowen Li
- College of Engineering, Key Laboratory for Clean Renewable Energy Utilization Technology, Ministry of Agriculture, China Agricultural University, Beijing 100083, PR China
| | - Jiabao Zheng
- College of Engineering, Key Laboratory for Clean Renewable Energy Utilization Technology, Ministry of Agriculture, China Agricultural University, Beijing 100083, PR China
| | - Xian Cui
- College of Engineering, Key Laboratory for Clean Renewable Energy Utilization Technology, Ministry of Agriculture, China Agricultural University, Beijing 100083, PR China
| | - Hui Sun
- College of Engineering, Key Laboratory for Clean Renewable Energy Utilization Technology, Ministry of Agriculture, China Agricultural University, Beijing 100083, PR China
| | - Renjie Dong
- College of Engineering, Key Laboratory for Clean Renewable Energy Utilization Technology, Ministry of Agriculture, China Agricultural University, Beijing 100083, PR China; Yantai Institute, China Agricultural University, Yantai 264032, Shandong, PR China
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43
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Flores-Orozco D, Levin D, Kumar A, Sparling R, Cicek N. A meta-analysis reveals that operational parameters influence levels of antibiotic resistance genes during anaerobic digestion of animal manures. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 814:152711. [PMID: 34974005 DOI: 10.1016/j.scitotenv.2021.152711] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Revised: 12/22/2021] [Accepted: 12/23/2021] [Indexed: 06/14/2023]
Abstract
Anaerobic digestion (AD) has shown the potential to reduce the numbers and types of antibiotic-resistance genes (ARG) present in animal manures. However, the variability of the results has limited the ability to draw solid conclusions. To address this issue, we performed a series of meta-analyses to evaluate how AD of pig, cattle, and dairy manures affects ARG levels and how different parameters, such as temperature, pH, digestion times, and the addition of other substances (e.g., solids, antibiotics) influence ARG changes. Twenty studies with enough details on changes in ARG levels during the AD process were identified and used for the meta-analyses. The results suggested that AD could significantly reduce ARG levels regardless of the conditions of the process. Also, thermophilic AD was more effective than mesophilic AD at reducing ARGs, although this difference was only significant for pig manures. The results also suggested that long digestion times (>50 days) yielded better ARG reduction rates, and that the addition of solids from an external source (co-digestion) negatively affected the efficiency of ARG reduction. In general, the results suggested that ARG changes during AD could be linked to the abundance and activity of hydrolytic communities.
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Affiliation(s)
- Daniel Flores-Orozco
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, Manitoba R3T 5V6, Canada.
| | - David Levin
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, Manitoba R3T 5V6, Canada
| | - Ayush Kumar
- Department of Microbiology, University of Manitoba, Winnipeg, Manitoba R3T 2N2, Canada
| | - Richard Sparling
- Department of Microbiology, University of Manitoba, Winnipeg, Manitoba R3T 2N2, Canada
| | - Nazim Cicek
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, Manitoba R3T 5V6, Canada
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Lagoon, Anaerobic Digestion, and Composting of Animal Manure Treatments Impact on Tetracycline Resistance Genes. Antibiotics (Basel) 2022; 11:antibiotics11030391. [PMID: 35326854 PMCID: PMC8944653 DOI: 10.3390/antibiotics11030391] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Revised: 03/11/2022] [Accepted: 03/13/2022] [Indexed: 02/04/2023] Open
Abstract
Increased demand for animal protein is met by increased food animal production resulting in large quantities of manure. Animal producers, therefore, need sustainable agricultural practices to protect environmental health. Large quantities of antimicrobials are used in commercial food animal production. Consequently, antimicrobial-resistant bacteria and the resistance genes emerge and are excreted through feces. Manure management is essential for the safe disposal of animal waste. Lagoons, with or without covers, and anaerobic digesters, with the primary purpose of methane production, and composting, with the primary purpose of producing organic fertilizer, are widely used methods of manure treatment. We reviewed manure management practices and their impact on tetracycline resistance genes. Lagoons are maintained at ambient temperatures; especially uncovered lagoons are the least effective in removing tetracycline resistance genes. However, some modifications can improve the performance of lagoons: sequential use of uncovered lagoons and the use of covered lagoons resulted in a one-log reduction, while post-treatments such as biofiltration following covered lagoon treatment resulted in 3.4 log reduction. Mesophilic digestion of animal manure did not have any significant effect; only a 0.7 log reduction in tet(A) was observed in one study. While thermophilic anaerobic digesters are effective, if properly operated, they are expensive for animal producers. Aerobic thermophilic composting is a promising technology if optimized with its economic benefits. Composting of raw animal manure can result in up to a 2.5 log reduction, and postdigestion composting can reduce tetracycline resistance gene concentration by >80%. In general, manure management was not designed to mitigate antimicrobial resistance; future research is needed to optimize the economic benefits of biogas or organic fertilizer on the one hand and for the mitigation of foodborne pathogens and antimicrobial resistance on the other.
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45
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Metagenomic Analysis of the Long-Term Synergistic Effects of Antibiotics on the Anaerobic Digestion of Cattle Manure. ENERGIES 2022. [DOI: 10.3390/en15051920] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
The conversion of cattle manure into biogas in anaerobic digestion (AD) processes has been gaining attention in recent years. However, antibiotic consumption continues to increase worldwide, which is why antimicrobial concentrations can be expected to rise in cattle manure and in digestate. This study examined the long-term synergistic effects of antimicrobials on the anaerobic digestion of cattle manure. The prevalence of antibiotic resistance genes (ARGs) and changes in microbial biodiversity under exposure to the tested drugs was investigated using a metagenomic approach. Methane production was analyzed in lab-scale anaerobic bioreactors. Bacteroidetes, Firmicutes, and Actinobacteria were the most abundant bacteria in the samples. The domain Archaea was represented mainly by methanogenic genera Methanothrix and Methanosarcina and the order Methanomassiliicoccales. Exposure to antibiotics inhibited the growth and development of methanogenic microorganisms in the substrate. Antibiotics also influenced the abundance and prevalence of ARGs in samples. Seventeen types of ARGs were identified and classified. Genes encoding resistance to tetracyclines, macrolide–lincosamide–streptogramin antibiotics, and aminoglycosides, as well as multi-drug resistance genes, were most abundant. Antibiotics affected homoacetogenic bacteria and methanogens, and decreased the production of CH4. However, the antibiotic-induced decrease in CH4 production was minimized in the presence of highly drug-resistant microorganisms in AD bioreactors.
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Zhang J, Yue Z, Zhou Z, Ding C, Zhang T, Kamran M, Wan L, Wang X. Key microbial clusters and environmental factors affecting the removal of antibiotics in an engineered anaerobic digestion system. BIORESOURCE TECHNOLOGY 2022; 348:126770. [PMID: 35091038 DOI: 10.1016/j.biortech.2022.126770] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 01/20/2022] [Accepted: 01/21/2022] [Indexed: 06/14/2023]
Abstract
To identify the key microbial clusters and influencing factors involved in antibiotic removal from engineered anaerobic digestion (AD) systems, the dynamic characteristics of antibiotics, physiochemical factors, microbial communities and functional genes were investigated by 16S rRNA and metagenome sequencing. The results showed that antibiotic removal occurred mainly in the first 21 days, and sulfonamides had the highest removal rate. The key microbial clusters related to the biodegradation of antibiotics consisted mainly of Firmicutes and Bacteroidetes. The key enzymes consisted of deaminases, peptidases, C-N ligases, decarboxylases and alkyl-aryl transferases. Structural equation modelling indicated that low concentrations of propionic acid promoted the biodegradation activities of key microbial clusters in the first 21 days, but their activities were inhibited by the accumulated propionic acid after 21 days. Thus, propionic acid should be regulated in engineered AD systems to prevent the adverse effect of acid inhibition on antibiotic-degrading bacteria.
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Affiliation(s)
- Jing Zhang
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhengfu Yue
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhigao Zhou
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Changfeng Ding
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; Ecological Experimental Station of Red Soil, Chinese Academy of Sciences, Yingtan 335211, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Taolin Zhang
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Muhammad Kamran
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Liping Wan
- Jiangxi Zhenghe Ecological Agriculture Company Limited, Xinyu 338008, China
| | - Xingxiang Wang
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; Ecological Experimental Station of Red Soil, Chinese Academy of Sciences, Yingtan 335211, China; University of Chinese Academy of Sciences, Beijing 100049, China; Jiangxi Zhenghe Ecological Agriculture Company Limited, Xinyu 338008, China.
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Jadeja NB, Worrich A. From gut to mud: dissemination of antimicrobial resistance between animal and agricultural niches. Environ Microbiol 2022; 24:3290-3306. [PMID: 35172395 DOI: 10.1111/1462-2920.15927] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 01/24/2022] [Accepted: 01/27/2022] [Indexed: 12/11/2022]
Abstract
With increasing reports on antimicrobial resistance (AMR) in humans, animals and the environment, we are at risk of returning to a pre-antibiotic era. Therefore, AMR is recognized as one of the major global health threats of this century. Antibiotics are used extensively in farming systems to treat and prevent infections in food animals or to increase their growth. Besides the risk of a transfer of AMR between the human and the animal sector, there is another yet largely overlooked sector in the One Health triad. Human-dominated ecosystems such as agricultural soils are a major sink for antibiotics and AMR originating from livestock farming. This review summarizes current knowledge on the prevalence of AMR at the interface of animal and agricultural production and discusses the potential implications for human health. Soil resistomes are augmented by the application of manure from treated livestock. Subsequent transfer of AMR into plant microbiomes may likely play a critical role in human exposure to antibiotic resistance in the environment. Based on the knowledge that is currently available we advocate that more attention should be paid to the role of environmental resistomes in the AMR crisis.
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Affiliation(s)
- Niti B Jadeja
- Ashoka Trust for Research in Ecology and the Environment, PO, Royal Enclave, Srirampura, Jakkur, Bengaluru, Karnataka, 560064, India
| | - Anja Worrich
- Department of Environmental Microbiology, UFZ-Helmholtz Centre for Environmental Research, Permoserstr. 15, Leipzig, 04318, Germany
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48
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Bao Y, Pan C, Li D, Guo A, Dai F. Stress response to oxytetracycline and microplastic-polyethylene in wheat (Triticum aestivum L.) during seed germination and seedling growth stages. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 806:150553. [PMID: 34600215 DOI: 10.1016/j.scitotenv.2021.150553] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 09/07/2021] [Accepted: 09/20/2021] [Indexed: 06/13/2023]
Abstract
Much efforts have been devoted to clarify the phytotoxicity of individual contaminants in plants, such as individual antibiotic and microplastic; however, little is known about the phytotoxicity of their combined exposure. Here, we investigated the effects of individual and combined exposure of wheat (Triticum aestivum L.) (Xiaoyan 22) to oxytetracycline (OTC) and polyethylene (PE) microplastics using physiological and metabolic profilings. During the seed germination stage, OTC induced phytotoxicity, as observed through the changes of root elongation, sprout length, fresh weight and the vitality index, with significant effect at the 50 and 150 mg·L-1 levels; the effect of PE microplastics depended on the OTC level in the combined exposure groups. During seedling cultivation, catalase (CAT) and ascorbate peroxidase (APX), as antioxidant enzyme indices, were sensitive to OTC exposure stress, although OTC was not determined in leaves. Untargeted metabolomics of wheat leaves revealed OTC concentration-, metabolite class- and PE-dependent metabolic responses. Dominant metabolites included carboxylic acids, alcohols, and amines in the control group and all treatment groups. Compared to only OTC treatment, PE reprogrammed carboxylic acid and alcohol profiles in combined exposure groups with obvious separation in PLS-DA. Combined exposure induced fewer metabolites than OTC exposure alone at the 5 and 50 mg·L-1 levels. The shared metabolite numbers were higher in the OTC groups than in the PE-OTC groups. Pathway enrichment analysis showed a drift in metabolic pathways between individual and combined exposure to OTC and PE, which included glyoxylate and dicarboxylate metabolism, amino acid metabolism and isoquinoline alkaloid biosynthesis. Among metabolites, aromatic acids and amino acids were more sensitive to combined exposure than individual exposure. These results contribute to clarifying the underlying mechanisms of phytotoxicity of individual and combined exposure to OTC and PE.
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Affiliation(s)
- Yanyu Bao
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, PR China.
| | - Chengrong Pan
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, PR China
| | - Dezheng Li
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, PR China
| | - Aiyun Guo
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, PR China
| | - Fengbin Dai
- The Fine Varieties Breeding Center of Zoucheng, Jining 273518, Shandong Province, PR China
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49
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Du T, Feng L, Zhen X. Microbial community structures and antibiotic biodegradation characteristics during anaerobic digestion of chicken manure containing residual enrofloxacin. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART. B, PESTICIDES, FOOD CONTAMINANTS, AND AGRICULTURAL WASTES 2022; 57:102-113. [PMID: 35037829 DOI: 10.1080/03601234.2022.2026124] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
To explore the interaction between the residual antibiotic in animal manure and biological treatment, the effect of enrofloxacin (ENR) on the anaerobic digestion of chicken manure, and biodegradation rate of ENR was studied under the condition of actual residual ENR content of 0, 8, 16 and 32 mg/kg·TS. The results showed that the addition of ENR increased the total biogas production, especially 8 mg/kg·TS promoted the anaerobic reaction obviously, and the corresponding cumulative biogas production was increased by 15.33%. However, in the presence of 32 mg/kg·TS, the biogas production rate was reduced and the peak period of biogas production was delayed. The results of enzyme activities determination and 16S rRNA sequencing showed that ENR had different effects on archaea and bacteria. The residual ENR could promote hydrolysis reactions in the anaerobic system, but could inhibit acetoclastic methanogens, and the relative abundance of Methanosaeta declined by 7.22‒12.41%. The first-order kinetic model showed that the half-life period of ENR in the anaerobic digestion system was 9.16‒10.83 days, and the biodegradation rate exceeded 80% after the treatment. This study can bring important information for the management of animal manure in the future.
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Affiliation(s)
- Tie Du
- College of Energy and Environment, Shenyang Aerospace University, Shenyang, China
| | - Lei Feng
- College of Energy and Environment, Shenyang Aerospace University, Shenyang, China
| | - Xiaofei Zhen
- School of New Energy and Power Engineering, Lanzhou Jiaotong University, Lanzhou, China
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50
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Visca A, Rauseo J, Spataro F, Patrolecco L, Grenni P, Massini G, Mazzurco Miritana V, Barra Caracciolo A. Antibiotics and antibiotic resistance genes in anaerobic digesters and predicted concentrations in agroecosystems. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2022; 301:113891. [PMID: 34731939 DOI: 10.1016/j.jenvman.2021.113891] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Revised: 09/18/2021] [Accepted: 09/30/2021] [Indexed: 05/23/2023]
Abstract
In recent decades, the innovative practice of management and valorization of agrozootechnical waste as energy through anaerobic digestion (AD) has been rapidly growing. However, whether applying digestate to soil as biofertilizer can be a source of antibiotics (ABs) and antibiotic resistance genes (ARGs) has not been fully investigated so far. In this work the ARGs responsible for sulfamethoxazole (SMX) resistance (sul1, sul2), ciprofloxacin (CIP) resistance (qnrS, qepA, aac-(6')-Ib-cr) and the mobile genetic element intl1, together with the concentrations of the antibiotics SMX and CIP, were measured in several anaerobic digesters located in Central Italy. Based on these results, the concentrations of antibiotics and ARGs which can potentially reach soil through amendment with digestate were also estimated. The highest CIP and SMX concentrations were found during winter and spring in anaerobic digesters. The highest ARG abundances were found for the aac-(6')-Ib-cr and sul2 genes. The overall results showed that application of digestate to soil does not exclude AB contamination and spread of ARGs in agroecosystems, especially in the case of ciprofloxacin, owing to its high intrinsic persistence.
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Affiliation(s)
- Andrea Visca
- Water Research Institute - National Research Council (IRSA-CNR), Rome, Italy
| | - Jasmin Rauseo
- Institute of Polar Sciences - National Research Council (ISP-CNR), Rome, Italy.
| | - Francesca Spataro
- Institute of Polar Sciences - National Research Council (ISP-CNR), Rome, Italy
| | - Luisa Patrolecco
- Institute of Polar Sciences - National Research Council (ISP-CNR), Rome, Italy
| | - Paola Grenni
- Water Research Institute - National Research Council (IRSA-CNR), Rome, Italy
| | - Giulia Massini
- Department of Energy Technologies, Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA), Via Anguillarese 301, 00123, Rome, Italy
| | - Valentina Mazzurco Miritana
- Water Research Institute - National Research Council (IRSA-CNR), Rome, Italy; Department of Energy Technologies, Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA), Via Anguillarese 301, 00123, Rome, Italy
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