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Zhou H, Zhang J, Bai L, Liu J, Li H, Hua J, Luo S. Chemical Structure Diversity and Extensive Biological Functions of Specialized Metabolites in Rice. Int J Mol Sci 2023; 24:17053. [PMID: 38069376 PMCID: PMC10707428 DOI: 10.3390/ijms242317053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Revised: 11/25/2023] [Accepted: 11/29/2023] [Indexed: 12/18/2023] Open
Abstract
Rice (Oryza sativa L.) is thought to have been domesticated many times independently in China and India, and many modern cultivars are available. All rice tissues are rich in specialized metabolites (SPMs). To date, a total of 181 terpenoids, 199 phenolics, 41 alkaloids, and 26 other types of compounds have been detected in rice. Some volatile sesquiterpenoids released by rice are known to attract the natural enemies of rice herbivores, and play an indirect role in defense. Momilactone, phytocassane, and oryzalic acid are the most common diterpenoids found in rice, and are found at all growth stages. Indolamides, including serotonin, tryptamine, and N-benzoylserotonin, are the main rice alkaloids. The SPMs mainly exhibit defense functions with direct roles in resisting herbivory and pathogenic infections. In addition, phenolics are also important in indirect defense, and enhance wax deposition in leaves and promote the lignification of stems. Meanwhile, rice SPMs also have allelopathic effects and are crucial in the regulation of the relationships between different plants or between plants and microorganisms. In this study, we reviewed the various structures and functions of rice SPMs. This paper will provide useful information and methodological resources to inform the improvement of rice resistance and the promotion of the rice industry.
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Affiliation(s)
| | | | | | | | | | - Juan Hua
- Research Center of Protection and Utilization of Plant Resources, College of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang 110866, China (J.L.)
| | - Shihong Luo
- Research Center of Protection and Utilization of Plant Resources, College of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang 110866, China (J.L.)
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Role of Tocochromanols in Tolerance of Cereals to Biotic Stresses: Specific Focus on Pathogenic and Toxigenic Fungal Species. Int J Mol Sci 2022; 23:ijms23169303. [PMID: 36012567 PMCID: PMC9408828 DOI: 10.3390/ijms23169303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 08/16/2022] [Accepted: 08/16/2022] [Indexed: 11/16/2022] Open
Abstract
Fungal pathogens capable of producing mycotoxins are one of the main threats to the cultivation of cereals and the safety of the harvested kernels. Improving the resistance of crops to fungal disease and accumulation of mycotoxins is therefore a crucial issue. Achieving this goal requires a deep understanding of plant defense mechanisms, most of them involving specialized metabolites. However, while numerous studies have addressed the contribution of phenylpropanoids and carotenoids to plant chemical defense, very few have dealt with tocochromanols. Tocochromanols, which encompass tocopherols and tocotrienols and constitute the vitamin E family, are widely distributed in cereal kernels; their biosynthetic pathway has been extensively studied with the aim to enrich plant oils and combat vitamin E deficiency in humans. Here we provide strong assumptions arguing in favor of an involvement of tocochromanols in plant–fungal pathogen interactions. These assumptions are based on both direct effects resulting from their capacity to scavenge reactive oxygen species, including lipid peroxyl radicals, on their potential to inhibit fungal growth and mycotoxin yield, and on more indirect effects mainly based on their role in plant protection against abiotic stresses.
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Tiozon RJN, Fernie AR, Sreenivasulu N. Meeting human dietary vitamin requirements in the staple rice via strategies of biofortification and post-harvest fortification. Trends Food Sci Technol 2021. [DOI: 10.1016/j.tifs.2021.01.023] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
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4
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Burgos E, Belen De Luca M, Diouf I, de Haro LA, Albert E, Sauvage C, Tao ZJ, Bermudez L, Asís R, Nesi AN, Matringe M, Bréhélin C, Guiraud T, Ferrand C, Atienza I, Jorly J, Mauxion JP, Baldet P, Fernie AR, Quadrana L, Rothan C, Causse M, Carrari F. Validated MAGIC and GWAS population mapping reveals the link between vitamin E content and natural variation in chorismate metabolism in tomato. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 105:907-923. [PMID: 33179365 DOI: 10.1111/tpj.15077] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Accepted: 10/27/2020] [Indexed: 05/21/2023]
Abstract
Tocochromanols constitute the different forms of vitamin E (VTE), essential components of the human diet, and display a high membrane protectant activity. By combining interval mapping and genome-wide association studies (GWAS), we unveiled the genetic determinants of tocochromanol accumulation in tomato (Solanum lycopersicum) fruits. To enhance the nutritional value of this highly consumed vegetable, we dissected the natural intraspecific variability of tocochromanols in tomato fruits and genetically engineered their biosynthetic pathway. These analyses allowed the identification of a total of 25 quantitative trait loci interspersed across the genome pinpointing the chorismate-tyrosine pathway as a regulatory hub controlling the supply of the aromatic head group for tocochromanol biosynthesis. To validate the link between the chorismate-tyrosine pathway and VTE, we engineered tomato plants to bypass the pathway at the arogenate branch point. Transgenic tomatoes showed moderate increments in tocopherols (up to approximately 20%) and a massive accumulation of tocotrienols (up to approximately 3400%). Gene expression analyses of these plants reveal a trade-off between VTE and natural variation in chorismate metabolism explained by transcriptional reprogramming of specific structural genes of the pathway. By restoring the accumulation of alpha-tocotrienols (α-t3) in fruits, the plants produced here are of high pharmacological and nutritional interest.
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Affiliation(s)
- Estanislao Burgos
- Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE-UBA-CONICET), Universidad de Buenos Aires, Ciudad Universitaria, Buenos Aires, C1428EHA, Argentina
| | - Maria Belen De Luca
- Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE-UBA-CONICET), Universidad de Buenos Aires, Ciudad Universitaria, Buenos Aires, C1428EHA, Argentina
| | - Isidore Diouf
- INRAE, Génétique et Amélioration des Fruits et Légumes, Centre de Recherche PACA, 67 Allée des Chênes, Domaine Saint Maurice CS60094, Montfavet, 84143, France
| | - Luis A de Haro
- Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE-UBA-CONICET), Universidad de Buenos Aires, Ciudad Universitaria, Buenos Aires, C1428EHA, Argentina
| | - Elise Albert
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, USA
| | | | - Zhao J Tao
- INRAE, Génétique et Amélioration des Fruits et Légumes, Centre de Recherche PACA, 67 Allée des Chênes, Domaine Saint Maurice CS60094, Montfavet, 84143, France
| | - Luisa Bermudez
- Instituto de Biotecnología, Instituto Nacional de Tecnología Agropecuaria, and Consejo Nacional de Investigaciones Científicas y Técnicas, PO Box 25, Castelar, B1712WAA, Argentina
- Facultad de Agronomía, Cátedra de Genética, Universidad de Buenos Aires, Buenos Aires, Argentina
| | - Ramon Asís
- CIBICI, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Córdoba, CC, 5000, Argentina
| | - Adriano N Nesi
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Michel Matringe
- Laboratoire de Physiologie Cellulaire Végétale, Unité Mixte de Recherche 5168 CNRS-CEA-INRAE, Université Joseph Fourier, CEA Grenoble, PCV, Grenoble Cedex 9, Grenoble, 38054, France
| | - Claire Bréhélin
- Laboratoire de Physiologie Cellulaire Végétale, Unité Mixte de Recherche 5168 CNRS-CEA-INRAE, Université Joseph Fourier, CEA Grenoble, PCV, Grenoble Cedex 9, Grenoble, 38054, France
| | - Thomas Guiraud
- Univ. Bordeaux, Biologie du Fruit et Pathologie, INRAE, Villenave d'OrnoF-33140, Villenave d'Ornon Cedex, UMR 1332, France
| | - Carine Ferrand
- Univ. Bordeaux, Biologie du Fruit et Pathologie, INRAE, Villenave d'OrnoF-33140, Villenave d'Ornon Cedex, UMR 1332, France
| | - Isabelle Atienza
- Univ. Bordeaux, Biologie du Fruit et Pathologie, INRAE, Villenave d'OrnoF-33140, Villenave d'Ornon Cedex, UMR 1332, France
| | - Joana Jorly
- Univ. Bordeaux, Biologie du Fruit et Pathologie, INRAE, Villenave d'OrnoF-33140, Villenave d'Ornon Cedex, UMR 1332, France
| | - Jean P Mauxion
- Univ. Bordeaux, Biologie du Fruit et Pathologie, INRAE, Villenave d'OrnoF-33140, Villenave d'Ornon Cedex, UMR 1332, France
| | - Pierre Baldet
- Univ. Bordeaux, Biologie du Fruit et Pathologie, INRAE, Villenave d'OrnoF-33140, Villenave d'Ornon Cedex, UMR 1332, France
| | - Alisdair R Fernie
- Institute of Molecular Plant Physiology, Max-Planck, Am Muehlenberg 1, Potsdam-Golm, 14476, Germany
| | - Leandro Quadrana
- Centre National de la Recherche Scientifique (CNRS), Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, Institut National de la Santé et de la Recherche Médicale (INSERM), Paris, F-75005, France
| | - Christophe Rothan
- Univ. Bordeaux, Biologie du Fruit et Pathologie, INRAE, Villenave d'OrnoF-33140, Villenave d'Ornon Cedex, UMR 1332, France
| | - Mathilde Causse
- INRAE, Génétique et Amélioration des Fruits et Légumes, Centre de Recherche PACA, 67 Allée des Chênes, Domaine Saint Maurice CS60094, Montfavet, 84143, France
| | - Fernando Carrari
- Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE-UBA-CONICET), Universidad de Buenos Aires, Ciudad Universitaria, Buenos Aires, C1428EHA, Argentina
- Facultad de Agronomía, Cátedra de Genética, Universidad de Buenos Aires, Buenos Aires, Argentina
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Mahalingam R, Sallam AH, Steffenson BJ, Fiedler JD, Walling JG. Genome-wide association analysis of natural variation in seed tocochromanols of barley. THE PLANT GENOME 2020; 13:e20039. [PMID: 33217201 DOI: 10.1002/tpg2.20039] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2020] [Accepted: 06/06/2020] [Indexed: 06/11/2023]
Abstract
Tocochromanols (tocols for short), commonly called Vitamin E, are lipid-soluble plant antioxidants vital for regulating lipid peroxidation in chloroplasts and seeds. Barley (Hordeum vulgare L.) seeds contain all eight different isoforms of tocols; however, the extent of natural variation in their composition and their underlying genetic basis is not known. Tocol levels in barley seeds were quantified in diverse H. vulgare panels comprising 297 wild lines from a diversity panel and 160 cultivated spring-type accessions from the mini-core panel representing the genetic diversity of the USDA barley germplasm collection. Significant differences were observed in the concentration of tocols between the two panels. To identify the genes associated with tocols, genome-wide association analysis was conducted with single nucleotide polymorphisms (SNPs) from Illumina arrays for the mini-core panel and genotyping-by-sequencing for the wild barley panel. Forty unique SNPs in the wild barley and 27 SNPs in the mini-core panel were significantly associated with various tocols. Marker-trait associations (MTAs) were identified on chromosomes 1, 6, and 7 for key genes in the tocol biosynthesis pathway, which have also been reported in other studies. Several novel MTAs were identified on chromosomes 2, 3, 4 and 5 and were found to be in proximity to genes involved in the generation of precursor metabolites required for tocol biosynthesis. This study provides a valuable resource for barley breeding programs targeting specific isoforms of seed tocols and for investigating the physiological roles of these metabolites in seed longevity, dormancy, and germination.
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Affiliation(s)
| | - Ahmad H Sallam
- Department of Plant Pathology, Univ. of Minnesota, St. Paul, MN, 55108, USA
| | - Brian J Steffenson
- Department of Plant Pathology, Univ. of Minnesota, St. Paul, MN, 55108, USA
| | - Jason D Fiedler
- USDA-ARS, Cereal Crops Research Unit, 1616 Albrecht Blvd, Fargo, ND, 58102, USA
| | - Jason G Walling
- USDA-ARS, Cereal Crops Research Unit, 502 Walnut Street, Madison, WI, 53726, USA
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6
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Lin M, Han P, Li Y, Wang W, Lai D, Zhou L. Quinoa Secondary Metabolites and Their Biological Activities or Functions. Molecules 2019; 24:E2512. [PMID: 31324047 PMCID: PMC6651730 DOI: 10.3390/molecules24132512] [Citation(s) in RCA: 52] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Revised: 07/03/2019] [Accepted: 07/03/2019] [Indexed: 02/07/2023] Open
Abstract
Quinoa (Chenopodium quinoa Willd.) was known as the "golden grain" by the native Andean people in South America, and has been a source of valuable food over thousands of years. It can produce a variety of secondary metabolites with broad spectra of bioactivities. At least 193 secondary metabolites from quinoa have been identified in the past 40 years. They mainly include phenolic acids, flavonoids, terpenoids, steroids, and nitrogen-containing compounds. These metabolites exhibit many physiological functions, such as insecticidal, molluscicidal and antimicrobial activities, as well as various kinds of biological activities such as antioxidant, cytotoxic, anti-diabetic and anti-inflammatory properties. This review focuses on our knowledge of the structures, biological activities and functions of quinoa secondary metabolites. Biosynthesis, development and utilization of the secondary metabolites especially from quinoa bran were prospected.
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Affiliation(s)
- Minyi Lin
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China
| | - Peipei Han
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China
| | - Yuying Li
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China
| | - Weixuan Wang
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China
| | - Daowan Lai
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China
| | - Ligang Zhou
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China.
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Schuy C, Groth J, Ammon A, Eydam J, Baier S, Schweizer G, Hanemann A, Herz M, Voll LM, Sonnewald U. Deciphering the genetic basis for vitamin E accumulation in leaves and grains of different barley accessions. Sci Rep 2019; 9:9470. [PMID: 31263124 PMCID: PMC6602966 DOI: 10.1038/s41598-019-45572-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2018] [Accepted: 06/04/2019] [Indexed: 01/22/2023] Open
Abstract
Tocopherols and tocotrienols, commonly referred to as vitamin E, are essential compounds in food and feed. Due to their lipophilic nature they protect biomembranes by preventing the propagation of lipid-peroxidation especially during oxidative stress. Since their synthesis is restricted to photosynthetic organisms, plant-derived products are the major source of natural vitamin E. In the present study the genetic basis for high vitamin E accumulation in leaves and grains of different barley (Hordeum vulgare L.) accessions was uncovered. A genome wide association study (GWAS) allowed the identification of two genes located on chromosome 7H, homogentisate phytyltransferase (HPT-7H) and homogentisate geranylgeranyltransferase (HGGT) that code for key enzymes controlling the accumulation of tocopherols in leaves and tocotrienols in grains, respectively. Transcript profiling showed a correlation between HPT-7H expression and vitamin E content in leaves. Allele sequencing allowed to decipher the allelic variation of HPT-7H and HGGT genes corresponding to high and low vitamin E contents in the respective tissues. Using the obtained sequence information molecular markers have been developed which can be used to assist smart breeding of high vitamin E barley varieties. This will facilitate the selection of genotypes more tolerant to oxidative stress and producing high-quality grains.
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Affiliation(s)
- Christian Schuy
- Division of Biochemistry, Department of Biology, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstr. 5, D-91058, Erlangen, Germany.
| | - Jennifer Groth
- Institut für Pflanzenbau und Pflanzenzüchtung, Bavarian State Research Center for Agriculture, Am Gereuth 8, D-85354, Freising, Germany
| | - Alexandra Ammon
- Division of Biochemistry, Department of Biology, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstr. 5, D-91058, Erlangen, Germany
| | - Julia Eydam
- Division of Biochemistry, Department of Biology, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstr. 5, D-91058, Erlangen, Germany
| | - Steffen Baier
- Division of Biochemistry, Department of Biology, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstr. 5, D-91058, Erlangen, Germany
- Saatzucht Josef Breun GmbH & Co. KG, Amselweg 1, D-91074, Herzogenaurach, Germany
| | - Günther Schweizer
- Institut für Pflanzenbau und Pflanzenzüchtung, Bavarian State Research Center for Agriculture, Am Gereuth 8, D-85354, Freising, Germany
| | - Anja Hanemann
- Saatzucht Josef Breun GmbH & Co. KG, Amselweg 1, D-91074, Herzogenaurach, Germany
| | - Markus Herz
- Institut für Pflanzenbau und Pflanzenzüchtung, Bavarian State Research Center for Agriculture, Am Gereuth 8, D-85354, Freising, Germany
| | - Lars M Voll
- Division of Biochemistry, Department of Biology, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstr. 5, D-91058, Erlangen, Germany
- Division of Plant Physiology, Department Biology, Philipps-University Marburg, Karl-von-Frisch-Str. 8, D-35043, Marburg, Germany
| | - Uwe Sonnewald
- Division of Biochemistry, Department of Biology, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstr. 5, D-91058, Erlangen, Germany
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Wang W, Li Y, Dang P, Zhao S, Lai D, Zhou L. Rice Secondary Metabolites: Structures, Roles, Biosynthesis, and Metabolic Regulation. Molecules 2018; 23:E3098. [PMID: 30486426 PMCID: PMC6320963 DOI: 10.3390/molecules23123098] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2018] [Revised: 11/21/2018] [Accepted: 11/22/2018] [Indexed: 02/05/2023] Open
Abstract
Rice (Oryza sativa L.) is an important food crop providing energy and nutrients for more than half of the world population. It produces vast amounts of secondary metabolites. At least 276 secondary metabolites from rice have been identified in the past 50 years. They mainly include phenolic acids, flavonoids, terpenoids, steroids, alkaloids, and their derivatives. These metabolites exhibit many physiological functions, such as regulatory effects on rice growth and development, disease-resistance promotion, anti-insect activity, and allelopathic effects, as well as various kinds of biological activities such as antimicrobial, antioxidant, cytotoxic, and anti-inflammatory properties. This review focuses on our knowledge of the structures, biological functions and activities, biosynthesis, and metabolic regulation of rice secondary metabolites. Some considerations about cheminformatics, metabolomics, genetic transformation, production, and applications related to the secondary metabolites from rice are also discussed.
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Affiliation(s)
- Weixuan Wang
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China.
| | - Yuying Li
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China.
| | - Pengqin Dang
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China.
| | - Siji Zhao
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China.
| | - Daowan Lai
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China.
| | - Ligang Zhou
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China.
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Sookwong P, Mahatheeranont S. Some Strategies for Utilization of Rice Bran Functional Lipids and Phytochemicals. J Oleo Sci 2018; 67:669-678. [PMID: 29760331 DOI: 10.5650/jos.ess17257] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Rice bran contains a great amount of functional lipids and phytochemicals including γ-oryzanols, tocotrienols, and tocopherols. However, utilization of those compounds is limited and needs some proven guidelines for better implementation. We introduce some effective strategies for the utilization of rice functional lipids, including an introduction of pigmented rice varieties for better bioactive compounds, biofortification of rice tocotrienols, plasma technology for improving rice phytochemicals, supercritical CO2 extraction of high quality rice bran oil, and an example on the development of tocotrienol-fortified foods.
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Affiliation(s)
- Phumon Sookwong
- Rice and Cereal Chemistry Research Laboratory, Department of Chemistry, Faculty of Science, Chiang Mai University
| | - Sugunya Mahatheeranont
- Rice and Cereal Chemistry Research Laboratory, Department of Chemistry, Faculty of Science, Chiang Mai University.,Center of Excellence for Innovation in Chemistry, Faculty of Science, Chiang Mai University
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Kimura E, Abe T, Murata K, Kimura T, Otoki Y, Yoshida T, Miyazawa T, Nakagawa K. Identification of OsGGR2, a second geranylgeranyl reductase involved in α-tocopherol synthesis in rice. Sci Rep 2018; 8:1870. [PMID: 29382838 PMCID: PMC5789843 DOI: 10.1038/s41598-018-19527-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Accepted: 01/02/2018] [Indexed: 12/30/2022] Open
Abstract
Tocopherol (Toc) and tocotrienol (T3) are abundant in rice bran. Geranylgeranyl reductase (GGR) is an essential enzyme for Toc production that catalyzes the reduction of geranylgeranyl pyrophosphate and geranylgeranyl-chlorophyll. However, we found that a rice mutant line with inactivated Os02g0744900 (OsGGR1/LYL1/OsChl P) gene produces Toc, suggesting that rice plants may carry another enzyme with GGR activity. Using an RNA-mediated interference technique, we demonstrated that the Os01g0265000 ("OsGGR2") gene product has GGR activity. This result supports the existence of two GGR genes (OsGGR1 and OsGGR2) in rice, in contrast to Arabidopsis thaliana (thale cress) and cyanobacterium Synechocystis that each have only one GGR gene. We also produced rice callus with inactivated OsGGR1 and OsGGR2 that produced T3 but not Toc. Such rice callus could be used as a resource for production of pure T3 for nutraceutical applications.
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Affiliation(s)
- Eiichi Kimura
- National Agricultural Research Center for Tohoku Region, NARO, Morioka, Iwate, 020-0198, Japan
| | - Takumi Abe
- Food and Biodynamic Chemistry Laboratory, Graduate School of Agricultural Science, Tohoku University, Sendai, Miyagi, 980 - 0845, Japan
| | - Kazumasa Murata
- Agricultural Research Institute, Toyama Prefectural Agricultural, Forestry and Fisheries Research Center, Toyama, Toyama, 939-8153, Japan
| | - Toshiyuki Kimura
- Division of Food Function Research, Food Research Institute, NARO, Tsukuba, Ibaraki, 305-8642, Japan
| | - Yurika Otoki
- Food and Biodynamic Chemistry Laboratory, Graduate School of Agricultural Science, Tohoku University, Sendai, Miyagi, 980 - 0845, Japan
| | - Taiji Yoshida
- National Agricultural Research Center for Tohoku Region, NARO, Morioka, Iwate, 020-0198, Japan
| | - Teruo Miyazawa
- Food and Biotechnology Innovation Project, New Industry Creation Hatchery Center (NICHe), Tohoku University, Sendai, Miyagi, 980-8579, Japan
| | - Kiyotaka Nakagawa
- Food and Biodynamic Chemistry Laboratory, Graduate School of Agricultural Science, Tohoku University, Sendai, Miyagi, 980 - 0845, Japan.
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11
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Wang XQ, Yoon MY, He Q, Kim TS, Tong W, Choi BW, Lee YS, Park YJ. Natural variations in OsγTMT contribute to diversity of the α-tocopherol content in rice. Mol Genet Genomics 2015; 290:2121-35. [DOI: 10.1007/s00438-015-1059-x] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2014] [Accepted: 04/29/2015] [Indexed: 11/27/2022]
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12
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Oliver RE, Islamovic E, Obert DE, Wise ML, Herrin LL, Hang A, Harrison SA, Ibrahim A, Marshall JM, Miclaus KJ, Lazo GR, Hu G, Jackson EW. Comparative systems biology reveals allelic variation modulating Tocochromanol profiles in Barley (Hordeum vulgare L.). PLoS One 2014; 9:e96276. [PMID: 24820172 PMCID: PMC4018352 DOI: 10.1371/journal.pone.0096276] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2013] [Accepted: 04/06/2014] [Indexed: 12/01/2022] Open
Abstract
Tocochromanols are recognized for nutritional content, plant stress response, and seed longevity. Here we present a systems biological approach to characterize and develop predictive assays for genes affecting tocochromanol variation in barley. Major QTL, detected in three regions of a SNP linkage map, affected multiple tocochromanol forms. Candidate genes were identified through barley/rice orthology and sequenced in genotypes with disparate tocochromanol profiles. Gene-specific markers, designed based on observed polymorphism, mapped to the originating QTL, increasing R2 values at the respective loci. Polymorphism within promoter regions corresponded to motifs known to influence gene expression. Quantitative PCR analysis revealed a trend of increased expression in tissues grown at cold temperatures. These results demonstrate utility of a novel method for rapid gene identification and characterization, and provide a resource for efficient development of barley lines with improved tocochromanol profiles.
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Affiliation(s)
- Rebekah E. Oliver
- Department of Plant Sciences, North Dakota State University, Fargo, North Dakota, United States of America, formerly USDA-ARS, Small Grains and Potato Germplasm Research Unit, Aberdeen, Idaho, United States of America
| | - Emir Islamovic
- USDA-ARS, Small Grains and Potato Germplasm Research Unit, Aberdeen, Idaho, United States of America
| | - Donald E. Obert
- Limagrain Cereal Seeds, Battle Ground, Indiana, United States of America, formerly USDA-ARS, Small Grains and Potato Germplasm Research Unit, Aberdeen, Idaho, United States of America
| | - Mitchell L. Wise
- USDA-ARS, Cereal Crops Research Unit, Madison, Wisconsin, United States of America
| | - Lauri L. Herrin
- USDA-ARS, Cereal Crops Research Unit, Madison, Wisconsin, United States of America
| | - An Hang
- USDA-ARS, Small Grains and Potato Germplasm Research Unit, Aberdeen, Idaho, United States of America
| | - Stephen A. Harrison
- School of Plant, Environmental and Soil Sciences, Louisiana State University, Baton Rouge, Louisiana, United States of America
| | - Amir Ibrahim
- Department of Soil and Crop Sciences, Texas A&M University, College Station, Texas, United States of America
| | - Juliet M. Marshall
- Department of Plant, Soil, and Entomological Sciences, University of Idaho Research and Extension, Idaho Falls, Idaho, United States of America
| | - Kelci J. Miclaus
- SAS Institute Inc., JMP Genomics Development, Cary, North Carolina, United States of America
| | - Gerard R. Lazo
- USDA-ARS, Western Regional Research Center, Genomics and Gene Discovery, Albany, California, United States of America
| | - Gongshe Hu
- USDA-ARS, Small Grains and Potato Germplasm Research Unit, Aberdeen, Idaho, United States of America
| | - Eric W. Jackson
- Crop Biosciences, General Mill, Inc., Kannapolis, North Carolina, United States of America, formerly USDA-ARS, Small Grains and Potato Germplasm Research Unit, Aberdeen, Idaho, United States of America
- * E-mail:
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13
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Genome-wide association study and pathway-level analysis of tocochromanol levels in maize grain. G3-GENES GENOMES GENETICS 2013; 3:1287-99. [PMID: 23733887 PMCID: PMC3737168 DOI: 10.1534/g3.113.006148] [Citation(s) in RCA: 108] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Tocopherols and tocotrienols, collectively known as tocochromanols, are the major lipid-soluble antioxidants in maize (Zea mays L.) grain. Given that individual tocochromanols differ in their degree of vitamin E activity, variation for tocochromanol composition and content in grain from among diverse maize inbred lines has important nutritional and health implications for enhancing the vitamin E and antioxidant contents of maize-derived foods through plant breeding. Toward this end, we conducted a genome-wide association study of six tocochromanol compounds and 14 of their sums, ratios, and proportions with a 281 maize inbred association panel that was genotyped for 591,822 SNP markers. In addition to providing further insight into the association between ZmVTE4 (γ-tocopherol methyltransferase) haplotypes and α-tocopherol content, we also detected a novel association between ZmVTE1 (tocopherol cyclase) and tocotrienol composition. In a pathway-level analysis, we assessed the genetic contribution of 60 a priori candidate genes encoding the core tocochromanol pathway (VTE genes) and reactions for pathways supplying the isoprenoid tail and aromatic head group of tocochromanols. This analysis identified two additional genes, ZmHGGT1 (homogentisate geranylgeranyltransferase) and one prephenate dehydratase parolog (of four in the genome) that also modestly contribute to tocotrienol variation in the panel. Collectively, our results provide the most favorable ZmVTE4 haplotype and suggest three new gene targets for increasing vitamin E and antioxidant levels through marker-assisted selection.
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14
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Investigation of tocotrienol biosynthesis in rice (Oryza sativa L.). Food Chem 2013; 140:91-8. [PMID: 23578619 DOI: 10.1016/j.foodchem.2013.02.058] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2012] [Revised: 02/04/2013] [Accepted: 02/13/2013] [Indexed: 11/23/2022]
Abstract
Rice tocotrienol (T3) has gained attention due to its physiological activities (e.g., antiangiogenesis). However, the biosynthetic pathway for T3 production in rice grain has not been well studied. We hypothesized that T3 biosynthesis enzymes and/or precursors play an important role in T3 production in whole grain. This proposal was evaluated in rice (Oryza sativa L.) by PCR and HPLC techniques. Grain tocopherol as well as flag leaf vitamin E levels were also investigated for comparison. For rice samples 14 days after flowering, grain was abundant in T3, but not in flag leaf. Expression of a gene encoding homogentisate geranylgeranyltransferase (HGGT, which has long been believed to be important for T3 production) differed significantly between grain and flag leaf. We then investigated rice samples during the grain maturation period, and found that grain T3 and HGGT levels increased in the early stage and then reached a plateau. T3 precursors such as homogentisate and geranylgeranyl pyrophosphate decreased during maturation. No increase in grain T3 from the middle to late stages of maturation and a decrease in T3 precursors during maturation suggest that HGGT would be an essential, but not limiting factor for T3 biosynthesis, and T3 precursors could regulate the T3 level in grain. The results of this study would be useful for nutraceutical purposes (e.g., development of T3-overproducing rice for the prevention of angiogenic disorders).
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15
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Jeng TL, Shih YJ, Ho PT, Lai CC, Lin YW, Wang CS, Sung JM. γ-Oryzanol, tocol and mineral compositions in different grain fractions of giant embryo rice mutants. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2012; 92:1468-74. [PMID: 22131276 DOI: 10.1002/jsfa.4728] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2011] [Revised: 09/16/2011] [Accepted: 09/27/2011] [Indexed: 05/19/2023]
Abstract
BACKGROUND Rice embryo is concentrated with lipid, protein and some bioactive chemicals. Two rice mutants IR64-GE and TNG71-GE (M7 generation) were characterised by an enlarged embryo compared with their wild types. In the present study, distributions of protein, lipid, total phenolics, γ-oryzanol, tocols and some essential minerals in these two giant embryo mutants and their respective normal embryo wild types IR64 and TNG71 were compared. RESULTS The embryo dry weights of giant embryo mutants IR64-GE and TNG71-GE were 0.92 and 1.32 mg per seed respectively. These values were higher than those of their respective normal embryo genotypes (0.50 and 0.62 mg per seed). Large variations in protein, lipid, phenolic, γ-oryzanol, tocol and minerals levels were found between mutant and wild-type pairs. The brown rice of TNG71-GE had higher total γ-oryzanol (average of 24% increase) and total tocol (average of 75% increase) levels than TNG71, IR64 and IR64-GE. CONCLUSION The embryo and bran parts of giant embryo mutant TNG71-GE were found to be good sources of vitamin E and γ-oryzanol. Therefore it could be used to produce high-value by-products from milled embryo and bran parts and as a genetic resource for rice improvement programmes. TNG71-GE can also be used as a nutrient-fortified rice cultivar.
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Affiliation(s)
- Toong Long Jeng
- Biotechnology Division, Taiwan Agricultural Research Institute, Taichung County, Taiwan
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16
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ZHANG GY, LIU RR, ZHANG P, XU Y, ZHU J, GU MH, LIANG GH, LIU QQ. Variation and Distribution of Vitamin E and Composition in Seeds Among Different Rice Varieties. ACTA ACUST UNITED AC 2012. [DOI: 10.1016/s1875-2780(11)60098-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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17
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Jeng TL, Ho PT, Shih YJ, Lai CC, Wu MT, Sung JM. Comparisons of protein, lipid, phenolics, γ-oryzanol, vitamin E, and mineral contents in bran layer of sodium azide-induced red rice mutants. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2011; 91:1459-65. [PMID: 21337583 DOI: 10.1002/jsfa.4333] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2010] [Revised: 01/07/2011] [Accepted: 01/10/2011] [Indexed: 05/07/2023]
Abstract
BACKGROUND The bran part of red rice grain is concentrated with many phytochemicals, including proanthocyanidins, oryzanol and vitamin E, that exert beneficial effects on human health, but it contains low levels of essential minerals such as Fe and Zn. In the present study, the protein, lipid, phytochemicals and mineral contents in bran samples were compared among red rice SA-586 and its NaN₃-induced mutants. RESULTS The plant heights of NaN₃-induced mutants were decreased. The contents of protein, lipid, total phenolics, total flavonoids, total anthocyanins, total proanthocyanidins, total γ-oryzanol, total tocopherols and total tocotrienols also varied among the tested mutants. The brans of mutants M-18, M-56 and M-50 contained more proanthocyanidins, γ-oryzanol, vitamin E than that of SA-586, respectively. M-54 accumulated more Fe content (588.7 mg kg⁻¹ bran dry weight) than SA-586 (100.1 mg kg⁻¹ bran dry weight). CONCLUSIONS The brans of M-18, M-50 and M-56 are good sources of proanthocyanidins, vitamin E and γ-oryzanol, respectively, while the bran of M-54 is rich in Fe. Thus these mutants could be used to produce high-value phytochemicals or Fe byproducts from bran during rice grain milling or as genetic resources for rice improvement programs.
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Affiliation(s)
- Toong Long Jeng
- Biotechnology division, Taiwan Agricultural Research Institute, Wufeng, Taichung County, Taiwan, ROC
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Zaima N, Goto-Inoue N, Hayasaka T, Setou M. Application of imaging mass spectrometry for the analysis of Oryza sativa rice. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2010; 24:2723-9. [PMID: 20814978 DOI: 10.1002/rcm.4693] [Citation(s) in RCA: 80] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Rice is one of the most important food crops in the world and new varieties have been bred for specific purposes, such as the development of drought-resistance, or the enrichment of functional food factors. The localization and composition of metabolites in such new varieties must be investigated because all artificial interventions are expected to change the metabolites of rice. Imaging mass spectrometry using matrix-assisted laser desorption/ionization (MALDI-IMS) is a suitable tool for investigating the localization and composition of metabolites; however, suitable methodologies for the MALDI-IMS analysis of rice have not yet been established. In this study, we optimized the methods for analyzing rice grains by MALDI-IMS using adhesive film and found the characteristic distribution of metabolites in rice. Lysophosphatidylcholine (LPC) was localized in the endosperm. Phosphatidylcholine (PC), gamma-oryzanol and phytic acid were localized in the bran (germ and seed coat), and alpha-tocopherol was distributed in the germ (especially in the scutellum). In addition, MALDI-IMS revealed the LPC and PC composition of the rice samples. The LPC composition, LPC (1-acyl 16:0), LPC (1-acyl 18:2), LPC (1-acyl 18:1) and LPC (1-acyl 18:0), was 59.4 +/- 4.5%, 19.6 +/- 2.5%, 14.2 +/- 4.5% and 6.8 +/- 1.4%. The PC composition, PC (diacyl 16:0/18:2), PC (diacyl 16:0/18:1), PC (diacyl 18:1/18:3), PC (diacyl 18:1/18:2) and PC (diacyl 18:1/18:2), was 19.6 +/- 1.0%, 21.0 +/- 1.0%, 15.0 +/- 1.4%, 26.7 +/- 0.7% and 17.8 +/- 1.9%. This approach can be applied to the assessment of metabolites not only in rice, but also in other foods for which the preparation of sections is a challenging task.
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Affiliation(s)
- Nobuhiro Zaima
- Department of Molecular Anatomy, Hamamatsu University School of Medicine, 1-20-1 Handayama, Higashi-ku, Hamamatsu, Shizuoka 431-3192, Japan.
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