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Si L, Zhang S, Su X, Li M. Structural basis for the distinct core-antenna assembly of cryptophyte photosystem II. Nat Commun 2024; 15:6812. [PMID: 39122741 PMCID: PMC11316039 DOI: 10.1038/s41467-024-51206-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Accepted: 07/31/2024] [Indexed: 08/12/2024] Open
Abstract
Photosystem II (PSII) catalyzes the light-driven charge separation and water oxidation reactions of photosynthesis. Eukaryotic PSII core is usually associated with membrane-embedded light-harvesting antennae, which greatly increase the absorbance cross-section of the core. The peripheral antennae in different phototrophs vary considerably in protein composition and arrangement. Photosynthetic cryptophytes possess chlorophyll a/c binding proteins (CACs) that serve as their antennae. How these CACs assemble with the PSII core remains unclear. Here, we report the 2.57-Å resolution structure of cryptophyte PSII-CAC purified from cells at nitrogen-limited stationary growth phase. We show that each monomer of the PSII homodimer contains a core complex, six chlorophyll a/c binding proteins (CACs) and a previously unseen chlorophyll-binding protein (termed CAL-II). Six CACs are arranged as a double-layered arc-shaped non-parallel belt, and two such belts attach to the dimeric core from opposite sides. The CAL-II simultaneously interacts with a number of core subunits and five CACs. The distinct organization of CACs and the presence of CAL-II may play a critical role in stabilizing the dimeric PSII-CAC complex under stress conditions. Our study provides mechanistic insights into the assembly and function of the PSII-CAC complex as well as the possible adaptation of cryptophytes in response to environmental stresses.
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Affiliation(s)
- Long Si
- Key Laboratory of Biomacromolecules (CAS), National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Shumeng Zhang
- Key Laboratory of Biomacromolecules (CAS), National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
| | - Xiaodong Su
- Key Laboratory of Biomacromolecules (CAS), National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Mei Li
- Key Laboratory of Biomacromolecules (CAS), National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
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2
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Lohmaneeratana K, Leetanasaksakul K, Thamchaipenet A. Transcriptomic Profiling of Sugarcane White Leaf (SCWL) Canes during Maturation Phase. PLANTS (BASEL, SWITZERLAND) 2024; 13:1551. [PMID: 38891358 PMCID: PMC11174868 DOI: 10.3390/plants13111551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2024] [Revised: 05/24/2024] [Accepted: 05/31/2024] [Indexed: 06/21/2024]
Abstract
Sugarcane white leaf (SCWL) disease, caused by Candidatus Phytoplasma sacchari, results in the most damage to sugarcane plantations. Some SCWL canes can grow unnoticed through the maturation phase, subsequently resulting in an overall low sugar yield, or they can be used accidentally as seed canes. In this work, 12-month-old SCWL and asymptomatic canes growing in the same field were investigated. An abundance of phytoplasma in SCWL canes affected growth and sugar content as well as alterations of transcriptomic profiles corresponding to several pathways that responded to the infection. Suppression of photosynthesis, porphyrin and chlorophyll metabolism, coupled with an increase in the expression of chlorophyllase, contributed to the reduction in chlorophyll levels and photosynthesis. Blockage of sucrose transport plausibly occurred due to the expression of sugar transporters in leaves but suppression in stalks, resulting in low sugar content in canes. Increased expression of genes associated with MAPK cascades, plant hormone signaling transduction, callose plug formation, the phenylpropanoid pathway, and calcium cascades positively promoted defense mechanisms against phytoplasma colonization by an accumulation of lignin and calcium in response to plant immunity. Significant downregulation of CPK plausibly results in a reduction in antioxidant enzymes and likely facilitates pathogen invasion, while expression of sesquiterpene biosynthesis possibly attracts the insect vectors for transmission, thereby enabling the spread of phytoplasma. Moreover, downregulation of flavonoid biosynthesis potentially intensifies the symptoms of SCWL upon challenge by phytoplasma. These SCWL sugarcane transcriptomic profiles describe the first comprehensive sugarcane-phytoplasma interaction during the harvesting stage. Understanding molecular mechanisms will allow for sustainable management and the prevention of SCWL disease-a crucial benefit to the sugar industry.
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Affiliation(s)
- Karan Lohmaneeratana
- Department of Genetics, Faculty of Science, Kasetsart University, Bangkok 10900, Thailand;
| | - Kantinan Leetanasaksakul
- National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Pathumthani 12120, Thailand;
| | - Arinthip Thamchaipenet
- Department of Genetics, Faculty of Science, Kasetsart University, Bangkok 10900, Thailand;
- Omics Center for Agriculture, Bioresources, Food and Health, Kasetsart University (OmiKU), Bangkok 10900, Thailand
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3
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Zazubovich V, Jankowiak R. High-Resolution Frequency-Domain Spectroscopic and Modeling Studies of Photosystem I (PSI), PSI Mutants and PSI Supercomplexes. Int J Mol Sci 2024; 25:3850. [PMID: 38612659 PMCID: PMC11011720 DOI: 10.3390/ijms25073850] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Revised: 03/23/2024] [Accepted: 03/26/2024] [Indexed: 04/14/2024] Open
Abstract
Photosystem I (PSI) is one of the two main pigment-protein complexes where the primary steps of oxygenic photosynthesis take place. This review describes low-temperature frequency-domain experiments (absorption, emission, circular dichroism, resonant and non-resonant hole-burned spectra) and modeling efforts reported for PSI in recent years. In particular, we focus on the spectral hole-burning studies, which are not as common in photosynthesis research as the time-domain spectroscopies. Experimental and modeling data obtained for trimeric cyanobacterial Photosystem I (PSI3), PSI3 mutants, and PSI3-IsiA18 supercomplexes are analyzed to provide a more comprehensive understanding of their excitonic structure and excitation energy transfer (EET) processes. Detailed information on the excitonic structure of photosynthetic complexes is essential to determine the structure-function relationship. We will focus on the so-called "red antenna states" of cyanobacterial PSI, as these states play an important role in photochemical processes and EET pathways. The high-resolution data and modeling studies presented here provide additional information on the energetics of the lowest energy states and their chlorophyll (Chl) compositions, as well as the EET pathways and how they are altered by mutations. We present evidence that the low-energy traps observed in PSI are excitonically coupled states with significant charge-transfer (CT) character. The analysis presented for various optical spectra of PSI3 and PSI3-IsiA18 supercomplexes allowed us to make inferences about EET from the IsiA18 ring to the PSI3 core and demonstrate that the number of entry points varies between sample preparations studied by different groups. In our most recent samples, there most likely are three entry points for EET from the IsiA18 ring per the PSI core monomer, with two of these entry points likely being located next to each other. Therefore, there are nine entry points from the IsiA18 ring to the PSI3 trimer. We anticipate that the data discussed below will stimulate further research in this area, providing even more insight into the structure-based models of these important cyanobacterial photosystems.
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Affiliation(s)
- Valter Zazubovich
- Department of Physics, Concordia University, Montreal, QC H4B 1R6, Canada
| | - Ryszard Jankowiak
- Department of Chemistry, Kansas State University, Manhattan, KS 66506, USA
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4
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Sardar S, Caferri R, Camargo FVA, Capaldi S, Ghezzi A, Dall'Osto L, D'Andrea C, Cerullo G, Bassi R. Site-Directed Mutagenesis of the Chlorophyll-Binding Sites Modulates Excited-State Lifetime and Chlorophyll-Xanthophyll Energy Transfer in the Monomeric Light-Harvesting Complex CP29. J Phys Chem Lett 2024; 15:3149-3158. [PMID: 38478725 DOI: 10.1021/acs.jpclett.3c02900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2024]
Abstract
We combine site-directed mutagenesis with picosecond time-resolved fluorescence and femtosecond transient absorption (TA) spectroscopies to identify excitation energy transfer (EET) processes between chlorophylls (Chls) and xanthophylls (Xant) in the minor antenna complex CP29 assembled inside nanodiscs, which result in quenching. When compared to WT CP29, a longer lifetime was observed in the A2 mutant, missing Chl a612, which closely interacts with Xant Lutein in site L1. Conversely, a shorter lifetime was obtained in the A5 mutant, in which the interaction between Chl a603 and Chl a609 is strengthened, shifting absorption to lower energy and enhancing Chl-Xant EET. Global analysis of TA data indicated that EET from Chl a Qy to a Car dark state S* is active in both the A2 and A5 mutants and that their rate constants are modulated by mutations. Our study provides experimental evidence that multiple Chl-Xant interactions are involved in the quenching activity of CP29.
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Affiliation(s)
- Samim Sardar
- Center for Nano Science and Technology @PoliMi, Istituto Italiano di Tecnologia, Via Rubattino 81, 20134 Milan, Italy
| | - Roberto Caferri
- Dipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Franco V A Camargo
- Istituto di Fotonica e Nanotecnologie, Consiglio Nazionale delle Ricerche, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Stefano Capaldi
- Dipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Alberto Ghezzi
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Luca Dall'Osto
- Dipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Cosimo D'Andrea
- Center for Nano Science and Technology @PoliMi, Istituto Italiano di Tecnologia, Via Rubattino 81, 20134 Milan, Italy
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Giulio Cerullo
- Istituto di Fotonica e Nanotecnologie, Consiglio Nazionale delle Ricerche, Piazza L. da Vinci 32, 20133 Milano, Italy
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Roberto Bassi
- Dipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134 Verona, Italy
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5
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Pereira AM, Martins AO, Batista-Silva W, Condori-Apfata JA, Silva VF, Oliveira LA, Andrade ES, Martins SCV, Medeiros DB, Nascimento VL, Fernie AR, Nunes-Nesi A, Araújo WL. Differential content of leaf and fruit pigment in tomatoes culminate in a complex metabolic reprogramming without growth impacts. JOURNAL OF PLANT PHYSIOLOGY 2024; 293:154170. [PMID: 38271894 DOI: 10.1016/j.jplph.2024.154170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Revised: 12/20/2023] [Accepted: 01/02/2024] [Indexed: 01/27/2024]
Abstract
Although significant efforts to produce carotenoid-enriched foods either by biotechnology or traditional breeding strategies have been carried out, our understanding of how changes in the carotenoid biosynthesis might affect overall plant performance remains limited. Here, we investigate how the metabolic machinery of well characterized tomato carotenoid mutant plants [namely crimson (old gold-og), Delta carotene (Del) and tangerine (t)] adjusts itself to varying carotenoid biosynthesis and whether these adjustments are supported by a reprogramming of photosynthetic and central metabolism in the source organs (leaves). We observed that mutations og, Del and t did not greatly affect vegetative growth, leaf anatomy and gas exchange parameters. However, an exquisite metabolic reprogramming was recorded on the leaves, with an increase in levels of amino acids and reduction of organic acids. Taken together, our results show that despite minor impacts on growth and gas exchange, carbon flux is extensively affected, leading to adjustments in tomato leaves metabolism to support changes in carotenoid biosynthesis on fruits (sinks). We discuss these data in the context of our current understanding of metabolic adjustments and carotenoid biosynthesis as well as regarding to improving human nutrition.
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Affiliation(s)
- Auderlan M Pereira
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Auxiliadora O Martins
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - William Batista-Silva
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Jorge A Condori-Apfata
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Victor F Silva
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Leonardo A Oliveira
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Eduarda Santos Andrade
- Setor de Fisiologia Vegetal - Departamento de Biologia, Universidade Federal de Lavras, Lavras, Minas Gerais, 37200-000, Brazil
| | - Samuel C V Martins
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - David B Medeiros
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Vitor L Nascimento
- Setor de Fisiologia Vegetal - Departamento de Biologia, Universidade Federal de Lavras, Lavras, Minas Gerais, 37200-000, Brazil
| | - Alisdair R Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam Golm, Germany
| | - Adriano Nunes-Nesi
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Wagner L Araújo
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil.
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6
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Thompson LM, Kempfer-Robertson EM, Saha S, Parmar S, Kozlowski PM. Nonorthogonal Multireference Wave Function Description of Triplet-Triplet Energy Transfer Couplings. J Chem Theory Comput 2023; 19:7685-7694. [PMID: 37862602 DOI: 10.1021/acs.jctc.3c00898] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2023]
Abstract
In this study, the use of self-consistent field quasi-diabats is investigated for calculation of triplet energy transfer diabatic coupling elements. It is proposed that self-consistent field quasi-diabats are particularly useful for studying energy transfer (EnT) processes because orbital relaxation in response to changes in electron configuration is implicitly built into the model. The conceptual model that is developed allows for the simultaneous evaluation of direct and charge-transfer mechanisms to establish the importance of the different possible EnT mechanisms. The method's performance is evaluated using two model systems: the ethylene dimer and ethylene with the methaniminium cation. While states that mediate the charge-transfer mechanism were found to be higher in energy than the states involved in the direct mechanism, the coupling elements that control the kinetics were found to be significantly larger in the charge-transfer mechanism. Subsequently, we discuss the advantage of the approach in the context of practical difficulties with the use of established approaches.
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Affiliation(s)
- Lee M Thompson
- Department of Chemistry, University of Louisville, Louisville, Kentucky 40929, United States
| | | | - Saptarshi Saha
- Department of Chemistry, University of Louisville, Louisville, Kentucky 40929, United States
| | - Saurav Parmar
- Department of Chemistry, University of Louisville, Louisville, Kentucky 40929, United States
| | - Pawel M Kozlowski
- Department of Chemistry, University of Louisville, Louisville, Kentucky 40929, United States
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7
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Le VV, Tran QG, Ko SR, Lee SA, Oh HM, Kim HS, Ahn CY. How do freshwater microalgae and cyanobacteria respond to antibiotics? Crit Rev Biotechnol 2023; 43:191-211. [PMID: 35189751 DOI: 10.1080/07388551.2022.2026870] [Citation(s) in RCA: 15] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Antibiotic pollution is an emerging environmental challenge. Residual antibiotics from various sources, including municipal and industrial wastewater, sewage discharges, and agricultural runoff, are continuously released into freshwater environments, turning them into reservoirs that contribute to the development and spread of antibiotic resistance. Thus, it is essential to understand the impacts of antibiotic residues on aquatic organisms, especially microalgae and cyanobacteria, due to their crucial roles as primary producers in the ecosystem. This review summarizes the effects of antibiotics on major biological processes in freshwater microalgae and cyanobacteria, including photosynthesis, oxidative stress, and the metabolism of macromolecules. Their adaptive mechanisms to antibiotics exposure, such as biodegradation, bioadsorption, and bioaccumulation, are also discussed. Moreover, this review highlights the important factors affecting the antibiotic removal pathways by these organisms, which will promote the use of microalgae-based technology for the removal of antibiotics. Finally, we offer some perspectives on the opportunities for further studies and applications.
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Affiliation(s)
- Ve Van Le
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea.,Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science and Technology, Daejeon, Korea
| | - Quynh-Giao Tran
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea
| | - So-Ra Ko
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea
| | - Sang-Ah Lee
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea.,Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science and Technology, Daejeon, Korea
| | - Hee-Mock Oh
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea.,Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science and Technology, Daejeon, Korea
| | - Hee-Sik Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea.,Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science and Technology, Daejeon, Korea
| | - Chi-Yong Ahn
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea.,Department of Environmental Biotechnology, KRIBB School of Biotechnology, University of Science and Technology, Daejeon, Korea
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8
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Lu L, Song Y, Liu W, Jiang L. Excitation-Dependence of Excited-State Dynamics and Vibrational Relaxation of Lutein Explored by Multiplex Transient Grating. ACS OMEGA 2022; 7:48250-48260. [PMID: 36591184 PMCID: PMC9798734 DOI: 10.1021/acsomega.2c06371] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Accepted: 11/28/2022] [Indexed: 06/17/2023]
Abstract
Multiplex transient grating (MTG) spectroscopy was applied to lutein in ethanol to investigate the excitation-energy dependence of the excited-state dynamics and vibrational relaxation. The transient spectra obtained upon low (480 nm) and high-energy (380 nm) excitation both recorded a strong excited-state absorption (ESA) of S1 → S n as well as a broad band in the blue wavelength that was previously proposed as the S* state. By means of Gaussian decomposition and global fitting of the ESA band, a long-time component assigned to the triplet state was derived from the kinetic trace of 480 nm excitation. Moreover, the MTG signal with a resolution of 110 fs displayed the short-time quantum beat signal. In order to unveil the vibrational coherence in the excited-state decay, the linear and non-linear simulations of the steady spectrum and dynamic signals were presented in which at least three fundamental modes standing for C-C stretching (ν1), C=C stretching (ν2), and O-H valence vibrations (ν3) were considered to analyze the experimental signals. It was identified that the vibrational coherence between ν1 and ν3 or ν2 and ν3 was responsible for quantum beat that may be associated with the triplet state. We concluded that upon low- or high-energy excitation into the S2 state, the photo-isomerization of the molecule and structural recovery on the time-scale of vibrational cooling are the key factors to form a mixed conformation in the hot-S1 state that is the precursor of a long life-time triplet.
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Affiliation(s)
- Liping Lu
- College
of Science, Nanjing Agricultural University, Nanjing, Jiangsu210095, China
| | - Yunfei Song
- National
Key Laboratory of Shock Wave and Detonation Physics, Institute of Fluid Physics, China Academy of Engineering Physics, Mianyang, Sichuan621900, China
| | - Weilong Liu
- Department
of Physics, Harbin Institute of Technology, Harbin, Heilongjiang150080, China
| | - Lilin Jiang
- Office
of Academic Research, Hezhou University, Hezhou, Guangxi542899, China
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9
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Sardar S, Caferri R, Camargo FVA, Pamos Serrano J, Ghezzi A, Capaldi S, Dall’Osto L, Bassi R, D’Andrea C, Cerullo G. Molecular mechanisms of light harvesting in the minor antenna CP29 in near-native membrane lipidic environment. J Chem Phys 2022; 156:205101. [DOI: 10.1063/5.0087898] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
CP29, a chlorophyll a/ b-xanthophyll binding protein, bridges energy transfer between the major LHCII antenna complexes and photosystem II reaction centers. It hosts one of the two identified quenching sites, making it crucial for regulated photoprotection mechanisms. Until now, the photophysics of CP29 has been studied on the purified protein in detergent solutions since spectrally overlapping signals affect in vivo measurements. However, the protein in detergent assumes non-native conformations compared to its physiological state in the thylakoid membrane. Here, we report a detailed photophysical study on CP29 inserted in discoidal lipid bilayers, known as nanodiscs, which mimic the native membrane environment. Using picosecond time-resolved fluorescence and femtosecond transient absorption (TA), we observed shortening of the Chl fluorescence lifetime with a decrease of the carotenoid triplet formation yield for CP29 in nanodiscs as compared to the protein in detergent. Global analysis of TA data suggests a 1Chl* quenching mechanism dependent on excitation energy transfer to a carotenoid dark state, likely the proposed S*, which is believed to be formed due to a carotenoid conformational change affecting the S1 state. We suggest that the accessibility of the S* state in different local environments plays a key role in determining the quenching of Chl excited states. In vivo, non-photochemical quenching is activated by de-epoxidation of violaxanthin into zeaxanthin. CP29-zeaxanthin in nanodiscs further shortens the Chl lifetime, which underlines the critical role of zeaxanthin in modulating photoprotection activity.
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Affiliation(s)
- Samim Sardar
- Center for Nano Science and Technology@PoliMi, Istituto Italiano di Tecnologia, 20133 Milan, Italy
| | - Roberto Caferri
- Dipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Franco V. A. Camargo
- Istituto di Fotonica e Nanotecnologie, Consiglio Nazionale delle Ricerche, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Javier Pamos Serrano
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Alberto Ghezzi
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Stefano Capaldi
- Dipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Luca Dall’Osto
- Dipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Roberto Bassi
- Dipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Cosimo D’Andrea
- Center for Nano Science and Technology@PoliMi, Istituto Italiano di Tecnologia, 20133 Milan, Italy
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Giulio Cerullo
- Istituto di Fotonica e Nanotecnologie, Consiglio Nazionale delle Ricerche, Piazza L. da Vinci 32, 20133 Milano, Italy
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
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10
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Li X, Ding M, Wang M, Yang S, Ma X, Hu J, Song F, Wang L, Liang W. Proteome profiling reveals changes in energy metabolism, transport and antioxidation during drought stress in Nostoc flagelliforme. BMC PLANT BIOLOGY 2022; 22:162. [PMID: 35365086 PMCID: PMC8973743 DOI: 10.1186/s12870-022-03542-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2021] [Accepted: 03/18/2022] [Indexed: 05/27/2023]
Abstract
BACKGROUND Drought is an important abiotic stress that constrains the growth of many species. Despite extensive study in model organisms, the underlying mechanisms of drought tolerance in Nostoc flagelliforme remain elusive. RESULTS We characterized the drought adaptation of N. flagelliforme by a combination of proteomics and qRT-PCR. A total of 351 differentially expressed proteins involved in drought stress adaptation were identified. It was found that the expression of several nutrient influx transporters was increased, including molybdate ABC transporter substrate binding protein (modA), sulfate ABC transporter substrate-binding protein (sbp) and nitrate ABC transporter (ntrB), while that of efflux transporters for toxic substances was also increased, including arsenic transporting ATPase (ArsA), potassium transporter (TrkA) and iron ABC transporter substrate-binding protein (VacB). Additionally, photosynthetic components were reduced while sugars built up during drought stress. Non-enzymatic antioxidants, orange carotenoid protein (OCP) homologs, cytochrome P450 (CYP450), proline (Pro) and ascorbic acid (AsA) were all altered during drought stress and may play important roles in scavenging reactive oxygen species (ROS). CONCLUSION In this study, N. flagelliforme may regulates its adaptation to drought stress through the changes of protein expression in photosynthesis, energy metabolism, transport, protein synthesis and degradation and antioxidation. HIGHLIGHTS • A total of 351 DEPs involved in adaptation to drought stress were identified. • Changes in the expression of six OCP homologs were found in response to drought stress. • Differential expression of transporters played an important role in drought stress adaptation. • Most PSII proteins were downregulated, while PSI proteins were unchanged in response to drought stress. • Sugar metabolism was upregulated in response to drought stress.
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Affiliation(s)
- Xiaoxu Li
- College of Life Sciences, Ningxia University, Yinchuan, 750021, China
| | - Miaomiao Ding
- College of Life Sciences, Ningxia University, Yinchuan, 750021, China
| | - Meng Wang
- College of Life Sciences, Ningxia University, Yinchuan, 750021, China
| | - Shujuan Yang
- College of Life Sciences, Ningxia University, Yinchuan, 750021, China
| | - Xiaorong Ma
- College of Life Sciences, Ningxia University, Yinchuan, 750021, China
| | - Jinhong Hu
- College of Life Sciences, Ningxia University, Yinchuan, 750021, China
| | - Fan Song
- College of Life Sciences, Ningxia University, Yinchuan, 750021, China
| | - Lingxia Wang
- College of Life Sciences, Ningxia University, Yinchuan, 750021, China.
| | - Wenyu Liang
- College of Life Sciences, Ningxia University, Yinchuan, 750021, China.
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11
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Fluorescence of carotenoids: Probing binding site interactions and conformational motion in carotenoproteins. Methods Enzymol 2022; 674:85-111. [DOI: 10.1016/bs.mie.2022.04.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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12
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Sandmann G. Diversity and origin of carotenoid biosynthesis: its history of coevolution towards plant photosynthesis. THE NEW PHYTOLOGIST 2021; 232:479-493. [PMID: 34324713 DOI: 10.1111/nph.17655] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Accepted: 07/06/2021] [Indexed: 06/13/2023]
Abstract
The development of photosynthesis was a highlight in the progression of bacteria. In addition to the photosystems with their structural proteins, the photosynthesis apparatus consists of different cofactors including essential carotenoids. Thus, the evolution of the carotenoid pathways in relation to the functionality of the resulting structures in photosynthesis is the focus of this review. Analysis of carotenoid pathway genes indicates early evolutionary roots in prokaryotes. The pathway complexity leading to a multitude of structures is a result of gene acquisition, including their functional modifications, emergence of novel genes and gene exchange between species. Along with the progression of photosynthesis, carotenoid pathways coevolved with photosynthesis according to their advancing functionality. Cyanobacteria, with their oxygenic photosynthesis, became a landmark for evolutionary events including carotenogenesis. Concurrent with endosymbiosis, the cyanobacterial carotenoid pathways were inherited into algal plastids. In the lineage leading to Chlorophyta and plants, carotenoids evolved to their prominent role in protection and regulation of light energy input as constituents of a highly efficient light-harvesting complex.
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Affiliation(s)
- Gerhard Sandmann
- Institute of Molecular Biosciences, Goethe-University Frankfurt/M, Max von Laue Str. 9, Frankfurt, D-60438, Germany
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13
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Filippov MA, Tatarnikova OG, Pozdnyakova NV, Vorobyov VV. Inflammation/bioenergetics-associated neurodegenerative pathologies and concomitant diseases: a role of mitochondria targeted catalase and xanthophylls. Neural Regen Res 2021; 16:223-233. [PMID: 32859768 PMCID: PMC7896239 DOI: 10.4103/1673-5374.290878] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Revised: 02/23/2020] [Accepted: 03/23/2020] [Indexed: 02/07/2023] Open
Abstract
Various inflammatory stimuli are able to modify or even "re-program" the mitochondrial metabolism that results in generation of reactive oxygen species. In noncommunicable chronic diseases such as atherosclerosis and other cardiovascular pathologies, type 2 diabetes and metabolic syndrome, these modifications become systemic and are characterized by chronic inflammation and, in particular, "neuroinflammation" in the central nervous system. The processes associated with chronic inflammation are frequently grouped into "vicious circles" which are able to stimulate each other constantly amplifying the pathological events. These circles are evidently observed in Alzheimer's disease, atherosclerosis, type 2 diabetes, metabolic syndrome and, possibly, other associated pathologies. Furthermore, chronic inflammation in peripheral tissues is frequently concomitant to Alzheimer's disease. This is supposedly associated with some common genetic polymorphisms, for example, Apolipoprotein-E ε4 allele carriers with Alzheimer's disease can also develop atherosclerosis. Notably, in the transgenic mice expressing the recombinant mitochondria targeted catalase, that removes hydrogen peroxide from mitochondria, demonstrates the significant pathology amelioration and health improvements. In addition, the beneficial effects of some natural products from the xanthophyll family, astaxanthin and fucoxanthin, which are able to target the reactive oxygen species at cellular or mitochondrial membranes, have been demonstrated in both animal and human studies. We propose that the normalization of mitochondrial functions could play a key role in the treatment of neurodegenerative disorders and other noncommunicable diseases associated with chronic inflammation in ageing. Furthermore, some prospective drugs based on mitochondria targeted catalase or xanthophylls could be used as an effective treatment of these pathologies, especially at early stages of their development.
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Affiliation(s)
| | | | | | - Vasily V. Vorobyov
- Institute of Cell Biophysics, Russian Academy of Sciences, Pushchino, Russia
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14
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Śliwińska-Wilczewska S, Konarzewska Z, Wiśniewska K, Konik M. Photosynthetic Pigments Changes of Three Phenotypes of Picocyanobacteria Synechococcus sp. under Different Light and Temperature Conditions. Cells 2020; 9:cells9092030. [PMID: 32899279 PMCID: PMC7563753 DOI: 10.3390/cells9092030] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2020] [Revised: 08/26/2020] [Accepted: 09/01/2020] [Indexed: 11/30/2022] Open
Abstract
It is estimated that the genus Synechococcus is responsible for about 17% of net primary production in the Global Ocean. Blooms of these organisms are observed in tropical, subtropical and even temperate zones, and they have been recorded recently even beyond the polar circle. The long-term scenarios forecast a growing expansion of Synechococcus sp. and its area of dominance. This is, among others, due to their high physiological plasticity in relation to changing environmental conditions. Three phenotypes of the genus Synechococcus sp. (Type 1, Type 2, and Type 3a) were tested in controlled laboratory conditions in order to identify their response to various irradiance (10, 55, 100 and 145 µmol photons m−2 s−1) and temperature (15, 22.5 and 30 °C) conditions. The highest total pigment content per cell was recorded at 10 μmol photons m−2 s−1 at all temperature variants with the clear dominance of phycobilins among all the pigments. In almost every variant the highest growth rate was recorded for the Type 1. The lowest growth rates were observed, in general, for the Type 3a. However, it was recognized to be less temperature sensitive in comparison to the other two types and rather light-driven with the highest plasticity and adaptation potential. The highest amounts of carotenoids were produced by Type 2 which also showed signs of the cell stress even around 55 μmol photons m−2 s−1 at 15 °C and 22.5 °C. This may imply that the Type 2 is the most susceptible to higher irradiances. Picocyanobacteria Synechococcus sp. require less light intensity to achieve the maximum rate of photosynthesis than larger algae. They also tolerate a wide range of temperatures which combined together make them gain a powerful competitive advantage. Our results will provide key information for the ecohydrodynamical model development. Thus, this work would be an important link in forecasting future changes in the occurrence of these organisms in the context of global warming.
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Affiliation(s)
- Sylwia Śliwińska-Wilczewska
- Division of Marine Ecosystems Functioning, Institute of Oceanography, University of Gdansk, Avenue Piłsudskiego 46, P-81-378 Gdynia, Poland;
- Correspondence: ; Tel.: +48-58-523-68-92
| | - Zofia Konarzewska
- Division of Marine Ecosystems Functioning, Institute of Oceanography, University of Gdansk, Avenue Piłsudskiego 46, P-81-378 Gdynia, Poland;
| | - Kinga Wiśniewska
- Division of Marine Chemistry and Environmental Protection, Institute of Oceanography, University of Gdansk, Avenue Piłsudskiego 46, P-81-378 Gdynia, Poland;
| | - Marta Konik
- Department of Marine Physics, Institute of Oceanology Polish Academy of Sciences, P-81-779 Sopot, Poland;
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Izuhara T, Kaihatsu I, Jimbo H, Takaichi S, Nishiyama Y. Elevated Levels of Specific Carotenoids During Acclimation to Strong Light Protect the Repair of Photosystem II in Synechocystis sp. PCC 6803. FRONTIERS IN PLANT SCIENCE 2020; 11:1030. [PMID: 32733521 PMCID: PMC7358549 DOI: 10.3389/fpls.2020.01030] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Accepted: 06/23/2020] [Indexed: 06/11/2023]
Abstract
The tolerance of photosynthesis to strong light increases in photosynthetic organisms during acclimation to strong light. We investigated the role of carotenoids in the protection of photosystem II (PSII) from photoinhibition after acclimation to strong light in the cyanobacterium Synechocystis sp. PCC 6803. In cells that had been grown under strong light at 1,000 μmol photons m-2 s-1 (SL), specific carotenoids, namely, zeaxanthin, echinenone, and myxoxanthophyll, accumulated at high levels, and the photoinhibition of PSII was less marked than in cells that had been grown under standard growth light at 70 μmol photons m-2 s-1 (GL). The rate of photodamage to PSII, as monitored in the presence of lincomycin, did not differ between cells grown under SL and GL, suggesting that the mitigation of photoinhibition after acclimation to SL might be attributable to the enhanced ability to repair PSII. When cells grown under GL were transferred to SL, the mitigation of photoinhibition of PSII occurred in two distinct stages: a first stage that lasted 4 h and the second stage that occurred after 8 h. During the second stage, the accumulation of specific carotenoids was detected, together with enhanced synthesis de novo of proteins that are required for the repair of PSII, such as the D1 protein, and suppression of the production of singlet oxygen (1O2). In the ΔcrtRΔcrtO mutant of Synechocystis, which lacks zeaxanthin, echinenone, and myxoxanthophyll, the mitigation of photoinhibition of PSII, the enhancement of protein synthesis, and the suppression of production of 1O2 were significantly impaired during the second stage of acclimation. Thus, elevated levels of the specific carotenoids during acclimation to strong light appeared to protect protein synthesis from 1O2, with the resultant mitigation of photoinhibition of PSII.
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Affiliation(s)
- Taichi Izuhara
- Department of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, Saitama, Japan
| | - Ikumi Kaihatsu
- Department of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, Saitama, Japan
| | - Haruhiko Jimbo
- Graduate School of Art and Sciences, The University of Tokyo, Tokyo, Japan
| | - Shinichi Takaichi
- Department of Molecular Microbiology, Faculty of Life Sciences, Tokyo University of Agriculture, Tokyo, Japan
| | - Yoshitaka Nishiyama
- Department of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, Saitama, Japan
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16
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Kuczynska P, Jemiola-Rzeminska M, Nowicka B, Jakubowska A, Strzalka W, Burda K, Strzalka K. The xanthophyll cycle in diatom Phaeodactylum tricornutum in response to light stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 152:125-137. [PMID: 32416342 DOI: 10.1016/j.plaphy.2020.04.043] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Revised: 04/27/2020] [Accepted: 04/30/2020] [Indexed: 05/11/2023]
Abstract
Chosen aspects of the functioning of diadinoxanthin cycle in a model diatom Phaeodactylum tricornutum grown under low light conditions (LL) and under high light conditions (HL), which cause activation of violaxanthin cycle, were examined. Heterogeneity of the kinetics of diadinoxanthin ↔ diatoxanthin conversions regulated by de-epoxidase/epoxidase enzymes was detected. Three different rates of diadinoxanthin de-epoxidation (τ > 20 min, 5 min > τ > 1.5 min and τ ≤ 1 min) were observed. Appearance and contribution of these phases depended on the light conditions and xanthophylls subpopulations in membranes. Moreover, diadinoxanthin de-epoxidation was postulated to occur in darkness and its rate was estimated to be almost two times faster (τ ≈ 14 min) than diatoxanthin-epoxidation in LL- and HL-grown diatoms collected after the dark phase of the photoperiod and exposed to very high light and subsequent darkness. The level of lipid hydroperoxides and the expression of genes encoding xanthophyll cycle enzymes was measured. Our observations suggest that isoforms of these enzymes may participate in carotenoid synthesis or be exclusively involved in xanthophyll conversions. Violaxanthin cycle pigments present in HL-acclimated diatoms change thermodynamic properties of thylakoid membranes. Zeaxanthin is known to localize preferentially in the inner part of the lipid bilayer and diatoxanthin in its outer part. The different localization of these pigments probably decide about their complementary action in protection of the membranes against reactive oxygen species.
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Affiliation(s)
- Paulina Kuczynska
- Department of Plant Physiology and Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387, Krakow, Poland
| | - Malgorzata Jemiola-Rzeminska
- Department of Plant Physiology and Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387, Krakow, Poland; Malopolska Centre of Biotechnology, Jagiellonian University, Gronostajowa 7A, 30-387, Krakow, Poland
| | - Beatrycze Nowicka
- Department of Plant Physiology and Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387, Krakow, Poland.
| | - Agata Jakubowska
- Department of Plant Biotechnology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387, Krakow, Poland
| | - Wojciech Strzalka
- Department of Plant Biotechnology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387, Krakow, Poland
| | - Kvetoslava Burda
- Faculty of Physics and Applied Computer Science, University of Science and Technology, Reymonta 19, 30-059, Krakow, Poland
| | - Kazimierz Strzalka
- Department of Plant Physiology and Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387, Krakow, Poland; Malopolska Centre of Biotechnology, Jagiellonian University, Gronostajowa 7A, 30-387, Krakow, Poland
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17
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Kannchen D, Zabret J, Oworah-Nkruma R, Dyczmons-Nowaczyk N, Wiegand K, Löbbert P, Frank A, Nowaczyk MM, Rexroth S, Rögner M. Remodeling of photosynthetic electron transport in Synechocystis sp. PCC 6803 for future hydrogen production from water. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2020; 1861:148208. [PMID: 32339488 DOI: 10.1016/j.bbabio.2020.148208] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2019] [Revised: 03/16/2020] [Accepted: 04/14/2020] [Indexed: 02/06/2023]
Abstract
Photosynthetic microorganisms such as the cyanobacterium Synechocystis sp. PCC 6803 (Synechocystis) can be exploited for the light-driven synthesis of valuable compounds. Thermodynamically, it is most beneficial to branch-off photosynthetic electrons at ferredoxin (Fd), which provides electrons for a variety of fundamental metabolic pathways in the cell, with the ferredoxin-NADP+ Oxido-Reductase (FNR, PetH) being the main target. In order to re-direct electrons from Fd to another consumer, the high electron transport rate between Fd and FNR has to be reduced. Based on our previous in vitro experiments, corresponding FNR-mutants at position FNR_K190 (Wiegand, K., et al.: "Rational redesign of the ferredoxin-NADP-oxido-reductase/ferredoxin-interaction for photosynthesis-dependent H2-production". Biochim Biophys Acta, 2018) have been generated in Synechocystis cells to study their impact on the cellular metabolism and their potential for a future hydrogen-producing design cell. Out of two promising candidates, mutation FNR_K190D proved to be lethal due to oxidative stress, while FNR_K190A was successfully generated and characterized: The light induced NADPH formation is clearly impaired in this mutant and it shows also major metabolic adaptations like a higher glucose metabolism as evidenced by quantitative mass spectrometric analysis. These results indicate a high potential for the future use of photosynthetic electrons in engineered design cells - for instance for hydrogen production. They also show substantial differences of interacting proteins in an in vitro environment vs. physiological conditions in whole cells.
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Affiliation(s)
- Daniela Kannchen
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Jure Zabret
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Regina Oworah-Nkruma
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Nina Dyczmons-Nowaczyk
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Katrin Wiegand
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Pia Löbbert
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Anna Frank
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Marc Michael Nowaczyk
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Sascha Rexroth
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Matthias Rögner
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, 44780 Bochum, Germany.
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18
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Zhao X, Hu K, Yan M, Yi B, Wen J, Ma C, Shen J, Fu T, Tu J. Disruption of carotene biosynthesis leads to abnormal plastids and variegated leaves in Brassica napus. Mol Genet Genomics 2020; 295:981-999. [PMID: 32306107 PMCID: PMC7297816 DOI: 10.1007/s00438-020-01674-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Accepted: 04/02/2020] [Indexed: 12/12/2022]
Abstract
Leaf color is an important characteristic of normal chloroplast development. Variegated plants have green- and white-sectored leaves, which can be used to identify important pathways and molecular mechanisms of chloroplast development. We studied two Brassica napus variegation mutants from same one variegated ancestor, designated ZY-4 and ZY-8, which have different degrees of variegation. When grown in identical conditions, the ratio of white sectors in ZY-4 leaves is higher than in ZY-8. In both mutants, the cells in green sectors contain normal chloroplasts; while, the cells in white sectors contain abnormal plastids. Seedling chloroplasts ultrastructure of both mutants showed that the biogenesis of chloroplasts was blocked in early stages; delayed development and structual damage in ZY-4 were more serious than in ZY-8. Employing bulked segregant analysis(BSA), two bulks (BY142 and BY137) from BC2F1 lines derived from ZY-4 and ZS11, and one bulk (BY56) from BC2F1 lines derived from ZY-8 and ZS11, and screening by Brassica 60K SNP BeadChip Array, showed the candidate regions localized in chromosome A08 (BY142), C04 (BY137), and A08 (BY56), respectively. Transcriptome analysis of five seedling development stages of ZY-4, ZY-8, and ZS11 showed that photosynthesis, energy metabolism-related pathways and translation-related pathways were important for chloroplast biogenesis. The number of down- or up-regulated genes related to immune system process in ZY-4 was more than in ZY-8. The retrograde signaling pathway was mis-regulated in both mutants. DEG analysis indicated that both mutants showed photooxidative damages. By coupling transcriptome and BSA CHIP analyses, some candidate genes were identified. The gene expression pattern of carotene biosynthesis pathway was disrupted in both mutants. However, histochemical analysis of ROS revealed that there was no excessive accumulation of ROS in ZY-4 and ZY-8. Taken together, our data indicate that the disruption of carotene biosynthetic pathways leads to the variegation phenotypes of ZY-4 and ZY-8 and there are some functions that can compensate for the disruption of carotene biosynthesis in ZY-4 and ZY-8 to reduce ROS and prevent seedling mortality.
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Affiliation(s)
- Xiaobin Zhao
- National Key Laboratory of Crop Genetic Improvement, National Sub-Center of Rapeseed Improvement in Wuhan, Huazhong Agricultural University, Wuhan, People's Republic of China
| | - Kaining Hu
- National Key Laboratory of Crop Genetic Improvement, National Sub-Center of Rapeseed Improvement in Wuhan, Huazhong Agricultural University, Wuhan, People's Republic of China
| | - Mengjiao Yan
- National Key Laboratory of Crop Genetic Improvement, National Sub-Center of Rapeseed Improvement in Wuhan, Huazhong Agricultural University, Wuhan, People's Republic of China
| | - Bin Yi
- National Key Laboratory of Crop Genetic Improvement, National Sub-Center of Rapeseed Improvement in Wuhan, Huazhong Agricultural University, Wuhan, People's Republic of China
| | - Jing Wen
- National Key Laboratory of Crop Genetic Improvement, National Sub-Center of Rapeseed Improvement in Wuhan, Huazhong Agricultural University, Wuhan, People's Republic of China
| | - Chaozhi Ma
- National Key Laboratory of Crop Genetic Improvement, National Sub-Center of Rapeseed Improvement in Wuhan, Huazhong Agricultural University, Wuhan, People's Republic of China
| | - Jinxiong Shen
- National Key Laboratory of Crop Genetic Improvement, National Sub-Center of Rapeseed Improvement in Wuhan, Huazhong Agricultural University, Wuhan, People's Republic of China
| | - Tingdong Fu
- National Key Laboratory of Crop Genetic Improvement, National Sub-Center of Rapeseed Improvement in Wuhan, Huazhong Agricultural University, Wuhan, People's Republic of China
| | - Jinxing Tu
- National Key Laboratory of Crop Genetic Improvement, National Sub-Center of Rapeseed Improvement in Wuhan, Huazhong Agricultural University, Wuhan, People's Republic of China.
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19
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Nelson TR, White AJ, Bjorgaard JA, Sifain AE, Zhang Y, Nebgen B, Fernandez-Alberti S, Mozyrsky D, Roitberg AE, Tretiak S. Non-adiabatic Excited-State Molecular Dynamics: Theory and Applications for Modeling Photophysics in Extended Molecular Materials. Chem Rev 2020; 120:2215-2287. [PMID: 32040312 DOI: 10.1021/acs.chemrev.9b00447] [Citation(s) in RCA: 213] [Impact Index Per Article: 53.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Optically active molecular materials, such as organic conjugated polymers and biological systems, are characterized by strong coupling between electronic and vibrational degrees of freedom. Typically, simulations must go beyond the Born-Oppenheimer approximation to account for non-adiabatic coupling between excited states. Indeed, non-adiabatic dynamics is commonly associated with exciton dynamics and photophysics involving charge and energy transfer, as well as exciton dissociation and charge recombination. Understanding the photoinduced dynamics in such materials is vital to providing an accurate description of exciton formation, evolution, and decay. This interdisciplinary field has matured significantly over the past decades. Formulation of new theoretical frameworks, development of more efficient and accurate computational algorithms, and evolution of high-performance computer hardware has extended these simulations to very large molecular systems with hundreds of atoms, including numerous studies of organic semiconductors and biomolecules. In this Review, we will describe recent theoretical advances including treatment of electronic decoherence in surface-hopping methods, the role of solvent effects, trivial unavoided crossings, analysis of data based on transition densities, and efficient computational implementations of these numerical methods. We also emphasize newly developed semiclassical approaches, based on the Gaussian approximation, which retain phase and width information to account for significant decoherence and interference effects while maintaining the high efficiency of surface-hopping approaches. The above developments have been employed to successfully describe photophysics in a variety of molecular materials.
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Affiliation(s)
- Tammie R Nelson
- Theoretical Division , Los Alamos National Laboratory , Los Alamos , New Mexico 87545 , United States
| | - Alexander J White
- Theoretical Division , Los Alamos National Laboratory , Los Alamos , New Mexico 87545 , United States
| | - Josiah A Bjorgaard
- Theoretical Division , Los Alamos National Laboratory , Los Alamos , New Mexico 87545 , United States
| | - Andrew E Sifain
- Theoretical Division , Los Alamos National Laboratory , Los Alamos , New Mexico 87545 , United States.,U.S. Army Research Laboratory , Aberdeen Proving Ground , Maryland 21005 , United States
| | - Yu Zhang
- Theoretical Division , Los Alamos National Laboratory , Los Alamos , New Mexico 87545 , United States
| | - Benjamin Nebgen
- Theoretical Division , Los Alamos National Laboratory , Los Alamos , New Mexico 87545 , United States
| | | | - Dmitry Mozyrsky
- Theoretical Division , Los Alamos National Laboratory , Los Alamos , New Mexico 87545 , United States
| | - Adrian E Roitberg
- Department of Chemistry , University of Florida , Gainesville , Florida 32611 , United States
| | - Sergei Tretiak
- Theoretical Division , Los Alamos National Laboratory , Los Alamos , New Mexico 87545 , United States
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20
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Van Wittenberghe S, Alonso L, Malenovský Z, Moreno J. In vivo photoprotection mechanisms observed from leaf spectral absorbance changes showing VIS-NIR slow-induced conformational pigment bed changes. PHOTOSYNTHESIS RESEARCH 2019; 142:283-305. [PMID: 31541418 PMCID: PMC6874624 DOI: 10.1007/s11120-019-00664-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2018] [Accepted: 08/13/2019] [Indexed: 05/29/2023]
Abstract
Regulated heat dissipation under excessive light comprises a complexity of mechanisms, whereby the supramolecular light-harvesting pigment-protein complex (LHC) shifts state from light harvesting towards heat dissipation, quenching the excess of photo-induced excitation energy in a non-photochemical way. Based on whole-leaf spectroscopy measuring upward and downward spectral radiance fluxes, we studied spectrally contiguous (hyperspectral) transient time series of absorbance A(λ,t) and passively induced chlorophyll fluorescence F(λ,t) dynamics of intact leaves in the visible and near-infrared wavelengths (VIS-NIR, 400-800 nm) after sudden strong natural-like illumination exposure. Besides light avoidance mechanism, we observed on absorbance signatures, calculated from simultaneous reflectance R(λ,t) and transmittance T(λ,t) measurements as A(λ,t) = 1 - R(λ,t) - T(λ,t), major dynamic events with specific onsets and kinetical behaviour. A consistent well-known fast carotenoid absorbance feature (500-570 nm) appears within the first seconds to minutes, seen from both the reflected (backscattered) and transmitted (forward scattered) radiance differences. Simultaneous fast Chl features are observed, either as an increased or decreased scattering behaviour during quick light adjustment consistent with re-organizations of the membrane. The carotenoid absorbance feature shows up simultaneously with a major F decrease and corresponds to the xanthophyll conversion, as quick response to the proton gradient build-up. After xanthophyll conversion (t = 3 min), a kinetically slower but major and smooth absorbance increase was occasionally observed from the transmitted radiance measurements as wide peaks in the green (~ 550 nm) and the near-infrared (~ 750 nm) wavelengths, involving no further F quenching. Surprisingly, in relation to the response to high light, this broad and consistent VIS-NIR feature indicates a slowly induced absorbance increase with a sigmoid kinetical behaviour. In analogy to sub-leaf-level observations, we suggest that this mechanism can be explained by a structure-induced low-energy-shifted energy redistribution involving both Car and Chl. These findings might pave the way towards a further non-invasive spectral investigation of antenna conformations and their relations with energy quenching at the intact leaf level, which is, in combination with F measurements, of a high importance for assessing plant photosynthesis in vivo and in addition from remote observations.
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Affiliation(s)
- Shari Van Wittenberghe
- Laboratory of Earth Observation, Image Processing Laboratory, University of Valencia, C/Catedrático José Beltrán, 2, 46980 Paterna, Valencia Spain
- Optics of Photosynthesis Laboratory, Institute for Atmospheric and Earth System Research/Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, 00014 Helsinki, Finland
| | - Luis Alonso
- Laboratory of Earth Observation, Image Processing Laboratory, University of Valencia, C/Catedrático José Beltrán, 2, 46980 Paterna, Valencia Spain
| | - Zbyněk Malenovský
- Geography and Spatial Sciences, School of Technology, Environments and Design, University of Tasmania, Private Bag 76, Hobart, TAS 7001 Australia
| | - José Moreno
- Laboratory of Earth Observation, Image Processing Laboratory, University of Valencia, C/Catedrático José Beltrán, 2, 46980 Paterna, Valencia Spain
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21
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Ko JA, Hwang YS. Effects of nanoTiO 2 on tomato plants under different irradiances. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2019; 255:113141. [PMID: 31541834 DOI: 10.1016/j.envpol.2019.113141] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2019] [Revised: 06/19/2019] [Accepted: 08/29/2019] [Indexed: 06/10/2023]
Abstract
In this study, we investigated the physiological and photochemical influences of nanoTiO2 exposure on tomato plants (Lycopersicum esculentum Mill.). Tomato plants were exposed to 100 mg L-1 of nanoTiO2 for 90 days in a hydroponic system. Light irradiances of 135 and 550 μmolphoton m-2 s-1 were applied as environmental stressors that could affect uptake of nanoTiO2. To quantify nanoTiO2 accumulation in plant bodies and roots, we used transmission electron microscopy, energy-dispersive X-ray spectroscopy, inductively coupled plasma mass spectrometry, and X-ray powder diffraction. Phenotypic and physiological influences such as color change, growth rate, fruit productivity, pigment concentration, and enzyme activity (SOD, CAT, APX) were monitored. We observed numerous effects caused by high irradiance and nanoTiO2 exposure, such as rapid chlorophyll decrease, increased anthocyanin and carotenoid concentrations, high enzymatic activity, and an approximately eight-fold increase in fruit production. Moreover, light absorption in the nanoTiO2-treated tomato plants, as measured by a ultraviolet-visible light spectrometer, increased by a factor of approximately 19, likely due to natural pigments that worked as sensitizers, and this resulted in an ∼120% increase in photochemical activities on A, ФPSII, ФCO2, gsw, and E.
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Affiliation(s)
- Jung Aa Ko
- Environmental Fate & Exposure Research Group, Korea Institute of Toxicology, 17 Jegok-gil, Jinju, 52834, Republic of Korea
| | - Yu Sik Hwang
- Environmental Fate & Exposure Research Group, Korea Institute of Toxicology, 17 Jegok-gil, Jinju, 52834, Republic of Korea.
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22
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Touati M, Bottega S, Ruffini Castiglione M, Sorce C, Béjaoui Z, Spanò C. Modulation of the defence responses against Cd in willow species through a multifaceted analysis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2019; 142:125-136. [PMID: 31279860 DOI: 10.1016/j.plaphy.2019.07.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Revised: 07/01/2019] [Accepted: 07/01/2019] [Indexed: 06/09/2023]
Abstract
Willow, due to the extensive root system, high transpiration rates and ability to accumulate large amounts of cadmium, is considered particularly useful for green remediation practices. In this study two different willow species, Salix viminalis and Salix alba, were used to assess possible differences in their ability of cadmium accumulation and to analyse in detail the physiology of their response to treatments with this metal using a multidisciplinary approach. Plants were grown in hydroponics and treated with 0, 50 and 100 μM Cd2+ (CdCl2) for 7 and 14 days. Cadmium content, oxidative stress, both evaluated by biochemical and histochemical techniques, antioxidant response, leaf stomatal conductance and photosynthetic efficiency were measured in control and treated roots and/or leaves. The two willow species removed cadmium with a high efficiency from the growth solution; however, the highest contents of Cd recorded in plants grown in the presence of the lower Cd concentrations suggest a limited capacity of metal accumulation. No photochemical limitation characterised treated plants, probably due to the ability to store large amounts of Cd in the root compartment, with reduction of damage to the photosynthetic machinery. S. viminalis, able to uptake cadmium also in the root apical region, seemed to be a more efficient accumulator than S. alba and, thanks to a relatively higher antioxidant response, did not show a higher level of oxidative stress. On the basis of the above, the two plant species, in particular S. viminalis, are confirmed as useful for cadmium phytostabilisation/phytoextraction.
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Affiliation(s)
- Mouna Touati
- Faculty of Sciences of Tunis, University of Tunis El Manar, 2092, Tunis, Tunisia; Laboratory of Forest Ecology, National Research Institute of Rural Engineering, Water and Forests Rue Hédi Elkarray, Elmenzah IV, BP 10, 2080, Ariana, Tunisia
| | - Stefania Bottega
- Department of Biology, University of Pisa, Via Luca Ghini 13, 56126, Pisa, Italy
| | | | - Carlo Sorce
- Department of Biology, University of Pisa, Via Luca Ghini 13, 56126, Pisa, Italy
| | - Zoubeir Béjaoui
- Laboratory of Forest Ecology, National Research Institute of Rural Engineering, Water and Forests Rue Hédi Elkarray, Elmenzah IV, BP 10, 2080, Ariana, Tunisia; Faculty of Sciences of Bizerte, University of Carthage, 7021, Jarzouna, Tunisia
| | - Carmelina Spanò
- Department of Biology, University of Pisa, Via Luca Ghini 13, 56126, Pisa, Italy.
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23
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Comparative assessment of salinity tolerance based on physiological and biochemical performances in Ulva australis and Pyropia yezoensis. ALGAL RES 2019. [DOI: 10.1016/j.algal.2019.101590] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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Lalegerie F, Lajili S, Bedoux G, Taupin L, Stiger-Pouvreau V, Connan S. Photo-protective compounds in red macroalgae from Brittany: Considerable diversity in mycosporine-like amino acids (MAAs). MARINE ENVIRONMENTAL RESEARCH 2019; 147:37-48. [PMID: 31014905 DOI: 10.1016/j.marenvres.2019.04.001] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2018] [Revised: 03/29/2019] [Accepted: 04/01/2019] [Indexed: 05/05/2023]
Abstract
To cope with the biotic and abiotic stresses experienced within their environment, marine macroalgae have developed certain defence mechanisms including the synthesis of photo-protective molecules against light and particularly harmful UV radiation. The aim of this study was to screen selected red algae, a highly diverse phylogenetic group, for the production of photo-protective molecules. The pigment content and composition (i.e. chlorophyll-a, phycobiliproteins and carotenoids) and the composition of mycosporine-like amino acids (MAAs) were studied in 40 species of red macroalgae collected in Brittany (France), at two distinct periods (i.e. February and July 2017). A high inter-specific variability was demonstrated in terms of pigment content and MAA composition. Twenty-three potential MAAs were detected by HPLC, and six were identified by LC-MS (i.e. shinorine, palythine, asterina-330, porphyra-334, usurijene and palythene). This is the first study to report on the composition of pigments and MAAs in a diverse group of red seaweeds from Brittany, including some species for which the MAA composition has never been studied before. Nevertheless, the results suggested that some species of red algae are more likely to cope with high levels of light radiation since those species such as Bostrychia scorpioides, Porphyra dioica, Gracilaria vermiculophylla and Vertebrata lanosa are living in environments exposed to higher levels of irradiation, and had various MAAs in addition to their photo-protective pigments.
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Affiliation(s)
- Fanny Lalegerie
- Univ Brest, CNRS, IRD, Ifremer, LEMAR, F-29280, Plouzane, France.
| | - Sirine Lajili
- Univ Brest, CNRS, IRD, Ifremer, LEMAR, F-29280, Plouzane, France
| | - Gilles Bedoux
- Marine Biotechnology and Chemistry Laboratory (LBCM, EA 3884), University of South Brittany (UBS), 56017, Vannes, France
| | - Laure Taupin
- Marine Biotechnology and Chemistry Laboratory (LBCM, EA 3884), University of South Brittany (UBS), 56017, Vannes, France
| | | | - Solène Connan
- Univ Brest, CNRS, IRD, Ifremer, LEMAR, F-29280, Plouzane, France
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25
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Chlorophyll-carotenoid excitation energy transfer and charge transfer in Nannochloropsis oceanica for the regulation of photosynthesis. Proc Natl Acad Sci U S A 2019; 116:3385-3390. [PMID: 30808735 DOI: 10.1073/pnas.1819011116] [Citation(s) in RCA: 65] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Nonphotochemical quenching (NPQ) is a proxy for photoprotective thermal dissipation processes that regulate photosynthetic light harvesting. The identification of NPQ mechanisms and their molecular or physiological triggering factors under in vivo conditions is a matter of controversy. Here, to investigate chlorophyll (Chl)-zeaxanthin (Zea) excitation energy transfer (EET) and charge transfer (CT) as possible NPQ mechanisms, we performed transient absorption (TA) spectroscopy on live cells of the microalga Nannochloropsis oceanica We obtained evidence for the operation of both EET and CT quenching by observing spectral features associated with the Zea S1 and Zea●+ excited-state absorption (ESA) signals, respectively, after Chl excitation. Knockout mutants for genes encoding either violaxanthin de-epoxidase or LHCX1 proteins exhibited strongly inhibited NPQ capabilities and lacked detectable Zea S1 and Zea●+ ESA signals in vivo, which strongly suggests that the accumulation of Zea and active LHCX1 is essential for both EET and CT quenching in N. oceanica.
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26
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Wang S, Bohnsack M, Megow S, Renth F, Temps F. Ultrafast excitation energy transfer in a benzimidazole-naphthopyran donor-acceptor dyad. Phys Chem Chem Phys 2019; 21:2080-2092. [PMID: 30638236 DOI: 10.1039/c8cp05054f] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
The excited-state dynamics of a donor-acceptor dyad composed of 1-propyl-2-pyridinyl-benzimidazole (PPBI) as donor and the photochromic molecular switch diphenylnaphthopyran (DPNP) as acceptor linked via an ester bridge has been investigated by a combination of static and time-resolved spectroscopies and quantum chemical calculations. The UV absorption spectrum of the dyad is virtually identical to the sum of the spectra of its individual constituents, indicating only weak electronic coupling between the donor and acceptor in the electronic ground state. After selective photoexcitation of the PPBI chromophore in the dyad at λpump = 310 nm, however, a fast electronic energy transfer (EET) from the donor to the acceptor is observed, by which the lifetime of the normally long-lived excited state of PPBI is reduced to a few ps. Enabled by the EET, the acceptor switches from its ring-closed naphtopyran form to its ring-opened merocyanine form. The singular value decomposition-based global analyses of the measured femtosecond time-resolved transient absorption spectra of the dyad and its two building blocks as reference compounds allowed us to determine a value for the EET time constant in the dyad of τ = 2.90 ± 0.60 ps. For comparison, Förster theory predicts characteristic FRET times between 1.2 ps ≤ τ ≤ 4.2 ps, in good agreement with the experimental result.
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Affiliation(s)
- Shuangqing Wang
- Institute of Physical Chemistry, Christian-Albrechts-University Kiel, Olshausenstr. 40, 24098 Kiel, Germany.
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Harrison JW, Beecraft L, Smith REH. Implications of irradiance exposure and non-photochemical quenching for multi-wavelength (bbe FluoroProbe) fluorometry. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2018; 189:36-48. [PMID: 30286338 DOI: 10.1016/j.jphotobiol.2018.09.013] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2018] [Revised: 09/12/2018] [Accepted: 09/17/2018] [Indexed: 11/28/2022]
Abstract
Multi-wavelength fluorometers, such as the bbe FluoroProbe (FP), measure excitation spectra of chlorophyll a (Chl-a) fluorescence to infer the abundance and composition of phytoplankton communities as well as the concentration of chromophoric dissolved organic matter (CDOM). Experiments were conducted on laboratory cultures and on natural communities of freshwater phytoplankton to determine how the response of phytoplankton to high irradiance might affect fluorometric estimates of community composition and concentrations of Chl-a and CDOM. Cultures of a representative cyanobacterium, bacillariophyte, synurophyte, cryptophyte, and chlorophyte revealed changes in Chl-a excitation spectra as irradiance was increased to saturating levels and non-photochemical quenching (NPQ) increased. The degree of change and resulting classification error varied among taxa, being strong for the synurophyte and cryptophyte but minimal for the cyanobacterium. Acute-exposure experiments on phytoplankton communities of varying taxonomic composition from five lakes yielded variable results on apparent community composition. There was a consistent decrease in CDOM estimates, whereas Chl-a estimates were generally increased. Subsequent exposure to low PAR relaxed NPQ and tended to reverse the effects of high irradiance on composition, total Chl-a, and CDOM estimates. Relaxation experiments on near-surface communities in a sixth, large lake, Georgian Bay, showed that total Chl-a estimates increased by 44% on average when dark treatments were used to relax NPQ, though, in contrast to the findings from the small lakes, there was little effect on CDOM estimates. We observed a statistically-significant, negative linear relationship between the photon flux density of in situ irradiance and the accuracy of taxonomic assignment by FP in Georgian Bay. Not discounting the correlations between light intensity and the accuracy of the FP that were observed in this study, we conclude that the applicability of the reference spectra to the system under investigation is a more important consideration than variability in natural irradiance conditions.
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Affiliation(s)
- Joel W Harrison
- Department of Biology, University of Waterloo, Waterloo, Ontario, Canada.
| | - Laura Beecraft
- Department of Biology, University of Waterloo, Waterloo, Ontario, Canada
| | - Ralph E H Smith
- Department of Biology, University of Waterloo, Waterloo, Ontario, Canada.
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28
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Feckler A, Rakovic J, Kahlert M, Tröger R, Bundschuh M. Blinded by the light: Increased chlorophyll fluorescence of herbicide-exposed periphyton masks unfavorable structural responses during exposure and recovery. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2018; 203:187-193. [PMID: 30153560 DOI: 10.1016/j.aquatox.2018.08.015] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2018] [Revised: 08/17/2018] [Accepted: 08/17/2018] [Indexed: 06/08/2023]
Abstract
In surface waters within agricultural catchments, periphyton - i.e., biofilms containing algae, heterotrophs, and associated detritus - is subjected to multiple stressors including herbicides. Although herbicide effects on periphyton are frequently studied, the focus has been on photosynthesis-inhibiting herbicides while other modes of toxic action have received little attention. Against this background, a 21-days-lasting bioassay was conducted, during which mature periphytic communities were exposed to the carotenoid-biosynthesis-inhibiting herbicide diflufenican for 12 days (up to 10 μg/L; n = 4), followed by a 9-days-lasting recovery phase in herbicide-free medium. Variables related to periphytic functioning (photosynthetic efficiency and non-photochemical quenching) and structure (pigment concentrations, biomass, and algal community structure) were quantified every third day during both experimental phases. Exposure to ≥ 0.2 μg diflufenican/L resulted in 20-25% and 25-30% lowered carotenoid and chlorophyll a concentrations, respectively, likely explained by a reduced algal biovolume as well as diflufenican's mode of toxic action and thus a shift towards a higher heterotrophy of the communities. Despite these adverse effects on the photosynthetic apparatus, the photosynthetic efficiency increased by up to ∼15% under diflufenican exposure judged on higher chlorophyll fluorescence. This may be explained by an up to ∼60% reduced non-photochemical quenching as well as binding of diflufenican to the pigment-protein membrane complex of the photosystem II, two processes causing higher chlorophyll fluorescence. Additionally, phototrophs may have actively increased energy assimilation to cope with higher energy demands under chemical stress. Although periphyton showed some recovery potential following the exposure phase, observed as increasing chlorophyll a concentrations and non-photochemical quenching, periphyton may not be able to quickly recover from stress given the persistent increase in the photosynthetic efficiency. While the processes underlying the observed effects yet remain speculative, the results suggest a shift towards a higher degree of heterotrophy in periphytic communities ultimately increasing the importance of heterotrophic ecosystem functions at impacted sites over the long term.
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Affiliation(s)
- Alexander Feckler
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Box 7050, SE-750 07 Uppsala, Sweden.
| | - Jelena Rakovic
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Box 7050, SE-750 07 Uppsala, Sweden; Department of Soil and Environment, Swedish University of Agricultural Sciences, Box 7014, SE-750 07 Uppsala, Sweden
| | - Maria Kahlert
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Box 7050, SE-750 07 Uppsala, Sweden
| | - Rikard Tröger
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Box 7050, SE-750 07 Uppsala, Sweden
| | - Mirco Bundschuh
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Box 7050, SE-750 07 Uppsala, Sweden; Institute for Environmental Sciences, University of Koblenz-Landau, Fortstraße 7, D-76829 Landau, Germany.
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29
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Park S, Fischer AL, Steen CJ, Iwai M, Morris JM, Walla PJ, Niyogi KK, Fleming GR. Chlorophyll-Carotenoid Excitation Energy Transfer in High-Light-Exposed Thylakoid Membranes Investigated by Snapshot Transient Absorption Spectroscopy. J Am Chem Soc 2018; 140:11965-11973. [DOI: 10.1021/jacs.8b04844] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Soomin Park
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
| | - Alexandra L. Fischer
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
| | - Collin J. Steen
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
| | - Masakazu Iwai
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720, United States
| | - Jonathan M. Morris
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
| | - Peter Jomo Walla
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
- Department for Biophysical Chemistry, Technische Universität Braunschweig, Institute for Physical and Theoretical Chemistry, Hans-Sommer-Strasse 10, 38106 Braunschweig, Germany
- Department of Neurobiology, Research Group Biomolecular Spectroscopy and Single Molecule Detection, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Göttingen, Germany
| | - Krishna K. Niyogi
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720, United States
| | - Graham R. Fleming
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
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30
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Sangsawang L, Casareto BE, Ohba H, Vu HM, Meekaew A, Suzuki T, Yeemin T, Suzuki Y. 13C and 15N assimilation and organic matter translocation by the endolithic community in the massive coral Porites lutea. ROYAL SOCIETY OPEN SCIENCE 2017; 4:171201. [PMID: 29308251 PMCID: PMC5750018 DOI: 10.1098/rsos.171201] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2017] [Accepted: 11/01/2017] [Indexed: 05/26/2023]
Abstract
Corals evolved by establishing symbiotic relationships with various microorganisms (the zooxanthellae, filamentous algae, cyanobacteria, bacteria, archaea, fungi and viruses), forming the 'coral holobiont'. Among them, the endolithic community is the least studied. Its main function was considered to be translocation of photo-assimilates to the coral host, particularly during bleaching. Here, we hypothesize that (i) endolithic algae may show similar primary production rates in healthy or bleached corals by changing their pigment ratios, and therefore that similar production and translocation of organic matter may occur at both conditions and (ii) diazotrophs are components of the endolithic community; therefore, N2 fixation and translocation of organic nitrogen may occur. We tested these hypotheses in incubation of Porites lutea with 13C and 15N tracers to measure primary production and N2 fixation in coral tissues and endoliths. Assimilation of the 13C atom (%) was observed in healthy and bleached corals when the tracer was injected in the endolithic band, showing translocation in both conditions. N2 fixation was found in coral tissues and endolithic communities with translocation of organic nitrogen. Thus, the endolithic community plays an important role in supporting the C and N metabolism of the holobiont, which may be crucial under changing environmental conditions.
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Affiliation(s)
- Laddawan Sangsawang
- Department of Environment and Energy Systems, Graduate Schools of Science and Technology, Shizuoka University, Shizuoka, Japan
- Marine and Coastal Resources Research and Development Center, the Eastern Gulf of Thailand, Rayong Province, Thailand
| | - Beatriz Estela Casareto
- Department of Environment and Energy Systems, Graduate Schools of Science and Technology, Shizuoka University, Shizuoka, Japan
- Research Institute of Green Science and Technology, Shizuoka University, Shizuoka, Japan
| | - Hideo Ohba
- Department of Environment and Energy Systems, Graduate Schools of Science and Technology, Shizuoka University, Shizuoka, Japan
| | - Hung Manh Vu
- Department of Environment and Energy Systems, Graduate Schools of Science and Technology, Shizuoka University, Shizuoka, Japan
- Institute of Marine Environment and Resources, Vietnam Academy of Science and Technology (VAST), Hanoi, Vietnam
| | - Aussanee Meekaew
- Department of Environment and Energy Systems, Graduate Schools of Science and Technology, Shizuoka University, Shizuoka, Japan
| | - Toshiyuki Suzuki
- Department of Environment and Energy Systems, Graduate Schools of Science and Technology, Shizuoka University, Shizuoka, Japan
| | - Thamasak Yeemin
- Marine Biodiversity Research Group, Faculty of Science, Ramkhamhaeng University, Bangkok, Thailand
| | - Yoshimi Suzuki
- Department of Environment and Energy Systems, Graduate Schools of Science and Technology, Shizuoka University, Shizuoka, Japan
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31
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Selection of robust variables for transfer of classification models employing the successive projections algorithm. Anal Chim Acta 2017; 984:76-85. [DOI: 10.1016/j.aca.2017.07.037] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2017] [Revised: 07/04/2017] [Accepted: 07/17/2017] [Indexed: 11/23/2022]
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32
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Tiwari B, Chakraborty S, Srivastava AK, Mishra AK. Biodegradation and rapid removal of methyl parathion by the paddy field cyanobacterium Fischerella sp. ALGAL RES 2017. [DOI: 10.1016/j.algal.2017.05.024] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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33
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Shahidi R, Yoshida J, Cougnon M, Reheul D, Van Labeke MC. Morpho-physiological responses to dehydration stress of perennial ryegrass and tall fescue genotypes. FUNCTIONAL PLANT BIOLOGY : FPB 2017; 44:612-623. [PMID: 32480592 DOI: 10.1071/fp16365] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2016] [Accepted: 02/24/2017] [Indexed: 06/11/2023]
Abstract
Worldwide drought stress is the most important restriction factor on food and fodder productivity. In this study, morpho-physiological adaptations to dehydration stress were investigated in two tall fescue (Festuca arundinacea Schreb.) genotypes (Fa13 and Fa19 with a high and low sheep grazing preference respectively) and Lolium perenne L. Drought stress as evaluated by decreasing stomatal conductance and chlorophyll content, chlorophyll fluorescence parameters and fructan concentration were first observed in L. perenne (16 days after the start of the drought stress). Furthermore, after 20 days of drought stress the activities of ascorbate peroxide (APX), catalase (CAT), and superoxide dismutase (SOD) were reduced in stressed plants indicating that the capacity to scavenge ROS diminished under severe stress though no differences between genotypes were observed. Osmotic adjustment by carbohydrates did also not differ between the genotypes. Proline, however, reached its highest level in drought-stressed L. perenne followed by Fa13 and Fa19 respectively. The studied species showed a similar degree in response in the traits assessed when plants were exposed to dehydration stress; however changes were first observed in L. perenne.
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Affiliation(s)
- Reihaneh Shahidi
- Department of Plant Production, Ghent University, Coupure Links 653, 9000 Gent, Belgium
| | - Junko Yoshida
- Department of Plant Production, Ghent University, Coupure Links 653, 9000 Gent, Belgium
| | - Mathias Cougnon
- Department of Plant Production, Ghent University, Coupure Links 653, 9000 Gent, Belgium
| | - Dirk Reheul
- Department of Plant Production, Ghent University, Coupure Links 653, 9000 Gent, Belgium
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Athanasopoulos S, Alfonso Hernandez L, Beljonne D, Fernandez-Alberti S, Tretiak S. Ultrafast Non-Förster Intramolecular Donor-Acceptor Excitation Energy Transfer. J Phys Chem Lett 2017; 8:1688-1694. [PMID: 28339205 DOI: 10.1021/acs.jpclett.7b00259] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Ultrafast intramolecular electronic energy transfer in a conjugated donor-acceptor system is simulated using nonadiabatic excited-state molecular dynamics. After initial site-selective photoexcitation of the donor, transition density localization is monitored throughout the S2 → S1 internal conversion process, revealing an efficient unidirectional donor → acceptor energy-transfer process. Detailed analysis of the excited-state trajectories uncovers several salient features of the energy-transfer dynamics. While a weak temperature dependence is observed during the entire electronic energy relaxation, an ultrafast initially temperature-independent process allows the molecular system to approach the S2-S1 potential energy crossing seam within the first ten femtoseconds. Efficient energy transfer occurs in the absence of spectral overlap between the donor and acceptor units and is assisted by a transient delocalization phenomenon of the excited-state wave function acquiring Frenkel-exciton character at the moment of quantum transition.
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Affiliation(s)
- Stavros Athanasopoulos
- Departamento de Física, Universidad Carlos III de Madrid , Avenida Universidad 30, 28911 Leganés, Madrid, Spain
- Experimental Physics II, University of Bayreuth , Bayreuth 95440, Germany
| | | | - David Beljonne
- Laboratory for Chemistry of Novel Materials, University of Mons , Place du Parc 20, B-7000 Mons, Belgium
| | | | - Sergei Tretiak
- Theoretical Division, Center for Nonlinear Studies (CNLS) and Center for integrated Nanotechnologies (CINT), Los Alamos National Laboratory , Los Alamos, New Mexico 87545, United States
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35
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Sandmann G, Mautz J, Breitenbach J. Control of light-dependent keto carotenoid biosynthesis in Nostoc 7120 by the transcription factor NtcA. ACTA ACUST UNITED AC 2017; 71:303-311. [PMID: 27564697 DOI: 10.1515/znc-2016-0117] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2016] [Accepted: 07/19/2016] [Indexed: 11/15/2022]
Abstract
In Nostoc PCC 7120, two different ketolases, CrtW and CrtO are involved in the formation of keto carotenoids from β-carotene. In contrast to other cyanobacteria, CrtW catalyzes the formation of monoketo echinenone whereas CrtO is the only enzyme for the synthesis of diketo canthaxanthin. This is the major photo protective carotenoid in this cyanobacterium. Under high-light conditions, basic canthaxanthin formation was transcriptionally up-regulated. Upon transfer to high light, the transcript levels of all investigated carotenogenic genes including those coding for phytoene synthase, phytoene desaturase and both ketolases were increased. These transcription changes proceeded via binding of the transcription factor NtcA to the promoter regions of the carotenogenic genes. The binding was absolutely dependent on the presence of reductants and oxo-glutarate. Light-stimulated transcript formation was inhibited by DCMU. Therefore, photosynthetic electron transport is proposed as the sensor for high-light and a changing redox state as a signal for NtcA binding.
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Fujii R, Yamano N, Hashimoto H, Misawa N, Ifuku K. Photoprotection vs. Photoinhibition of Photosystem II in Transplastomic Lettuce (Lactuca sativa) Dominantly Accumulating Astaxanthin. PLANT & CELL PHYSIOLOGY 2016; 57:1518-1529. [PMID: 26644463 DOI: 10.1093/pcp/pcv187] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2015] [Accepted: 11/18/2015] [Indexed: 06/05/2023]
Abstract
Transplastomic (chloroplast genome-modified; CGM) lettuce that dominantly accumulates astaxanthin grows similarly to a non-transgenic control with almost no accumulation of naturally occurring photosynthetic carotenoids. In this study, we evaluated the activity and assembly of PSII in CGM lettuce. The maximum quantum yield of PSII in CGM lettuce was <0.6; however, the quantum yield of PSII was comparable with that in control leaves under higher light intensity. CGM lettuce showed a lower ability to induce non-photochemical quenching (NPQ) than the control under various light intensities. The fraction of slowly recovering NPQ in CGM lettuce, which is considered to be photoinhibitory quenching (qI), was less than half that of the control. In fact, 1O2 generation was lower in CGM than in control leaves under high light intensity. CGM lettuce contained less PSII, accumulated mostly as a monomer in thylakoid membranes. The PSII monomers purified from the CGM thylakoids bound echinenone and canthaxanthin in addition to β-carotene, suggesting that a shortage of β-carotene and/or the binding of carbonyl carotenoids would interfere with the photophysical function as well as normal assembly of PSII. In contrast, high accumulation of astaxanthin and other carbonyl carotenoids was found within the thylakoid membranes. This finding would be associated with the suppression of photo-oxidative stress in the thylakoid membranes. Our observation suggests the importance of a specific balance between photoprotection and photoinhibition that can support normal photosynthesis in CGM lettuce producing astaxanthin.
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Affiliation(s)
- Ritsuko Fujii
- The Osaka City University Advanced Research Institute for Natural Science and Technology (OCARINA), Osaka City University, 3-3-138, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585 Japan
- Graduate School of Science, Osaka City University, 3-3-138, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585 Japan
- JST, PRESTO, 4-1-8 Honcho Kawaguchi, Saitama, 332-0012 Japan
| | - Nami Yamano
- Graduate School of Science, Osaka City University, 3-3-138, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585 Japan
| | - Hideki Hashimoto
- The Osaka City University Advanced Research Institute for Natural Science and Technology (OCARINA), Osaka City University, 3-3-138, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585 Japan
- Graduate School of Science, Osaka City University, 3-3-138, Sugimoto, Sumiyoshi-ku, Osaka, 558-8585 Japan
- Present address: Department of Applied Chemistry for Environment, Graduate School of Science and Technology, Kwansei Gakuin University, 2-1 Gakuen, Sanda, Hyogo, 669-1337 Japan
| | - Norihiko Misawa
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi-Shi Ishikawa, 921-8836 Japan
| | - Kentaro Ifuku
- Graduate School of Biostudies, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto, 606-8502 Japan
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Shikata T, Matsunaga S, Kuwahara Y, Iwahori S, Nishiyama Y. Light spectrum regulates cell accumulation during daytime in the raphidophyte Chattonella antiqua causing noxious red tides. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2016; 160:128-33. [DOI: 10.1016/j.jphotobiol.2016.03.046] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2015] [Accepted: 03/29/2016] [Indexed: 11/30/2022]
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Mageney V, Baldermann S, Albach DC. Intraspecific Variation in Carotenoids of Brassica oleracea var. sabellica. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2016; 64:3251-3257. [PMID: 27045759 DOI: 10.1021/acs.jafc.6b00268] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Carotenoids are best known as a source of natural antioxidants. Physiologically, carotenoids are part of the photoprotection in plants as they act as scavengers of reactive oxygen species (ROS). An important source of carotenoids in European food is Brassica oleracea. Focusing on the most abundant carotenoids, we estimated the contents of ß-carotene, (9Z)-neoxanthin, zeaxanthin, and lutein as well as those of chlorophylls a and b to assess their variability in Brassica oleracea var. sabellica. Our analyses included more than 30 cultivars categorized in five distinct sets grouped according to morphological characteristics or geographical origin. Our results demonstrated specific carotenoid patterns characteristic for American, Italian, and red-colored kale cultivars. Moreover, we demonstrated a tendency of high zeaxanthin proportions under traditional harvest conditions, which accord to low-temperature regimes. We also compared the carotenoid patterns of self-generated hybrid lines. Corresponding findings indicated that crossbreeding has a high potential for carotenoid content optimization in kale.
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Affiliation(s)
- Vera Mageney
- Institute of Biology and Environmental Sciences, Carl von Ossietzky University , Oldenburg Carl von Ossietzky Str. 9-11, 26129 Oldenburg, Germany
| | - Susanne Baldermann
- Leibniz-Institute of Vegetables and Ornamental Crops Grossbeeren/Erfurt e. V. , Theodor-Echtermeyer-Weg 1, 14979 Grossbeeren, Germany
- Institute of Nutritional Science, University of Potsdam , Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany
| | - Dirk C Albach
- Institute of Biology and Environmental Sciences, Carl von Ossietzky University , Oldenburg Carl von Ossietzky Str. 9-11, 26129 Oldenburg, Germany
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Paliwal C, Ghosh T, George B, Pancha I, Maurya R, Chokshi K, Ghosh A, Mishra S. Microalgal carotenoids: Potential nutraceutical compounds with chemotaxonomic importance. ALGAL RES 2016. [DOI: 10.1016/j.algal.2016.01.017] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Fréchette E, Chang CYY, Ensminger I. Photoperiod and temperature constraints on the relationship between the photochemical reflectance index and the light use efficiency of photosynthesis in Pinus strobus. TREE PHYSIOLOGY 2016; 36:311-24. [PMID: 26846980 PMCID: PMC4885948 DOI: 10.1093/treephys/tpv143] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2015] [Accepted: 12/16/2015] [Indexed: 05/14/2023]
Abstract
The photochemical reflectance index (PRI) is a proxy for the activity of the photoprotective xanthophyll cycle and photosynthetic light use efficiency (LUE) in plants. Evergreen conifers downregulate photosynthesis in autumn in response to low temperature and shorter photoperiod, and the dynamic xanthophyll cycle-mediated non-photochemical quenching (NPQ) is replaced by sustained NPQ. We hypothesized that this shift in xanthophyll cycle-dependent energy partitioning during the autumn is the cause for variations in the PRI-LUE relationship. In order to test our hypothesis, we characterized energy partitioning and pigment composition during a simulated summer-autumn transition in a conifer and assessed the effects of temperature and photoperiod on the PRI-LUE relationship. We measured gas exchange, chlorophyll fluorescence and leaf reflectance during the photosynthetic downregulation in Pinus strobus L. seedlings exposed to low temperature/short photoperiod or elevated temperature/short photoperiod conditions. Shifts in energy partitioning during simulated autumn were observed when the pools of chlorophylls decreased and pools of photoprotective carotenoids increased. On a seasonal timescale, PRI was controlled by carotenoid pool sizes rather than xanthophyll cycle dynamics. Photochemical reflectance index variation under cold autumn conditions mainly reflected long-term pigment pool adjustments associated with sustained NPQ, which impaired the PRI-LUE relationship. Exposure to warm autumn conditions prevented the induction of sustained NPQ but still impaired the PRI-LUE relationship. We therefore conclude that alternative zeaxanthin-independent NPQ mechanisms, which remain undetected by the PRI, are present under both cold and warm autumn conditions, contributing to the discrepancy in the PRI-LUE relationship during autumn.
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Affiliation(s)
- Emmanuelle Fréchette
- Department of Biology, University of Toronto at Mississauga, Mississauga, ON, Canada L5L 1C6 Graduate Department of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada M5S 1A1
| | - Christine Yao-Yun Chang
- Department of Biology, University of Toronto at Mississauga, Mississauga, ON, Canada L5L 1C6 Graduate Department of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada M5S 1A1
| | - Ingo Ensminger
- Department of Biology, University of Toronto at Mississauga, Mississauga, ON, Canada L5L 1C6 Graduate Department of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada M5S 1A1 Graduate Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada M5S 3B2
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Burdiak P, Rusaczonek A, Witoń D, Głów D, Karpiński S. Cysteine-rich receptor-like kinase CRK5 as a regulator of growth, development, and ultraviolet radiation responses in Arabidopsis thaliana. JOURNAL OF EXPERIMENTAL BOTANY 2015; 66:3325-37. [PMID: 25969551 PMCID: PMC4449547 DOI: 10.1093/jxb/erv143] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
In plants, receptor-like protein kinases play essential roles in signal transduction by recognizing extracellular stimuli and activating the downstream signalling pathways. Cysteine-rich receptor-like kinases (CRKs) constitute a large subfamily of receptor-like protein kinases, with 44 members in Arabidopsis thaliana. They are distinguished by the novel C-X8-C-X2-C motif (DUF26) in the extracellular domains. One of them, CRK5, is an important component of the biochemical machinery involved in the regulation of essential physiological processes. Functional characterization of crk5 mutant plants showed their clear phenotype, manifested by impaired stomatal conductance and accelerated senescence. This phenotype correlated with accumulation of reactive oxygen species, higher foliar levels of ethylene and salicylic acid, and increased transcript abundance for genes associated with signalling pathways corresponding to these hormones. Moreover, the crk5 plants displayed enhanced cell death and oxidative damage in response to ultraviolet radiation. Complementation of CRK5 mutation managed to recover the wild-type phenotype, indicating an essential role of this gene in the regulation of growth, development, and acclimatory responses.
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Affiliation(s)
- Paweł Burdiak
- Department of Plant Genetics, Breeding and Biotechnology, Faculty of Horticulture, Biotechnology and Landscape Architecture, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Anna Rusaczonek
- Department of Plant Genetics, Breeding and Biotechnology, Faculty of Horticulture, Biotechnology and Landscape Architecture, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Damian Witoń
- Department of Plant Genetics, Breeding and Biotechnology, Faculty of Horticulture, Biotechnology and Landscape Architecture, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Dawid Głów
- Department of Plant Genetics, Breeding and Biotechnology, Faculty of Horticulture, Biotechnology and Landscape Architecture, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Stanisław Karpiński
- Department of Plant Genetics, Breeding and Biotechnology, Faculty of Horticulture, Biotechnology and Landscape Architecture, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
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Holleboom CP, Gacek DA, Liao PN, Negretti M, Croce R, Walla PJ. Carotenoid-chlorophyll coupling and fluorescence quenching in aggregated minor PSII proteins CP24 and CP29. PHOTOSYNTHESIS RESEARCH 2015; 124:171-180. [PMID: 25744389 DOI: 10.1007/s11120-015-0113-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2014] [Accepted: 02/25/2015] [Indexed: 05/28/2023]
Abstract
It is known that aggregation of isolated light-harvesting complex II (LHCII) in solution results in high fluorescence quenching, reduced chlorophyll fluorescence lifetime, and increased electronic coupling of carotenoid (Car) S1 and chlorophyll (Chl) Qy states, as determined by two-photon studies. It has been suggested that this behavior of aggregated LHCII mimics aspects of non-photochemical quenching processes of higher plants and algae. However, several studies proposed that the minor photosystem II proteins CP24 and CP29 also play a significant role in regulation of photosynthesis. Therefore, we use a simple protocol that allows gradual aggregation also of CP24 and CP29. Similarly, as observed for LHCII, aggregation of CP24 and CP29 also leads to increasing fluorescence quenching and increasing electronic Car S1-Chl Qy coupling. Furthermore, a direct comparison of the three proteins revealed a significant higher electronic coupling in the two minor proteins already in the absence of any aggregation. These differences become even more prominent upon aggregation. A red-shift of the Qy absorption band known from LHCII aggregation was also observed for CP29 but not for CP24. We discuss possible implications of these results for the role of CP24 and CP29 as potential valves for excess excitation energy in the regulation of photosynthetic light harvesting.
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Affiliation(s)
- Christoph-Peter Holleboom
- Department for Biophysical Chemistry, Institute for Physical and Theoretical Chemistry, Technische Universität Braunschweig, Hans-Sommer-Str. 10, 38106, Braunschweig, Germany
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Kusama Y, Inoue S, Jimbo H, Takaichi S, Sonoike K, Hihara Y, Nishiyama Y. Zeaxanthin and Echinenone Protect the Repair of Photosystem II from Inhibition by Singlet Oxygen in Synechocystis sp. PCC 6803. PLANT & CELL PHYSIOLOGY 2015; 56:906-16. [PMID: 25663484 DOI: 10.1093/pcp/pcv018] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2014] [Accepted: 01/30/2015] [Indexed: 05/15/2023]
Abstract
Carotenoids are important components of antioxidative systems in photosynthetic organisms. We investigated the roles of zeaxanthin and echinenone in the protection of PSII from photoinhibition in Synechocystis sp. PCC 6803, using mutants of the cyanobacterium that lack these carotenoids. The activity of PSII in mutant cells deficient in either zeaxanthin or echinenone was more sensitive to strong light than the activity in wild-type cells, and the activity in mutant cells deficient in both carotenoids was hypersensitive to strong light, indicating that the absence of these carotenoids increased the extent of photoinhibition. Nonetheless, the rate of photodamage to PSII, as measured in the presence of chloramphenicol, which blocks the repair of PSII, was unaffected by the absence of either carotenoid, suggesting that these carotenoids might act by protecting the repair of PSII. Knockout of the gene for the so-called orange carotenoid protein (OCP), in which the 3'-hydroxyechinenone cofactor, a derivative of echinenone, is responsible for the thermal dissipation of excitation energy, increased the extent of photoinhibition but did not affect photodamage, suggesting that thermal dissipation also protects the repair of PSII. In mutant cells lacking OCP, as well as those lacking zeaxanthin and echinenone, the production of singlet oxygen was stimulated and the synthesis de novo of various proteins, including the D1 protein, was markedly suppressed under strong light. These observations suggest that the carotenoids and thermal dissipation might protect the repair of photodamaged PSII by depressing the levels of singlet oxygen that inhibits protein synthesis.
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Affiliation(s)
- Yuri Kusama
- Department of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570 Japan
| | - Shuhei Inoue
- Department of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570 Japan
| | - Haruhiko Jimbo
- Department of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570 Japan
| | - Shinichi Takaichi
- Department of Biology, Nippon Medical School, Kyonan-cho, Musashino, Tokyo, 180-0023 Japan
| | - Kintake Sonoike
- Faculty of Education and Integrated Arts and Sciences, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, 162-8480 Japan
| | - Yukako Hihara
- Department of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570 Japan Institute for Environmental Science and Technology, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570 Japan
| | - Yoshitaka Nishiyama
- Department of Biochemistry and Molecular Biology, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570 Japan Institute for Environmental Science and Technology, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama, 338-8570 Japan
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Tu VA, Kaga A, Gericke KH, Watanabe N, Narumi T, Toda M, Brueckner B, Baldermann S, Mase N. Synthesis and Characterization of Quantum Dot Nanoparticles Bound to the Plant Volatile Precursor of Hydroxy-apo-10′-carotenal. J Org Chem 2014; 79:6808-15. [DOI: 10.1021/jo500605c] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Vo Anh Tu
- Department
of Applied Chemistry and Biochemical Engineering, Graduate School
of Engineering, and Green Energy Research Division, Research Institute
of Green Science and Technology, Shizuoka University, 3-5-1 Johoku, Hamamatsu, Shizuoka 432-8561, Japan
| | - Atsushi Kaga
- Department
of Applied Chemistry and Biochemical Engineering, Graduate School
of Engineering, and Green Energy Research Division, Research Institute
of Green Science and Technology, Shizuoka University, 3-5-1 Johoku, Hamamatsu, Shizuoka 432-8561, Japan
| | - Karl-Heinz Gericke
- Institute
for Physical and Theoretical Chemistry, University of Technology, Braunschweig, Hans-Sommer-Strasse 10, D-38106, Braunschweig, Germany
| | - Naoharu Watanabe
- Department
of Applied Chemistry and Biochemical Engineering, Graduate School
of Engineering, and Green Energy Research Division, Research Institute
of Green Science and Technology, Shizuoka University, 3-5-1 Johoku, Hamamatsu, Shizuoka 432-8561, Japan
- Graduate
School of Science and Technology, Shizuoka University, Shizuoka, 432-8561 Japan
| | - Tetsuo Narumi
- Department
of Applied Chemistry and Biochemical Engineering, Graduate School
of Engineering, and Green Energy Research Division, Research Institute
of Green Science and Technology, Shizuoka University, 3-5-1 Johoku, Hamamatsu, Shizuoka 432-8561, Japan
| | - Mitsuo Toda
- Department
of Applied Chemistry and Biochemical Engineering, Graduate School
of Engineering, and Green Energy Research Division, Research Institute
of Green Science and Technology, Shizuoka University, 3-5-1 Johoku, Hamamatsu, Shizuoka 432-8561, Japan
| | - Bernhard Brueckner
- Leibniz-Institute of Vegetable and Ornamental Crops Großbeeren/Erfurt e.V., Theodor-Echternmeyer-Weg 1, 14979 Großbeeren, Germany
| | - Susanne Baldermann
- Leibniz-Institute of Vegetable and Ornamental Crops Großbeeren/Erfurt e.V., Theodor-Echternmeyer-Weg 1, 14979 Großbeeren, Germany
- Institute
of Nutritional Science, University of Potsdam, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany
| | - Nobuyuki Mase
- Department
of Applied Chemistry and Biochemical Engineering, Graduate School
of Engineering, and Green Energy Research Division, Research Institute
of Green Science and Technology, Shizuoka University, 3-5-1 Johoku, Hamamatsu, Shizuoka 432-8561, Japan
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Alsharafa K, Vogel MO, Oelze ML, Moore M, Stingl N, König K, Friedman H, Mueller MJ, Dietz KJ. Kinetics of retrograde signalling initiation in the high light response of Arabidopsis thaliana. Philos Trans R Soc Lond B Biol Sci 2014; 369:20130424. [PMID: 24591725 DOI: 10.1098/rstb.2013.0424] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
High light acclimation depends on retrograde control of nuclear gene expression. Retrograde regulation uses multiple signalling pathways and thus exploits signal patterns. To maximally challenge the acclimation system, Arabidopsis thaliana plants were either adapted to 8 (low light (L-light)) or 80 µmol quanta m(-2) s(-1) (normal light (N-light)) and subsequently exposed to a 100- and 10-fold light intensity increase, respectively, to high light (H-light, 800 µmol quanta m(-2) s(-1)), for up to 6 h. Both L → H- and N → H-light plants efficiently regulated CO2 assimilation to a constant level without apparent damage and inhibition. This experimental set-up was scrutinized for time-dependent regulation and efficiency of adjustment. Transcriptome profiles revealed that N-light and L-light plants differentially accumulated 2119 transcripts. After 6 h in H-light, only 205 remained differently regulated between the L → H- and N → H-light plants, indicating efficient regulation allowing the plants to reach a similar transcriptome state. Time-dependent analysis of transcripts as markers for signalling pathways, and of metabolites and hormones as possibly involved transmitters, suggests that oxylipins such as oxophytodienoic acid and jasmonic acid, metabolites and redox cues predominantly control the acclimation response, whereas abscisic acid, salicylic acid and auxins play an insignificant or minor role.
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Affiliation(s)
- Khalid Alsharafa
- Biochemistry and Physiology of Plants, Bielefeld University, , Bielefeld 33501, Germany
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Tarakowski R, Malanowski A, Kościesza R, Siegoczyński R. VIS spectroscopy and pressure induced phase transitions – Chasing the olive oils quality. J FOOD ENG 2014. [DOI: 10.1016/j.jfoodeng.2013.08.030] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Pavlovich VS. Gas-phase energy of the S2←S0 transition and electrostatic properties of the S2 state of carotenoid peridinin via a solvatochromic shift and orientation broadening of the absorption spectrum. Photochem Photobiol Sci 2014; 13:1444-55. [DOI: 10.1039/c4pp00124a] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The solvent effect on the position and the shape of the absorption spectrum of peridinin for 12 protic and aprotic solvents as well as the temperature effect for methanol were studied using a solvatochromic theory based on the Onsager sphere cavity model.
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Affiliation(s)
- Vladimir S. Pavlovich
- Division of Higher Mathematics and Physics
- Military Academy of Belarus
- Minsk 220057, Belarus
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SILVA ILCAPDEFE, JUNIOR JOSUÉFDAS, PUTTI FERNANDOF, LATORRE DEBORADEO, SCHIMIDT ANAP, LUDWIG RAFAEL. HERBICIDAS INIBIDORES DO FOTOSSISTEMA II – PARTE I. REVISTA BRASILEIRA DE ENGENHARIA DE BIOSSISTEMAS 2013. [DOI: 10.18011/bioeng2013v7n1p1-11] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022] Open
Abstract
O controle químico tem sido o mais utilizado em grandes áreas de plantio, principalmente por ser um método rápido e eficiente. Os herbicidas inibidores do fotossistema II (PSII) são fundamentais para o manejo integrado de plantas daninhas e práticas conservacionista de solo. A aplicação é realizada em pré-emergência ou pós-emergência inicial das plantas daninhas. A absorção é pelas raízes, tendo como barreira as estrias de Caspari, sendo a translocação realizada pelo xilema. O processo de absorção e translocação também são dependentes das próprias características do produto, como as propriedades lipofílicas e hidrofílicas, as quais podem ser medidas através do coeficiente de partição octanol-água (Kow). A inibição da fotossíntese acontece pela ligação dos herbicidas deste grupo ao sítio de ligação da QB, na proteína D1 do fotossistema II, o qual se localiza na membrana dos tilacóides dos cloroplastos, causando, o bloqueia do transporte de elétrons da QA para QB, interrompendo a fixação do CO2 e a produção de ATP e NAPH2.
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Affiliation(s)
- ILCA P. DE F. E SILVA
- Mestre e Doutoranda em Agronomia – Agricultura – Faculdade de Ciências Agronômicas, UNESP. Rua José Barbosa de Barros, nº 1780, Jd. Paraíso, CEP. 18.610-307 - Botucatu, SP
| | - JOSUÉ F. DA S. JUNIOR
- Mestre e Doutorando em Agronomia - Irrigação e Drenagem-Faculdade de Ciências Agronômicas, UNESP
| | - FERNANDO F. PUTTI
- Mestre e Doutorando em Agronomia - Irrigação e Drenagem-Faculdade de Ciências Agronômicas, UNESP
| | - DEBORA DE O. LATORRE
- Mestre e Doutoranda em Agronomia – Agricultura – Faculdade de Ciências Agronômicas, UNESP
| | - ANA P. SCHIMIDT
- Mestre e Doutorando em Agronomia - Irrigação e Drenagem-Faculdade de Ciências Agronômicas, UNESP
| | - RAFAEL LUDWIG
- Mestre e Doutorando em Agronomia - Irrigação e Drenagem-Faculdade de Ciências Agronômicas, UNESP
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Sytar O, Kumar A, Latowski D, Kuczynska P, Strzałka K, Prasad MNV. Heavy metal-induced oxidative damage, defense reactions, and detoxification mechanisms in plants. ACTA PHYSIOLOGIAE PLANTARUM 2013. [PMID: 0 DOI: 10.1007/s11738-012-1169-6] [Citation(s) in RCA: 249] [Impact Index Per Article: 22.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
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Behrendt L, Staal M, Cristescu SM, Harren FJ, Schliep M, Larkum AW, Kühl M. Reactive oxygen production induced by near-infrared radiation in three strains of the Chl d-containing cyanobacterium Acaryochloris marina. F1000Res 2013; 2:44. [PMID: 24555034 PMCID: PMC3894803 DOI: 10.12688/f1000research.2-44.v2] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 03/10/2013] [Indexed: 11/20/2022] Open
Abstract
Cyanobacteria in the genus
Acaryochloris have largely exchanged Chl
a with Chl
d, enabling them to harvest near-infrared-radiation (NIR) for oxygenic photosynthesis, a biochemical pathway prone to generate reactive oxygen species (ROS). In this study, ROS production under different light conditions was quantified in three
Acaryochloris strains (MBIC11017, HICR111A and the novel strain CRS) using a real-time ethylene detector in conjunction with addition of 2-keto-4-thiomethylbutyric acid, a substrate that is converted to ethylene when reacting with certain types of ROS. In all strains, NIR was found to generate less ROS than visible light (VIS). More ROS was generated if strains MBIC11017 and HICR111A were adapted to NIR and then exposed to VIS, while strain CRS demonstrated the opposite behavior. This is the very first study of ROS generation and suggests that
Acaryochloris can avoid a considerable amount of light-induced stress by using NIR instead of VIS for its photosynthesis, adding further evolutionary arguments to their widespread appearance.
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Affiliation(s)
- Lars Behrendt
- Marine Biology Section, Department of Biology, University of Copenhagen, Helsingør, DK-3000, Denmark ; Section for Microbiology, Department of Biology, University of Copenhagen, Sølvgade, DK-1307, Denmark
| | - Marc Staal
- Marine Biology Section, Department of Biology, University of Copenhagen, Helsingør, DK-3000, Denmark
| | - Simona M Cristescu
- Life Science Trace Gas Facility, Radboud University Nijmegen, Heyendaalseweg, 6525 AJ, Netherlands
| | - Frans Jm Harren
- Life Science Trace Gas Facility, Radboud University Nijmegen, Heyendaalseweg, 6525 AJ, Netherlands
| | - Martin Schliep
- Plant Functional Biology and Climate Change Cluster, School of the Environment, University of Technology Sydney, Sydney, NSW 2007, Australia
| | - Anthony Wd Larkum
- Plant Functional Biology and Climate Change Cluster, School of the Environment, University of Technology Sydney, Sydney, NSW 2007, Australia
| | - Michael Kühl
- Marine Biology Section, Department of Biology, University of Copenhagen, Helsingør, DK-3000, Denmark ; Plant Functional Biology and Climate Change Cluster, School of the Environment, University of Technology Sydney, Sydney, NSW 2007, Australia ; Singapore Centre on Environmental Life Sciences Engineering, School of Biological Sciences, Nanyang Technological University, Nanyang, Singapore
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