Using stable isotope fractionation factors to identify Cr(VI) reduction pathways: Metal-mineral-microbe interactions

Combined impact of antibiotics and Cr(VI) on antibiotic resistance, ARGs, and growth of Bacillussp. SH-1: A functionl analysis from gene to protease

The simultaneous selection of antibiotic resistance genes (ARGs) induced by heavy metals and antibiotics has emerged as a growing environmental problem. This study investigated the combined effects of chromium (Cr(VI)) and antibiotics on the ARGs of Bacillus cereus SH-1. As Cr(VI) concentration increased, it triggered reactive oxygen species oxidative stress in SH-1, increased antioxidant enzyme activity, enhanced plasmid conjugative transfer, and reduced the efficiency of Cr(VI) removal by SH-1. Antibiotic resistance varied with increasing tetracycline and amoxicillin minimum inhibitory concentrations (MICs), whereas azithromycin and chloramphenicol MICs decreased with Cr(VI) induction. The overexpression of eight genes of the HAE-1 family of efflux pumps was detected using metagenomics and proteomics. Co-contamination with Cr(VI) and antibiotics has led to the emergence and spread of antibiotic-resistant bacteria. Therefore, resistance gene contamination resulting from Cr(VI)-polluted environments cannot be overlooked.

Unveiling the biointerfaces characteristics and removal pathways of Cr(Ⅵ) in Bacillus cereus FNXJ1-2-3 for the Cr(Ⅵ)-to-Cr(0) conversion

Although less toxic than hexavalent chromium, Cr (Ⅲ) species still pose a threat to human health. The Cr (Ⅵ) should be converted to Cr (0) instead of Cr (Ⅲ), which is still involved in biological detoxification filed. Herein, for the first time, it was found that Cr(Ⅵ) can be reduced into Cr(0) by Bacillus cereus FNXJ1-2-3, a way to completely harmless treatment of Cr(Ⅵ). The bacterial strain exhibited excellent performance in the reduction, sorption, and accumulation of Cr(Ⅵ) and Cr (Ⅲ). XPS etching characterization inferred that the transformation of Cr(Ⅵ) into Cr(0) followed a reduction pathway of Cr(Ⅵ)→Cr (Ⅲ)→metallic Cr(0), in which at least two secretory chromium reductases (ECrⅥ→Ⅲ and ECrⅢ→0) worked. Under the optimum condition, the yield ratio of Cr(0)/Cr (Ⅲ) reached 33.90%. In addition, the interfacial interactions, ion channels, chromium reductases, and external electron donors also contributed to the Cr(Ⅵ)/Cr(0) transformation. Findings of this study indicate that Bacillus cereus FNXJ1-2-3 is a promising bioremediation agent for Cr(Ⅵ) pollution control.

Chromiomics: Chromium detoxification and approaches for engineering tolerance in plants

Chromium (Cr) is a heavy metal that poses a grave threat to the ecosystem including plants. Chromium is very harmful to plants due to its effects on many physiological and metabolic pathways culminating in a negative impact on plant's growth, development, and ability to take up nutrients. Plants have developed physiological, biochemical, and molecular ways of defense against Cr, such as by augmenting antioxidant potential to reduce reactive oxygen species (ROS). A number of genes have been discovered to play a significant role in the defense mechanisms of plants against Cr, for example, genes associated with the activation of phytochelatins, metallothioneins, and those of enzymes like glutathione-S-transferases. Along with this, a few miRNAs have been found to be associated in alleviating Cr stress and, to augment plant tolerance by controlling transcription factors, HSPs, and the expression of a few proteins and hormones. Defense pathway genes and miRNAs have been used for the generation of transgenic phytoremediator plants. Not only do the transgenic plants have a higher tolerance to Cr, but they also act as hyperaccumulators for Cr and have the potential to remediate other heavy metals. This article describes about environmental Cr contamination, Cr effects on plants, different genes and miRNAs involved in Cr stress mitigation and use of candidate genes, microRNAs for creating transgenic plant systems for phytoremediation, and the applications of CRISPR technology. It is expected that the integration of omics approach and advanced genomics will offer scope for more effective phytoremediation of Chromium in the coming years.

Stimulating and toxic effect of chromium on growth and photosynthesis of a marine chlorophyte

Marine phytoplankton can interchange trace metals in various biochemical functions, particularly under metal-limiting conditions. Here, we investigate the stimulating and toxicity effect of chromium (Cr) on a marine Chlorophyceae Osetreococcus tauri under Fe-replete and Fe-deficient conditions. We determined the growth, photosynthesis, and proteome expressions of Osetreococcus tauri cultured under different Cr and Fe concentrations. In Fe-replete conditions, the presence of Cr(VI) stimulated significantly the growth rate and the maximum yield of photochemistry of photosystem II (Fv /Fm ) of the phytoplankton, while the functional absorption cross-section of photosystem II (σPSII ) did not change. Minor additions of Cr(VI) partially rescued phytoplankton growth under Fe-limited conditions. Proteomic analysis of this alga grown in Fe-replete normal and Fe-replete with Cr addition media (10 μM Cr) showed that the presence of Cr significantly decreased the expression of phosphate-transporting proteins and photosynthetic proteins, while increasing the expression of proteins related to carbon assimilation. Cr can stimulate the growth and photosynthesis of O. tauri, but the effects are dependent on both the Cr(VI) concentration and the availability of Fe. The proteomic results further suggest that Cr(VI) addition might significantly increase starch production and carbon fixation.

Efficient utilization of photoelectron-hole at semiconductor-microbe interface for pyridine degradation with assistance of external electric field

In this study, enhanced pyridine bio-photodegradation with assistance of electricity was achieved. Meanwhile, photoelectron-hole played a vital role in accelerating pyridine biomineralization. The significant separation of photoelectron-hole was achieved with an external electric field, which provided sufficient electron donors and acceptors for pyridine biodegradation. The enhanced electron transport system activity also revealed the full utilization of photoelectron-hole by microbes at semiconductor-microbe interface with assistance of electricity. Microbial community analysis confirmed the enrichment of functional species related to pyridine biodegradation and electron transfer. Microbial function analysis and microbial co-occurrence networks analysis indicated that upregulated functional genes and positive interactions of different species were the important reasons for enhanced pyridine bio-photodegradation with external electric field. A possible mechanism of enhanced pyridine biodegradation was proposed, i.e., more photoelectrons and holes of semiconductors were utilized by microbes to accelerate reduction and oxidation of pyridine with the assistance of electrical stimulation. The excellent performance of the photoelectrical biodegradation system showed a potential alternative for recalcitrant organic wastewater treatment.

A comprehensive review on chromium (Cr) contamination and Cr(VI)-resistant extremophiles in diverse extreme environments

Chromium (Cr) compounds are usually toxins and exist abundantly in two different forms, Cr(VI) and Cr(III), in nature. Their contamination in any environment is a major problem. Many extreme environments including cold climate, warm climate, acidic environment, basic/alkaline environment, hypersaline environment, radiation, drought, high pressure, and anaerobic conditions have accumulated elevated Cr contamination. These harsh physicochemical conditions associated with Cr(VI) contamination damage biological systems in various ways. However, several unique microorganisms belonging to phylogenetically distant taxa (bacteria, fungi, and microalgae) owing to different and very distinct physiological characteristics can withstand extremities of Cr(VI) in different physicochemical environments. These challenging situations offer great potential and extended proficiencies in extremophiles for environmental and biotechnological applications. On these issues, the present review draws attention to Cr(VI) contamination from diverse extreme environmental regions. The study gives a detailed account on the ecology and biogeography of Cr(VI)-resistant microorganisms in inhospitable environments, and their use for detoxifying Cr(VI) and other applications. The study also focuses on physiological, multi-omics, and genetic engineering approaches of Cr(VI)-resistant extremophiles.

Thallium adsorption on three iron (hydr)oxides and Tl isotopic fractionation induced by adsorption on ferrihydrite

Thallium (Tl) is an extraordinarily toxic metal, which is usually present with Tl(I) and highly mobile in aquatic environment. Limited knowledge is available on the adsorption and isotopic variations of Tl(I) to Fe-(hydr)oxides. Herein, the adsorption behavior and mechanism of Tl(I) on representative Fe-(hydr)oxides, i.e. goethite, hematite, and ferrihydrite, were comparatively investigated kineticly and isothermally, additional to crystal structure modelling and Tl isotope composition (²⁰⁵Tl/²⁰³Tl). The results showed that ferrihydrite exhibited overall higher Tl(I) adsorption capacity (1.11-10.86 mg/kg) than goethite (0.21-1.83 mg/kg) and hematite (0.14-2.35 mg/kg), and adsorption by the three prevalent Fe-minerals presented strong pH and ionic strength dependence. The magnitude of Tl isotopic fractionation during Tl(I) adsorption to ferrihydrite (α_{solid-solution} ≈ 1.00022-1.00037) was smaller than previously observed fractionation between Mn oxides and aqueous Tl(I) (α_{solid-solution} ≈ 1.0002-1.0015). The notable difference is likely that whether oxidation of Tl(I) occurred during Tl adsorption to the mineral surfaces. This study found a small but detectable Tl isotopic fractionation during Tl(I) adsorption to ferrihydrite and heavier Tl isotope was slightly preferentially adsorbed on surface of ferrihydrite, which was attributed to the formation of inner-sphere complex between Tl and ≡Fe-OH. The findings offer a new understanding of the migration and fate of ²⁰⁵Tl/²⁰³Tl during Tl(I) adsorption to Fe (hydr)oxides.

The Difference between Rhizosphere and Endophytic Bacteria on the Safe Cultivation of Lettuce in Cr-Contaminated Farmland

Chromium (Cr) is a major pollutant affecting the environment and human health and microbial remediation is considered to be the most promising technology for the restoration of the heavily metal-polluted soil. However, the difference between rhizosphere and endophytic bacteria on the potential of crop safety production in Cr-contaminated farmland is not clearly elucidated. Therefore, eight Cr-tolerant endophytic strains of three species: Serratia (SR-1~2), Lysinebacillus (LB-1~5) and Pseudomonas (PA-1) were isolated from rice and maize. Additionally, one Cr-tolerant strain of Alcaligenes faecalis (AF-1) was isolated from the rhizosphere of maize. A randomized group pot experiment with heavily Cr-contaminated (a total Cr concentration of 1020.18 mg kg^-1) paddy clay soil was conducted and the effects of different bacteria on plant growth, absorption and accumulation of Cr in lettuce (Lactuca sativa var. Hort) were compared. The results show that: (i) the addition of SR-2, PA-1 and LB-5 could promote the accumulation of plant fresh weight by 10.3%, 13.5% and 14.2%, respectively; (ii) most of the bacteria could significantly increase the activities of rhizosphere soil catalase and sucrase, among which LB-1 promotes catalase activity by 224.60% and PA-1 increases sucrase activity by 247%; (iii) AF-1, SR-1, LB-1, SR-2, LB-2, LB-3, LB-4 and LB-5 strains could significantly decrease shoot the Cr concentration by 19.2-83.6%. The results reveal that Cr-tolerant bacteria have good potential to reduce shoot Cr concentration at the heavily contaminated soil and endophytic bacteria have the same or even better effects than rhizosphere bacteria; this suggests that bacteria in plants are more ecological friendly than bacteria in soil, thus aiming to safely produce crops in Cr-polluted farmland and alleviate Cr contamination from the food chain.

Chromium (VI) bioremoval from contaminated wastewater using Pseudomonas aeruginosa ATHA23 producing biofilm supported on clinoptilolite

More has yet to be investigated on the increased efficiency of microbes for the removal of heavy metals from industrial wastewaters. The objective was to determine the Cr (VI) bioabsorption and bioreduction ability of biofilm-producing bacteria supported on clinoptilolite from contaminated aqueous solutions. Chromium (VI)-tolerant bacteria, namely Pseudomonas aeruginosa ATHA23, were identified by biochemical methods and 16S rDNA sequencing and were deposited in NCBI (accession number: KF680991). Preparation of clinoptilolite, bacterial growth and isolation, biofilm production including extracellular polysaccharides (EPS) and Cr (VI) removal efficiency, affected by the experimental treatments, were investigated. The use of FTIR characterized clinoptilolite properties with and without biofilm in the presence and absence of Cr (IV). Higher Cr (VI) levels in the bacterial growth medium, increased EPS production with the highest value (0.171 mg L^-1), produced 18 h after treating the bacteria with Cr (VI) (100 mg L^-1). However, in the absence of Cr (VI), EPS significantly decreased to 0.117 mg L^-1. Plackett-Burman and Taguchi statistical analyses were used to optimize the experimental treatments affecting the removal efficiency of Cr (VI). Among the anions (nitrate, sulfate, and chloride), sulfate decreased Cr removal efficiency. The absorption data were best fitted to the pseudo-second order, and the data of Cr adsorption by clinoptilolite-biofilm were also better fitted to Freundlich isotherm model. The Cr (VI) bioremediation potential of P. aeruginosa ATHA23 by the production of biofilm supported on clinoptilolite has been shown for the first time, which is of significance for the environment and the industry.

Accelerating denitrification and mitigating nitrite accumulation by multiple electron transfer pathways between Shewanella oneidensis MR-1 and denitrifying microbial community

The bio-denitrification was usually retarded by the unbalance of electron generation and consumption. In this study, mixing S. oneidensis MR-1 with denitrifying microbial community increased the nitrogen removal rate by 74.74 % via the interspecies electron transfer (IET), and reduced the accumulated nitrite from 9.90 ± 0.81 to 0.02 ± 0.03 mg/L. Enhanced denitrification still appeared but relatively decreased, when S. oneidensis MR-1 was separated by a dialysis bag (MW < 3000), indicating mediated interspecies electron transfer (MIET) counted in IET. The results of electron transfer activity and sludge conductivity suggested DIET and MIET jointly transfer electrons from MR-1 to electroactive denitrifying bacteria (EDB), improving denitrifying reductase activities. Electron distribution among denitrifying reductases was found to be associated with the IET rate. Microbial insights showed the total abundance of EDB was increased, and denitrifying genes were correspondingly enriched. Pseudomonas was found to cooperate with exoelectrogens in a complicated microbial community.

Sensitivity of Zea mays and Soil Microorganisms to the Toxic Effect of Chromium (VI)

Chromium is used in many settings, and hence, it can easily enter the natural environment. It exists in several oxidation states. In soil, depending on its oxidation-reduction potential, it can occur in bivalent, trivalent or hexavalent forms. Hexavalent chromium compounds are cancerogenic to humans. The aim of this study was to determine the effect of Cr(VI) on the structure of bacteria and fungi in soil, to find out how this effect is modified by humic acids and to determine the response of Zea mays to this form of chromium. A pot experiment was conducted to answer the above questions. Zea mays was sown in natural soil and soil polluted with Cr(VI) in an amount of 60 mg kg-1 d.m. Both soils were treated with humic acids in the form of HumiAgra preparation. The ecophysiological and genetic diversity of bacteria and fungi was assayed in soil under maize (not sown with Zea mays). In addition, the following were determined: yield of maize, greenness index, index of tolerance to chromium, translocation index and accumulation of chromium in the plant. It has been determined that Cr(VI) significantly distorts the growth and development of Zea mays, while humic acids completely neutralize its toxic effect on the plant. This element had an adverse effect on the development of bacteria of the genera Cellulosimicrobium, Kaistobacter, Rhodanobacter, Rhodoplanes and Nocardioides and fungi of the genera Chaetomium and Humicola. Soil contamination with Cr(VI) significantly diminished the genetic diversity and richness of bacteria and the ecophysiological diversity of fungi. The negative impact of Cr(VI) on the diversity of bacteria and fungi was mollified by Zea mays and the application of humic acids.

Versatile mechanisms and enhanced strategies of pollutants removal mediated by Shewanella oneidensis: A review

The removal of environmental pollutants is important for a sustainable ecosystem and human health. Shewanella oneidensis (S. oneidensis) has diverse electron transfer pathways and can use a variety of contaminants as electron acceptors or electron donors. This paper reviews S. oneidensis's function in removing environmental pollutants, including heavy metals, inorganic non-metallic ions (INMIs), and toxic organic pollutants. S. oneidensis can mineralize o-xylene (OX), phenanthrene (PHE), and pyridine (Py) as electron donors, and also reduce azo dyes, nitro aromatic compounds (NACs), heavy metals, and iodate by extracellular electron transfer (EET). For azo dyes, NACs, Cr(VI), nitrite, nitrate, thiosulfate, and sulfite that can cross the membrane, S. oneidensis transfers electrons to intracellular reductases to catalyze their reduction. However, most organic pollutants cannot be directly degraded by S. oneidensis, but S. oneidensis can remove these pollutants by self-synthesizing catalysts or photocatalysts, constructing bio-photocatalytic systems, driving Fenton reactions, forming microbial consortia, and genetic engineering. However, the industrial-scale application of S. oneidensis is insufficient. Future research on the metabolism of S. oneidensis and interfacial reactions with other materials needs to be deepened, and large-scale reactors should be developed that can be used for practical engineering applications.

Chromium toxicity and its remediation by using endophytic bacteria and nanomaterials: A review

Chromium (Cr) is a crucial element for all life forms. Various anthropogenic activities have been responsible for environmental contamination with Cr (VI) in recent years. For this review, articles were collected using electronic databases such as Web of Science, Pubmed, ProQuest, and Google Scholar as per the guidelines of PRISMA-2015, applying the Boolean search methods. Chromium can cause severe health complications in humans and animals and threatens the surrounding environment, with negative impacts on crop yield, development, and quality. Hence, monitoring Cr contamination is essential, and various remediation technologies have emerged in the past 50 years to reduce the amount of Cr in the environment. This review focuses on chromium exposure and the associated environmental health risks. We also reviewed sustainable remediation processes, with emphasis on nanoparticle and endophytic remediation processes.

Mechanisms of chromium isotope fractionation and the applications in the environment

Chromium (Cr) is a toxic heavy metal that gives rise to environmental pollution and human risk. Chromium stable isotopes have a wide range of applications in both environmental field and earth science field. In this contribution, we focus on the application of the Cr isotope in both tracing pollution sources and monitoring Cr(Ⅵ) pollution. Meanwhile, we also provide a description of the main influencing factors controlling Cr isotope fractionation, chromium isotope analytical methods, and terrestrial Cr release. Chromium isotope tracing of contaminant sources is a new application method, it has a tremendous advantage in searching for the source of Cr pollution, which has not been covered in previous reviews. At the end of the article, the current status of Cr isotope applications in the paleo-environment is explained. Although there are still some uncertainties in practical applications, chromium isotope system shows great promise in the environmental aspects.

Column study of enhanced Cr(VI) removal by bio-permeable reactive barrier constructed from novel iron-based material and Sporosarcina saromensis W5

In this study, the feasibility of Cr(VI) removal from synthetic groundwater by bio-permeable reactive barrier constructed from novel iron-based material (SiO₂/nano-FeC₂O₄ composite, SNFC) and Sporosarcina saromensis W5 was investigated. According to breakthrough study, an enhanced Cr(VI) removal was found in Bio-SNFC column. The Cr(VI) removal performances of biotic column with 0.2 g biomass and 0.4 g biomass were 16.2 mg/g and 17.9 mg/g, respectively, which were 19.6% and 32.1% higher than that of abiotic column (13.5 mg/g). However, excessive biomass (0.9 g) would cause pore clogging and have a negative impact on the Cr(VI) removal performance of the biotic column, whose removal capability (29.1%) was lower than that of abiotic column. The introduction of proper microorganisms enhanced the utilization of iron and enabled a higher proportion of Fe(II) in biotic column, which provided more reactive sites for Cr(VI) removal. The solid phase characterization indicated the generation of Fe(III) oxide/hydroxide on SNFC surface. The removal of Cr(VI) in Bio-SNFC column was depended on reduction-precipitation, and the final products related to chromium were mainly Cr(OH)₃ and Cr₂O₃. The present work provides a new and sustainable remediation technology for in situ bioremediation of Cr(VI)-contaminated groundwater.

Size-dependent visible-light-enhanced Cr(VI) bioreduction by hematite nanoparticles

Light irradiation would affect the electron transfer between dissimilatory metal-reducing bacteria (DMRB) and semiconducting minerals, which may impose a great influence on the biogeochemistry cycle of heavy metals. However, the size effect of semiconducting minerals on the its electron transfer with DMRB and microbial Cr(VI) reduction under visible light irradiation is little known. Herein, the Cr(VI) reduction by Shewanella oneidensis MR-1 (MR-1) was investigated in the presence of hematite nanoparticles with average diameters of 10 nm and 50 nm in dark and under visible light irradiation. It is found that hematite nanoparticles adhered onto MR-1 cells to form the composites, leading to the decrease in surface sites and Zeta potential. Hematite mediated-Cr(VI) bioreduction rate under visible light irradiation was 0.342 h^-1, which is 3.4 folds enhancement compared with that in dark and 4.4 folds compared with the MR-1 alone under visible light irradiation. Decreasing nanoparticle size of hematite from 50 nm to 10 nm promoted the Cr(VI) reduction under visible light irradiation but impeded it in dark. It was deduced that the bioelectrons from MR-1 could promote the separation of photoelectron-hole pairs of light-irradiated hematite, which consequently enhanced the Cr(VI) bioreduction by MR-1-hematite composites. Moreover, mutant strains experiments demonstrated the vital role of c-cytochrome for the conducting network actively established by MR-1 with hematite nanoparticles. Those findings expand the understanding of the electron transfer pathway for enhancing Cr(VI) reduction by hematite-MR-1 composites, and the impact of particle size on the interaction between semiconducting mineral and electroactive bacteria under light irradiation.

Enhanced bio-photodegradation of p-chlorophenol by CdS/g-C3N4 3D semiconductor-microbe interfaces

p-chlorophenol (p-CP), one of the highly toxic chlorinated organic compounds, is recalcitrant in conventional biodegradation process. This study reported a synergistic degradation protocol of 3D semiconductor-microbe interfaces, in which graphite felts (GF) and CdS/g-C₃N₄ nanocomposites were chosen as the carrier and semiconductor for enhanced p-CP degradation. Based on microstructure, photoelectrochemical and degradation performance analysis, the optimal CdS content in CdS/g-C₃N₄ nanocomposites was 10 wt%. The efficiencies of p-CP and TOC removal in bio-photodegradation system were as high as 95% and 77% without extra electron acceptors/donors, which were far better than those in traditional photodegradation and biodegradation system. High-throughput sequencing analysis suggested that p-CP degradation related species (Chryseobacterium, Stenotrophomonas and Rhodopseudomonas), electroactive species (Chryseobacterium, Stenotrophomonas, Hydrogenophaga and Cupriavidus) and hydrogen-utilizing species (Hydrogenophaga and Cupriavidus) were enriched at 3D semiconductor-microbe interfaces. The enrichment of functional species played a crucial role for p-CP removal and mineralization at 3D semiconductor-microbe interfaces. Moreover, the mechanism of enhanced p-CP bio-photodegradation at 3D semiconductor-microbe interfaces was investigated by utilizing Phylogenetic Investigation of Communities by Reconstruction of Unobserved States 2 (PICRUSt2). The results showed that the genes involved in p-CP biodegradation, hydrogen metabolism and extracellular electron transfer were remarkably enriched. Possible mechanism for enhancement of p-CP degradation in bio-photodegradation system was proposed, in which photocatalytic H₂ and photoelectron transfer played an important role for enhancing p-CP mineralization by microbes. 3D semiconductor-microbe interfaces could maintain excellent performance for p-CP degradation after long-term operation, which provide a potential alternative for the enhanced treatment of wastewater containing p-CP.

Microbial response and adaption to thallium contamination in soil profiles

Thallium (Tl) is a trace metal with high toxicity. Comprehensive investigation of spatial distribution of Tl and microorganism is still limited in soils from mining area. In this study, 16S rRNA sequencing and network analysis were used for deciphering the co-occurrence patterns of bacterial communities in two different types of soil profiles around a typical Tl-bearing pyrite mine. The results showed that geochemical parameters (such as pH, S, Tl, Fe and TOM) were the driving forces for shaping the vertical distribution of microbial community. According to network analysis, a wide diversity of microbial modules were present in both soil profiles and affected by depth, significantly associated with variations in Tl geochemical fractionation. Phylogenetic information further unveiled that the microbial modules were mainly dominated by Fe reducing bacteria (FeRB), Fe oxidizing bacteria (FeOB), S oxidizing bacteria and Mn reducing bacteria. The results of metagenome indicated that Fe, Mn and S cycle in soil are closely involved in the biogeochemical cycle of Tl. The findings of co-occurrence patterns in the bacterial network and correlation between microorganisms and different geochemical fractions of Tl may benefit the strategy of bioremediation of Tl-contaminated soils with indigenous microbes.

Enhancing Cr(VI) bio-reduction by conductive materials and enrichment of functional microbes under anaerobic conditions

A few studies reported the impact of mineral conductivity properties on contaminant-mineral-microbe interactions and microbial community structure changes in the interaction process. To fill the gap, conductive minerals (magnetite/hematite) and an insulative mineral (quartz) were introduced into Cr(VI) reduction systems to investigate the effect of mineral conductivity properties on Cr(VI) removal. Results showed that conductive minerals enhanced Cr(VI) reduction rate as compared to insulative minerals. Higher reduction percentage (>86%) was observed when both ERB (extracellular respiratory bacteria) and conductive minerals were presence than those with only minerals (<10%) or ERB (<55%), indicating a synergistic effect existed in this bio-remediation system. Moreover, surface elements detection manifested higher Fe-containing groups and Fe(III)-Cr(III) complexes covered on conductive minerals surface when ERB was present. Electrochemical data suggested that ERB facilitated the activity of electron transference on the surface of conductive minerals. Our results indicated that conductive minerals did act as an "electron shuttle" while insulative minerals increased adsorption sites to accelerate Cr(VI) reduction. 16S rRNA sequences results demonstrated that conductive minerals changed the microbial community structure and increased the diversity of the functional microbes including Pseudomonas spp. and Exiguobacterium spp. This work is of deep significance for better understanding the process of elements biogeochemical and elimination of pollutants.

Mechanism and enhancement of Cr(VI) contaminated groundwater remediation by molasses

The remediation of Cr(VI)-contaminated groundwater with molasses has many advantages compared with traditional in-situ chemical methods, including high cost-effectiveness and negligible secondary contamination. Hence, the reaction conditions and mechanisms of molasses were investigated in this study. The results showed that Cr(VI) was chemically reduced by molasses at acidic pH (3.0), wherein the dominant active components were the hydroxyl and carbonyl groups of molasses. At neutral pH (7.0), molasses mainly acted as an electron donor for direct or indirect reduction of Cr(VI) by microorganisms. The main functional microorganisms were Bacillus and Clostridium Sensu Stricto. Compared with chemical reduction, bio-reduction could completely reduce higher concentrations of Cr(VI) when molasses was added at a concentration of 3 g/L. Ascorbic acid was added to promote the removal rate of bioremediation. Owing to the antioxidant properties of ascorbic acid, the reaction rate increased by 9.3% and 37.5% when 0.05 g/L of ascorbic acid was added to the 50 and 100 mg/L Cr(VI) bioremediation systems, respectively. Due to the decrease in pH during bioremediation, NaHCO₃ was added to buffer the pH changes and promote Cr(III) precipitation. Compared with the addition of NaHCO₃ and molasses simultaneously, separate additions were more effective for precipitation. Furthermore, X-ray absorption near-edge structure analysis revealed that after chemical reduction and biological reduction, Cr was attached to the solid medium in the form of Cr(III).

Synchronous reduction-fixation of reducible heavy metals from aqueous solutions: Application of novel mesoporous MFT/SBA-15 composite materials

The usual treatment for Cr(VI)-contaminated wastewater primarily included reduction, adsorption, and the subsequent separation of the Cr-laden adsorbent. Among these factors, the adsorbent is the most critical factor in determining Cr removal efficiency. In this study, a novel melamine-formaldehyde-thiourea (MFT) chelating resin/mesoporous silica composite material (MFT/SBA-15) was synthesized via a co-condensation method and used for the reduction and fixation of Cr(VI)-contaminated water. Cr(VI) adsorption onto MFT/SBA-15 obeyed the pseudo-second-order model, and the chemical adsorption was the rate-limiting step in the adsorption process. Also it followed the Langmuir adsorption model, with single molecular layer adsorption characteristics. The organic components within MFT/SBA-15 were the core functional groups for Cr(VI) adsorption, and the formation of a coordination bond (CS→Cr) between the lone electron pairs of the S atom and Cr during the adsorption process led to the synchronous reduction-fixation processes of Cr(VI). These synchronous effects were further demonstrated for other reducible heavy metals, including As(V) and Cu(II), but negligibly observed in chemically stable elements, such as Zn(II), Ni(II), Pb(II), Cd(II), and As(III). The novel mesoporous MFT/SBA-15 materials combine the advantages of the chelating resin and mesoporous silica and have excellent potential for the wastewater treatment of reducible heavy metals through synchronous reduction-fixation.

The Variation of Heavy Metals Bioavailability in Sediments of Liujiang River Basin, SW China Associated to Their Speciations and Environmental Fluctuations, a Field Study in Typical Karstic River

The bioavailability of heavy metals (HMs) in sediments is closely related to the security of the aquatic environment, but their impacts are poorly researched, particularly in karstic rivers. Therefore, Liujiang River Basin was taken as an example in this study. Seven HMs were analyzed to determine the bioavailability and speciations of HMs in sediments. Moreover, the impacts of environmental factors on HMs were identified. The obtained results suggested that HMs in the sediments are all within their permissible exposure limit (PEL), but Cd and Zn are significantly higher than the soil baseline. Most HMs were found to be in a residual fraction, while their exchangeable fraction was found to be in an extremely low ratio. HMs in bioavailable parts are significantly higher than in the exchangeable and carbonate-bound phases but lower than in the non-residual phase, which demonstrated that HM bioavailability is not confined to the exchangeable and carbonate-bound phases. The correlation coefficients commonly decreased with decreasing speciation ratios, which suggested that the overall bioavailability of metals should be determined by speciation ratios instead of speciations themselves. Noteworthily, most HMs in the residual form were found to be significantly correlated with their overall bioavailability, which highlighted the potential bioavailability of residual form. The non-correlations between pH, electrical conductivity (EC), total dissolved solids (TDS), and HM bioavailability suggested that HMs in the carbonate-bound phase are stable and unsusceptible to environmental variations, while the significant correlations between redox potential (Eh), turbidity, organic matter (OM), main grain size (Mz), and HM bioavailability suggested that HMs in the reducible and oxidizable forms are susceptible to environmental fluctuations. Therefore, the variation of HM bioavailability in karstic rivers is largely regulated by their reducible and oxidizable forms instead of their carbonate-bound form.

Column study of enhanced Cr(Ⅵ) removal and removal mechanisms by Sporosarcina saromensis W5 assisted bio-permeable reactive barrier

In this study, the performances of Sporosarcina saromensis W5 assisted bio-permeable reactive barrier, containing activated carbon (AC) or zero-valent iron (ZVI), were investigated by column experiments in removal of Cr(Ⅵ) from simulated groundwater. The enhanced Cr(Ⅵ) removal performances were observed in biotic columns. Cr(Ⅵ) was first detected in effluent on day 24 and day 85 in Bio-AC and Bio-ZVI columns, respectively whereas it breakthrough only on day 4 and day 15 in AC and ZVI columns. Additionally, Cr(Ⅵ) removal performances induced by biofilm in Bio-QZ columns were promoted with the increase of influent Cr(Ⅵ) concentrations. According to fluorescent images, activated carbon was found to be the best biofilm carrier. Fe⁰ may not be suitable for microbial colonization because biofilm depolymerization occurred on Fe⁰ surface. Moreover, high concentration of Cr(Ⅵ) would lag the evolution of biofilm. Magnetite generating was found on the Fe⁰ surface. X-ray photoelectron spectroscopy (XPS) analysis indicated that the removal mechanism of Cr(Ⅵ) in biotic columns was biotransformation of Cr(Ⅵ) to Cr(Ш) species. Our results may provide a new insight in Cr(Ⅵ) in-situ remediation from groundwater by Bio-PRB system.

Microbially induced chromium isotope fractionation and trace elements behavior in lower Cambrian microbialites from the Jaíba Member, Bambuí Basin, Brazil

In east-central Brazil, the Ediacaran-Cambrian Bambuí Basin has the potential to provide a record of unique geochemical responses of Earth's ocean and atmosphere evolution during this key time interval. From this perspective, we studied an interval of the upper Bambuí Basin using sedimentologic, stratigraphic, and chemostratigraphic tools. The lower Cambrian Jaíba Member of the uppermost Serra da Saudade Formation is an interval of up to 60 m-thick of carbonate rocks disposed into two shallowing upward trends. Inner to outer ramp and high-energy shoal deposits are described, in which laminated microbialites are the prevailing sedimentary facies. REE + Y data suggest contamination by iron (oxy)hydroxides that are dissociated from the riverine detritic flux. Sedimentary iron enrichment may be related to the settling of iron nanoparticles in coastal environments, diagenetic iron mobilization, or both. MREE enrichment is caused by microbial degradation of organic matter in the iron reduction zone during the anoxic early-diagenetic stage. Chromium isotopes yielded negatively fractionated values (δ⁵³ Cr = -0.69 to -0.27‰), probably resulting from biotic and abiotic reduction of dissolved Cr(VI) to light and less toxic Cr(III) within pores of microbial mats. The δ⁵³ Cr data of the Jaíba microbialite are thus a product of metabolic reactions in microbial mats and do not reflect seawater signal. The isotopic offset from seawater is feasible from molecular diffusion of Cr into pore water and reduction reactions occurring deep inside the mat, although the exact mechanism and consequences are not yet fully understood due to the poor preservation of metabolic reactions in the geological record. Our study suggests that Cr isotopes can be used to reconstruct Cr and other metals cycling within ancient microbial mats, and that caution should be taken when using past microbialites to infer seawater Cr records and redox state of the atmosphere and ocean.

Role of complexation in the photochemical reduction of chromate by acetylacetone

Organic ligands can alter the redox behavior of metal species through the generation of metal-ligand complexes. Photo-induced complexation between ligands and metals is an important, but under-appreciated, aspect of process. Acetylacetone (AA) is a good chelating agent due to keto-enol tautomerization. In the presence of AA, photoreduction of Cr(VI) is accelerated; however, it is unclear exactly how complexation is involved in UV/AA mediated Cr(VI) reduction. On the basis of spectral and kinetic analyses, this study shows that the formation of {Cr(VI)-AA}* complexes is the main mechanism of Cr(VI) reduction by UV/AA. Evidence for this includes (1) the formation rate constant of Cr(III)-AA complexes in the UV system was 2-3 orders of magnitude greater than that in the thermal system; (2) there was a linear relationship between the photons absorbed by AA and the reduction rate constants of Cr(VI); and (3) the reaction appeared initially zero-order in Cr(VI) and turned to first-order as the pool of available Cr(VI) ran out. The results presented here are not only important for the better understanding of the complexation effects in the reduction of Cr(VI), but also crucial for the possible application of the UV/AA process in many other scenarios.

Insight into the mechanism of chemoautotrophic denitrification using pyrite (FeS2) as electron donor

In this study, denitrification was performed using pyrite as sole electron donor. The nitrate reducing rate ranged from 0.61 to 0.95 mM/d. The production of nitrous oxide (N₂O) was observed, accounting for 20% of the total nitrate reduction. The isotope fractionation indicated that N₂O production was mainly caused by the bacterial denitrification, instead of chemical denitrification by Fe(Ⅱ). Thiobacillus was the predominant genus, of which relative abundance decreased after the incubation with pyrite. Conversely, other genera belonging to Actinobacteria, like Rhodococcus, increased by more than 10 times. These Actinobacteria-like bacteria lack nitrous oxide reductase, which might be the reason for high N₂O production. Furthermore, the predicted microbial functions analysis by PICRUSt2 showed that the genes (menC/E/G) involved in the biosynthesis of electron shuttles (menaquinone-related redox-active molecule), which were remarkably enriched during the process, suggesting that the first step of pyrite oxidation might be driven by the microbial derived electron shuttles.

Microbial insights into the biogeochemical features of thallium occurrence: A case study from polluted river sediments

Thallium (Tl) is a trace element with extreme toxicity. Widespread Tl pollution in riverine systems, mainly due to escalating mining and smelting activities of Tl-bearing sulfide minerals, has attracted increasing attention. Insights into the function of the microbial communities with advanced characterization tools are critical for understanding the biogeochemical cycle of Tl. Herein, microbial communities and their adaptive evolution strategies in river sediments from a representative Tl-bearing pyrite mine area in southern China were profiled via 16S rRNA gene sequence analysis and shotgun metagenomic analysis. In total, 64 phyla and 778 genera of microorganisms were observed in the studied sediments. The results showed that pH, Tl, Pb, Zn and total organic carbon (TOC) had a significant influence on microbial community structure. Some important reductive microorganisms (such as Erysipelothrix, Geobacter, desulfatiferula, desulfatihabadium and fusibacter) were involved in the biogeochemical cycle of Tl. The ruv, rec, ars and other resistance genes enhanced the tolerance of microorganisms to Tl. The study suggested that relevant C, N and S cycle genes were the main metabolic paths of microorganisms surviving in the high Tl-polluted environment. The findings were critical for establishment, operation and regulation in the microbial treatment of Tl containing or related wastewater.

The shuttling effects and associated mechanisms of different types of iron oxide nanoparticles for Cu(II) reduction by Geobacter sulfurreducens

Iron oxide nanoparticles (IONPs), commonly occurring in soils, aquifers and subsurface sediments, may serve as important electron shuttles for the biotransformation of coexisting toxic metals. Here, we explored the impact of different IONPs (low-crystallinity goethite and ferrihydrite, high-crystallinity magnetite and hematite) on the reduction of Cu(II) by Geobacter sulfurreducens and the associated electron shuttle mechanisms. All four IONPs tested can function as electron shuttles to enhance long distance electron transfer from bacteria to Cu(II). Upon IONPs addition, the rate of Cu(II) reduction increased from 14.9 to 65.0-83.8 % in solution after 7 days of incubation. Formation of both Cu(I) and Cu(0) on the iron oxide nanoparticles was revealed by the X-ray absorption near-edge spectroscopy. The IONPs can be utilized as conduits by bacteria to directly transfer electrons and they can also reversibly accept and donate electrons as batteries through a charging-discharging cycle to transfer electron. The latter mechanism (geo-battery) played an important role in all four types of IONPs while the former one (geo-conductor) can only be found in the magnetite and hematite treatments due to the higher crystallinity. Our results shed new light on the biogeochemically mediated electron flux in microbe-IONPs-metal networks under anaerobic iron-reduction conditions.

Enhanced biogeogenic controls on dichromate speciation in subsoil containment

In general, lab-based Cr (VI) reduction studies do not often corroborate the prevailing biogeochemical controls for on-site pollution abatement. To promulgate its importance, herein, we investigate the existing biogeogenic parameters of a contaminated site to attenuate the underground Cr (VI) toxicity. This study significantly assesses the speciation of dichromate by biogenic agents that are inherent and self-sustaining to treat the contaminated soil. Herein, a group of bacteria exposed to high concentrations of chromium (≥3500 mg/L) plays a vital role as an enhanced biogeogenic control for the detoxification of toxic Cr (VI). All identified bacteria were screened based on their ability to differentiate from extracellular speciation and harvested in a Cr (VI)-enriched molasses to achieve dichromate concentrations as low as 0.05 mg/L in 168 h. Under low O₂ condition, the bacterial growth rate and doubling time were monitored to establish the half-life period of Cr (VI) for adequate containment treatment. Furthermore, to understand the soil decontamination, Cr (VI) reactive transport was demonstrated to facilitate the contaminant reduction under both saturated and unsaturated groundwater conditions. Herein, Cr (VI) speciation to Cr (III) by the influence of abiogenic factors are unlikely or less probable as studied in existing geogenic conditions. Moreover, the evidence of biogenic reduction of Cr (VI) in microcosm suggests its effectiveness in enhanced detoxification of Cr (VI) up to ≤ 0.1 mg/L, within the reaction period of 144 h and 192 h, for saturated and unsaturated flow conditions, respectively.

A new colitis therapy strategy via the target colonization of magnetic nanoparticle-internalized Roseburia intestinalis

The homeostasis process in the gut tissue of humans relies on intestinal bacteria. However, the intestine is a complex structural tissue with a huge superficial area, and thus the effective application of probiotics in the treatment of Crohn's disease (CD) is still challenging. Herein, we show the feasibility of probiotic target delivery and retention using magnetic iron oxide nanoparticle-internalized Roseburia intestinalis, which can be easily directed by a magnetic field in vitro and in vivo. Subsequently, the increased colonization of this core profitable flora not only resulted in a better therapy effect than traditional intragastric administration but also altered the bacterial composition, leading to a higher diversity in microbial taxa in rats with colitis. Our findings illustrate the exciting opportunities that nanotechnology offers for alternative strategies to modulate biological systems remotely and precisely, which represent a step towards the wireless magnetic manipulation of living biological entities in microbiology.

Monitoring Cr toxicity and remediation processes - combining a whole-cell bioreporter and Cr isotope techniques

Bioremediation is a sustainable and cost-effective means of contaminant detoxification. Although Cr(VI) is toxic at high concentrations, various microbes can utilise it as an electron accepter in the bioremediation process, and reduce it to the less toxic form Cr(III). During remediation, it is important to monitor the level of toxicity and effectiveness of Cr(VI) reduction in order to optimize the conditions. This study employed a whole-cell bioreporter Acinetobacter baylyi ADPWH-recA to access the degree of toxicity of different species of Cr over a range of initial concentrations. It also investigated whether Cr isotope fractionation factors were impacted by different levels of Cr toxicity (related to its concentration) and Cr(VI) reduction rates by Cr resistant bacteria Pseudomonas fluorescens LB 300. The results show that, of both Cr₂O₇^2- and CrO₄^2-, the whole-cell bioreporter was efficient in indicating the level of genotoxicity of Cr(VI) at low concentrations and cytotoxicity at high concentrations via variations of bioluminescence. High concentrations (> 100 mg/L) of Cr(III) could also strongly induce the luminescence in the bioreporter, indicating DNA damage at such abundance. Pseudomonas fluorescens LB 300 was found to be effective in reducing Cr(VI) even when the concentration was high (40 mg/L); however, complete Cr(VI) reduction was only observed at low concentrations (< 5 mg/L), since the toxicity of high concentrations of Cr(VI) impacted the effectiveness of reduction by the bacteria. During reduction, the C53r/C52r ratio of remaining Cr(VI) increased from its initial value, and the calculated fractionation factor by bacterial Cr(VI) reduction (ε) was -3.1±0.3‰. The fractionation factor was independent of the initial Cr(VI) concentration. Therefore, a single Cr isotope fractionation factor can be effectively applied in indicating the extent of bioremediation processing of Cr(VI) over a wide range of concentrations. This significantly simplified monitoring of Cr(VI) depletion in bioremediation, since variations of ε normally indicate a change in the reduction mechanism and therefore would complicate the elucidation of processes driving the remediation.