Unraveling global and diazotrophic bacteriomes of boreal forest floor feather mosses and their environmental drivers at the ecosystem and at the plant scale in North America

Light drives nitrogen fixation in tropical montane cloud forests in Costa Rica

Tropical montane cloud forests are high altitude ecosystems characterized by very high ambient humidity, which favors organisms that depend on the environment for their water status, such as bryophytes and their nitrogen-fixing symbionts. Bryophyte-associated N2 fixation is a major source of new N in several northern environments, but their contributions to the N cycle in other ecosystems is still poorly understood. In this work, we evaluated N2 fixation rates associated with epiphytic bryophytes growing along the stems of pumpwood trees (Cecropia sp.) as well as in surrounding litter and soil from a primary and a secondary cloud forests in the Talamanca Mountain Range, Costa Rica. Nitrogen fixation was significantly higher in substrates from the secondary forest compared to those from the primary forest. Overall, N2 fixation rates associated with epiphytic bryophytes were 57 times those of litter and 270 times what was measured in soil. Further, light intensity was the major factor influencing N2 fixation rates in all substrates. Increased access to light in disturbed cloud forests may therefore favor bryophyte-associated N2 fixation, potentially contributing to the recovery of these ecosystems.

A first look into moss living tardigrades in boreal peatlands

Tardigrades (Tardigrada) are a phylum of micrometazoans found in all biomes on Earth, but their ecology and habitat preferences remain vastly understudied. Boreal peatlands include a diversity of habitat types and high structural heterogeneity that represents an interesting system to study some of the poorly known habitat preferences of tardigrades. Here, we investigate for the first time tardigrade communities in peatland mosses and the latter's potential associations with key environmental variables. We collected 116 moss samples from 13 sites representing different peatland types and management histories. We found that tardigrades are common and diverse in boreal peatlands, as tardigrades were present in 72% of the collected samples and we identified 14 tardigrade genera. Tardigrade abundance seemed to increase alongside the increasing tree basal area and the density was higher in the microtopographic level further from the water table level, that is, hummocks (mean 117/moss gram) than in lawns/hollows (mean 84/moss gram). Furthermore, the highest tardigrade density was found in the moss taxa that are associated with forested peatland types (i.e., feather mosses) (321 mean/moss gram). Finally, we found interesting patterns regarding tardigrade functional diversity, as carnivorous tardigrades were found only in peatlands with tree basal area > 20 m2 and mostly in hummocks. Our study demonstrates that the habitat heterogeneity of peatlands (e.g., variation in moisture and vegetation cover) represents an interesting system to study tardigrade ecology and habitat preferences. However, since we found variation in tardigrade abundance and communities across peatland types and microhabitats within peatlands, our results highlight that such studies should be conducted with numerous replicate samples and a systematic study design that properly addresses the habitat heterogeneity between and within different peatland types.

Moss species and precipitation mediate experimental warming stimulation of growing season N2 fixation in subarctic tundra

Climate change in high latitude regions leads to both higher temperatures and more precipitation but their combined effects on terrestrial ecosystem processes are poorly understood. In nitrogen (N) limited and often moss-dominated tundra and boreal ecosystems, moss-associated N2 fixation is an important process that provides new N. We tested whether high mean annual precipitation enhanced experimental warming effects on growing season N2 fixation in three common arctic-boreal moss species adapted to different moisture conditions and evaluated their N contribution to the landscape level. We measured in situ N2 fixation rates in Hylocomium splendens, Pleurozium schreberi and Sphagnum spp. from June to September in subarctic tundra in Sweden. We exposed mosses occurring along a natural precipitation gradient (mean annual precipitation: 571-1155 mm) to 8 years of experimental summer warming using open-top chambers before our measurements. We modelled species-specific seasonal N input to the ecosystem at the colony and landscape level. Higher mean annual precipitation clearly increased N2 fixation, especially during peak growing season and in feather mosses. For Sphagnum-associated N2 fixation, high mean annual precipitation reversed a small negative warming response. By contrast, in the dry-adapted feather moss species higher mean annual precipitation led to negative warming effects. Modelled total growing season N inputs for Sphagnum spp. colonies were two to three times that of feather mosses at an area basis. However, at the landscape level where feather mosses were more abundant, they contributed 50% more N than Sphagnum. The discrepancy between modelled estimates of species-specific N input via N2 fixation at the moss core versus ecosystem scale, exemplify how moss cover is essential for evaluating impact of altered N2 fixation. Importantly, combined effects of warming and higher mean annual precipitation may not lead to similar responses across moss species, which could affect moss fitness and their abilities to buffer environmental changes.

The Feather Moss Hylocomium splendens Affects the Transcriptional Profile of a Symbiotic Cyanobacterium in Relation to Acquisition and Turnover of Key Nutrients

Moss-cyanobacteria symbioses were proposed to be based on nutrient exchange, with hosts providing C and S while bacteria provide N, but we still lack understanding of the underlying molecular mechanisms of their interactions. We investigated how contact between the ubiquitous moss Hylocomium splendens and its cyanobiont affects nutrient-related gene expression of both partners. We isolated a cyanobacterium from H. splendens and co-incubated it with washed H. splendens shoots. Cyanobacterium and moss were also incubated separately. After 1 week, we performed acetylene reduction assays to estimate N2 fixation and RNAseq to evaluate metatranscriptomes. Genes related to N2 fixation and the biosynthesis of several amino acids were up-regulated in the cyanobiont when hosted by the moss. However, S-uptake and the biosynthesis of the S-containing amino acids methionine and cysteine were down-regulated in the cyanobiont while the degradation of selenocysteine was up-regulated. In contrast, the number of differentially expressed genes in the moss was much lower, and almost no transcripts related to nutrient metabolism were affected. It is possible that, at least during the early stage of this symbiosis, the cyanobiont receives few if any nutrients from the host in return for N, suggesting that moss-cyanobacteria symbioses encompass relationships that are more plastic than a constant mutualist flow of nutrients.

Structure and Functions of Endophytic Bacterial Communities Associated with Sphagnum Mosses and Their Drivers in Two Different Nutrient Types of Peatlands

Sphagnum mosses are keystone plant species in the peatland ecosystems that play a crucial role in the formation of peat, which shelters a broad diversity of endophytic bacteria with important ecological functions. In particular, methanotrophic and nitrogen-fixing endophytic bacteria benefit Sphagnum moss hosts by providing both carbon and nitrogen. However, the composition and abundance of endophytic bacteria from different species of Sphagnum moss in peatlands of different nutrient statuses and their drivers remain unclear. This study used 16S rRNA gene amplicon sequencing to examine endophytic bacterial communities in Sphagnum mosses and measured the activity of methanotrophic microbial by the 13C-CH4 oxidation rate. According to the results, the endophytic bacterial community structure varied among Sphagnum moss species and Sphagnum capillifolium had the highest endophytic bacterial alpha diversity. Moreover, chlorophyll, phenol oxidase, carbon contents, and water retention capacity strongly shaped the communities of endophytic bacteria. Finally, Sphagnum palustre in Hani (SP) had a higher methane oxidation rate than S. palustre in Taishanmiao. This result is associated with the higher average relative abundance of Methyloferula an obligate methanotroph in SP. In summary, this work highlights the effects of Sphagnum moss characteristics on the endophytic bacteriome. The endophytic bacteriome is important for Sphagnum moss productivity, as well as for carbon and nitrogen cycles in Sphagnum moss peatlands.

Evaluating the effect of moss functional traits and sampling on elemental concentrations in Pleurozium schreberi and Ptilium crista-castrensis in Eastern Canada (Québec) black spruce forest

Characterizing atmospheric depositions allows evaluating the impact of air pollution on ecosystems, human health, and the economy. It also informs decision-makers about the implementation of regulations improving environmental quality. Biomonitoring uses organisms, such as mosses, as proxies to assess the presence of atmospheric contaminants (e.g., metals). This approach is cost-efficient and does not require complicated infrastructure or scientific skills, making it suitable for large-scale monitoring initiatives and citizen-based campaigns. Therefore, precise sampling protocols are needed to limit bias. Biomonitoring data remains scarce in North America, compared to e.g., Europe, and there is a need to develop large-scale and long-term biomonitoring initiatives to record current and future atmospheric depositions. As there is no standardized international sampling protocol, this study assessed the impact of parameters known to affect the elemental concentration of mosses, using samples collected along a 1000-km transect in Eastern Canada (Quebec) from 2016 to 2022. We specifically examined the effects of species, stem color, canopy opening, time of sampling, and stem length on 18 elements. Non-parametric statistical tests indicate that these factors have significant effects on some metals, but differences are generally low (<30 %), except for stem length. These results suggest that sampling protocols can be flexible in terms of species, canopy opening, time of sampling, and stem color. However, normalizing the length of the stems analyzed is required to account for differences in growth rates between sites. Moreover, since no large-scale biomonitoring campaign using mosses has been conducted in Eastern Canada, this paper also provides the first elemental baseline for moss in the region.

Biological nitrogen fixation, diversity and community structure of diazotrophs in two mosses in 25 temperate forests

Many moss species are associated with nitrogen (N)-fixing bacteria (diazotrophs) that support the N supply of mosses. Our knowledge relates primarily to pristine ecosystems with low atmospheric N input, but knowledge of biological N fixation (BNF) and diazotrophic communities in mosses in temperate forests with high N deposition is limited. We measured BNF rates using the direct stable isotope method and studied the total and potentially active diazotrophic communities in two abundant mosses, Brachythecium rutabulum and Hypnum cupressiforme, both growing on lying deadwood trunks in 25 temperate forest sites. BNF rates in both mosses were similar to those observed in moss species of pristine ecosystems. H. cupressiforme fixed three times more N2 and exhibited lower diazotrophic richness than B. rutabulum. Frankia was the most prominent diazotroph followed by cyanobacteria Nostoc. Manganese, iron, and molybdenum contents in mosses were positively correlated with BNF and diazotrophic communities. Frankia maintained high BNF rates in H. cupressiforme and B. rutabulum even under high chronic N deposition in Central European forests. Moss N concentration and 15 N abundance indicate a rather minor contribution of BNF to the N nutrition of these mosses.

Revealing the transfer pathways of cyanobacterial-fixed N into the boreal forest through the feather-moss microbiome

INTRODUCTION

Biological N₂ fixation in feather-mosses is one of the largest inputs of new nitrogen (N) to boreal forest ecosystems; however, revealing the fate of newly fixed N within the bryosphere (i.e. bryophytes and their associated organisms) remains uncertain.

METHODS

Herein, we combined ¹⁵N tracers, high resolution secondary ion mass-spectrometry (NanoSIMS) and a molecular survey of bacterial, fungal and diazotrophic communities, to determine the origin and transfer pathways of newly fixed N₂ within feather-moss (Pleurozium schreberi) and its associated microbiome.

RESULTS

NanoSIMS images reveal that newly fixed N₂, derived from cyanobacteria, is incorporated into moss tissues and associated bacteria, fungi and micro-algae.

DISCUSSION

These images demonstrate that previous assumptions that newly fixed N₂ is sequestered into moss tissue and only released by decomposition are not correct. We provide the first empirical evidence of new pathways for N₂ fixed in feather-mosses to enter the boreal forest ecosystem (i.e. through its microbiome) and discuss the implications for wider ecosystem function.