1
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Branson J, Smith PW, Sergentu DC, Russo DR, Gupta H, Booth CH, Arnold J, Schelter EJ, Autschbach J, Minasian SG. The Counterintuitive Relationship between Orbital Energy, Orbital Overlap, and Bond Covalency in CeF 62- and CeCl 62. J Am Chem Soc 2024; 146:25640-25655. [PMID: 39241121 PMCID: PMC11421006 DOI: 10.1021/jacs.4c07459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2024] [Revised: 08/20/2024] [Accepted: 08/21/2024] [Indexed: 09/08/2024]
Abstract
The 4f orbitals of Ce(IV) have shown appreciably enhanced covalent mixing with ligand orbitals relative to those of Ce(III). Here, X-ray spectroscopy, magnetic susceptibility measurements, and theoretical methods are used to investigate 4f covalency in CeF62- and CeCl62-. These techniques show covalent mixing between Ce 4f and F 2p orbitals to be about 25% less than mixing between Ce 4f and Cl 3p orbitals, placing CeF62- among the most ionic Ce(IV) compounds to-date. However, ligand field analysis using the experimental data shows significantly higher 4f orbital overlap with the F 2p orbitals compared to the Cl 3p. This result is counterintuitive since the Ce-F bonds display less 4f covalency despite their higher orbital overlap, and greater overlap is traditionally associated with enhanced bond covalency. The weaker covalency is attributed to the large energy gap between Ce 4f and F 2p orbitals strongly counteracting the higher orbital overlap. These results highlight that only a concerted consideration of both atomic orbital overlap and energy matching in f-element systems leads to an accurate picture of their bonding.
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Affiliation(s)
- Jacob
A. Branson
- Department
of Chemistry, University of California,
Berkeley, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Patrick W. Smith
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Dumitru-Claudiu Sergentu
- RA-03
(RECENT AIR) Laboratory, Alexandru Ioan
Cuza University of Iaşi, Iaşi 700506, Romania
- Faculty
of Chemistry, Alexandru Ioan Cuza University
of Iaşi, Iaşi 700506, Romania
| | - Dominic R. Russo
- Department
of Chemistry, University of California,
Berkeley, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Himanshu Gupta
- P. Roy and
Diana T. Vagelos Laboratories, Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States
| | - Corwin H. Booth
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - John Arnold
- Department
of Chemistry, University of California,
Berkeley, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Eric J. Schelter
- P. Roy and
Diana T. Vagelos Laboratories, Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States
| | - Jochen Autschbach
- Department
of Chemistry, University at Buffalo, State
University of New York, Buffalo, New York 14260, United States
| | - Stefan G. Minasian
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
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2
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Fu H, Liu H, Wang X, Zhang W, Zhang H, Luo Y, Deng X, King G, Chen N, Wang L, Wu YA. Reverse Hydrogen Spillover on Metal Oxides for Water-Promoted Catalytic Oxidation Reactions. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2024; 36:e2407534. [PMID: 38973643 DOI: 10.1002/adma.202407534] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2024] [Revised: 06/25/2024] [Indexed: 07/09/2024]
Abstract
Understanding the water-involved mechanism on metal oxide surface and the dynamic interaction of water with active sites is crucial in solving water poisoning in catalytic reactions. Herein, this work solves this problem by designing the water-promoted function of metal oxides in the ethanol oxidation reaction. In situ multimodal spectroscopies unveil that the competitive adsorption of water-dissociated *OH species with O2 at Sn active sites results in water poisoning and the sluggish proton transfer in CoO-SnO2 imparts water-resistant effect. Carbon material as electron donor and proton transport channel optimizes the Co active sites and expedites the reverse hydrogen spillover from CoO to SnO2. The water-promoted function arises from spillover protons facilitating O2 activation on the SnO2 surface, leading to crucial *OOH intermediate formation for catalyzing C-H and C-C cleavage. Consequently, the tailored CoO-C-SnO2 showcases a remarkable 60-fold enhancement in ethanol oxidation reaction compared to bare SnO2 under high-humidity conditions.
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Affiliation(s)
- Hao Fu
- School of Chemistry and Chemical Engineering, Guangxi Laboratory on the Study of Coral Reefs in the South China Sea, Coral Reef Research Center of China, School of Marine Sciences, Guangxi University, Nanning, 530004, P. R. China
| | - Hongjie Liu
- School of Chemistry and Chemical Engineering, Guangxi Laboratory on the Study of Coral Reefs in the South China Sea, Coral Reef Research Center of China, School of Marine Sciences, Guangxi University, Nanning, 530004, P. R. China
| | - Xiyang Wang
- Department of Mechanical and Mechatronics Engineering, Waterloo Institute for Nanotechnology, Materials Interface Foundry, University of Waterloo, Waterloo, N2L 3G1, Canada
| | - Wenhua Zhang
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, 230029, P. R. China
| | - Hui Zhang
- State Key Laboratory of Functional Materials for Informatics, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai, 200050, P. R. China
- Shanghai Synchrotron Radiation Facility, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, 201204, P. R. China
| | - Yunhong Luo
- School of Physical Science and Technology, Shanghai Tech University, Shanghai, 201210, P. R. China
| | - Xianwang Deng
- School of Chemistry and Chemical Engineering, Guangxi Laboratory on the Study of Coral Reefs in the South China Sea, Coral Reef Research Center of China, School of Marine Sciences, Guangxi University, Nanning, 530004, P. R. China
| | - Graham King
- Canadian Light Source, Saskatoon, S7N 2V3, Canada
| | - Ning Chen
- Canadian Light Source, Saskatoon, S7N 2V3, Canada
| | - Liwei Wang
- School of Chemistry and Chemical Engineering, Guangxi Laboratory on the Study of Coral Reefs in the South China Sea, Coral Reef Research Center of China, School of Marine Sciences, Guangxi University, Nanning, 530004, P. R. China
| | - Yimin A Wu
- Department of Mechanical and Mechatronics Engineering, Waterloo Institute for Nanotechnology, Materials Interface Foundry, University of Waterloo, Waterloo, N2L 3G1, Canada
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3
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Branson JA, Smith PW, Arnold J, Minasian SG. Analyzing the Intensities of K-Edge Transitions in X 2 Molecules (X = F, Cl, Br) for Use in Ligand K-Edge X-ray Absorption Spectroscopy. Inorg Chem 2024; 63:15557-15562. [PMID: 39112430 DOI: 10.1021/acs.inorgchem.4c01666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/27/2024]
Abstract
Ligand K-edge X-ray absorption spectroscopy (XAS) is regularly used to determine the ligand contribution to metal-ligand bonds. For quantitative studies, the pre-edge transition intensities must be referenced to an intensity standard, and pre-edge intensities obtained from different ligand atoms cannot be compared without standardization due to different cross sections at each absorption edge. In this work, the intensities of the 1s → σ* transitions in F2, Cl2, and Br2 are analyzed for their use as references for ligand K-edge XAS. We show that the intensities of these transitions are equal to the intensities of the 1s → np transitions in the unbound halogens. This finding is supported by a comparison between the normalized experimental intensities for the molecules and the calculated oscillator strengths for the atoms. These results highlight the potential for these molecules to be used as intensity standards in F, Cl, and Br K-edge XAS experiments.
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Affiliation(s)
- Jacob A Branson
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory (LBNL), Berkeley, California 94720, United States
| | - Patrick W Smith
- Chemical Sciences Division, Lawrence Berkeley National Laboratory (LBNL), Berkeley, California 94720, United States
| | - John Arnold
- Department of Chemistry, University of California, Berkeley, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory (LBNL), Berkeley, California 94720, United States
| | - Stefan G Minasian
- Chemical Sciences Division, Lawrence Berkeley National Laboratory (LBNL), Berkeley, California 94720, United States
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4
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Gunther SO, Qiao Y, Smith PW, Ciccone SR, Ditter AS, Huh DN, Moreau LM, Shuh DK, Sun T, Arnold PL, Booth CH, de Jong WA, Evans WJ, Lukens WW, Minasian SG. 4f-Orbital mixing increases the magnetic susceptibility of Cp' 3Eu. Chem Sci 2024; 15:12667-12675. [PMID: 39148767 PMCID: PMC11322928 DOI: 10.1039/d4sc01300j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2024] [Accepted: 06/05/2024] [Indexed: 08/17/2024] Open
Abstract
Traditional models of lanthanide electronic structure suggest that bonding is predominantly ionic, and that covalent orbital mixing is not an important factor in determining magnetic properties. Here, 4f orbital mixing and its impact on the magnetic susceptibility of Cp'3Eu (Cp' = C5H4SiMe3) was analyzed experimentally using magnetometry and X-ray absorption spectroscopy (XAS) methods at the C K-, Eu M5,4-, and L3-edges. Pre-edge features in the experimental and TDDFT-calculated C K-edge XAS spectra provided unequivocal evidence of C 2p and Eu 4f orbital mixing in the π-antibonding orbital of a' symmetry. The charge-transfer configurations resulting from 4f orbital mixing were identified spectroscopically by using Eu M5,4-edge and L3-edge XAS. Modeling of variable-temperature magnetic susceptibility data showed excellent agreement with the XAS results and indicated that increased magnetic susceptibility of Cp'3Eu is due to removal of the degeneracy of the 7F1 excited state due to mixing between the ligand and Eu 4f orbitals.
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Affiliation(s)
- S Olivia Gunther
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
| | - Yusen Qiao
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
| | - Patrick W Smith
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
| | - Sierra R Ciccone
- Department of Chemistry, University of California Irvine CA 92697 USA
| | - Alexander S Ditter
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
| | - Daniel N Huh
- Department of Chemistry, University of California Irvine CA 92697 USA
| | - Liane M Moreau
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
- Department of Chemistry, Washington State University Pullman WA 99164 USA
| | - David K Shuh
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
| | - Taoxiang Sun
- Institute of Nuclear and New Energy Technology, Tsinghua University Beijing 100084 P. R. China
| | - Polly L Arnold
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
- Department of Chemistry, University of California Berkeley CA 94720 USA
| | - Corwin H Booth
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
| | - Wibe A de Jong
- Computational Research Division, Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
| | - William J Evans
- Department of Chemistry, University of California Irvine CA 92697 USA
| | - Wayne W Lukens
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
| | - Stefan G Minasian
- Chemical Sciences Division, Lawrence, Berkeley National Laboratory Berkeley CA 94720 USA
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5
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Zhang Y, Duan W, Yang Y, Zhao Z, Ren G, Zhang N, Zheng L, Chen J, Wang J, Sun T. Are 4f-Orbitals Engaged in Covalent Bonding Between Lanthanides and Triphenylphosphine Oxide? An Oxygen K-Edge X-ray Absorption Spectroscopy and Density Functional Theory Study. Inorg Chem 2024; 63:2597-2605. [PMID: 38266171 DOI: 10.1021/acs.inorgchem.3c03834] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2024]
Abstract
The bonding covalency between trivalent lanthanides (Ln = La, Pr, Nd, Eu, Gd) and triphenylphosphine oxide (TPPO) is studied by X-ray absorption spectra (XAS) and density functional theory (DFT) calculations on the LnCl3(TPPO)3 complexes. The O, P, and Cl K-edge XAS for the single crystals of LnCl3(TPPO)3 were collected, and the spectra were interpreted based on DFT calculations. The O and P K-edge XAS spectra showed no significant change across the Ln series in the LnCl3(TPPO)3 complexes, unlike the Cl K-edge XAS spectra. The experimental O K-edge XAS spectra suggest no mixing between the Ln 4f- and the O 2p-orbitals in the LnCl3(TPPO)3 complexes. DFT calculations indicate that the amount of the O 2p character per Ln-O bond is less than 0.1% in the Ln 4f-based orbitals in all of the LnCl3(TPPO)3 complexes. The experimental spectra and theoretical calculations demonstrate that Ln 4f-orbitals are not engaged in the covalent bonding of lanthanides with TPPO, which contrasts the involvement of U 5f-orbitals in covalent bonding in the UO2Cl2(TPPO)2 complex. Results in this work reinforce our previous speculation that bonding covalency is potentially responsible for the extractability of monodentate organophosphorus ligands toward metal ions.
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Affiliation(s)
- Yusheng Zhang
- Xi'an Modern Chemistry Research Institute, Xi'an 710065, China
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Wuhua Duan
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Yuning Yang
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Zhijin Zhao
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Guoxi Ren
- Shanghai Synchrotron Radiation Facility, Zhangjiang Laboratory, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201204, China
| | - Nian Zhang
- Shanghai Synchrotron Radiation Facility, Zhangjiang Laboratory, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201204, China
| | - Lei Zheng
- Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, China
| | - Jing Chen
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Jianchen Wang
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Taoxiang Sun
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
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6
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Lukens WW, Minasian SG, Booth CH. Strengths of covalent bonds in LnO 2 determined from O K-edge XANES spectra using a Hubbard model. Chem Sci 2023; 14:12784-12795. [PMID: 38020387 PMCID: PMC10646950 DOI: 10.1039/d3sc03304j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Accepted: 10/25/2023] [Indexed: 12/01/2023] Open
Abstract
In LnO2 (Ln = Ce, Pr, and Tb), the amount of Ln 4f mixing with O 2p orbitals was determined by O K-edge X-ray absorption near edge (XANES) spectroscopy and was similar to the amount of mixing between the Ln 5d and O 2p orbitals. This similarity was unexpected since the 4f orbitals are generally perceived to be "core-like" and can only weakly stabilize ligand orbitals through covalent interactions. While the degree of orbital mixing seems incompatible with this view, orbital mixing alone does not determine the degree of stabilization provided by a covalent interaction. We used a Hubbard model to determine this stabilization from the energies of the O 2p to 4f, 5d(eg), and 5d(t2g) excited charge-transfer states and the amount of excited state character mixed into the ground state, which was determined using Ln L3-edge and O K-edge XANES spectroscopy. The largest amount of stabilization due to mixing between the Ln 4f and O 2p orbitals was 1.6(1) eV in CeO2. While this energy is substantial, the stabilization provided by mixing between the Ln 5d and O 2p orbitals was an order of magnitude greater consistent with the perception that covalent bonding in the lanthanides is largely driven by the 5d orbitals rather than the 4f orbitals.
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Affiliation(s)
- Wayne W Lukens
- Chemical Sciences Division, Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
| | - Stefan G Minasian
- Chemical Sciences Division, Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
| | - Corwin H Booth
- Chemical Sciences Division, Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
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7
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Xu M, Li A, Pennycook SJ, Gao SP, Zhou W. Probing a Defect-Site-Specific Electronic Orbital in Graphene with Single-Atom Sensitivity. PHYSICAL REVIEW LETTERS 2023; 131:186202. [PMID: 37977630 DOI: 10.1103/physrevlett.131.186202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2023] [Accepted: 09/05/2023] [Indexed: 11/19/2023]
Abstract
Visualization of individual electronic states ascribed to specific unoccupied orbitals at the atomic scale can reveal fundamental information about chemical bonding, but it is challenging since bonding often results in only subtle variations in the whole density of states. Here, we utilize atomic-resolution energy-loss near-edge fine structure (ELNES) spectroscopy to map out the electronic states attributed to specific unoccupied p_{z} orbital around a fourfold coordinated silicon point defect in graphene, which is further supported by theoretical calculations. Our results illustrate the power of atomic-resolution ELNES towards the probing of defect-site-specific electronic orbitals in monolayer crystals, providing insights into understanding the effect of chemical bonding on the local properties of defects in solids.
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Affiliation(s)
- Mingquan Xu
- School of Physical Sciences and CAS Key Laboratory of Vacuum Physics, University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
| | - Aowen Li
- School of Physical Sciences and CAS Key Laboratory of Vacuum Physics, University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
| | - Stephen J Pennycook
- School of Physical Sciences and CAS Key Laboratory of Vacuum Physics, University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
| | - Shang-Peng Gao
- Department of Materials Science, Fudan University, Shanghai, 200433, People's Republic of China
| | - Wu Zhou
- School of Physical Sciences and CAS Key Laboratory of Vacuum Physics, University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
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8
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Kotobi A, Singh K, Höche D, Bari S, Meißner RH, Bande A. Integrating Explainability into Graph Neural Network Models for the Prediction of X-ray Absorption Spectra. J Am Chem Soc 2023; 145:22584-22598. [PMID: 37807700 PMCID: PMC10591337 DOI: 10.1021/jacs.3c07513] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Indexed: 10/10/2023]
Abstract
The use of sophisticated machine learning (ML) models, such as graph neural networks (GNNs), to predict complex molecular properties or all kinds of spectra has grown rapidly. However, ensuring the interpretability of these models' predictions remains a challenge. For example, a rigorous understanding of the predicted X-ray absorption spectrum (XAS) generated by such ML models requires an in-depth investigation of the respective black-box ML model used. Here, this is done for different GNNs based on a comprehensive, custom-generated XAS data set for small organic molecules. We show that a thorough analysis of the different ML models with respect to the local and global environments considered in each ML model is essential for the selection of an appropriate ML model that allows a robust XAS prediction. Moreover, we employ feature attribution to determine the respective contributions of various atoms in the molecules to the peaks observed in the XAS spectrum. By comparing this peak assignment to the core and virtual orbitals from the quantum chemical calculations underlying our data set, we demonstrate that it is possible to relate the atomic contributions via these orbitals to the XAS spectrum.
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Affiliation(s)
- Amir Kotobi
- Helmholtz-Zentrum
Hereon, Institute of Surface
Science, Geesthacht, DE 21502, Germany
| | - Kanishka Singh
- Helmholtz-Zentrum
Berlin für Materialien und Energie GmbH, Berlin, DE 10409, Germany
- Institute
of Chemistry and Biochemistry, Freie Universität
Berlin, Berlin, DE 14195, Germany
| | - Daniel Höche
- Helmholtz-Zentrum
Hereon, Institute of Surface
Science, Geesthacht, DE 21502, Germany
| | - Sadia Bari
- Deutsches
Elektronen-Synchrotron DESY, Hamburg, DE 22607, Germany
- Zernike
Institute for Advanced Materials, University
of Groningen, Groningen 9712, Netherlands
| | - Robert H. Meißner
- Helmholtz-Zentrum
Hereon, Institute of Surface
Science, Geesthacht, DE 21502, Germany
- Hamburg
University of Technology, Institute of Polymers
and Composites, Hamburg, DE 21073, Germany
| | - Annika Bande
- Helmholtz-Zentrum
Berlin für Materialien und Energie GmbH, Berlin, DE 10409, Germany
- Leibniz
University Hannover, Institute of Inorganic
Chemistry, Hannover, DE 30167, Germany
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9
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Kasper JM, Li X, Kozimor SA, Batista ER, Yang P. Relativistic Effects in Modeling the Ligand K-Edge X-ray Absorption Near-Edge Structure of Uranium Complexes. J Chem Theory Comput 2022; 18:2171-2179. [PMID: 35274960 DOI: 10.1021/acs.jctc.1c00851] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Accurate modeling of the complex electronic structure of actinide complexes requires full inclusion of relativistic effects. In this study, we examine the effect of explicit inclusion of spin-orbit coupling (SOC) versus scalar relativistic effects on the predicted spectra for heavy-element complexes. In this study, we employ a relativistic two-component Hamiltonian in the X2C form with all of the electrons in the system being considered explicitly to compare and contrast with previous studies that included the relativistic effects by means of relativistic effective core potentials (RECPs). A few uranium complexes are chosen as model systems. Comparison of the computed Cl K-edge X-ray absorption spectra with experimental data shows significantly improved agreement when a variational relativistic treatment of SOC is performed. In particular, we note the importance of SOC terms to obtain not only correct transition energies but also correct intensities for these heavy-element complexes because of the redistribution of ligand bonding character among the valence MOs. While RECPs generally agree well with all-electron scalar relativistic calculations, there are some differences in the predicted spectra of open-shell systems. These methods are still suitable for broad application to analyze the qualitative nature of transitions in X-ray absorption spectra, but caution is recommended for quantitative analysis, as SOC can be non-negligible for both open- and closed-shell heavy-element systems.
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Affiliation(s)
- Joseph M Kasper
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States.,Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Xiaosong Li
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States.,Pacific Northwest National Laboratory, Richland, Washington 99354, United States
| | - Stosh A Kozimor
- Chemistry Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Enrique R Batista
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Ping Yang
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
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10
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Zhang Y, Duan W, Wang Q, Zheng L, Wang J, Chen J, Sun T. Covalency between the uranyl ion and dithiophosphinate by sulfur K-edge X-ray absorption spectroscopy and density functional theory. JOURNAL OF SYNCHROTRON RADIATION 2022; 29:11-20. [PMID: 34985418 PMCID: PMC8733989 DOI: 10.1107/s160057752101198x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Accepted: 11/10/2021] [Indexed: 06/14/2023]
Abstract
The dithiophosphinic acids (HS2PR2) have been used for the selective separation of trivalent actinides (AnIII) from lanthanides (LnIII) over the past decades. The substituents on the dithiophosphinic acids dramatically impact the separation performance, but the mechanism is still open for debate. In this work, two dithiophosphinic acids with significantly different AnIII/LnIII separation performance, i.e. diphenyl dithiophosphinic acid (HS2PPh2) and bis(ortho-trifluoromethylphenyl) dithiophosphinic acid [HS2P(o-CF3C6H4)2], are employed to understand the substituent effect on the bonding covalency between the S2PR2- anions (R = Ph and o-CF3C6H4) and the uranyl ion by sulfur K-edge X-ray absorption spectroscopy (XAS) in combination with density functional theory calculations. The two UO2(S2PR2)(EtOH) complexes display similar XAS spectra, in which the first pre-edge feature with an intensity of 0.16 is entirely attributed to the transitions from S 1s orbitals to the unoccupied molecular orbitals due to the mixing between U 5f and S 3p orbitals. The Mulliken population analysis indicates that the amount of \% S 3p character in these orbitals is essentially identical for the UO2(S2PPh2)2(EtOH) and UO2[S2P(o-CF3C6H4)2]2(EtOH) complexes, which is lower than that in the U 6d-based orbitals. The essentially identical covalency in U-S bonds for the two UO2(S2PR2)2(EtOH) complexes are contradictory to the significantly different AnIII/LnIII separation performance of the two dithiophosphinic acids, thus the covalency seems to be unable to account for substituent effects in the AnIII/LnIII separation by the dithiophosphinic acids. The results in this work provide valuable insight into the understanding of the mechanism in the AnIII/LnIII separation by the dithiophosphinic acids.
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Affiliation(s)
- Yusheng Zhang
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, People’s Republic of China
| | - Wuhua Duan
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, People’s Republic of China
| | - Qiang Wang
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, People’s Republic of China
| | - Lei Zheng
- Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, People’s Republic of China
| | - Jianchen Wang
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, People’s Republic of China
| | - Jing Chen
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, People’s Republic of China
| | - Taoxiang Sun
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, People’s Republic of China
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11
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Zhang Y, Duan W, Yang Y, Jian T, Qiao Y, Ren G, Zhang N, Zheng L, Yan W, Wang J, Chen J, Minasian SG, Sun T. Involvement of 5f Orbitals in the Covalent Bonding between the Uranyl Ion and Trialkyl Phosphine Oxide: Unraveled by Oxygen K-Edge X-ray Absorption Spectroscopy and Density Functional Theory. Inorg Chem 2021; 61:92-104. [PMID: 34817979 DOI: 10.1021/acs.inorgchem.1c02236] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Monodentate organophosphorus ligands have been used for the extraction of the uranyl ion (UO22+) for over half a century and have exhibited exceptional extractability and selectivity toward the uranyl ion due to the presence of the phosphoryl group (O═P). Tributyl phosphate (TBP) is the extractant of the world-renowned PUREX process, which selectively recovers uranium from spent nuclear fuel. Trialkyl phosphine oxide (TRPO) shows extractability toward the uranyl ion that far exceeds that for other metal ions, and it has been used in the TRPO process. To date, however, the mechanism of the high affinity of the phosphoryl group for UO22+ remains elusive. We herein investigate the bonding covalency in a series of complexes of UO22+ with TRPO by oxygen K-edge X-ray absorption spectroscopy (XAS) in combination with density functional theory (DFT) calculations. Four TRPO ligands with different R substituents are examined in this work, for which both the ligands and their uranyl complexes are crystallized and investigated. The study of the electronic structure of the TRPO ligands reveals that the two TRPO molecules, irrespective of their substituents, can engage in σ- and π-type interactions with U 5f and 6d orbitals in the UO2Cl2(TRPO)2 complexes. Although both the axial (Oyl) and equatorial (Oeq) oxygen atoms in the UO2Cl2(TRPO)2 complexes contribute to the X-ray absorption, the first pre-edge feature in the O K-edge XAS with a small intensity is exclusively contributed by Oeq and is assigned to the transition from Oeq 1s orbitals to the unoccupied molecular orbitals of 1b1u + 1b2u + 1b3u symmetries resulting from the σ- and π-type mixing between U 5f and Oeq 2p orbitals. The small intensity in the experimental spectra is consistent with the small amount of Oeq 2p character in these orbitals for the four UO2Cl2(TRPO)2 complexes as obtained by Mulliken population analysis. The DFT calculations demonstrate that the U 6d orbitals are also involved in the U-TRPO bonding interactions in the UO2Cl2(TRPO)2 complexes. The covalent bonding interactions between TRPO and UO22+, especially the contributions from U 5f orbitals, while appearing to be small, are sufficiently responsible for the exceptional extractability and selectivity of monodentate organophosphorus ligands for the uranyl ion. Our results provide valuable insight into the fundamental actinide chemistry and are expected to directly guide actinide separation schemes needed for the development of advanced nuclear fuel cycle technologies.
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Affiliation(s)
- Yusheng Zhang
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Wuhua Duan
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Yuning Yang
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Tian Jian
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Yusen Qiao
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Guoxi Ren
- Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai 200050, China
| | - Nian Zhang
- Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai 200050, China
| | - Lei Zheng
- Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, China
| | - Wensheng Yan
- University of Science and Technology of China, National Synchrotron Radiation Laboratory, Hefei 230029, China
| | - Jianchen Wang
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Jing Chen
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
| | - Stefan G Minasian
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Taoxiang Sun
- Institute of Nuclear and New Energy Technology, Tsinghua University, Beijing 100084, China
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12
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Qiao Y, Ganguly G, Booth CH, Branson JA, Ditter AS, Lussier DJ, Moreau LM, Russo DR, Sergentu DC, Shuh DK, Sun T, Autschbach J, Minasian SG. Enhanced 5f-δ bonding in [U(C 7H 7) 2] -: C K-edge XAS, magnetism, and ab initio calculations. Chem Commun (Camb) 2021; 57:9562-9565. [PMID: 34546232 DOI: 10.1039/d1cc03414f] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
5f covalency in [U(C7H7)2]- was probed with carbon K-edge X-ray absorption spectroscopy (XAS) and electronic structure theory. The results revealed U 5f orbital participation in δ-bonding in both the ground- and core-excited states; additional 5f ϕ-mixing is observed in the core-excited states. Comparisons with U(C8H8)2 show greater δ-covalency for [U(C7H7)2]-.
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Affiliation(s)
- Yusen Qiao
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
| | - Gaurab Ganguly
- Department of Chemistry, University at Buffalo, State University of New York, Buffalo, NY 14260-3000, USA.
| | - Corwin H Booth
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
| | - Jacob A Branson
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA. .,Department of Chemistry, University of California, Berkeley, CA 94720, USA
| | - Alexander S Ditter
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
| | - Daniel J Lussier
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA. .,Department of Chemistry, University of California, Berkeley, CA 94720, USA
| | - Liane M Moreau
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
| | - Dominic R Russo
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA. .,Department of Chemistry, University of California, Berkeley, CA 94720, USA
| | - Dumitru-Claudiu Sergentu
- Department of Chemistry, University at Buffalo, State University of New York, Buffalo, NY 14260-3000, USA.
| | - David K Shuh
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
| | - Taoxiang Sun
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
| | - Jochen Autschbach
- Department of Chemistry, University at Buffalo, State University of New York, Buffalo, NY 14260-3000, USA.
| | - Stefan G Minasian
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
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13
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London HC, Whittemore TJ, Gale AG, McMillen CD, Pritchett DY, Myers AR, Thomas HD, Shields GC, Wagenknecht PS. Ligand-to-Metal Charge-Transfer Photophysics and Photochemistry of Emissive d 0 Titanocenes: A Spectroscopic and Computational Investigation. Inorg Chem 2021; 60:14399-14409. [PMID: 34495657 DOI: 10.1021/acs.inorgchem.1c02182] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Complexes with ligand-to-metal charge-transfer (LMCT) excited states involving d0 metals represent a new design for photocatalysts. Herein, the photochemistry and photophysics of d0 titanocenes of the type Cp2Ti(C2R)2, where C2R = ethynylphenyl (C2Ph), 4-ethynyldimethylaniline (C2DMA), or 4-ethynyltriphenylamine (C2TPA), have been investigated. Cp2Ti(C2Ph)2 and Cp2Ti(C2DMA)2 have also been characterized by single-crystal X-ray diffraction. The two aryl rings in Cp2Ti(C2DMA)2 are nearly face-to-face in the solid state, whereas they are mutually perpendicular for Cp2Ti(C2Ph)2. All three complexes are brightly emissive at 77 K but photodecompose at room temperature when irradiated into their lowest-energy absorption band. The emission wavelengths and photodecomposition quantum yields are as follows: Cp2Ti(C2Ph)2, 575 nm and 0.65; Cp2Ti(C2TPA)2, 642 nm and 0.42; Cp2Ti(C2DMA)2, 672 nm and 0.25. Extensive benchmarking of the density functional theory (DFT) model against the structural data and of the time-dependent DFT (TDDFT) model against the absorption and emission data was performed using combinations of 13 different functionals and 4 basis sets. The model that predicted the absorption and emission data with the greatest fidelity utilized MN15/LANL2DZ for both the DFT optimization and the TDDFT. Computational analysis shows that absorption involves a transition to a 1LMCT state. Whereas the spectroscopic data for Cp2Ti(C2TPA)2 and Cp2Ti(C2DMA)2 are well modeled using the optimized structure of these complexes, Cp2Ti(C2Ph)2 required averaging of the spectra from multiple rotamers involving rotation of the Ph rings. Consistent with this finding, an energy scan of all rotamers showed a very flat energetic surface, with less than 1.3 kcal/mol separating the minimum and maximum. The computational data suggest that emission occurs from a 3LMCT state. Optimization of the 3LMCT state demonstrates compression of the C-Ti-C bond angle, consistent with the known products of photodecomposition.
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Affiliation(s)
- Henry C London
- Department of Chemistry, Furman University, Greenville, South Carolina 29609, United States
| | - Thomas J Whittemore
- Department of Chemistry, Furman University, Greenville, South Carolina 29609, United States
| | - Ariel G Gale
- Department of Chemistry, Furman University, Greenville, South Carolina 29609, United States
| | - Colin D McMillen
- Department of Chemistry, Clemson University, Clemson, South Carolina 29634, United States
| | - David Y Pritchett
- Department of Chemistry, Furman University, Greenville, South Carolina 29609, United States
| | - Alexis R Myers
- Department of Chemistry, Furman University, Greenville, South Carolina 29609, United States
| | - Hannah D Thomas
- Department of Chemistry, Furman University, Greenville, South Carolina 29609, United States
| | - George C Shields
- Department of Chemistry, Furman University, Greenville, South Carolina 29609, United States
| | - Paul S Wagenknecht
- Department of Chemistry, Furman University, Greenville, South Carolina 29609, United States
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14
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Smiles DE, Batista ER, Booth CH, Clark DL, Keith JM, Kozimor SA, Martin RL, Minasian SG, Shuh DK, Stieber SCE, Tyliszczak T. The duality of electron localization and covalency in lanthanide and actinide metallocenes. Chem Sci 2020; 11:2796-2809. [PMID: 34084340 PMCID: PMC8157540 DOI: 10.1039/c9sc06114b] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2019] [Accepted: 02/04/2020] [Indexed: 12/14/2022] Open
Abstract
Previous magnetic, spectroscopic, and theoretical studies of cerocene, Ce(C8H8)2, have provided evidence for non-negligible 4f-electron density on Ce and implied that charge transfer from the ligands occurs as a result of covalent bonding. Strong correlations of the localized 4f-electrons to the delocalized ligand π-system result in emergence of Kondo-like behavior and other quantum chemical phenomena that are rarely observed in molecular systems. In this study, Ce(C8H8)2 is analyzed experimentally using carbon K-edge and cerium M5,4-edge X-ray absorption spectroscopies (XAS), and computationally using configuration interaction (CI) calculations and density functional theory (DFT) as well as time-dependent DFT (TDDFT). Both spectroscopic approaches provide strong evidence for ligand → metal electron transfer as a result of Ce 4f and 5d mixing with the occupied C 2p orbitals of the C8H8 2- ligands. Specifically, the Ce M5,4-edge XAS and CI calculations show that the contribution of the 4f1, or Ce3+, configuration to the ground state of Ce(C8H8)2 is similar to strongly correlated materials such as CeRh3 and significantly larger than observed for other formally Ce4+ compounds including CeO2 and CeCl6 2-. Pre-edge features in the experimental and TDDFT-simulated C K-edge XAS provide unequivocal evidence for C 2p and Ce 4f covalent orbital mixing in the δ-antibonding orbitals of e2u symmetry, which are the unoccupied counterparts to the occupied, ligand-based δ-bonding e2u orbitals. The C K-edge peak intensities, which can be compared directly to the C 2p and Ce 4f orbital mixing coefficients determined by DFT, show that covalency in Ce(C8H8)2 is comparable in magnitude to values reported previously for U(C8H8)2. An intuitive model is presented to show how similar covalent contributions to the ground state can have different impacts on the overall stability of f-element metallocenes.
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Affiliation(s)
- Danil E Smiles
- Lawrence Berkeley National Laboratory Berkeley California 94720 USA
| | | | - Corwin H Booth
- Lawrence Berkeley National Laboratory Berkeley California 94720 USA
| | - David L Clark
- Los Alamos National Laboratory Los Alamos New Mexico 87545 USA
| | | | - Stosh A Kozimor
- Los Alamos National Laboratory Los Alamos New Mexico 87545 USA
| | | | | | - David K Shuh
- Lawrence Berkeley National Laboratory Berkeley California 94720 USA
| | | | - Tolek Tyliszczak
- Lawrence Berkeley National Laboratory Berkeley California 94720 USA
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15
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Ganguly G, Sergentu D, Autschbach J. Ab Initio Analysis of Metal–Ligand Bonding in An(COT)
2
with An=Th, U in Their Ground‐ and Core‐Excited States. Chemistry 2020; 26:1776-1788. [DOI: 10.1002/chem.201904166] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2019] [Revised: 11/15/2019] [Indexed: 11/12/2022]
Affiliation(s)
- Gaurab Ganguly
- Department of Chemistry University at Buffalo State University of New York Buffalo NY 14260-3000 USA
| | - Dumitru‐Claudiu Sergentu
- Department of Chemistry University at Buffalo State University of New York Buffalo NY 14260-3000 USA
| | - Jochen Autschbach
- Department of Chemistry University at Buffalo State University of New York Buffalo NY 14260-3000 USA
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16
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Gompa TP, Ramanathan A, Rice NT, La Pierre HS. The chemical and physical properties of tetravalent lanthanides: Pr, Nd, Tb, and Dy. Dalton Trans 2020; 49:15945-15987. [DOI: 10.1039/d0dt01400a] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
The thermochemistry, descriptive chemistry, spectroscopy, and physical properties of the tetravalent lanthanides (Pr, Nd, Tb and Dy) in extended phases, gas phase, solution, and as isolable molecular complexes are presented.
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Affiliation(s)
- Thaige P. Gompa
- Department of Chemistry and Biochemistry
- Georgia Institute of Technology
- Atlanta
- USA
| | - Arun Ramanathan
- Department of Chemistry and Biochemistry
- Georgia Institute of Technology
- Atlanta
- USA
| | - Natalie T. Rice
- Department of Chemistry and Biochemistry
- Georgia Institute of Technology
- Atlanta
- USA
| | - Henry S. La Pierre
- Department of Chemistry and Biochemistry
- Georgia Institute of Technology
- Atlanta
- USA
- Nuclear and Radiological Engineering Program
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17
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Phillips NA, Smith PW, Tilley TD, Minasian SG. Gauging aromatic conjugation and charge delocalization in the aryl silanes Ph nSiH 4−n ( n = 0–4), with silicon K-edge XAS and TDDFT. Dalton Trans 2020; 49:13176-13184. [DOI: 10.1039/d0dt03153d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Si K-edge X-ray absorption spectra (XAS) have been measured experimentally and calculated using time-dependent density functional theory (TDDFT) to investigate electronic structure in aryl silanes, PhnSiH4−n (n = 0–4).
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Affiliation(s)
- Nicholas A. Phillips
- Chemical Sciences Division
- Lawrence Berkeley National Laboratory
- Berkeley
- USA
- Department of Chemistry
| | | | - T. Don Tilley
- Chemical Sciences Division
- Lawrence Berkeley National Laboratory
- Berkeley
- USA
- Department of Chemistry
| | - Stefan G. Minasian
- Chemical Sciences Division
- Lawrence Berkeley National Laboratory
- Berkeley
- USA
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18
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Sergentu DC, Duignan TJ, Autschbach J. Ab Initio Study of Covalency in the Ground versus Core-Excited States and X-ray Absorption Spectra of Actinide Complexes. J Phys Chem Lett 2018; 9:5583-5591. [PMID: 30180572 DOI: 10.1021/acs.jpclett.8b02412] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Relativistic multireference ab initio wave function calculations within the restricted active space (RAS) framework were performed to calculate metal and ligand X-ray absorption (XAS) near-edge spectroscopy (XANES) intensities for the metal M4,5 edges of [PuO2(H2O)5]2+, [AnVIO2]2+ (An = U, Np, Pu), and [AmCl6]3- and the Cl K edge of the Am complex. The extent of An(5f)-ligand bonding was determined via natural localized molecular orbital analyses of the relevant spin-orbit coupled multireference states. The calculated spectra are in good agreement with experiments and allow a detailed assignment of the observed spectral features. The XANES M4,5-edge spectra are representative of the actinide orbital covalency in the probed core-excited states, which may be different from the ground-state covalency. An assignment of ground-state An orbital covalency based on XAS spectra should therefore be made with caution.
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Affiliation(s)
- Dumitru-Claudiu Sergentu
- Department of Chemistry , University at Buffalo, The State University of New York , Buffalo , New York 14260-3000 , United States
| | - Thomas J Duignan
- Department of Chemistry , University at Buffalo, The State University of New York , Buffalo , New York 14260-3000 , United States
| | - Jochen Autschbach
- Department of Chemistry , University at Buffalo, The State University of New York , Buffalo , New York 14260-3000 , United States
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19
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Lee K, Wei H, Blake AV, Donahue CM, Keith JM, Daly SR. Measurement of Diphosphine σ-Donor and π-Acceptor Properties in d0 Titanium Complexes Using Ligand K-Edge XAS and TDDFT. Inorg Chem 2018; 57:10277-10286. [DOI: 10.1021/acs.inorgchem.8b01511] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Kyounghoon Lee
- Department of Chemistry, The University of Iowa, E331 Chemistry Building, Iowa City, Iowa 52242-1294, United States
| | - Haochuan Wei
- Department of Chemistry, Colgate University, 13 Oak Drive, Hamilton, New York 13346, United States
| | - Anastasia V. Blake
- Department of Chemistry, The University of Iowa, E331 Chemistry Building, Iowa City, Iowa 52242-1294, United States
| | - Courtney M. Donahue
- Department of Chemistry, The University of Iowa, E331 Chemistry Building, Iowa City, Iowa 52242-1294, United States
| | - Jason M. Keith
- Department of Chemistry, Colgate University, 13 Oak Drive, Hamilton, New York 13346, United States
| | - Scott R. Daly
- Department of Chemistry, The University of Iowa, E331 Chemistry Building, Iowa City, Iowa 52242-1294, United States
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20
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Chantzis A, Kowalska JK, Maganas D, DeBeer S, Neese F. Ab Initio Wave Function-Based Determination of Element Specific Shifts for the Efficient Calculation of X-ray Absorption Spectra of Main Group Elements and First Row Transition Metals. J Chem Theory Comput 2018; 14:3686-3702. [DOI: 10.1021/acs.jctc.8b00249] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Agisilaos Chantzis
- Max Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Joanna K. Kowalska
- Max Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany
| | - Dimitrios Maganas
- Max Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Serena DeBeer
- Max Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany
| | - Frank Neese
- Max Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
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21
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Rungthanaphatsophon P, Huang P, Walensky JR. Phosphorano-Stabilized Carbene Complexes with Short Thorium(IV)– and Uranium(IV)–Carbon Bonds. Organometallics 2018. [DOI: 10.1021/acs.organomet.8b00137] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | - Patrick Huang
- Department of Chemistry and Biochemistry, California State University, East Bay, Hayward, California 94542, United States
| | - Justin R. Walensky
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
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22
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Blake AV, Wei H, Lee K, Donahue CM, Keith JM, Daly SR. Solution and Solid-State Ligand K-Edge XAS Studies of PdCl2
Diphosphine Complexes with Phenyl and Cyclohexyl Substituents. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800203] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Anastasia V. Blake
- Department of Chemistry; The University of Iowa; E331 Chemistry Building 52242-1294 Iowa City IA USA
| | - Haochuan Wei
- Department of Chemistry; Colgate University; 13 Oak Dr. 13346 Hamilton NY USA
| | - Kyounghoon Lee
- Department of Chemistry; The University of Iowa; E331 Chemistry Building 52242-1294 Iowa City IA USA
| | - Courtney M. Donahue
- Department of Chemistry; The University of Iowa; E331 Chemistry Building 52242-1294 Iowa City IA USA
| | - Jason M. Keith
- Department of Chemistry; Colgate University; 13 Oak Dr. 13346 Hamilton NY USA
| | - Scott R. Daly
- Department of Chemistry; The University of Iowa; E331 Chemistry Building 52242-1294 Iowa City IA USA
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23
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Minasian SG, Batista ER, Booth CH, Clark DL, Keith JM, Kozimor SA, Lukens WW, Martin RL, Shuh DK, Stieber SCE, Tylisczcak T, Wen XD. Quantitative Evidence for Lanthanide-Oxygen Orbital Mixing in CeO2, PrO2, and TbO2. J Am Chem Soc 2017; 139:18052-18064. [DOI: 10.1021/jacs.7b10361] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Stefan G. Minasian
- Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Enrique R. Batista
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - Corwin H. Booth
- Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - David L. Clark
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - Jason M. Keith
- Colgate University, Hamilton, New York 13346, United States
| | - Stosh A. Kozimor
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - Wayne W. Lukens
- Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Richard L. Martin
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - David K. Shuh
- Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | | | - Tolek Tylisczcak
- Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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24
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Duignan TJ, Autschbach J, Batista E, Yang P. Assessment of Tuned Range Separated Exchange Functionals for Spectroscopies and Properties of Uranium Complexes. J Chem Theory Comput 2017; 13:3614-3625. [DOI: 10.1021/acs.jctc.7b00526] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Thomas J. Duignan
- Department
of Chemistry, University at Buffalo, State University of New York, Buffalo, New York 14260-3000, United States
- Theoretical Division Los Alamos National Laboratory, Los Alamos, New Mexico 87544, United States
| | - Jochen Autschbach
- Department
of Chemistry, University at Buffalo, State University of New York, Buffalo, New York 14260-3000, United States
| | - Enrique Batista
- Theoretical Division Los Alamos National Laboratory, Los Alamos, New Mexico 87544, United States
| | - Ping Yang
- Theoretical Division Los Alamos National Laboratory, Los Alamos, New Mexico 87544, United States
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25
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Güette-Fernández JR, Meléndez E, Maldonado-Rojas W, Ortega-Zúñiga C, Olivero-Verbel J, Parés-Matos EI. A molecular docking study of the interactions between human transferrin and seven metallocene dichlorides. J Mol Graph Model 2017; 75:250-265. [PMID: 28609757 DOI: 10.1016/j.jmgm.2017.05.005] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2016] [Revised: 05/08/2017] [Accepted: 05/09/2017] [Indexed: 02/08/2023]
Abstract
Human Transferrin (hTf) is a metal-binding protein found in blood plasma and is well known for its role in iron delivery. With only a 30% of its capacity for Fe+3 binding, this protein has the potential ability to transport other metal ions or organometallic compounds from the blood stream to all cell tissues. In this perspective, recent studies have described seven metallocene dichlorides (Cp2M(IV)Cl2, M(IV)=V, Mo, W, Nb, Ti, Zr, Hf) suitable as anticancer drugs and less secondary effects than cisplatin. However, these studies have not provided enough data to clearly explain how hTf binds and transports these organometallic compounds into the cells. Thus, a computational docking study with native apo-hTf using Sybyl-X 2.0 program was conducted to explore the binding modes of these seven Cp2M(IV)Cl2 after their optimization and minimization using Gaussian 09. Our model showed that the first three Cp2M(IV)Cl2 (M(IV)=V, Mo, W) can interact with apo-hTf on a common binding site with the amino acid residues Leu-46, Ile-49, Arg-50, Leu-66, Asp-69, Ala-70, Leu-72, Ala-73, Pro-74 and Asn-75, while the next four Cp2M(IV)Cl2 (M(IV)=Nb, Ti, Zr, Hf) showed different binding sites, unknown until now. A decreasing order in the total score (equal to -log Kd) was observed from these docking studies: W (5.4356), Mo (5.2692), Nb (5.1672), V (4.5973), Ti (3.6529), Zr (2.0054) and Hf (1.8811). High and significant correlation between the affinity of these seven ligands (metallocenes) for apo-hTf and their bond angles CpMCp (r=0.94, p<0.01) and Cl-M-Cl (r=0.95, p<0.01) were observed, thus indicating the important role that these bond angles can play in ligand-protein interactions. Fluorescence spectra of apo-hTf, measured at pH 7.4, had a decrease in the fluorescence emission spectrum with increasing concentration of Cp2M(IV)Cl2. Experimental data has a good correlation between KA (r=0.84, p=0.027) and Kd (r=0.94, p=0.0014) values and the calculated total scores obtained from our docking experiments. In conclusion, these results suggest that the seven Cp2M(IV)Cl2 used for this study can interact with apo-hTf, and their affinity was directly and inversely proportional to their bond angles CpMCp and ClMCl, respectively. Our docking studies also suggest that the binding of the first three Cp2M(IV)Cl2 (M(IV)=V, Mo, W) to hTf could abrogate the formation of the hTf-receptor complex, and as a consequence the metallocene-hTf complex might require another transport mechanism in order to get into the cell.
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Affiliation(s)
- Jorge R Güette-Fernández
- Department of Chemistry at Mayagüez, University of Puerto Rico, Mayagüez, PR 00681; Environmental and Computational Chemistry Group, School of Pharmaceutical Sciences, Zaragocilla Campus, University of Cartagena, 130014, Cartagena, Colombia
| | - Enrique Meléndez
- Department of Chemistry at Mayagüez, University of Puerto Rico, Mayagüez, PR 00681
| | - Wilson Maldonado-Rojas
- Environmental and Computational Chemistry Group, School of Pharmaceutical Sciences, Zaragocilla Campus, University of Cartagena, 130014, Cartagena, Colombia
| | - Carlos Ortega-Zúñiga
- Department of Chemistry at Mayagüez, University of Puerto Rico, Mayagüez, PR 00681; Environmental and Computational Chemistry Group, School of Pharmaceutical Sciences, Zaragocilla Campus, University of Cartagena, 130014, Cartagena, Colombia
| | - Jesus Olivero-Verbel
- Environmental and Computational Chemistry Group, School of Pharmaceutical Sciences, Zaragocilla Campus, University of Cartagena, 130014, Cartagena, Colombia
| | - Elsie I Parés-Matos
- Department of Chemistry at Mayagüez, University of Puerto Rico, Mayagüez, PR 00681.
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26
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Altman AB, Pemmaraju CD, Alayoglu S, Arnold J, Booth CH, Braun A, Bunker CE, Herve A, Minasian SG, Prendergast D, Shuh DK, Tyliszczak T. Chemical and Morphological Inhomogeneity of Aluminum Metal and Oxides from Soft X-ray Spectromicroscopy. Inorg Chem 2017; 56:5710-5719. [PMID: 28471186 DOI: 10.1021/acs.inorgchem.7b00280] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Oxygen and aluminum K-edge X-ray absorption spectroscopy (XAS), imaging from a scanning transmission X-ray microscope (STXM), and first-principles calculations were used to probe the composition and morphology of bulk aluminum metal, α- and γ-Al2O3, and several types of aluminum nanoparticles. The imaging results agreed with earlier transmission electron microscopy studies that showed a 2 to 5 nm thick layer of Al2O3 on all the Al surfaces. Spectral interpretations were guided by examination of the calculated transition energies, which agreed well with the spectroscopic measurements. Features observed in the experimental O and Al K-edge XAS were used to determine the chemical structure and phase of the Al2O3 on the aluminum surfaces. For unprotected 18 and 100 nm Al nanoparticles, this analysis revealed an oxide layer that was similar to γ-Al2O3 and comprised of both tetrahedral and octahedral Al coordination sites. For oleic acid-protected Al nanoparticles, only tetrahedral Al oxide coordination sites were observed. The results were correlated to trends in the reactivity of the different materials, which suggests that the structures of different Al2O3 layers have an important role in the accessibility of the underlying Al metal toward further oxidation. Combined, the Al K-edge XAS and STXM results provided detailed chemical information that was not obtained from powder X-ray diffraction or imaging from a transmission electron microscope.
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Affiliation(s)
- Alison B Altman
- Department of Chemistry, University of California , Berkeley, California 94720, United States
| | | | | | - John Arnold
- Department of Chemistry, University of California , Berkeley, California 94720, United States
| | | | | | - Christopher E Bunker
- Air Force Research Laboratory, Propulsion Directorate, Wright-Patterson Air Force Base , Dayton, Ohio 45433, United States
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27
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MacMillan SN, Lancaster KM. X-ray Spectroscopic Interrogation of Transition-Metal-Mediated Homogeneous Catalysis: Primer and Case Studies. ACS Catal 2017. [DOI: 10.1021/acscatal.6b02875] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Samantha N. MacMillan
- Department of Chemistry and
Chemical Biology, Baker Laboratory, Cornell University, Ithaca, New York 14853, United States
| | - Kyle M. Lancaster
- Department of Chemistry and
Chemical Biology, Baker Laboratory, Cornell University, Ithaca, New York 14853, United States
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28
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Pagano JK, Erickson KA, Scott BL, Morris DE, Waterman R, Kiplinger JL. Synthesis and characterization of a new and electronically unusual uranium metallacyclocumulene, (C5Me5)2U(η4-1,2,3,4-PhC4Ph). J Organomet Chem 2017. [DOI: 10.1016/j.jorganchem.2016.10.034] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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29
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Ehlert C, Klamroth T. The quest for best suited references for configuration interaction singles calculations of core excited states. J Comput Chem 2016; 38:116-126. [DOI: 10.1002/jcc.24531] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2016] [Revised: 09/22/2016] [Accepted: 10/16/2016] [Indexed: 01/16/2023]
Affiliation(s)
- Christopher Ehlert
- Institut für Chemie, Theoretische Chemie; Universität Potsdam; Karl-Liebknecht-Str. 24-25 Potsdam-Golm D-14476 Germany
| | - Tillmann Klamroth
- Institut für Chemie, Theoretische Chemie; Universität Potsdam; Karl-Liebknecht-Str. 24-25 Potsdam-Golm D-14476 Germany
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30
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Demir S, Brune N, Van Humbeck J, Mason JA, Plakhova T, Wang S, Tian G, Minasian SG, Tyliszczak T, Yaita T, Kobayashi T, Kalmykov SN, Shiwaku H, Shuh DK, Long JR. Extraction of Lanthanide and Actinide Ions from Aqueous Mixtures Using a Carboxylic Acid-Functionalized Porous Aromatic Framework. ACS CENTRAL SCIENCE 2016; 2:253-65. [PMID: 27163056 PMCID: PMC4850516 DOI: 10.1021/acscentsci.6b00066] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2016] [Indexed: 05/04/2023]
Abstract
Porous aromatic frameworks (PAFs) incorporating a high concentration of acid functional groups possess characteristics that are promising for use in separating lanthanide and actinide metal ions, as required in the treatment of radioactive waste. These materials have been shown to be indefinitely stable to concentrated acids and bases, potentially allowing for multiple adsorption/stripping cycles. Additionally, the PAFs combine exceptional features from MOFs and inorganic/activated carbons giving rise to tunable pore surfaces and maximum chemical stability. Herein, we present a study of the adsorption of selected metal ions, Sr(2+), Fe(3+), Nd(3+), and Am(3+), from aqueous solutions employing a carbon-based porous aromatic framework, BPP-7 (Berkeley Porous Polymer-7). This material displays high metal loading capacities together with excellent adsorption selectivity for neodymium over strontium based on Langmuir adsorption isotherms and ideal adsorbed solution theory (IAST) calculations. Based in part upon X-ray absorption spectroscopy studies, the stronger adsorption of neodymium is attributed to multiple metal ion and binding site interactions resulting from the densely functionalized and highly interpenetrated structure of BPP-7. Recyclability and combustibility experiments demonstrate that multiple adsorption/stripping cycles can be completed with minimal degradation of the polymer adsorption capacity.
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Affiliation(s)
- Selvan Demir
- Department of Chemistry and Department of
Chemical and Biomolecular Engineering, University
of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Materials Sciences
Division,
and Advanced Light
Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Nicholas
K. Brune
- Department of Chemistry and Department of
Chemical and Biomolecular Engineering, University
of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Materials Sciences
Division,
and Advanced Light
Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Jeffrey
F. Van Humbeck
- Department of Chemistry and Department of
Chemical and Biomolecular Engineering, University
of California, Berkeley, California 94720, United States
| | - Jarad A. Mason
- Department of Chemistry and Department of
Chemical and Biomolecular Engineering, University
of California, Berkeley, California 94720, United States
| | - Tatiana
V. Plakhova
- Chemical Sciences Division, Materials Sciences
Division,
and Advanced Light
Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Chemistry
Department, Lomonosov Moscow State University, Leninskie Gory, Moscow 11991, Russia
| | - Shuao Wang
- Department of Chemistry and Department of
Chemical and Biomolecular Engineering, University
of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Materials Sciences
Division,
and Advanced Light
Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Guoxin Tian
- Chemical Sciences Division, Materials Sciences
Division,
and Advanced Light
Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Radiochemistry
Department, China Institute of Atomic Energy, Beijing 102413, China
| | - Stefan G. Minasian
- Chemical Sciences Division, Materials Sciences
Division,
and Advanced Light
Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Tolek Tyliszczak
- Chemical Sciences Division, Materials Sciences
Division,
and Advanced Light
Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Tsuyoshi Yaita
- Actinide
Chemistry Group, Energy and Environment Science Division, Quantum
Beam Science Center, Japan Atomic Energy
Agency, 1-1-1 Kouto,
Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan
| | - Tohru Kobayashi
- Actinide
Chemistry Group, Energy and Environment Science Division, Quantum
Beam Science Center, Japan Atomic Energy
Agency, 1-1-1 Kouto,
Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan
| | - Stepan N. Kalmykov
- Chemistry
Department, Lomonosov Moscow State University, Leninskie Gory, Moscow 11991, Russia
| | - Hideaki Shiwaku
- Actinide
Chemistry Group, Energy and Environment Science Division, Quantum
Beam Science Center, Japan Atomic Energy
Agency, 1-1-1 Kouto,
Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan
| | - David K. Shuh
- Chemical Sciences Division, Materials Sciences
Division,
and Advanced Light
Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Jeffrey R. Long
- Department of Chemistry and Department of
Chemical and Biomolecular Engineering, University
of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Materials Sciences
Division,
and Advanced Light
Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- E-mail:
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31
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Altman AB, Pacold JI, Wang J, Lukens WW, Minasian SG. Evidence for 5d-σ and 5d-π covalency in lanthanide sesquioxides from oxygen K-edge X-ray absorption spectroscopy. Dalton Trans 2016; 45:9948-61. [DOI: 10.1039/c6dt00358c] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The electronic structure in the complete series of stable lanthanide sesquioxides, Ln2O3 (Ln = La to Lu, except radioactive Pm), has been evaluated using oxygen K-edge X-ray absorption spectroscopy with a scanning transmission X-ray microscope (STXM).
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Affiliation(s)
- Alison B. Altman
- Department of Chemistry
- University of California
- Berkeley CA 94720
- USA
- Chemical Sciences Division
| | - Joseph I. Pacold
- Chemical Sciences Division
- Lawrence Berkeley National Laboratory
- Berkeley CA 94720
- USA
| | - Jian Wang
- Canadian Light Source
- Saskatoon
- Canada
| | - Wayne W. Lukens
- Chemical Sciences Division
- Lawrence Berkeley National Laboratory
- Berkeley CA 94720
- USA
| | - Stefan G. Minasian
- Chemical Sciences Division
- Lawrence Berkeley National Laboratory
- Berkeley CA 94720
- USA
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32
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Behrle AC, Levin JR, Kim JE, Drewett JM, Barnes CL, Schelter EJ, Walensky JR. Stabilization of MIV = Ti, Zr, Hf, Ce, and Th using a selenium bis(phenolate) ligand. Dalton Trans 2015; 44:2693-702. [PMID: 25209827 DOI: 10.1039/c4dt01798f] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report M(iv) M = Ti, Zr, Hf, Ce, and Th, complexes of a selenium bis(phenolate) ligand, 2,2'-selenobis(4,6-di-tert-butylphenol), (H(2)(Ar)OSeO), 1. Reaction of Ti(NEt(2))(4) with two equivalents of affords Ti((Ar)OSeO)(2), 2. Salt metathesis of ZrCl(4) and HfCl(4) with two equivalents of Na(2)(Ar)OSeO produces Zr((Ar)OSeO)(2)(THF), 3, and Hf((Ar)OSeO)(2)(THF), 4, respectively. Protonolysis of ThCl[N(SiMe(3))(2)](3) with two equivalents of yields Th((Ar)OSeO)(2)(THF)(2), 5. Salt metathesis of Ce(OTf)(3) and two equivalents of Na(2)(Ar)OSeO produces [Na(THF)(3)][Ce((Ar)OSeO)(2)], which was oxidized in situ using 0.5 equivalents of I(2) to yield the diamagnetic Ce(iv) product, Ce((Ar)OSeO)(2)(THF)(2), 6. Addition of 2,2'-bipyridyl to forms Ce((Ar)OSeO)(2)(bipy), 6a. Each diamagnetic complex was characterized using (1)H, (13)C, and (77)Se NMR and IR spectroscopy and the structures of 2-6a were established with X-ray crystallography. Electrochemical measurements using cyclic voltammetry on complexes 2, 5, and 6a re also reported.
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Affiliation(s)
- Andrew C Behrle
- Department of Chemistry, University of Missouri-Columbia, 601 S. College Avenue, Columbia, MO 65211-7600, USA.
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33
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Olson AC, Keith JM, Batista ER, Boland KS, Daly SR, Kozimor SA, MacInnes MM, Martin RL, Scott BL. Using solution- and solid-state S K-edge X-ray absorption spectroscopy with density functional theory to evaluate M-S bonding for MS4(2-) (M = Cr, Mo, W) dianions. Dalton Trans 2015; 43:17283-95. [PMID: 25311904 DOI: 10.1039/c4dt02302a] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Herein, we have evaluated relative changes in M-S electronic structure and orbital mixing in Group 6 MS4(2-) dianions using solid- and solution-phase S K-edge X-ray absorption spectroscopy (XAS; M = Mo, W), as well as density functional theory (DFT; M = Cr, Mo, W) and time-dependent density functional theory (TDDFT) calculations. To facilitate comparison with solution measurements (conducted in acetonitrile), theoretical models included gas-phase calculations as well as those that incorporated an acetonitrile dielectric, the latter of which provided better agreement with experiment. Two pre-edge features arising from S 1s → e* and t electron excitations were observed in the S K-edge XAS spectra and were reasonably assigned as (1)A1 → (1)T2 transitions. For MoS4(2-), both solution-phase pre-edge peak intensities were consistent with results from the solid-state spectra. For WS4(2-), solution- and solid-state pre-edge peak intensities for transitions involving e* were equivalent, while transitions involving the t orbitals were less intense in solution. Experimental and computational results have been presented in comparison to recent analyses of MO4(2-) dianions, which allowed M-S and M-O orbital mixing to be evaluated as the principle quantum number (n) for the metal valence d orbitals increased (3d, 4d, 5d). Overall, the M-E (E = O, S) analyses revealed distinct trends in orbital mixing. For example, as the Group 6 triad was descended, e* (π*) orbital mixing remained constant in the M-S bonds, but increased appreciably for M-O interactions. For the t orbitals (σ* + π*), mixing decreased slightly for M-S bonding and increased only slightly for the M-O interactions. These results suggested that the metal and ligand valence orbital energies and radial extensions delicately influenced the orbital compositions for isoelectronic ME4(2-) (E = O, S) dianions.
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Affiliation(s)
- Angela C Olson
- Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA.
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34
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Asakura H, Shishido T, Teramura K, Tanaka T. A theoretical approach to La L1-edge XANES spectra of La complex oxides and their local configuration. J Chem Phys 2015; 142:164507. [DOI: 10.1063/1.4919055] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Hiroyuki Asakura
- Synchrotron Radiation Research Center, Nagoya University, Furo-cho, Chikusa, Nagoya 464-8603, Japan
| | - Tetsuya Shishido
- Department of Applied Chemistry, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan
- Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, Kyoto 615-8520, Japan
| | - Kentaro Teramura
- Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, Kyoto 615-8520, Japan
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan
- Precursory Research for Embryonic Science and Technology (PRESTO), Japan Science and Technology Agency (JST), 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Tsunehiro Tanaka
- Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, Kyoto 615-8520, Japan
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan
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35
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Kozhevnikov IV, Filatova EO, Sokolov AA, Konashuk AS, Siewert F, Störmer M, Gaudin J, Keitel B, Samoylova L, Sinn H. Comparative study of the X-ray reflectivity and in-depth profile of a-C, B₄C and Ni coatings at 0.1-2 keV. JOURNAL OF SYNCHROTRON RADIATION 2015; 22:348-353. [PMID: 25723936 DOI: 10.1107/s1600577515000430] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2014] [Accepted: 01/09/2015] [Indexed: 06/04/2023]
Abstract
The use of soft X-rays near the carbon edge of absorption (270-300 eV) greatly enhances studies in various branches of science. However, the choice of reflecting coatings for mirrors operating in free-electron and X-ray free-electron laser (FEL and XFEL) beamlines in this spectral range is not so evident and experimental justifications of the mirror efficiency are rather limited. In the present paper it is demonstrated experimentally that the reflectivity of B4C- and Ni-coated grazing-incidence mirrors is high enough for their operation in FEL or XFEL beamlines near the carbon K-edge of absorption. The minimal reflectivity of both mirrors proves to exceed 80% near the carbon absorption edge at a grazing angle of 0.6°. An in-depth profile of the chemical elements composing the reflecting coatings is reconstructed based on analysis of a set of reflectivity curves measured versus the grazing angle at different photon energies in the soft X-ray spectral region. This allows us to predict correctly the mirror reflectivity at any X-ray energy and any grazing angle.
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Affiliation(s)
- I V Kozhevnikov
- Shubnikov Institute of Crystallography, Russian Academy of Sciences, Leninsky Prospect 59, Moscow 119333, Russian Federation
| | - E O Filatova
- St Petersburg State University, Ulyanovskaya 3, Peterhof, St Petersburg 198504, Russian Federation
| | - A A Sokolov
- St Petersburg State University, Ulyanovskaya 3, Peterhof, St Petersburg 198504, Russian Federation
| | - A S Konashuk
- St Petersburg State University, Ulyanovskaya 3, Peterhof, St Petersburg 198504, Russian Federation
| | - F Siewert
- Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Albert Einstein Strasse 15, 12489 Berlin, Germany
| | - M Störmer
- Helmholtz-Zentrum Geesthacht, Institute of Materials Research, Max-Planck-Strasse 1, 21502 Geesthacht, Germany
| | - J Gaudin
- Université Bordeaux 1, CEA, CNRS, CELIA, 351 Cours de la Libération, 33405 Talence, France
| | - B Keitel
- DESY, Notkestrasse 85, 22607 Hamburg, Germany
| | - L Samoylova
- European XFEL GmbH, Albert Einstein Ring 19, 22761 Hamburg, Germany
| | - H Sinn
- European XFEL GmbH, Albert Einstein Ring 19, 22761 Hamburg, Germany
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36
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Löble MW, Keith JM, Altman AB, Stieber SCE, Batista ER, Boland KS, Conradson SD, Clark DL, Lezama Pacheco J, Kozimor SA, Martin RL, Minasian SG, Olson AC, Scott BL, Shuh DK, Tyliszczak T, Wilkerson MP, Zehnder RA. Covalency in Lanthanides. An X-ray Absorption Spectroscopy and Density Functional Theory Study of LnCl6x– (x = 3, 2). J Am Chem Soc 2015; 137:2506-23. [DOI: 10.1021/ja510067v] [Citation(s) in RCA: 143] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Matthias W. Löble
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - Jason M. Keith
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
- Colgate University, Hamilton, New York 13346, United States
| | - Alison B. Altman
- University of California, Berkeley, California 94720, United States
| | | | - Enrique R. Batista
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - Kevin S. Boland
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | | | - David L. Clark
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | | | - Stosh A. Kozimor
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - Richard L. Martin
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - Stefan G. Minasian
- Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Angela C. Olson
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - Brian L. Scott
- Los Alamos National Laboratory, Los
Alamos, New Mexico 87545, United States
| | - David K. Shuh
- Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Tolek Tyliszczak
- Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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37
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Gianetti TL, Nocton G, Minasian SG, Kaltsoyannis N, Kilcoyne ALD, Kozimor SA, Shuh DK, Tyliszczak T, Bergman RG, Arnold J. Electron localization in a mixed-valence diniobium benzene complex. Chem Sci 2014; 6:993-1003. [PMID: 29560186 PMCID: PMC5811154 DOI: 10.1039/c4sc02705a] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2014] [Accepted: 10/17/2014] [Indexed: 01/08/2023] Open
Abstract
One electron oxidation of a neutral diniobium benzene complex leads to a mixed-valence species. Single crystal X-ray diffraction, EPR, L3,2-edge XANES, and DFT indicate that the unpaired electron is localized on one metal center.
Reaction of the neutral diniobium benzene complex {[Nb(BDI)NtBu]2(μ-C6H6)} (BDI = N,N′-diisopropylbenzene-β-diketiminate) with Ag[B(C6F5)4] results in a single electron oxidation to produce a cationic diniobium arene complex, {[Nb(BDI)NtBu]2(μ-C6H6)}{B(C6F5)4}. Investigation of the solid state and solution phase structure using single-crystal X-ray diffraction, cyclic voltammetry, magnetic susceptibility, and multinuclear NMR spectroscopy indicates that the oxidation results in an asymmetric molecule with two chemically inequivalent Nb atoms. Further characterization using density functional theory (DFT) calculations, UV-visible, Nb L3,2-edge X-ray absorption near-edge structure (XANES), and EPR spectroscopies supports assignment of a diniobium complex, in which one Nb atom carries a single unpaired electron that is not largely delocalized on the second Nb atom. During the oxidative transformation, one electron is removed from the δ-bonding HOMO, which causes a destabilization of the molecule and formation of an asymmetric product. Subsequent reactivity studies indicate that the oxidized product allows access to metal-based chemistry with substrates that did not exhibit reactivity with the starting neutral complex.
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Affiliation(s)
- Thomas L Gianetti
- Department of Chemistry , University of California , Berkeley , CA 94720 , USA . ;
| | - Grégory Nocton
- Laboratoire de Chimie Moléculaire , CNRS , Ecole Polytechnique , 91128 Palaiseau , France .
| | - Stefan G Minasian
- Chemical Sciences Division , Lawrence Berkeley National Laboratory , Berkeley , CA 94720 , USA.,Chemistry Division , Los Alamos National Laboratory , Los Alamos , NM 87545 , USA
| | - Nikolas Kaltsoyannis
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H0AJ , UK .
| | - A L David Kilcoyne
- Advanced Light Source , Lawrence Berkeley National Laboratory , Berkeley , CA 94720 , USA
| | - Stosh A Kozimor
- Chemistry Division , Los Alamos National Laboratory , Los Alamos , NM 87545 , USA
| | - David K Shuh
- Chemical Sciences Division , Lawrence Berkeley National Laboratory , Berkeley , CA 94720 , USA
| | - Tolek Tyliszczak
- Advanced Light Source , Lawrence Berkeley National Laboratory , Berkeley , CA 94720 , USA
| | - Robert G Bergman
- Department of Chemistry , University of California , Berkeley , CA 94720 , USA . ;
| | - John Arnold
- Department of Chemistry , University of California , Berkeley , CA 94720 , USA . ;
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Ward MD, Mesbah A, Minasian SG, Shuh DK, Tyliszczak T, Lee M, Choi ES, Lebègue S, Ibers JA. Synthesis and Characterization of Eight Compounds of the MU8Q17 Family: ScU8S17, CoU8S17, NiU8S17, TiU8Se17, VU8Se17, CrU8Se17, CoU8Se17, and NiU8Se17. Inorg Chem 2014; 53:6920-7. [DOI: 10.1021/ic500721d] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Matthew D. Ward
- Department
of Chemistry, Northwestern University, Evanston, Illinois 60208−3113, United States
| | - Adel Mesbah
- Department
of Chemistry, Northwestern University, Evanston, Illinois 60208−3113, United States
| | | | | | | | - Minseong Lee
- Department
of Physics and National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310-3706, United States
| | - Eun Sang Choi
- Department
of Physics and National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310-3706, United States
| | - Sébastien Lebègue
- Laboratoire de
Cristallographie, Résonance Magnétique, et Modélisations
CRM2 (UMR UHP-CNRS 7036), Faculté des Sciences et Techniques,
Université de Lorraine, BP 70239, Boulevard
des Aiguillettes, 54506 Vandoeuvre-lès-Nancy
Cedex, France
| | - James A. Ibers
- Department
of Chemistry, Northwestern University, Evanston, Illinois 60208−3113, United States
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Donahue CM, Lezama Pacheco JS, Keith JM, Daly SR. Sulfur K-edge X-ray absorption spectroscopy and time-dependent density functional theory of arsenic dithiocarbamates. Dalton Trans 2014; 43:9189-201. [DOI: 10.1039/c4dt00078a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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Minasian SG, Keith JM, Batista ER, Boland KS, Clark DL, Kozimor SA, Martin RL, Shuh DK, Tyliszczak T. New evidence for 5f covalency in actinocenes determined from carbon K-edge XAS and electronic structure theory. Chem Sci 2014. [DOI: 10.1039/c3sc52030g] [Citation(s) in RCA: 115] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
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La Pierre HS, Minasian SG, Abubekerov M, Kozimor SA, Shuh DK, Tyliszczak T, Arnold J, Bergman RG, Toste FD. Vanadium Bisimide Bonding Investigated by X-ray Crystallography, 51V and 13C Nuclear Magnetic Resonance Spectroscopy, and V L3,2-Edge X-ray Absorption Near-Edge Structure Spectroscopy. Inorg Chem 2013; 52:11650-60. [DOI: 10.1021/ic4020543] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Henry S. La Pierre
- Department
of Chemistry, University of California, Berkeley, California 94720-1460, United States
| | - Stefan G. Minasian
- Inorganic,
Isotope and Actinide Chemistry, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
- Chemical
Sciences Division and Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Mark Abubekerov
- Department
of Chemistry, University of California, Berkeley, California 94720-1460, United States
| | - Stosh A. Kozimor
- Inorganic,
Isotope and Actinide Chemistry, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - David K. Shuh
- Chemical
Sciences Division and Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Tolek Tyliszczak
- Chemical
Sciences Division and Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - John Arnold
- Department
of Chemistry, University of California, Berkeley, California 94720-1460, United States
| | - Robert G. Bergman
- Department
of Chemistry, University of California, Berkeley, California 94720-1460, United States
| | - F. Dean Toste
- Department
of Chemistry, University of California, Berkeley, California 94720-1460, United States
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