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Deng X, Liu YX, Yang ZZ, Zhao YF, Xu YT, Fu MY, Shen Y, Qu K, Guan Z, Tong WY, Zhang YY, Chen BB, Zhong N, Xiang PH, Duan CG. Spatial evolution of the proton-coupled Mott transition in correlated oxides for neuromorphic computing. SCIENCE ADVANCES 2024; 10:eadk9928. [PMID: 38820158 PMCID: PMC11141630 DOI: 10.1126/sciadv.adk9928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 04/29/2024] [Indexed: 06/02/2024]
Abstract
The proton-electron coupling effect induces rich spectrums of electronic states in correlated oxides, opening tempting opportunities for exploring novel devices with multifunctions. Here, via modest Pt-aided hydrogen spillover at room temperature, amounts of protons are introduced into SmNiO3-based devices. In situ structural characterizations together with first-principles calculation reveal that the local Mott transition is reversibly driven by migration and redistribution of the predoped protons. The accompanying giant resistance change results in excellent memristive behaviors under ultralow electric fields. Hierarchical tree-like memory states, an instinct displayed in bio-synapses, are further realized in the devices by spatially varying the proton concentration with electric pulses, showing great promise in artificial neural networks for solving intricate problems. Our research demonstrates the direct and effective control of proton evolution using extremely low electric field, offering an alternative pathway for modifying the functionalities of correlated oxides and constructing low-power consumption intelligent devices and neural network circuits.
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Affiliation(s)
- Xing Deng
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Yu-Xiang Liu
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Zhen-Zhong Yang
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Yi-Feng Zhao
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Ya-Ting Xu
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Meng-Yao Fu
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Yu Shen
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Ke Qu
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Zhao Guan
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Wen-Yi Tong
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Yuan-Yuan Zhang
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Bin-Bin Chen
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
| | - Ni Zhong
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
- Collaborative Innovation Center of Extreme Optics, Shanxi University, Taiyuan, Shanxi 030006, China
| | - Ping-Hua Xiang
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
- Collaborative Innovation Center of Extreme Optics, Shanxi University, Taiyuan, Shanxi 030006, China
| | - Chun-Gang Duan
- Key Laboratory of Polar Materials and Devices (Ministry of Education), Shanghai Center of Brain-Inspired Intelligent Materials and Devices, Department of Electronics, East China Normal University, Shanghai 200241, China
- Collaborative Innovation Center of Extreme Optics, Shanxi University, Taiyuan, Shanxi 030006, China
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2
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Stöckl C, Yang Y, Maass W. Local prediction-learning in high-dimensional spaces enables neural networks to plan. Nat Commun 2024; 15:2344. [PMID: 38490999 PMCID: PMC10943103 DOI: 10.1038/s41467-024-46586-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Accepted: 03/01/2024] [Indexed: 03/18/2024] Open
Abstract
Planning and problem solving are cornerstones of higher brain function. But we do not know how the brain does that. We show that learning of a suitable cognitive map of the problem space suffices. Furthermore, this can be reduced to learning to predict the next observation through local synaptic plasticity. Importantly, the resulting cognitive map encodes relations between actions and observations, and its emergent high-dimensional geometry provides a sense of direction for reaching distant goals. This quasi-Euclidean sense of direction provides a simple heuristic for online planning that works almost as well as the best offline planning algorithms from AI. If the problem space is a physical space, this method automatically extracts structural regularities from the sequence of observations that it receives so that it can generalize to unseen parts. This speeds up learning of navigation in 2D mazes and the locomotion with complex actuator systems, such as legged bodies. The cognitive map learner that we propose does not require a teacher, similar to self-attention networks (Transformers). But in contrast to Transformers, it does not require backpropagation of errors or very large datasets for learning. Hence it provides a blue-print for future energy-efficient neuromorphic hardware that acquires advanced cognitive capabilities through autonomous on-chip learning.
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Affiliation(s)
- Christoph Stöckl
- Institute of Theoretical Computer Science, Graz University of Technology, 8010, Graz, Austria
| | - Yukun Yang
- Institute of Theoretical Computer Science, Graz University of Technology, 8010, Graz, Austria
| | - Wolfgang Maass
- Institute of Theoretical Computer Science, Graz University of Technology, 8010, Graz, Austria.
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3
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Sagiv Y, Akam T, Witten IB, Daw ND. Prioritizing replay when future goals are unknown. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.29.582822. [PMID: 38496674 PMCID: PMC10942393 DOI: 10.1101/2024.02.29.582822] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/19/2024]
Abstract
Although hippocampal place cells replay nonlocal trajectories, the computational function of these events remains controversial. One hypothesis, formalized in a prominent reinforcement learning account, holds that replay plans routes to current goals. However, recent puzzling data appear to contradict this perspective by showing that replayed destinations lag current goals. These results may support an alternative hypothesis that replay updates route information to build a "cognitive map." Yet no similar theory exists to formalize this view, and it is unclear how such a map is represented or what role replay plays in computing it. We address these gaps by introducing a theory of replay that learns a map of routes to candidate goals, before reward is available or when its location may change. Our work extends the planning account to capture a general map-building function for replay, reconciling it with data, and revealing an unexpected relationship between the seemingly distinct hypotheses.
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Affiliation(s)
- Yotam Sagiv
- Princeton Neuroscience Institute, Princeton University, Princeton, New Jersey, USA
| | - Thomas Akam
- Department of Experimental Psychology, Oxford University, Oxford, UK
| | - Ilana B Witten
- Princeton Neuroscience Institute, Princeton University, Princeton, New Jersey, USA
| | - Nathaniel D Daw
- Princeton Neuroscience Institute, Princeton University, Princeton, New Jersey, USA
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4
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Wientjes S, Holroyd CB. The successor representation subserves hierarchical abstraction for goal-directed behavior. PLoS Comput Biol 2024; 20:e1011312. [PMID: 38377074 PMCID: PMC10906840 DOI: 10.1371/journal.pcbi.1011312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Revised: 03/01/2024] [Accepted: 02/05/2024] [Indexed: 02/22/2024] Open
Abstract
Humans have the ability to craft abstract, temporally extended and hierarchically organized plans. For instance, when considering how to make spaghetti for dinner, we typically concern ourselves with useful "subgoals" in the task, such as cutting onions, boiling pasta, and cooking a sauce, rather than particulars such as how many cuts to make to the onion, or exactly which muscles to contract. A core question is how such decomposition of a more abstract task into logical subtasks happens in the first place. Previous research has shown that humans are sensitive to a form of higher-order statistical learning named "community structure". Community structure is a common feature of abstract tasks characterized by a logical ordering of subtasks. This structure can be captured by a model where humans learn predictions of upcoming events multiple steps into the future, discounting predictions of events further away in time. One such model is the "successor representation", which has been argued to be useful for hierarchical abstraction. As of yet, no study has convincingly shown that this hierarchical abstraction can be put to use for goal-directed behavior. Here, we investigate whether participants utilize learned community structure to craft hierarchically informed action plans for goal-directed behavior. Participants were asked to search for paintings in a virtual museum, where the paintings were grouped together in "wings" representing community structure in the museum. We find that participants' choices accord with the hierarchical structure of the museum and that their response times are best predicted by a successor representation. The degree to which the response times reflect the community structure of the museum correlates with several measures of performance, including the ability to craft temporally abstract action plans. These results suggest that successor representation learning subserves hierarchical abstractions relevant for goal-directed behavior.
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Affiliation(s)
- Sven Wientjes
- Department of Experimental Psychology, Ghent University, Ghent, Belgium
| | - Clay B. Holroyd
- Department of Experimental Psychology, Ghent University, Ghent, Belgium
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5
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Chen D, Axmacher N, Wang L. Grid codes underlie multiple cognitive maps in the human brain. Prog Neurobiol 2024; 233:102569. [PMID: 38232782 DOI: 10.1016/j.pneurobio.2024.102569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Revised: 01/07/2024] [Accepted: 01/10/2024] [Indexed: 01/19/2024]
Abstract
Grid cells fire at multiple positions that organize the vertices of equilateral triangles tiling a 2D space and are well studied in rodents. The last decade witnessed rapid progress in two other research lines on grid codes-empirical studies on distributed human grid-like representations in physical and multiple non-physical spaces, and cognitive computational models addressing the function of grid cells based on principles of efficient and predictive coding. Here, we review the progress in these fields and integrate these lines into a systematic organization. We also discuss the coordinate mechanisms of grid codes in the human entorhinal cortex and medial prefrontal cortex and their role in neurological and psychiatric diseases.
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Affiliation(s)
- Dong Chen
- CAS Key Laboratory of Mental Health, Institute of Psychology, 100101, Beijing, China; Department of Psychology, University of Chinese Academy of Sciences, 100101, Beijing, China
| | - Nikolai Axmacher
- Department of Neuropsychology, Institute of Cognitive Neuroscience, Faculty of Psychology, Ruhr University Bochum, 44801, Bochum, Germany
| | - Liang Wang
- CAS Key Laboratory of Mental Health, Institute of Psychology, 100101, Beijing, China; Department of Psychology, University of Chinese Academy of Sciences, 100101, Beijing, China.
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6
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Modirshanechi A, Kondrakiewicz K, Gerstner W, Haesler S. Curiosity-driven exploration: foundations in neuroscience and computational modeling. Trends Neurosci 2023; 46:1054-1066. [PMID: 37925342 DOI: 10.1016/j.tins.2023.10.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Revised: 09/28/2023] [Accepted: 10/04/2023] [Indexed: 11/06/2023]
Abstract
Curiosity refers to the intrinsic desire of humans and animals to explore the unknown, even when there is no apparent reason to do so. Thus far, no single, widely accepted definition or framework for curiosity has emerged, but there is growing consensus that curious behavior is not goal-directed but related to seeking or reacting to information. In this review, we take a phenomenological approach and group behavioral and neurophysiological studies which meet these criteria into three categories according to the type of information seeking observed. We then review recent computational models of curiosity from the field of machine learning and discuss how they enable integrating different types of information seeking into one theoretical framework. Combinations of behavioral and neurophysiological studies along with computational modeling will be instrumental in demystifying the notion of curiosity.
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Affiliation(s)
| | - Kacper Kondrakiewicz
- Neuroelectronics Research Flanders (NERF), Leuven, Belgium; VIB, Leuven, Belgium; Department of Neuroscience, KU Leuven, Leuven, Belgium
| | - Wulfram Gerstner
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
| | - Sebastian Haesler
- Neuroelectronics Research Flanders (NERF), Leuven, Belgium; VIB, Leuven, Belgium; Department of Neuroscience, KU Leuven, Leuven, Belgium; Leuven Brain Institute, Leuven, Belgium.
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7
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Hua M, Shi D, Xu W, Zhu L, Hao X, Zhu B, Shu Q, Lozoff B, Geng F, Shao J. Differentiation between fetal and postnatal iron deficiency in altering brain substrates of cognitive control in pre-adolescence. BMC Med 2023; 21:167. [PMID: 37143078 PMCID: PMC10161450 DOI: 10.1186/s12916-023-02850-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Accepted: 03/27/2023] [Indexed: 05/06/2023] Open
Abstract
BACKGROUND Early iron deficiency (ID) is a common risk factor for poorer neurodevelopment, limiting children's potential and contributing to global burden. However, it is unclear how early ID alters the substrate of brain functions supporting high-order cognitive abilities and whether the timing of early ID matters in terms of long-term brain development. This study aimed to examine the effects of ID during fetal or early postnatal periods on brain activities supporting proactive and reactive cognitive control in pre-adolescent children. METHODS Participants were part of a longitudinal cohort enrolled at birth in southeastern China between December 2008 and November 2011. Between July 2019 and October 2021, 115 children aged 8-11 years were invited to participate in this neuroimaging study. Final analyses included 71 children: 20 with fetal ID, 24 with ID at 9 months (postnatal ID), and 27 iron-sufficient at birth and 9 months. Participants performed a computer-based behavioral task in a Magnetic Resonance Imaging scanner to measure proactive and reactive cognitive control. Outcome measures included accuracy, reaction times, and brain activity. Linear mixed modeling and the 3dlme command in Analysis of Functional NeuroImages (AFNI) were separately used to analyze behavioral performance and neuroimaging data. RESULTS Faster responses in proactive vs. reactive conditions indicated that all groups could use proactive or reactive cognitive control according to contextual demands. However, the fetal ID group was lower in general accuracy than the other 2 groups. Per the demands of cues and targets, the iron-sufficient group showed greater activation of wide brain regions in proactive vs. reactive conditions. In contrast, such condition differences were reversed in the postnatal ID group. Condition differences in brain activation, shown in postnatal ID and iron-sufficient groups, were not found in the fetal ID group. This group specifically showed greater activation of brain regions in the reward pathway in proactive vs. reactive conditions. CONCLUSIONS Early ID was associated with altered brain functions supporting proactive and reactive cognitive control in childhood. Alterations differed between fetal and postnatal ID groups. The findings imply that iron supplement alone is insufficient to prevent persisting brain alterations associated with early ID. Intervention strategies in addition to the iron supplement should consider ID timing.
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Affiliation(s)
- Mengdi Hua
- Department of Child Health Care, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, China
| | - Donglin Shi
- Department of Curriculum and Learning Sciences, Zhejiang University, Hangzhou, China
| | - Wenwen Xu
- Department of Curriculum and Learning Sciences, Zhejiang University, Hangzhou, China
| | - Liuyan Zhu
- Department of Child Health Care, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, China
| | - Xiaoxin Hao
- Department of Curriculum and Learning Sciences, Zhejiang University, Hangzhou, China
| | - Bingquan Zhu
- Department of Child Health Care, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, China
| | - Qiang Shu
- Department of Child Health Care, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, China
- National Clinical Research Center for Child Health, Hangzhou, China
| | - Betsy Lozoff
- Department of Pediatrics, University of Michigan, Ann Arbor, MI, USA
| | - Fengji Geng
- Department of Child Health Care, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, China.
- Department of Curriculum and Learning Sciences, Zhejiang University, Hangzhou, China.
- National Clinical Research Center for Child Health, Hangzhou, China.
| | - Jie Shao
- Department of Child Health Care, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, China.
- National Clinical Research Center for Child Health, Hangzhou, China.
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8
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George TM, de Cothi W, Stachenfeld KL, Barry C. Rapid learning of predictive maps with STDP and theta phase precession. eLife 2023; 12:80663. [PMID: 36927826 PMCID: PMC10019887 DOI: 10.7554/elife.80663] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Accepted: 02/26/2023] [Indexed: 03/18/2023] Open
Abstract
The predictive map hypothesis is a promising candidate principle for hippocampal function. A favoured formalisation of this hypothesis, called the successor representation, proposes that each place cell encodes the expected state occupancy of its target location in the near future. This predictive framework is supported by behavioural as well as electrophysiological evidence and has desirable consequences for both the generalisability and efficiency of reinforcement learning algorithms. However, it is unclear how the successor representation might be learnt in the brain. Error-driven temporal difference learning, commonly used to learn successor representations in artificial agents, is not known to be implemented in hippocampal networks. Instead, we demonstrate that spike-timing dependent plasticity (STDP), a form of Hebbian learning, acting on temporally compressed trajectories known as 'theta sweeps', is sufficient to rapidly learn a close approximation to the successor representation. The model is biologically plausible - it uses spiking neurons modulated by theta-band oscillations, diffuse and overlapping place cell-like state representations, and experimentally matched parameters. We show how this model maps onto known aspects of hippocampal circuitry and explains substantial variance in the temporal difference successor matrix, consequently giving rise to place cells that demonstrate experimentally observed successor representation-related phenomena including backwards expansion on a 1D track and elongation near walls in 2D. Finally, our model provides insight into the observed topographical ordering of place field sizes along the dorsal-ventral axis by showing this is necessary to prevent the detrimental mixing of larger place fields, which encode longer timescale successor representations, with more fine-grained predictions of spatial location.
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Affiliation(s)
- Tom M George
- Sainsbury Wellcome Centre for Neural Circuits and Behaviour, University College LondonLondonUnited Kingdom
| | - William de Cothi
- Research Department of Cell and Developmental Biology, University College LondonLondonUnited Kingdom
| | | | - Caswell Barry
- Research Department of Cell and Developmental Biology, University College LondonLondonUnited Kingdom
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9
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Morita K, Shimomura K, Kawaguchi Y. Opponent Learning with Different Representations in the Cortico-Basal Ganglia Circuits. eNeuro 2023; 10:ENEURO.0422-22.2023. [PMID: 36653187 PMCID: PMC9884109 DOI: 10.1523/eneuro.0422-22.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 12/06/2022] [Accepted: 01/03/2023] [Indexed: 01/20/2023] Open
Abstract
The direct and indirect pathways of the basal ganglia (BG) have been suggested to learn mainly from positive and negative feedbacks, respectively. Since these pathways unevenly receive inputs from different cortical neuron types and/or regions, they may preferentially use different state/action representations. We explored whether such a combined use of different representations, coupled with different learning rates from positive and negative reward prediction errors (RPEs), has computational benefits. We modeled animal as an agent equipped with two learning systems, each of which adopted individual representation (IR) or successor representation (SR) of states. With varying the combination of IR or SR and also the learning rates from positive and negative RPEs in each system, we examined how the agent performed in a dynamic reward navigation task. We found that combination of SR-based system learning mainly from positive RPEs and IR-based system learning mainly from negative RPEs could achieve a good performance in the task, as compared with other combinations. In such a combination of appetitive SR-based and aversive IR-based systems, both systems show activities of comparable magnitudes with opposite signs, consistent with the suggested profiles of the two BG pathways. Moreover, the architecture of such a combination provides a novel coherent explanation for the functional significance and underlying mechanism of diverse findings about the cortico-BG circuits. These results suggest that particularly combining different representations with appetitive and aversive learning could be an effective learning strategy in certain dynamic environments, and it might actually be implemented in the cortico-BG circuits.
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Affiliation(s)
- Kenji Morita
- Physical and Health Education, Graduate School of Education, The University of Tokyo, Tokyo 113-0033, Japan
- International Research Center for Neurointelligence (WPI-IRCN), The University of Tokyo, Tokyo 113-0033, Japan
| | - Kanji Shimomura
- Physical and Health Education, Graduate School of Education, The University of Tokyo, Tokyo 113-0033, Japan
- Department of Behavioral Medicine, National Institute of Mental Health, National Center of Neurology and Psychiatry, Kodaira 187-8551, Japan
| | - Yasuo Kawaguchi
- Brain Science Institute, Tamagawa University, Machida 194-8610, Japan
- National Institute for Physiological Sciences (NIPS), Okazaki 444-8787, Japan
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10
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Gu Z, Jamison K, Sabuncu M, Kuceyeski A. Personalized visual encoding model construction with small data. Commun Biol 2022; 5:1382. [PMID: 36528715 PMCID: PMC9759560 DOI: 10.1038/s42003-022-04347-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2022] [Accepted: 12/05/2022] [Indexed: 12/23/2022] Open
Abstract
Quantifying population heterogeneity in brain stimuli-response mapping may allow insight into variability in bottom-up neural systems that can in turn be related to individual's behavior or pathological state. Encoding models that predict brain responses to stimuli are one way to capture this relationship. However, they generally need a large amount of fMRI data to achieve optimal accuracy. Here, we propose an ensemble approach to create encoding models for novel individuals with relatively little data by modeling each subject's predicted response vector as a linear combination of the other subjects' predicted response vectors. We show that these ensemble encoding models trained with hundreds of image-response pairs, achieve accuracy not different from models trained on 20,000 image-response pairs. Importantly, the ensemble encoding models preserve patterns of inter-individual differences in the image-response relationship. We also show the proposed approach is robust against domain shift by validating on data with a different scanner and experimental setup. Additionally, we show that the ensemble encoding models are able to discover the inter-individual differences in various face areas' responses to images of animal vs human faces using a recently developed NeuroGen framework. Our approach shows the potential to use existing densely-sampled data, i.e. large amounts of data collected from a single individual, to efficiently create accurate, personalized encoding models and, subsequently, personalized optimal synthetic images for new individuals scanned under different experimental conditions.
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Affiliation(s)
- Zijin Gu
- grid.5386.8000000041936877XSchool of Electrical and Computer Engineering, Cornell University, Ithaca, NY USA
| | - Keith Jamison
- grid.5386.8000000041936877XDepartment of Radiology, Weill Cornell Medicine, New York, NY USA
| | - Mert Sabuncu
- grid.5386.8000000041936877XSchool of Electrical and Computer Engineering, Cornell University, Ithaca, NY USA ,grid.5386.8000000041936877XDepartment of Radiology, Weill Cornell Medicine, New York, NY USA
| | - Amy Kuceyeski
- grid.5386.8000000041936877XDepartment of Radiology, Weill Cornell Medicine, New York, NY USA
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11
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McNamee DC, Stachenfeld KL, Botvinick MM, Gershman SJ. Compositional Sequence Generation in the Entorhinal-Hippocampal System. ENTROPY (BASEL, SWITZERLAND) 2022; 24:1791. [PMID: 36554196 PMCID: PMC9778317 DOI: 10.3390/e24121791] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Revised: 11/01/2022] [Accepted: 11/29/2022] [Indexed: 06/17/2023]
Abstract
Neurons in the medial entorhinal cortex exhibit multiple, periodically organized, firing fields which collectively appear to form an internal representation of space. Neuroimaging data suggest that this grid coding is also present in other cortical areas such as the prefrontal cortex, indicating that it may be a general principle of neural functionality in the brain. In a recent analysis through the lens of dynamical systems theory, we showed how grid coding can lead to the generation of a diversity of empirically observed sequential reactivations of hippocampal place cells corresponding to traversals of cognitive maps. Here, we extend this sequence generation model by describing how the synthesis of multiple dynamical systems can support compositional cognitive computations. To empirically validate the model, we simulate two experiments demonstrating compositionality in space or in time during sequence generation. Finally, we describe several neural network architectures supporting various types of compositionality based on grid coding and highlight connections to recent work in machine learning leveraging analogous techniques.
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Affiliation(s)
- Daniel C. McNamee
- Neuroscience Programme, Champalimaud Research, 1400-038 Lisbon, Portugal
| | | | - Matthew M. Botvinick
- Google DeepMind, London N1C 4DN, UK
- Gatsby Computational Neuroscience Unit, University College London, London W1T 4JG, UK
| | - Samuel J. Gershman
- Department of Psychology and Center for Brain Science, Harvard University, Cambridge, MA 02138, USA
- Center for Brains, Minds and Machines, MIT, Cambridge, MA 02139, USA
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12
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de Cothi W, Nyberg N, Griesbauer EM, Ghanamé C, Zisch F, Lefort JM, Fletcher L, Newton C, Renaudineau S, Bendor D, Grieves R, Duvelle É, Barry C, Spiers HJ. Predictive maps in rats and humans for spatial navigation. Curr Biol 2022; 32:3676-3689.e5. [PMID: 35863351 DOI: 10.1016/j.cub.2022.06.090] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 05/19/2022] [Accepted: 06/29/2022] [Indexed: 11/25/2022]
Abstract
Much of our understanding of navigation comes from the study of individual species, often with specific tasks tailored to those species. Here, we provide a novel experimental and analytic framework integrating across humans, rats, and simulated reinforcement learning (RL) agents to interrogate the dynamics of behavior during spatial navigation. We developed a novel open-field navigation task ("Tartarus maze") requiring dynamic adaptation (shortcuts and detours) to frequently changing obstructions on the path to a hidden goal. Humans and rats were remarkably similar in their trajectories. Both species showed the greatest similarity to RL agents utilizing a "successor representation," which creates a predictive map. Humans also displayed trajectory features similar to model-based RL agents, which implemented an optimal tree-search planning procedure. Our results help refine models seeking to explain mammalian navigation in dynamic environments and highlight the utility of modeling the behavior of different species to uncover the shared mechanisms that support behavior.
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Affiliation(s)
- William de Cothi
- Department of Cell and Developmental Biology, University College London, London, UK; Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK.
| | - Nils Nyberg
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK
| | - Eva-Maria Griesbauer
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK
| | - Carole Ghanamé
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK
| | - Fiona Zisch
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK; The Bartlett School of Architecture, University College London, London, UK
| | - Julie M Lefort
- Department of Cell and Developmental Biology, University College London, London, UK
| | - Lydia Fletcher
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK
| | - Coco Newton
- Department of Clinical Neurosciences, University of Cambridge, Cambridge, UK
| | - Sophie Renaudineau
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK
| | - Daniel Bendor
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK
| | - Roddy Grieves
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK; Department of Psychological and Brain Sciences, Dartmouth College, Hanover, NH, USA
| | - Éléonore Duvelle
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK; Department of Psychological and Brain Sciences, Dartmouth College, Hanover, NH, USA
| | - Caswell Barry
- Department of Cell and Developmental Biology, University College London, London, UK
| | - Hugo J Spiers
- Institute of Behavioral Neuroscience, Department of Experimental Psychology, Division of Psychology and Language Sciences, University College London, London, UK.
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13
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Castro-Rodrigues P, Akam T, Snorasson I, Camacho M, Paixão V, Maia A, Barahona-Corrêa JB, Dayan P, Simpson HB, Costa RM, Oliveira-Maia AJ. Explicit knowledge of task structure is a primary determinant of human model-based action. Nat Hum Behav 2022; 6:1126-1141. [PMID: 35589826 DOI: 10.1038/s41562-022-01346-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Revised: 03/19/2022] [Accepted: 03/31/2022] [Indexed: 11/09/2022]
Abstract
Explicit information obtained through instruction profoundly shapes human choice behaviour. However, this has been studied in computationally simple tasks, and it is unknown how model-based and model-free systems, respectively generating goal-directed and habitual actions, are affected by the absence or presence of instructions. We assessed behaviour in a variant of a computationally more complex decision-making task, before and after providing information about task structure, both in healthy volunteers and in individuals suffering from obsessive-compulsive or other disorders. Initial behaviour was model-free, with rewards directly reinforcing preceding actions. Model-based control, employing predictions of states resulting from each action, emerged with experience in a minority of participants, and less in those with obsessive-compulsive disorder. Providing task structure information strongly increased model-based control, similarly across all groups. Thus, in humans, explicit task structural knowledge is a primary determinant of model-based reinforcement learning and is most readily acquired from instruction rather than experience.
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Affiliation(s)
- Pedro Castro-Rodrigues
- Champalimaud Clinical Centre, Champalimaud Foundation, Lisbon, Portugal.,Champalimaud Research, Champalimaud Foundation, Lisbon, Portugal.,NOVA Medical School, NMS, Universidade Nova de Lisboa, Lisbon, Portugal.,Centro Hospitalar Psiquiátrico de Lisboa, Lisbon, Portugal
| | - Thomas Akam
- Champalimaud Research, Champalimaud Foundation, Lisbon, Portugal.,Department of Experimental Psychology, University of Oxford, Oxford, UK
| | - Ivar Snorasson
- Center for Obsessive-Compulsive & Related Disorders, New York State Psychiatric Institute, New York, NY, USA
| | - Marta Camacho
- Champalimaud Clinical Centre, Champalimaud Foundation, Lisbon, Portugal.,Champalimaud Research, Champalimaud Foundation, Lisbon, Portugal.,John Van Geest Center for Brain Repair, University of Cambridge, Cambridge, UK
| | - Vitor Paixão
- Champalimaud Research, Champalimaud Foundation, Lisbon, Portugal
| | - Ana Maia
- Champalimaud Clinical Centre, Champalimaud Foundation, Lisbon, Portugal.,Champalimaud Research, Champalimaud Foundation, Lisbon, Portugal.,NOVA Medical School, NMS, Universidade Nova de Lisboa, Lisbon, Portugal.,Department of Psychiatry and Mental Health, Centro Hospitalar de Lisboa Ocidental, Lisbon, Portugal
| | - J Bernardo Barahona-Corrêa
- Champalimaud Clinical Centre, Champalimaud Foundation, Lisbon, Portugal.,Champalimaud Research, Champalimaud Foundation, Lisbon, Portugal.,NOVA Medical School, NMS, Universidade Nova de Lisboa, Lisbon, Portugal
| | - Peter Dayan
- Max Planck Institute for Biological Cybernetics, Tübingen, Germany.,The University of Tübingen, Tübingen, Germany
| | - H Blair Simpson
- Center for Obsessive-Compulsive & Related Disorders, New York State Psychiatric Institute, New York, NY, USA.,Department of Psychiatry, Columbia University, New York, NY, USA
| | - Rui M Costa
- Champalimaud Research, Champalimaud Foundation, Lisbon, Portugal.,NOVA Medical School, NMS, Universidade Nova de Lisboa, Lisbon, Portugal.,Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Albino J Oliveira-Maia
- Champalimaud Clinical Centre, Champalimaud Foundation, Lisbon, Portugal. .,Champalimaud Research, Champalimaud Foundation, Lisbon, Portugal. .,NOVA Medical School, NMS, Universidade Nova de Lisboa, Lisbon, Portugal.
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14
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Abstract
A hallmark of adaptation in humans and other animals is our ability to control how we think and behave across different settings. Research has characterized the various forms cognitive control can take-including enhancement of goal-relevant information, suppression of goal-irrelevant information, and overall inhibition of potential responses-and has identified computations and neural circuits that underpin this multitude of control types. Studies have also identified a wide range of situations that elicit adjustments in control allocation (e.g., those eliciting signals indicating an error or increased processing conflict), but the rules governing when a given situation will give rise to a given control adjustment remain poorly understood. Significant progress has recently been made on this front by casting the allocation of control as a decision-making problem. This approach has developed unifying and normative models that prescribe when and how a change in incentives and task demands will result in changes in a given form of control. Despite their successes, these models, and the experiments that have been developed to test them, have yet to face their greatest challenge: deciding how to select among the multiplicity of configurations that control can take at any given time. Here, we will lay out the complexities of the inverse problem inherent to cognitive control allocation, and their close parallels to inverse problems within motor control (e.g., choosing between redundant limb movements). We discuss existing solutions to motor control's inverse problems drawn from optimal control theory, which have proposed that effort costs act to regularize actions and transform motor planning into a well-posed problem. These same principles may help shed light on how our brains optimize over complex control configuration, while providing a new normative perspective on the origins of mental effort.
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15
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Du Y, Krakauer JW, Haith AM. The relationship between habits and motor skills in humans. Trends Cogn Sci 2022; 26:371-387. [DOI: 10.1016/j.tics.2022.02.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 02/01/2022] [Accepted: 02/06/2022] [Indexed: 12/18/2022]
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16
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Fine JM, Hayden BY. The whole prefrontal cortex is premotor cortex. Philos Trans R Soc Lond B Biol Sci 2022; 377:20200524. [PMID: 34957853 PMCID: PMC8710885 DOI: 10.1098/rstb.2020.0524] [Citation(s) in RCA: 28] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Accepted: 10/01/2021] [Indexed: 11/12/2022] Open
Abstract
We propose that the entirety of the prefrontal cortex (PFC) can be seen as fundamentally premotor in nature. By this, we mean that the PFC consists of an action abstraction hierarchy whose core function is the potentiation and depotentiation of possible action plans at different levels of granularity. We argue that the apex of the hierarchy should revolve around the process of goal-selection, which we posit is inherently a form of optimization over action abstraction. Anatomical and functional evidence supports the idea that this hierarchy originates on the orbital surface of the brain and extends dorsally to motor cortex. Accordingly, our viewpoint positions the orbitofrontal cortex in a key role in the optimization of goal-selection policies, and suggests that its other proposed roles are aspects of this more general function. Our proposed perspective will reframe outstanding questions, open up new areas of inquiry and align theories of prefrontal function with evolutionary principles. This article is part of the theme issue 'Systems neuroscience through the lens of evolutionary theory'.
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Affiliation(s)
- Justin M. Fine
- Department of Neuroscience, Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN 55455, USA
- Department of Biomedical Engineering, University of Minnesota, Minneapolis, MN 55455, USA
| | - Benjamin Y. Hayden
- Department of Neuroscience, Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN 55455, USA
- Department of Biomedical Engineering, University of Minnesota, Minneapolis, MN 55455, USA
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17
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Abstract
Recent breakthroughs in artificial intelligence (AI) have enabled machines to plan in tasks previously thought to be uniquely human. Meanwhile, the planning algorithms implemented by the brain itself remain largely unknown. Here, we review neural and behavioral data in sequential decision-making tasks that elucidate the ways in which the brain does-and does not-plan. To systematically review available biological data, we create a taxonomy of planning algorithms by summarizing the relevant design choices for such algorithms in AI. Across species, recording techniques, and task paradigms, we find converging evidence that the brain represents future states consistent with a class of planning algorithms within our taxonomy-focused, depth-limited, and serial. However, we argue that current data are insufficient for addressing more detailed algorithmic questions. We propose a new approach leveraging AI advances to drive experiments that can adjudicate between competing candidate algorithms.
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18
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DiTullio RW, Balasubramanian V. Dynamical self-organization and efficient representation of space by grid cells. Curr Opin Neurobiol 2021; 70:206-213. [PMID: 34861597 PMCID: PMC8688296 DOI: 10.1016/j.conb.2021.11.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Accepted: 11/09/2021] [Indexed: 10/19/2022]
Abstract
To plan trajectories and navigate, animals must maintain a mental representation of the environment and their own position within it. This "cognitive map" is thought to be supported in part by the entorhinal cortex, where grid cells are active when an animal occupies the vertices of a scaling hierarchy of periodic lattices of locations in an enclosure. Here, we review computational developments which suggest that the grid cell network is: (a) efficient, providing required spatial resolution with a minimum number of neurons, (b) self-organizing, dynamically coordinating the structure and scale of the responses, and (c) adaptive, re-organizing in response to changes in landmarks and the structure of the boundaries of spaces. We consider these ideas in light of recent discoveries of similar structures in the mental representation of abstract spaces of shapes and smells, and in other brain areas, and highlight promising directions for future research.
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Affiliation(s)
- Ronald W. DiTullio
- David Rittenhouse Laboratories & Computational Neuroscience Initiative, University of Pennsylvania, Philadelphia, PA 19104
| | - Vijay Balasubramanian
- David Rittenhouse Laboratories & Computational Neuroscience Initiative, University of Pennsylvania, Philadelphia, PA 19104
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