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Meng X, Lan S, Chen T, Luo H, Zhu L, Chen N, Liu J, Yang S, Cotman AE, Zhang Q, Fang X. Catalytic Asymmetric Transfer Hydrogenation of Acylboronates: BMIDA as the Privileged Directing Group. J Am Chem Soc 2024. [PMID: 38869937 DOI: 10.1021/jacs.4c05924] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2024]
Abstract
Developing a general, highly efficient, and enantioselective catalytic method for the synthesis of chiral alcohols is still a formidable challenge. We report in this article the asymmetric transfer hydrogenation (ATH) of N-methyliminodiacetyl (MIDA) acylboronates as a general substrate-independent entry to enantioenriched secondary alcohols. ATH of acyl-MIDA-boronates with (het)aryl, alkyl, alkynyl, alkenyl, and carbonyl substituents delivers a variety of enantioenriched α-boryl alcohols. The latter are used in a range of stereospecific transformations based on the boron moiety, enabling the synthesis of carbinols with two closely related α-substituents, which cannot be obtained with high enantioselectivities using direct asymmetric hydrogenation methods, such as the (R)-cloperastine intermediate. Computational studies illustrate that the BMIDA group is a privileged enantioselectivity-directing group in Noyori-Ikariya ATH compared to the conventionally used aryl and alkynyl groups due to the favorable CH-O attractive electrostatic interaction between the η6-arene-CH of the catalyst and the σ-bonded oxygen atoms in BMIDA. The work expands the domain of conventional ATH and shows its huge potential in addressing challenges in symmetric synthesis.
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Affiliation(s)
- Xiangjian Meng
- State Key Laboratory of Structural Chemistry, and Key Laboratory of Coal to Ethylene Glycol and Its Related Technology, Center for Excellence in Molecular Synthesis, Fujian Institute of Research on the Structure of Matter, University of Chinese Academy of Sciences, Fuzhou 350100, China
- Fujian Normal University, Fuzhou 350007, China
| | - Shouang Lan
- State Key Laboratory of Structural Chemistry, and Key Laboratory of Coal to Ethylene Glycol and Its Related Technology, Center for Excellence in Molecular Synthesis, Fujian Institute of Research on the Structure of Matter, University of Chinese Academy of Sciences, Fuzhou 350100, China
| | - Ting Chen
- State Key Laboratory of Structural Chemistry, and Key Laboratory of Coal to Ethylene Glycol and Its Related Technology, Center for Excellence in Molecular Synthesis, Fujian Institute of Research on the Structure of Matter, University of Chinese Academy of Sciences, Fuzhou 350100, China
| | - Haotian Luo
- State Key Laboratory of Structural Chemistry, and Key Laboratory of Coal to Ethylene Glycol and Its Related Technology, Center for Excellence in Molecular Synthesis, Fujian Institute of Research on the Structure of Matter, University of Chinese Academy of Sciences, Fuzhou 350100, China
| | - Lixuan Zhu
- State Key Laboratory of Structural Chemistry, and Key Laboratory of Coal to Ethylene Glycol and Its Related Technology, Center for Excellence in Molecular Synthesis, Fujian Institute of Research on the Structure of Matter, University of Chinese Academy of Sciences, Fuzhou 350100, China
| | - Nanchu Chen
- State Key Laboratory of Structural Chemistry, and Key Laboratory of Coal to Ethylene Glycol and Its Related Technology, Center for Excellence in Molecular Synthesis, Fujian Institute of Research on the Structure of Matter, University of Chinese Academy of Sciences, Fuzhou 350100, China
| | - Jinggong Liu
- Orthopedics Department, Guangdong Provincial Hospital of Traditional Chinese Medicine, Guangzhou 510120, China
| | - Shuang Yang
- State Key Laboratory of Structural Chemistry, and Key Laboratory of Coal to Ethylene Glycol and Its Related Technology, Center for Excellence in Molecular Synthesis, Fujian Institute of Research on the Structure of Matter, University of Chinese Academy of Sciences, Fuzhou 350100, China
| | - Andrej Emanuel Cotman
- Faculty of Pharmacy, University of Ljubljana, Aškerčeva Cesta 7, SI-1000 Ljubljana, Slovenia
| | - Qi Zhang
- Hefei University of Technology, Hefei 230009, China
| | - Xinqiang Fang
- State Key Laboratory of Structural Chemistry, and Key Laboratory of Coal to Ethylene Glycol and Its Related Technology, Center for Excellence in Molecular Synthesis, Fujian Institute of Research on the Structure of Matter, University of Chinese Academy of Sciences, Fuzhou 350100, China
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2
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McGhie L, Marotta A, Loftus PO, Seeberger PH, Funes-Ardoiz I, Molloy JJ. Photogeneration of α-Bimetalloid Radicals via Selective Activation of Multifunctional C1 Units. J Am Chem Soc 2024; 146:15850-15859. [PMID: 38805091 PMCID: PMC11177267 DOI: 10.1021/jacs.4c02261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2024] [Revised: 05/12/2024] [Accepted: 05/14/2024] [Indexed: 05/29/2024]
Abstract
Light-driven strategies that enable the chemoselective activation of a specific bond in multifunctional systems are comparatively underexplored in comparison to transition-metal-based technologies, yet desirable when considering the controlled exploration of chemical space. With the current drive to discover next-generation therapeutics, reaction design that enables the strategic incorporation of an sp3 carbon center, containing multiple synthetic handles for the subsequent exploration of chemical space would be highly enabling. Here, we describe the photoactivation of ambiphilic C1 units to generate α-bimetalloid radicals using only a Lewis base and light source to directly activate the C-I bond. Interception of these transient radicals with various SOMOphiles enables the rapid synthesis of organic scaffolds containing synthetic handles (B, Si, and Ge) for subsequent orthogonal activation. In-depth theoretical and mechanistic studies reveal the prominent role of 2,6-lutidine in forming a photoactive charge transfer complex and in stabilizing in situ generated iodine radicals, as well as the influential role of the boron p-orbital in the activation/weakening of the C-I bond. This simple and efficient methodology enabled expedient access to functionalized 3D frameworks that can be further derivatized using available technologies for C-B and C-Si bond activation.
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Affiliation(s)
- Lewis McGhie
- Department
of Biomolecular Systems, Max-Planck-Institute
of Colloids and Interfaces, Potsdam 14476, Germany
- Department
of Chemistry and Biochemistry, Freie Universität
Berlin, Berlin 14195, Germany
| | - Alessandro Marotta
- Department
of Biomolecular Systems, Max-Planck-Institute
of Colloids and Interfaces, Potsdam 14476, Germany
- Department
of Chemistry and Biochemistry, Freie Universität
Berlin, Berlin 14195, Germany
| | - Patrick O. Loftus
- Department
of Biomolecular Systems, Max-Planck-Institute
of Colloids and Interfaces, Potsdam 14476, Germany
| | - Peter H. Seeberger
- Department
of Biomolecular Systems, Max-Planck-Institute
of Colloids and Interfaces, Potsdam 14476, Germany
- Department
of Chemistry and Biochemistry, Freie Universität
Berlin, Berlin 14195, Germany
| | - Ignacio Funes-Ardoiz
- Department
of Chemistry, Instituto de Investigación Química de
la Universidad de La Rioja (IQUR), Universidad
de La Rioja Madre de Dios 53, Logroño 26004, Spain
| | - John J. Molloy
- Department
of Biomolecular Systems, Max-Planck-Institute
of Colloids and Interfaces, Potsdam 14476, Germany
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3
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Strieth-Kalthoff F, Hao H, Rathore V, Derasp J, Gaudin T, Angello NH, Seifrid M, Trushina E, Guy M, Liu J, Tang X, Mamada M, Wang W, Tsagaantsooj T, Lavigne C, Pollice R, Wu TC, Hotta K, Bodo L, Li S, Haddadnia M, Wołos A, Roszak R, Ser CT, Bozal-Ginesta C, Hickman RJ, Vestfrid J, Aguilar-Granda A, Klimareva EL, Sigerson RC, Hou W, Gahler D, Lach S, Warzybok A, Borodin O, Rohrbach S, Sanchez-Lengeling B, Adachi C, Grzybowski BA, Cronin L, Hein JE, Burke MD, Aspuru-Guzik A. Delocalized, asynchronous, closed-loop discovery of organic laser emitters. Science 2024; 384:eadk9227. [PMID: 38753786 DOI: 10.1126/science.adk9227] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Accepted: 04/05/2024] [Indexed: 05/18/2024]
Abstract
Contemporary materials discovery requires intricate sequences of synthesis, formulation, and characterization that often span multiple locations with specialized expertise or instrumentation. To accelerate these workflows, we present a cloud-based strategy that enabled delocalized and asynchronous design-make-test-analyze cycles. We showcased this approach through the exploration of molecular gain materials for organic solid-state lasers as a frontier application in molecular optoelectronics. Distributed robotic synthesis and in-line property characterization, orchestrated by a cloud-based artificial intelligence experiment planner, resulted in the discovery of 21 new state-of-the-art materials. Gram-scale synthesis ultimately allowed for the verification of best-in-class stimulated emission in a thin-film device. Demonstrating the asynchronous integration of five laboratories across the globe, this workflow provides a blueprint for delocalizing-and democratizing-scientific discovery.
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Affiliation(s)
- Felix Strieth-Kalthoff
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | - Han Hao
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
- Acceleration Consortium, University of Toronto, Toronto, ON, Canada
| | - Vandana Rathore
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Molecule Maker Lab, Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Joshua Derasp
- Department of Chemistry, University of British Columbia, Vancouver, BC, Canada
| | - Théophile Gaudin
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | - Nicholas H Angello
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Molecule Maker Lab, Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Molecule Maker Lab Institute, Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Martin Seifrid
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
- Department of Materials Science and Engineering, North Carolina State University, Raleigh, NC, USA
| | | | - Mason Guy
- Department of Chemistry, University of British Columbia, Vancouver, BC, Canada
| | - Junliang Liu
- Department of Chemistry, University of British Columbia, Vancouver, BC, Canada
| | - Xun Tang
- Center for Organic Photonics and Electronics Research (OPERA), Kyushu University, Fukuoka, Japan
| | - Masashi Mamada
- Center for Organic Photonics and Electronics Research (OPERA), Kyushu University, Fukuoka, Japan
| | - Wesley Wang
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Molecule Maker Lab, Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Molecule Maker Lab Institute, Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Tuul Tsagaantsooj
- Center for Organic Photonics and Electronics Research (OPERA), Kyushu University, Fukuoka, Japan
| | - Cyrille Lavigne
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | - Robert Pollice
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | - Tony C Wu
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | - Kazuhiro Hotta
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
- Mitsubishi Chemical Corporation Science & Innovation Center, Kanagawa, Japan
| | - Leticia Bodo
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
| | - Shangyu Li
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
| | - Mohammad Haddadnia
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Vector Institute for Artificial Intelligence, Toronto, ON, Canada
| | - Agnieszka Wołos
- Allchemy Inc., Highland, IN, USA
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Rafał Roszak
- Allchemy Inc., Highland, IN, USA
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Cher Tian Ser
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | - Carlota Bozal-Ginesta
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
- Catalonia Institute for Energy Research, Barcelona, Spain
| | - Riley J Hickman
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | - Jenya Vestfrid
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | - Andrés Aguilar-Granda
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | | | | | - Wenduan Hou
- School of Chemistry, University of Glasgow, Glasgow, UK
| | - Daniel Gahler
- School of Chemistry, University of Glasgow, Glasgow, UK
| | - Slawomir Lach
- School of Chemistry, University of Glasgow, Glasgow, UK
| | - Adrian Warzybok
- School of Chemistry, University of Glasgow, Glasgow, UK
- Department of Chemical Physics, Jagiellonian University, Krakow, Poland
| | - Oleg Borodin
- School of Chemistry, University of Glasgow, Glasgow, UK
| | | | | | - Chihaya Adachi
- Center for Organic Photonics and Electronics Research (OPERA), Kyushu University, Fukuoka, Japan
| | - Bartosz A Grzybowski
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
- Center for Algorithmic and Robotized Synthesis, Institute for Basic Science, Ulsan, Republic of Korea
- Department of Chemistry, Ulsan Institute of Science and Technology, Ulsan, Republic of Korea
| | - Leroy Cronin
- Acceleration Consortium, University of Toronto, Toronto, ON, Canada
- School of Chemistry, University of Glasgow, Glasgow, UK
| | - Jason E Hein
- Acceleration Consortium, University of Toronto, Toronto, ON, Canada
- Department of Chemistry, University of British Columbia, Vancouver, BC, Canada
- Department of Chemistry, University of Bergen, Bergen, Norway
| | - Martin D Burke
- Acceleration Consortium, University of Toronto, Toronto, ON, Canada
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Molecule Maker Lab, Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Molecule Maker Lab Institute, Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Cancer Center at Illinois, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Alán Aspuru-Guzik
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
- Acceleration Consortium, University of Toronto, Toronto, ON, Canada
- Vector Institute for Artificial Intelligence, Toronto, ON, Canada
- Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Materials Science and Engineering, University of Toronto, Toronto, ON, Canada
- Canadian Institute for Advanced Research (CIFAR), Toronto, ON, Canada
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4
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Xu MY, Jiang WT, Xia MZ, An ZL, Xie XY, Xiao B. Orthogonal sp 3-Ge/B Bimetallic Modules: Enantioselective Construction and Enantiospecific Cross-Coupling. Angew Chem Int Ed Engl 2024; 63:e202317284. [PMID: 38342760 DOI: 10.1002/anie.202317284] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Revised: 12/19/2023] [Accepted: 02/05/2024] [Indexed: 02/13/2024]
Abstract
In this study, a series of enantioenriched sp3-Ge/B bimetallic modules were successfully synthesized via an enantioselective copper-catalyzed hydroboration of carbagermatrane (Ge)-containing alkenes. Orthogonal cross-coupling selectivity under different Pd-catalyzed conditions was achieved in an enantiospecific manner. Notably, the chiral secondary Ge exhibited a remarkable transmetallation ability prior to primary or secondary Bpin. The effectiveness of this Ge/B bimetallic strategy was further demonstrated through the development of new functional small molecules with Aggregation-Induced Emission (AIE) and Circularly Polarized Luminescence (CPL) performance. This represents the first successful example of synthesis of enantioenriched alkylgermanium reagents that permit enantiospecific cross-coupling reactions.
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Affiliation(s)
- Meng-Yu Xu
- Key Laboratory of Green and Precise Synthetic Chemistry and Applications, Ministry of Education, Huaibei Normal University, Huaibei, Anhui, 235000, P. R. China
| | - Wei-Tao Jiang
- Department of Chemistry, University of Science and Technology of China, Hefei, 230026, China
| | - Ming-Zhi Xia
- Key Laboratory of Green and Precise Synthetic Chemistry and Applications, Ministry of Education, Huaibei Normal University, Huaibei, Anhui, 235000, P. R. China
| | - Zi-Long An
- Department of Chemistry, University of Science and Technology of China, Hefei, 230026, China
| | - Xiu-Ying Xie
- Department of Chemistry, University of Science and Technology of China, Hefei, 230026, China
| | - Bin Xiao
- Department of Chemistry, University of Science and Technology of China, Hefei, 230026, China
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5
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Ahrweiler E, Schoetz MD, Singh G, Bindschaedler QP, Sorroche A, Schoenebeck F. Triply Selective & Sequential Diversification at C sp 3: Expansion of Alkyl Germane Reactivity for C-C & C-Heteroatom Bond Formation. Angew Chem Int Ed Engl 2024; 63:e202401545. [PMID: 38386517 DOI: 10.1002/anie.202401545] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Revised: 02/17/2024] [Accepted: 02/22/2024] [Indexed: 02/24/2024]
Abstract
We report the triply selective and sequential diversification of a single Csp 3 carbon carrying Cl, Bpin and GeEt3 for the modular and programmable construction of sp3-rich molecules. Various functionalizations of Csp 3-Cl and Csp 3-BPin (e.g. alkylation, arylation, homologation, amination, hydroxylation) were tolerated by the Csp 3-GeEt3 group. Moreover, the methodological repertoire of alkyl germane functionalization was significantly expanded beyond the hitherto known Giese addition and arylation to alkynylation, alkenylation, cyanation, halogenation, azidation, C-S bond formation as well as the first demonstration of stereo-selective functionalization of a Csp 3-[Ge] bond.
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Affiliation(s)
- Eric Ahrweiler
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany)
| | - Markus D Schoetz
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany)
| | - Gurdeep Singh
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany)
| | - Quentin P Bindschaedler
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany)
| | - Alba Sorroche
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany)
| | - Franziska Schoenebeck
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074, Aachen, Germany)
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6
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Mondal A, Pal D, Phukan HJ, Roy M, Kumar S, Purkayastha S, Guha AK, Srimani D. Manganese Complex Catalyzed Sequential Multi-component Reaction: Enroute to a Quinoline-Derived Azafluorenes. CHEMSUSCHEM 2024; 17:e202301138. [PMID: 38096176 DOI: 10.1002/cssc.202301138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Revised: 11/06/2023] [Indexed: 01/09/2024]
Abstract
The development of innovative synthetic strategies for constructing complex molecular structures is the heart of organic chemistry. This significance of novel reactions or reaction sequences would further enhance if they permitted the synthesis of new classes of structural motifs, which have not been previously created. The research on the synthesis of heterocyclic compounds is one of the most active topics in organic chemistry due to the widespread application of N-heterocycles in life and material science. The development of a new catalytic process that employs first-row transition metals to produce a range of heterocycles from renewable raw materials is considered highly sustainable approach. This would be more advantageous if done in an eco-friendly and atom-efficient manner. Herein we introduce, the synthesis of various new quinoline based azafluorenes via sequential dehydrogenative multicomponent reaction (MCR) followed by C(sp3)-H hydroxylation and annulation. Our newly developed, Mn-complexes have the ability to direct the reaction in order to achieve a high amount of desired functionalized heterocycles while minimizing the possibility of multiple side reactions. We also performed a series of control experiments, hydride trapping experiments, reaction kinetics, catalytic intermediate and DFT studies to comprehend the detailed reaction route and the catalyst's function in the MCR sequence.
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Affiliation(s)
- Avijit Mondal
- Department of Chemistry, Indian Institute of Technology-Guwahati, Kamrup, Assam, 781039, India
| | - Debjyoti Pal
- Department of Chemistry, Indian Institute of Technology-Guwahati, Kamrup, Assam, 781039, India
| | - Hirak Jyoti Phukan
- Department of Chemistry, Indian Institute of Technology-Guwahati, Kamrup, Assam, 781039, India
| | - Mithu Roy
- Department of Chemistry, Indian Institute of Technology-Guwahati, Kamrup, Assam, 781039, India
| | - Saurabh Kumar
- Department of Chemistry, Indian Institute of Technology-Guwahati, Kamrup, Assam, 781039, India
| | | | - Ankur Kanti Guha
- Advanced Computational Chemistry Centre, Cotton University, Guwahati, 781001, India
| | - Dipankar Srimani
- Department of Chemistry, Indian Institute of Technology-Guwahati, Kamrup, Assam, 781039, India
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7
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Matysiak BM, Thomas D, Cronin L. Reaction Kinetics using a Chemputable Framework for Data Collection and Analysis. Angew Chem Int Ed Engl 2024; 63:e202315207. [PMID: 38155102 DOI: 10.1002/anie.202315207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Revised: 12/12/2023] [Accepted: 12/27/2023] [Indexed: 12/30/2023]
Abstract
Automated chemistry platforms have been widely explored, but many focus on fixed tasks for chemical synthesis or analysis. However, a typical synthetic chemistry workflow utilizes both, such as kinetic measurements for reaction development and optimization. Due to their repetitive and time-consuming nature, kinetic measurements are often omitted, which limits the mechanistic investigation of reactions. Herein, we present a "Chemputer" platform with on-line analytics (UV/Vis, NMR) which automates routine kinetic measurements. The system's capabilities are showcased by exploring an inverse electron-demand Diels-Alder using initial rate measurements, a metal complexation using variable time normalization analysis (VTNA), and formation of a series of tosylamide derivatives using Hammett analysis. Over 60 individual experiments are presented which required minimal intervention, highlighting the significant time savings of automation. Owing to the modular design of the platform, which facilitates rapid integration of commercial analytical tools, our approach is widely accessible and adjustable to the reaction under investigation. The platform is operated using the chemical programming language, XDL, hence experimental procedures and results are stored in a precise, computer-readable format. We propose that widespread adoption of this reporting protocol in the chemical community could build a database of validated kinetic data beneficial for Machine Learning.
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Affiliation(s)
| | - Dean Thomas
- School of Chemistry, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Leroy Cronin
- School of Chemistry, University of Glasgow, Glasgow, G12 8QQ, UK
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8
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Yang Y, Tsien J, Dykstra R, Chen SJ, Wang JB, Merchant RR, Hughes JME, Peters BK, Gutierrez O, Qin T. Programmable late-stage functionalization of bridge-substituted bicyclo[1.1.1]pentane bis-boronates. Nat Chem 2024; 16:285-293. [PMID: 37884667 PMCID: PMC10922318 DOI: 10.1038/s41557-023-01342-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Accepted: 09/08/2023] [Indexed: 10/28/2023]
Abstract
Modular functionalization enables versatile exploration of chemical space and has been broadly applied in structure-activity relationship (SAR) studies of aromatic scaffolds during drug discovery. Recently, the bicyclo[1.1.1]pentane (BCP) motif has increasingly received attention as a bioisosteric replacement of benzene rings due to its ability to improve the physicochemical properties of prospective drug candidates, but studying the SARs of C2-substituted BCPs has been heavily restricted by the need for multistep de novo synthesis of each analogue of interest. Here we report a programmable bis-functionalization strategy to enable late-stage sequential derivatization of BCP bis-boronates, opening up opportunities to explore the SARs of drug candidates possessing multisubstituted BCP motifs. Our approach capitalizes on the inherent chemoselectivity exhibited by BCP bis-boronates, enabling highly selective activation and functionalization of bridgehead (C3)-boronic pinacol esters (Bpin), leaving the C2-Bpin intact and primed for subsequent derivatization. These selective transformations of both BCP bridgehead (C3) and bridge (C2) positions enable access to C1,C2-disubstituted and C1,C2,C3-trisubstituted BCPs that encompass previously unexplored chemical space.
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Affiliation(s)
- Yangyang Yang
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
| | - Jet Tsien
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
| | - Ryan Dykstra
- Department of Chemistry and Biochemistry, University of Maryland, College Park, MD, USA
| | - Si-Jie Chen
- Department of Discovery Chemistry, Merck & Co., Inc., South San Francisco, CA, USA
| | - James B Wang
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
| | - Rohan R Merchant
- Department of Discovery Chemistry, Merck & Co., Inc., South San Francisco, CA, USA
| | - Jonathan M E Hughes
- Department of Process Research and Development, Merck & Co., Inc., Rahway, NJ, USA
| | - Byron K Peters
- Department of Process Research and Development, Merck & Co., Inc., Rahway, NJ, USA
| | - Osvaldo Gutierrez
- Department of Chemistry and Biochemistry, University of Maryland, College Park, MD, USA.
- Department of Chemistry, Texas A&M University, College Station, TX, USA.
| | - Tian Qin
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA.
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9
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Klucznik T, Syntrivanis LD, Baś S, Mikulak-Klucznik B, Moskal M, Szymkuć S, Mlynarski J, Gadina L, Beker W, Burke MD, Tiefenbacher K, Grzybowski BA. Computational prediction of complex cationic rearrangement outcomes. Nature 2024; 625:508-515. [PMID: 37967579 PMCID: PMC10864989 DOI: 10.1038/s41586-023-06854-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Accepted: 11/08/2023] [Indexed: 11/17/2023]
Abstract
Recent years have seen revived interest in computer-assisted organic synthesis1,2. The use of reaction- and neural-network algorithms that can plan multistep synthetic pathways have revolutionized this field1,3-7, including examples leading to advanced natural products6,7. Such methods typically operate on full, literature-derived 'substrate(s)-to-product' reaction rules and cannot be easily extended to the analysis of reaction mechanisms. Here we show that computers equipped with a comprehensive knowledge-base of mechanistic steps augmented by physical-organic chemistry rules, as well as quantum mechanical and kinetic calculations, can use a reaction-network approach to analyse the mechanisms of some of the most complex organic transformations: namely, cationic rearrangements. Such rearrangements are a cornerstone of organic chemistry textbooks and entail notable changes in the molecule's carbon skeleton8-12. The algorithm we describe and deploy at https://HopCat.allchemy.net/ generates, within minutes, networks of possible mechanistic steps, traces plausible step sequences and calculates expected product distributions. We validate this algorithm by three sets of experiments whose analysis would probably prove challenging even to highly trained chemists: (1) predicting the outcomes of tail-to-head terpene (THT) cyclizations in which substantially different outcomes are encoded in modular precursors differing in minute structural details; (2) comparing the outcome of THT cyclizations in solution or in a supramolecular capsule; and (3) analysing complex reaction mixtures. Our results support a vision in which computers no longer just manipulate known reaction types1-7 but will help rationalize and discover new, mechanistically complex transformations.
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Affiliation(s)
- Tomasz Klucznik
- Allchemy, Highland, IN, USA
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Leonidas-Dimitrios Syntrivanis
- Roger Adams Laboratory, School of Chemical Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
- Department of Chemistry, University of Basel, Basel, Switzerland.
| | - Sebastian Baś
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
- Faculty of Chemistry, Jagiellonian University, Krakow, Poland
| | - Barbara Mikulak-Klucznik
- Allchemy, Highland, IN, USA
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | | | | | - Jacek Mlynarski
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Louis Gadina
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Wiktor Beker
- Allchemy, Highland, IN, USA.
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland.
| | - Martin D Burke
- Roger Adams Laboratory, School of Chemical Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
- Molecule Maker Laboratory Institute, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
- Molecule Maker Laboratory at the Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
| | - Konrad Tiefenbacher
- Department of Chemistry, University of Basel, Basel, Switzerland.
- Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
| | - Bartosz A Grzybowski
- Allchemy, Highland, IN, USA.
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland.
- IBS Center for Algorithmic and Robotized Synthesis, CARS, Eonyang-eup, Ulju-gun, Ulsan, South Korea.
- Department of Chemistry, UNIST, Eonyang-eup, Ulju-gun, Ulsan, South Korea.
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10
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Tsuchiya N, Nojiri T, Nishikata T. Oxazaborolidinones: Steric Coverage Effect of Lewis Acidic Boron Center in Suzuki-Miyaura Coupling Reactions. Chemistry 2023:e202303271. [PMID: 38149455 DOI: 10.1002/chem.202303271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Indexed: 12/28/2023]
Abstract
It was demonstrated that α-hydroxycarboxamide is an excellent boron-protecting group. The reaction between α-hydroxycarboxamide and organoboronic acids produced stable oxazaborolidinones (OxBs), in which thesp 2 ${{_{{\rm sp}{^{2}}}}}$ -hybridized boron atom was sterically protected by α-hydroxycarboxamide. The alkyl groups of the α-hydroxycarboxamide moiety can dynamically cover the p-orbital of thesp 2 ${{_{{\rm sp}{^{2}}}}}$ -hybridized boron center, creating a small space around the boron atom, allowing for smooth transmetalation by a Pd catalyst and easy deprotection by water. This protecting phenomenon is effective for readily purification, Suzuki-Miyaura coupling reactions with unstable boronic acids and iterative cross-couplings.
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Affiliation(s)
- Naoki Tsuchiya
- Graduate School of Science and Engineering, Yamaguchi University, 2-16-1 Tokiwadai, Ube, Yamaguchi, 755-8611, Japan
| | - Takaki Nojiri
- Graduate School of Science and Engineering, Yamaguchi University, 2-16-1 Tokiwadai, Ube, Yamaguchi, 755-8611, Japan
| | - Takashi Nishikata
- Graduate School of Science and Engineering, Yamaguchi University, 2-16-1 Tokiwadai, Ube, Yamaguchi, 755-8611, Japan
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11
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Synthetic drug kills fungi but spares kidney cells. Nature 2023:10.1038/d41586-023-03358-y. [PMID: 37938331 DOI: 10.1038/d41586-023-03358-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2023]
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12
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LaPorte AJ, Feldner JE, Spies JC, Maher TJ, Burke MD. MIDA- and TIDA-Boronates Stabilize α-Radicals Through B-N Hyperconjugation. Angew Chem Int Ed Engl 2023; 62:e202309566. [PMID: 37540542 DOI: 10.1002/anie.202309566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2023] [Revised: 08/03/2023] [Accepted: 08/04/2023] [Indexed: 08/05/2023]
Abstract
Multifunctional organoboron compounds increasingly enable the simple generation of complex, Csp3 -rich small molecules. The ability of boron-containing functional groups to modify the reactivity of α-radicals has also enabled a myriad of chemical reactions. Boronic esters with vacant p-orbitals have a significant stabilizing effect on α-radicals due to delocalization of spin density into the empty orbital. The effect of coordinatively saturated derivatives, such as N-methyliminodiacetic acid (MIDA) boronates and counterparts, remains less clear. Herein, we demonstrate that coordinatively saturated MIDA and TIDA boronates stabilize secondary alkyl α-radicals via σB-N hyperconjugation in a manner that allows site-selective C-H bromination. DFT calculated radical stabilization energies and spin density maps as well as LED NMR kinetic analysis of photochemical bromination rates of different boronic esters further these findings. This work clarifies that the α-radical stabilizing effect of boronic esters does not only proceed via delocalization of radical character into vacant boron p-orbitals, but that hyperconjugation of tetrahedral boron-containing functional groups and their ligand electron delocalizing ability also play a critical role. These findings establish boron ligands as a useful dial for tuning reactivity at the α-carbon.
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Affiliation(s)
- Antonio J LaPorte
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
| | - Jack E Feldner
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
| | - Jan C Spies
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
| | - Tom J Maher
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
| | - Martin D Burke
- Department of Chemistry, University of Illinois, Urbana, IL, 61820, USA
- Carle Illinois College of Medicine, University of Illinois, Urbana, IL, 61820, USA
- Department of Biochemistry, University of Illinois, Urbana, IL, 61820, USA
- Arnold and Mable Beckman Institute, University of Illinois, Urbana, IL, 61820, USA
- Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana, IL, 61820, USA
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13
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Li Y, Chen Z, Lin S, Liu Y, Qian J, Li Q, Huang Z, Wang H. Regioselective Electrophilic Addition to Propargylic B(MIDA)s Enabled by β-Boron Effect. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2023; 10:e2304282. [PMID: 37632709 PMCID: PMC10602563 DOI: 10.1002/advs.202304282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Indexed: 08/28/2023]
Abstract
Electrophilic addition reaction to alkynes is of fundamental importance in organic chemistry, yet the regiocontrol when reacting with unsymmetrical 1,2-dialkyl substituted alkynes is often problematic. Herein, it is demonstrated that the rarely recognized β-boron effect can confer a high level of site-selectivity in several alkyne electrophilic addition reactions. A broad range of highly functionalized and complex organoborons are thus formed under simple reaction conditions starting from propargylic MIDA (N-methyliminodiacetic acid) boronates. These products are demonstrated to be valuable building blocks in organic synthesis. In addition to the regiocontrol, this study also observes a drastic rate enhancement upon B(MIDA) substitution. Theoretical calculation reveals that the highest occupied molecular obital (HOMO) energy level of propargylic B(MIDA) is significantly raised by 0.3 eV, and the preferential electrophilic addition to the γ position is due to its higher HOMO orbital coefficient and more negative natural bond orbital (NBO) charge compared to the β position. This study demonstrates the potential of utilizing the β-boron effect in stereoelectronic control of chemical transformations, which can inspire further research in this area.
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Affiliation(s)
- Yin Li
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat‐Sen UniversityGuangzhou510006China
| | - Zhi‐Hao Chen
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat‐Sen UniversityGuangzhou510006China
| | - Shuang Lin
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat‐Sen UniversityGuangzhou510006China
| | - Yuan Liu
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat‐Sen UniversityGuangzhou510006China
| | - Jiasheng Qian
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat‐Sen UniversityGuangzhou510006China
| | - Qingjiang Li
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat‐Sen UniversityGuangzhou510006China
| | - Zhi‐Shu Huang
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat‐Sen UniversityGuangzhou510006China
| | - Honggen Wang
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat‐Sen UniversityGuangzhou510006China
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14
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Xie Q, Zhang R, Dong G. Programmable Amine Synthesis via Iterative Boron Homologation. Angew Chem Int Ed Engl 2023; 62:e202307118. [PMID: 37417916 DOI: 10.1002/anie.202307118] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2023] [Revised: 07/06/2023] [Accepted: 07/07/2023] [Indexed: 07/08/2023]
Abstract
The value of Matteson-type reactions has been increasingly recognized for developing automated organic synthesis. However, the typical Matteson reactions almost exclusively focus on homologation of carbon units. Here, we report the detailed development of sequential insertion of nitrogen and carbon atoms into boronate C-B bonds, which provides a modular and iterative approach to access functionalized tertiary amines. A new class of nitrenoid reagents is uncovered to allow direct formation of aminoboranes from aryl or alkyl boronates via N-insertion. The one-pot N-insertion followed by controlled mono- or double-carbenoid insertion has been realized with widely available aryl boronates. The resulting aminoalkyl boronate products can undergo further homologation and various other transformations. Preliminary success on homologation of N,N-dialkylaminoboranes and sequential N- and C-insertions with alkyl boronates have also been achieved. To broaden the synthetic utility, selective removal of a benzyl or aryl substituent permits access to secondary or primary amine products. The application of this method has been demonstrated in the modular synthesis of bioactive compounds and the programmable construction of diamines and aminoethers. A plausible reaction mechanism, supported by preliminary NMR (nuclear magnetic resonance) and computational studies, is also proposed.
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Affiliation(s)
- Qiqiang Xie
- Department of Chemistry, The University of Chicago, 5735 S Ellis Ave., Chicago, IL, 60637, USA
| | - Rui Zhang
- Department of Chemistry, The University of Chicago, 5735 S Ellis Ave., Chicago, IL, 60637, USA
| | - Guangbin Dong
- Department of Chemistry, The University of Chicago, 5735 S Ellis Ave., Chicago, IL, 60637, USA
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15
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Salley D, Manzano JS, Kitson PJ, Cronin L. Robotic Modules for the Programmable Chemputation of Molecules and Materials. ACS CENTRAL SCIENCE 2023; 9:1525-1537. [PMID: 37637738 PMCID: PMC10450877 DOI: 10.1021/acscentsci.3c00304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/12/2023] [Indexed: 08/29/2023]
Abstract
Before leveraging big data methods like machine learning and artificial intelligence (AI) in chemistry, there is an imperative need for an affordable, universal digitization standard. This mirrors the foundational requisites of the digital revolution, which demanded standard architectures with precise specifications. Recently, we have developed automated platforms tailored for chemical AI-driven exploration, including the synthesis of molecules, materials, nanomaterials, and formulations. Our focus has been on designing and constructing affordable standard hardware and software modules that serve as a blueprint for chemistry digitization across varied fields. Our platforms can be categorized into four types based on their applications: (i) discovery systems for the exploration of chemical space and novel reactivity, (ii) systems for the synthesis and manufacture of fine chemicals, (iii) platforms for formulation discovery and exploration, and (iv) systems for materials discovery and synthesis. We also highlight the convergent evolution of these platforms through shared hardware, firmware, and software alongside the creation of a unique programming language for chemical and material systems. This programming approach is essential for reliable synthesis, designing experiments, discovery, optimization, and establishing new collaboration standards. Furthermore, it is crucial for verifying literature findings, enhancing experimental outcome reliability, and fostering collaboration and sharing of unsuccessful experiments across different research labs.
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Affiliation(s)
- Daniel Salley
- School of Chemistry, University
of Glasgow, University Avenue, Glasgow G12 8QQ, U.K.
| | - J. Sebastián Manzano
- School of Chemistry, University
of Glasgow, University Avenue, Glasgow G12 8QQ, U.K.
| | - Philip J. Kitson
- School of Chemistry, University
of Glasgow, University Avenue, Glasgow G12 8QQ, U.K.
| | - Leroy Cronin
- School of Chemistry, University
of Glasgow, University Avenue, Glasgow G12 8QQ, U.K.
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16
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Wu J, Zhang J, Hu M, Reiser P, Torresi L, Friederich P, Lahn L, Kasian O, Guldi DM, Pérez-Ojeda ME, Barabash A, Rocha-Ortiz JS, Zhao Y, Xie Z, Luo J, Wang Y, Seok SI, Hauch JA, Brabec CJ. Integrated System Built for Small-Molecule Semiconductors via High-Throughput Approaches. J Am Chem Soc 2023. [PMID: 37467341 PMCID: PMC10401720 DOI: 10.1021/jacs.3c03271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/21/2023]
Abstract
High-throughput synthesis of solution-processable structurally variable small-molecule semiconductors is both an opportunity and a challenge. A large number of diverse molecules provide a possibility for quick material discovery and machine learning based on experimental data. However, the diversity of the molecular structure leads to the complexity of molecular properties, such as solubility, polarity, and crystallinity, which poses great challenges to solution processing and purification. Here, we first report an integrated system for the high-throughput synthesis, purification, and characterization of molecules with a large variety. Based on the principle "Like dissolves like," we combine theoretical calculations and a robotic platform to accelerate the purification of those molecules. With this platform, a material library containing 125 molecules and their optical-electronic properties was built within a timeframe of weeks. More importantly, the high repeatability of recrystallization we design is a reliable approach to further upgrading and industrial production.
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Affiliation(s)
- Jianchang Wu
- Forschungszentrum Jülich GmbH, Helmholtz-Institute Erlangen-Nürnberg (HI-ERN), Immerwahrstraße 2, 91058 Erlangen, Germany
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
| | - Jiyun Zhang
- Forschungszentrum Jülich GmbH, Helmholtz-Institute Erlangen-Nürnberg (HI-ERN), Immerwahrstraße 2, 91058 Erlangen, Germany
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
| | - Manman Hu
- Department of Energy Engineering, School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan 44919, Korea
| | - Patrick Reiser
- Institute of Nanotechnology, Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Luca Torresi
- Institute of Nanotechnology, Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Pascal Friederich
- Institute of Nanotechnology, Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- Institute of Theoretical Informatics, Karlsruhe Institute of Technology (KIT), Ham Fasanengarten 5, 76131 Karlsruhe, Germany
| | - Leopold Lahn
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
- Helmholtz-Zentrum Berlin GmbH, Helmholtz Institut Erlangen-Nürnberg, Cauerstraße 1, 91058 Erlangen, Germany
| | - Olga Kasian
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
- Helmholtz-Zentrum Berlin GmbH, Helmholtz Institut Erlangen-Nürnberg, Cauerstraße 1, 91058 Erlangen, Germany
| | - Dirk M Guldi
- Department of Chemistry and Pharmacy & Interdisciplinary Center of Molecular Materials (ICMM), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), 91058 Erlangen, Germany
| | - M Eugenia Pérez-Ojeda
- Department of Chemistry and Pharmacy, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Nikolaus-Fiebiger-Straße 10, 91058 Erlangen, Germany
| | - Anastasia Barabash
- Forschungszentrum Jülich GmbH, Helmholtz-Institute Erlangen-Nürnberg (HI-ERN), Immerwahrstraße 2, 91058 Erlangen, Germany
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
| | - Juan S Rocha-Ortiz
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
| | - Yicheng Zhao
- Forschungszentrum Jülich GmbH, Helmholtz-Institute Erlangen-Nürnberg (HI-ERN), Immerwahrstraße 2, 91058 Erlangen, Germany
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
- University of Electronic Science and Technology of China, School of Electronic Science and Engineering, State Key Laboratory of Electronic Thin Films and Integrated Devices, 611731 Chengdu, P. R. China
| | - Zhiqiang Xie
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
| | - Junsheng Luo
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
- University of Electronic Science and Technology of China, School of Electronic Science and Engineering, State Key Laboratory of Electronic Thin Films and Integrated Devices, 611731 Chengdu, P. R. China
| | - Yunuo Wang
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
| | - Sang Il Seok
- Department of Energy Engineering, School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan 44919, Korea
| | - Jens A Hauch
- Forschungszentrum Jülich GmbH, Helmholtz-Institute Erlangen-Nürnberg (HI-ERN), Immerwahrstraße 2, 91058 Erlangen, Germany
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
| | - Christoph J Brabec
- Forschungszentrum Jülich GmbH, Helmholtz-Institute Erlangen-Nürnberg (HI-ERN), Immerwahrstraße 2, 91058 Erlangen, Germany
- Faculty of Engineering, Department of Material Science, Materials for Electronics and Energy Technology (i-MEET), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Martensstrasse 7, 91058 Erlangen, Germany
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17
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Gu G, Xu Z, Wen L, Liang J, Wang C, Wan X, Zhao Y. Chirality Sensing of N-Heterocycles via 19F NMR. JACS AU 2023; 3:1348-1357. [PMID: 37234104 PMCID: PMC10206601 DOI: 10.1021/jacsau.2c00661] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Revised: 02/20/2023] [Accepted: 04/20/2023] [Indexed: 05/27/2023]
Abstract
Methods to rapidly detect and differentiate chiral N-heterocyclic compounds become increasingly important owing to the widespread application of N-heterocycles in drug discovery and materials science. We herein report a 19F NMR-based chemosensing approach for the prompt enantioanalysis of various N-heterocycles, where the dynamic binding between the analytes and a chiral 19F-labeled palladium probe create characteristic 19F NMR signals assignable to each enantiomer. The open binding site of the probe allows the effective recognition of bulky analytes that are otherwise difficult to detect. The chirality center distal to the binding site is found sufficient for the probe to discriminate the stereoconfiguration of the analyte. The utility of the method in the screening of reaction conditions for the asymmetric synthesis of lansoprazole is demonstrated.
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Affiliation(s)
- Guangxing Gu
- Key
Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic
Chemistry, University of Chinese Academy
of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Zhenchuang Xu
- Key
Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic
Chemistry, University of Chinese Academy
of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Lixian Wen
- Key
Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic
Chemistry, University of Chinese Academy
of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Jinhua Liang
- Key
Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic
Chemistry, University of Chinese Academy
of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Chenyang Wang
- Key
Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic
Chemistry, University of Chinese Academy
of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Xiaolong Wan
- Shanghai
Institute of Organic Chemistry, Chinese
Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Yanchuan Zhao
- Key
Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic
Chemistry, University of Chinese Academy
of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
- Key
Laboratory of Energy Regulation Materials, Shanghai Institute of Organic
Chemistry, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
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18
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Capaldo L, Wen Z, Noël T. A field guide to flow chemistry for synthetic organic chemists. Chem Sci 2023; 14:4230-4247. [PMID: 37123197 PMCID: PMC10132167 DOI: 10.1039/d3sc00992k] [Citation(s) in RCA: 32] [Impact Index Per Article: 32.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Accepted: 03/15/2023] [Indexed: 03/17/2023] Open
Abstract
Flow chemistry has unlocked a world of possibilities for the synthetic community, but the idea that it is a mysterious "black box" needs to go. In this review, we show that several of the benefits of microreactor technology can be exploited to push the boundaries in organic synthesis and to unleash unique reactivity and selectivity. By "lifting the veil" on some of the governing principles behind the observed trends, we hope that this review will serve as a useful field guide for those interested in diving into flow chemistry.
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Affiliation(s)
- Luca Capaldo
- Flow Chemistry Group, Van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam 1098 XH Amsterdam The Netherlands
| | - Zhenghui Wen
- Flow Chemistry Group, Van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam 1098 XH Amsterdam The Netherlands
| | - Timothy Noël
- Flow Chemistry Group, Van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam 1098 XH Amsterdam The Netherlands
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19
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Sadybekov AV, Katritch V. Computational approaches streamlining drug discovery. Nature 2023; 616:673-685. [PMID: 37100941 DOI: 10.1038/s41586-023-05905-z] [Citation(s) in RCA: 125] [Impact Index Per Article: 125.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2022] [Accepted: 03/01/2023] [Indexed: 04/28/2023]
Abstract
Computer-aided drug discovery has been around for decades, although the past few years have seen a tectonic shift towards embracing computational technologies in both academia and pharma. This shift is largely defined by the flood of data on ligand properties and binding to therapeutic targets and their 3D structures, abundant computing capacities and the advent of on-demand virtual libraries of drug-like small molecules in their billions. Taking full advantage of these resources requires fast computational methods for effective ligand screening. This includes structure-based virtual screening of gigascale chemical spaces, further facilitated by fast iterative screening approaches. Highly synergistic are developments in deep learning predictions of ligand properties and target activities in lieu of receptor structure. Here we review recent advances in ligand discovery technologies, their potential for reshaping the whole process of drug discovery and development, as well as the challenges they encounter. We also discuss how the rapid identification of highly diverse, potent, target-selective and drug-like ligands to protein targets can democratize the drug discovery process, presenting new opportunities for the cost-effective development of safer and more effective small-molecule treatments.
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Affiliation(s)
- Anastasiia V Sadybekov
- Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA
- Center for New Technologies in Drug Discovery and Development, Bridge Institute, Michelson Center for Convergent Biosciences, University of Southern California, Los Angeles, CA, USA
| | - Vsevolod Katritch
- Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA.
- Center for New Technologies in Drug Discovery and Development, Bridge Institute, Michelson Center for Convergent Biosciences, University of Southern California, Los Angeles, CA, USA.
- Department of Chemistry, University of Southern California, Los Angeles, CA, USA.
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20
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Lei Z, Ang HT, Wu J. Advanced In-Line Purification Technologies in Multistep Continuous Flow Pharmaceutical Synthesis. Org Process Res Dev 2023. [DOI: 10.1021/acs.oprd.2c00374] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/03/2023]
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21
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Li Y, Fan WX, Luo S, Trofimova A, Liu Y, Xue JH, Yang L, Li Q, Wang H, Yudin AK. β-Boron Effect Enables Regioselective and Stereospecific Electrophilic Addition to Alkenes. J Am Chem Soc 2023; 145:7548-7558. [PMID: 36947220 DOI: 10.1021/jacs.3c00860] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/23/2023]
Abstract
Electrophilic addition to alkenes is a textbook-taught reaction, yet it is not always possible to control the regioselectivity of addition to unsymmetrical 1,2-disubstituted substrates. We report the observation and applications of the β-boron effect that accounts for high regioselectivity in electrophilic addition reactions to allylic MIDA (N-methyliminodiacetic acid) boronates. While the well-established β-silicon effect bears partial resemblance to the observed reactivity, the silyl group is typically lost during functionalization. In contrast, the boryl moiety is retained in the product when B(MIDA) is used as the nucleophilic stabilizer. Mechanistic studies elucidate the origin of this effect and demonstrate how σ(C-B) hyperconjugation helps stabilize the incipient carbocation. This transformation represents a rare example of the stereospecific hydrohalogenation of secondary allyl MIDA-boronates that proceeds in a syn-fashion.
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Affiliation(s)
- Yin Li
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Wen-Xin Fan
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Shuang Luo
- State Key Laboratory of Respiratory Disease, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, 190 Kaiyuan Avenue, Guangzhou 510530, China
| | - Alina Trofimova
- Davenport Research Laboratories, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6 Canada
| | - Yuan Liu
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Jiang-Hao Xue
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Ling Yang
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Qingjiang Li
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Honggen Wang
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Andrei K Yudin
- Davenport Research Laboratories, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6 Canada
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22
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Teresa J, Velado M, Fernández de la Pradilla R, Viso A, Lozano B, Tortosa M. Enantioselective Suzuki cross-coupling of 1,2-diboryl cyclopropanes. Chem Sci 2023; 14:1575-1581. [PMID: 36794195 PMCID: PMC9906671 DOI: 10.1039/d2sc05789a] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Accepted: 01/12/2023] [Indexed: 01/15/2023] Open
Abstract
Herein, we describe the catalytic enantioselective cross-coupling of 1,2-bisboronic esters. Prior work on group specific cross coupling is limited to the use of geminal bis-boronates. This desymmetrization provides a novel approach to prepare enantioenriched cyclopropyl boronates with three contiguous stereocenters, that could be further derivatized through selective functionalization of the carbon-boron bond. Our results suggest that transmetallation, which is the enantiodetermining step, takes place with retention of stereochemistry at carbon.
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Affiliation(s)
- Javier Teresa
- Organic Chemistry Department, Center for Innovation in Advanced Chemistry (ORFEO-CINQA), Universidad Autónoma de Madrid (UAM) 28049 Madrid Spain
| | - Marina Velado
- Instituto de Química Orgánica General (IQOG), CSIC Juan de la Cierva 3 28006 Madrid Spain
| | | | - Alma Viso
- Instituto de Química Orgánica General (IQOG), CSIC Juan de la Cierva 3 28006 Madrid Spain
| | - Blanca Lozano
- Organic Chemistry Department, Center for Innovation in Advanced Chemistry (ORFEO-CINQA), Universidad Autónoma de Madrid (UAM) 28049 Madrid Spain
| | - Mariola Tortosa
- Organic Chemistry Department, Center for Innovation in Advanced Chemistry (ORFEO-CINQA), Universidad Autónoma de Madrid (UAM) 28049 Madrid Spain
- Institute for Advanced Research in Chemical Sciences (IAdChem), Universidad Autónoma de Madrid (UAM) 28049 Madrid Spain
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23
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Simon PM, Castillo JO, Owyong TC, White JM, Saker Neto N, Wong WWH. Protection of Boronic Acids Using a Tridentate Aminophenol ONO Ligand for Selective Suzuki-Miyaura Coupling. J Org Chem 2023; 88:1590-1599. [PMID: 36695169 DOI: 10.1021/acs.joc.2c02651] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Boronic acid protecting group chemistry powerfully enhances the versatility of Suzuki-Miyaura cross-coupling. Prominent examples include trifluoroborate salts, N-methyliminodiacetic acid (MIDA) boronates, and 1,8-diaminonaphthalene boronamides. In this work, we present a bis(2-hydroxybenzyl)methylamine (BOMA) ligand that forms tridentate complexes with boronic acids much like the MIDA ligand but the deprotection is facilitated by organic acids. The BOMA boronates showed considerable stability in both aqueous base and acid, and a variety of chemoselective reactions were performed on these boronates, including selective Suzuki-Miyaura coupling, palladium-catalyzed borylation, ester hydrolysis, alkylation, lithiation-borylation, and oxidative hydroxydeboronation.
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Affiliation(s)
- Paulo Miguel Simon
- ARC Centre of Excellence in Exciton Science, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia.,School of Chemistry, Bio21 Institute, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia
| | - Jonathan O Castillo
- ARC Centre of Excellence in Exciton Science, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia.,School of Chemistry, Bio21 Institute, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia
| | - Tze Cin Owyong
- ARC Centre of Excellence in Exciton Science, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia.,School of Chemistry, Bio21 Institute, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia
| | - Jonathan M White
- School of Chemistry, Bio21 Institute, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia
| | - Nicolau Saker Neto
- ARC Centre of Excellence in Exciton Science, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia.,School of Chemistry, Bio21 Institute, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia
| | - Wallace W H Wong
- ARC Centre of Excellence in Exciton Science, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia.,School of Chemistry, Bio21 Institute, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia
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24
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Fertig R, Leowsky-Künstler F, Irrgang T, Kempe R. Rational design of N-heterocyclic compound classes via regenerative cyclization of diamines. Nat Commun 2023; 14:595. [PMID: 36737444 PMCID: PMC9898245 DOI: 10.1038/s41467-023-36220-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Accepted: 01/19/2023] [Indexed: 02/05/2023] Open
Abstract
The discovery of reactions is a central topic in chemistry and especially interesting if access to compound classes, which have not yet been synthesized, is permitted. N-Heterocyclic compounds are very important due to their numerous applications in life and material science. We introduce here a consecutive three-component reaction, classes of N-heterocyclic compounds, and the associated synthesis concept (regenerative cyclisation). Our reaction starts with a diamine, which reacts with an amino alcohol via dehydrogenation, condensation, and cyclisation to form a new pair of amines that undergoes ring closure with an aldehyde, carbonyldiimidazole, or a dehydrogenated amino alcohol. Hydrogen is liberated in the first reaction step and the dehydrogenation catalyst used is based on manganese.
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Affiliation(s)
- Robin Fertig
- grid.7384.80000 0004 0467 6972Lehrstuhl Anorganische Chemie II—Katalysatordesign, Sustainable Chemistry Centre, Universität Bayreuth, 95440 Bayreuth, Germany
| | - Felix Leowsky-Künstler
- grid.7384.80000 0004 0467 6972Lehrstuhl Anorganische Chemie II—Katalysatordesign, Sustainable Chemistry Centre, Universität Bayreuth, 95440 Bayreuth, Germany
| | - Torsten Irrgang
- grid.7384.80000 0004 0467 6972Lehrstuhl Anorganische Chemie II—Katalysatordesign, Sustainable Chemistry Centre, Universität Bayreuth, 95440 Bayreuth, Germany
| | - Rhett Kempe
- grid.7384.80000 0004 0467 6972Lehrstuhl Anorganische Chemie II—Katalysatordesign, Sustainable Chemistry Centre, Universität Bayreuth, 95440 Bayreuth, Germany
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25
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Wu TC, Aguilar-Granda A, Hotta K, Yazdani SA, Pollice R, Vestfrid J, Hao H, Lavigne C, Seifrid M, Angello N, Bencheikh F, Hein JE, Burke M, Adachi C, Aspuru-Guzik A. A Materials Acceleration Platform for Organic Laser Discovery. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023; 35:e2207070. [PMID: 36373553 DOI: 10.1002/adma.202207070] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 10/16/2022] [Indexed: 06/16/2023]
Abstract
Conventional materials discovery is a laborious and time-consuming process that can take decades from initial conception of the material to commercialization. Recent developments in materials acceleration platforms promise to accelerate materials discovery using automation of experiments coupled with machine learning. However, most of the automation efforts in chemistry focus on synthesis and compound identification, with integrated target property characterization receiving less attention. In this work, an automated platform is introduced for the discovery of molecules as gain mediums for organic semiconductor lasers, a problem that has been challenging for conventional approaches. This platform encompasses automated lego-like synthesis, product identification, and optical characterization that can be executed in a fully integrated end-to-end fashion. Using this workflow to screen organic laser candidates, discovered eight potential candidates for organic lasers is discovered. The lasing threshold of four molecules in thin-film devices and find two molecules with state-of-the-art performance is tested. These promising results show the potential of automated synthesis and screening for accelerated materials development.
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Affiliation(s)
- Tony C Wu
- Department of Chemistry, University of Toronto, 80 St George St, Toronto, ON, M5S 3H6, Canada
| | - Andrés Aguilar-Granda
- Department of Chemistry, University of Toronto, 80 St George St, Toronto, ON, M5S 3H6, Canada
| | - Kazuhiro Hotta
- Department of Chemistry, University of Toronto, 80 St George St, Toronto, ON, M5S 3H6, Canada
| | - Sahar Alasvand Yazdani
- Center for Organic Photonics and Electronics Research (OPERA), Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, 819-0395, Japan
| | - Robert Pollice
- Department of Chemistry, University of Toronto, 80 St George St, Toronto, ON, M5S 3H6, Canada
| | - Jenya Vestfrid
- Department of Chemistry, University of Toronto, 80 St George St, Toronto, ON, M5S 3H6, Canada
| | - Han Hao
- Department of Chemistry, University of Toronto, 80 St George St, Toronto, ON, M5S 3H6, Canada
| | - Cyrille Lavigne
- Department of Chemistry, University of Toronto, 80 St George St, Toronto, ON, M5S 3H6, Canada
| | - Martin Seifrid
- Department of Chemistry, University of Toronto, 80 St George St, Toronto, ON, M5S 3H6, Canada
| | - Nicholas Angello
- Department of Chemistry, University of Illinois at Urbana-Champaign, 505 S Mathews Ave, Urbana, IL, 61801, USA
| | - Fatima Bencheikh
- Center for Organic Photonics and Electronics Research (OPERA), Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, 819-0395, Japan
| | - Jason E Hein
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC, V6T 1Z1, Canada
| | - Martin Burke
- Department of Chemistry, University of Illinois at Urbana-Champaign, 505 S Mathews Ave, Urbana, IL, 61801, USA
| | - Chihaya Adachi
- Center for Organic Photonics and Electronics Research (OPERA), Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, 819-0395, Japan
| | - Alán Aspuru-Guzik
- Department of Chemistry, University of Toronto, 80 St George St, Toronto, ON, M5S 3H6, Canada
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26
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He C, Dong J, Xu C, Pan X. N-Coordinated Organoboron in Polymer Synthesis and Material Science. ACS POLYMERS AU 2022. [DOI: 10.1021/acspolymersau.2c00046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Congze He
- State Key Laboratory of Molecular Engineering of Polymers, Department of Macromolecular Science, Fudan University, Shanghai 200438, China
| | - Jin Dong
- State Key Laboratory of Molecular Engineering of Polymers, Department of Macromolecular Science, Fudan University, Shanghai 200438, China
| | - Chaoran Xu
- State Key Laboratory of Molecular Engineering of Polymers, Department of Macromolecular Science, Fudan University, Shanghai 200438, China
| | - Xiangcheng Pan
- State Key Laboratory of Molecular Engineering of Polymers, Department of Macromolecular Science, Fudan University, Shanghai 200438, China
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27
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Angello NH, Rathore V, Beker W, Wołos A, Jira ER, Roszak R, Wu TC, Schroeder CM, Aspuru-Guzik A, Grzybowski BA, Burke MD. Closed-loop optimization of general reaction conditions for heteroaryl Suzuki-Miyaura coupling. Science 2022; 378:399-405. [DOI: 10.1126/science.adc8743] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
General conditions for organic reactions are important but rare, and efforts to identify them usually consider only narrow regions of chemical space. Discovering more general reaction conditions requires considering vast regions of chemical space derived from a large matrix of substrates crossed with a high-dimensional matrix of reaction conditions, rendering exhaustive experimentation impractical. Here, we report a simple closed-loop workflow that leverages data-guided matrix down-selection, uncertainty-minimizing machine learning, and robotic experimentation to discover general reaction conditions. Application to the challenging and consequential problem of heteroaryl Suzuki-Miyaura cross-coupling identified conditions that double the average yield relative to a widely used benchmark that was previously developed using traditional approaches. This study provides a practical road map for solving multidimensional chemical optimization problems with large search spaces.
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Affiliation(s)
- Nicholas H. Angello
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Vandana Rathore
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | | | - Agnieszka Wołos
- Allchemy, Inc., Highland, IN, USA
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Edward R. Jira
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Rafał Roszak
- Allchemy, Inc., Highland, IN, USA
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Tony C. Wu
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
| | - Charles M. Schroeder
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Department of Materials Science and Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Alán Aspuru-Guzik
- Department of Chemistry, University of Toronto, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
- Vector Institute for Artificial Intelligence, Toronto, ON, Canada
- Canadian Institute for Advanced Research, Toronto, ON, Canada
- Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada
| | - Bartosz A. Grzybowski
- Allchemy, Inc., Highland, IN, USA
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
- Center for Soft and Living Matter, Institute for Basic Science, Ulsan, Republic of Korea
- Department of Chemistry, Ulsan Institute of Science and Technology, Ulsan, Republic of Korea
| | - Martin D. Burke
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Cancer Center at Illinois, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
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28
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Tran GN, Bouley BS, Mirica LM. Isolation and Characterization of Heteroleptic Mononuclear Palladium(I) Complexes. J Am Chem Soc 2022; 144:20008-20015. [PMID: 36257056 DOI: 10.1021/jacs.2c08765] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Catalytic transformations involving Pd(0)/Pd(II) catalytic cycles are very well known, and processes involving high-valent Pd(III) and Pd(IV) and low-valent Pd(I) intermediates have also gained interest in recent years. Although low-valent Pd(I) intermediates are proposed in these catalytic cycles, isolated and characterized mononuclear Pd(I) species are very rare. Herein, we report the isolation of two heteroleptic mononuclear Pd(I) complexes stabilized by dithiapyridinophane ligands that were fully characterized by single-crystal X-ray diffraction; EPR, IR, UV-vis spectroscopies; and computational studies. Excitingly, one of these Pd(I) complexes shows Kumada Csp3-Csp2 cross-coupling competency, and initial studies of the other shows direct evidence for Csp3-H bond activation proposed to occur at the Pd(I) center.
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Affiliation(s)
- Giang N Tran
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Bailey S Bouley
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Liviu M Mirica
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
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29
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Zhu Q, Zhang F, Huang Y, Xiao H, Zhao L, Zhang X, Song T, Tang X, Li X, He G, Chong B, Zhou J, Zhang Y, Zhang B, Cao J, Luo M, Wang S, Ye G, Zhang W, Chen X, Cong S, Zhou D, Li H, Li J, Zou G, Shang W, Jiang J, Luo Y. An all-round AI-Chemist with a scientific mind. Natl Sci Rev 2022; 9:nwac190. [PMID: 36415316 PMCID: PMC9674120 DOI: 10.1093/nsr/nwac190] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2022] [Revised: 08/25/2022] [Accepted: 08/29/2022] [Indexed: 12/03/2022] Open
Abstract
The realization of automated chemical experiments by robots unveiled the prelude to an artificial intelligence (AI) laboratory. Several AI-based systems or robots with specific chemical skills have been demonstrated, but conducting all-round scientific research remains challenging. Here, we present an all-round AI-Chemist equipped with scientific data intelligence that is capable of performing basic tasks generally required in chemical research. Based on a service platform, the AI-Chemist is able to automatically read the literatures from a cloud database and propose experimental plans accordingly. It can control a mobile robot in-house or online to automatically execute the complete experimental process on 14 workstations, including synthesis, characterization and performance tests. The experimental data can be simultaneously analysed by the computational brain of the AI-Chemist through machine learning and Bayesian optimization, allowing a new hypothesis for the next iteration to be proposed. The competence of the AI-Chemist has been scrutinized by three different chemical tasks. In the future, the more advanced all-round AI-Chemists equipped with scientific data intelligence may cause changes to the landscape of the chemical laboratory.
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Affiliation(s)
- Qing Zhu
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - Fei Zhang
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - Yan Huang
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - Hengyu Xiao
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - LuYuan Zhao
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - XuChun Zhang
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - Tao Song
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - XinSheng Tang
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - Xiang Li
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - Guo He
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - BaoChen Chong
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - JunYi Zhou
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - YiHan Zhang
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - Baicheng Zhang
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - JiaQi Cao
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - Man Luo
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - Song Wang
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - GuiLin Ye
- Hefei JiShu Quantum Technology Co. Ltd, Hefei 230026, China
| | - WanJun Zhang
- Hefei JiShu Quantum Technology Co. Ltd, Hefei 230026, China
| | - Xin Chen
- Hefei JiShu Quantum Technology Co. Ltd, Hefei 230026, China
| | - Shuang Cong
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - Donglai Zhou
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - Huirong Li
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - Jialei Li
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - Gang Zou
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
| | - WeiWei Shang
- School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China
| | - Jun Jiang
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
- Hefei National Laboratory, University of Science and Technology of China, Hefei 230088, China
| | - Yi Luo
- Hefei National Research Center for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026, China
- Hefei National Laboratory, University of Science and Technology of China, Hefei 230088, China
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30
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Liashuk OS, Ryzhov IA, Hryshchuk OV, Vashchenko BV, Melnychuk PV, Volovenko YM, Grygorenko OO. Synthesis of 3‐Borylated Pyrrolidines by 1,3‐Dipolar Cycloaddition of Alkenyl Boronates and Azomethine Ylide. Chemistry 2022; 28:e202202117. [DOI: 10.1002/chem.202202117] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Indexed: 12/13/2022]
Affiliation(s)
- Oleksandr S. Liashuk
- Enamine Ltd. Chervonotkatska Street 78 Kyiv 02094 Ukraine
- Taras Shevchenko National University of Kyiv Volodymyrska Street 60 Kyiv 01601 Ukraine
| | - Ihor A. Ryzhov
- Enamine Ltd. Chervonotkatska Street 78 Kyiv 02094 Ukraine
- Taras Shevchenko National University of Kyiv Volodymyrska Street 60 Kyiv 01601 Ukraine
| | - Oleksandr V. Hryshchuk
- Enamine Ltd. Chervonotkatska Street 78 Kyiv 02094 Ukraine
- Taras Shevchenko National University of Kyiv Volodymyrska Street 60 Kyiv 01601 Ukraine
| | - Bohdan V. Vashchenko
- Enamine Ltd. Chervonotkatska Street 78 Kyiv 02094 Ukraine
- Taras Shevchenko National University of Kyiv Volodymyrska Street 60 Kyiv 01601 Ukraine
| | | | - Yulian M. Volovenko
- Taras Shevchenko National University of Kyiv Volodymyrska Street 60 Kyiv 01601 Ukraine
| | - Oleksandr O. Grygorenko
- Enamine Ltd. Chervonotkatska Street 78 Kyiv 02094 Ukraine
- Taras Shevchenko National University of Kyiv Volodymyrska Street 60 Kyiv 01601 Ukraine
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31
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Marotta A, Adams CE, Molloy JJ. The Impact of Boron Hybridisation on Photocatalytic Processes. Angew Chem Int Ed Engl 2022; 61:e202207067. [PMID: 35748797 PMCID: PMC9544826 DOI: 10.1002/anie.202207067] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Indexed: 12/16/2022]
Abstract
Recently the fruitful merger of organoboron chemistry and photocatalysis has come to the forefront of organic synthesis, resulting in the development of new technologies to access complex (non)borylated frameworks. Central to the success of this combination is control of boron hybridisation. Contingent on the photoactivation mode, boron as its neutral planar form or tetrahedral boronate can be used to regulate reactivity. This Minireview highlights the current state of the art in photocatalytic processes utilising organoboron compounds, paying particular attention to the role of boron hybridisation for the target transformation.
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Affiliation(s)
- Alessandro Marotta
- Department of Biomolecular SystemsMax-Planck-Institute of Colloids and InterfacesAm Mühlenberg 114476PotsdamGermany
| | - Callum E. Adams
- Department of Biomolecular SystemsMax-Planck-Institute of Colloids and InterfacesAm Mühlenberg 114476PotsdamGermany
| | - John J. Molloy
- Department of Biomolecular SystemsMax-Planck-Institute of Colloids and InterfacesAm Mühlenberg 114476PotsdamGermany
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32
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Ghosh S, Chakrabortty R, Kumar S, Das A, Ganesh V. Copper-Catalyzed Protoboration of 1,3-Diynes as a Platform for Iterative Functionalization. ACS Catal 2022. [DOI: 10.1021/acscatal.2c03861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Suman Ghosh
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302, India
| | - Rajesh Chakrabortty
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302, India
| | - Shailendra Kumar
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302, India
| | - Aniruddha Das
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302, India
| | - Venkataraman Ganesh
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302, India
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33
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LaPorte AJ, Shi Y, Hein JE, Burke MD. Stereospecific Csp 3 Suzuki–Miyaura Cross-Coupling That Evades β-Oxygen Elimination. ACS Catal 2022. [DOI: 10.1021/acscatal.2c03245] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Antonio J. LaPorte
- Department of Chemistry, University of Illinois, Urbana, Illinois 61801, United States
| | - Yao Shi
- Department of Chemistry, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada
| | - Jason E. Hein
- Department of Chemistry, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada
| | - Martin D. Burke
- Department of Chemistry, University of Illinois, Urbana, Illinois 61801, United States
- Carle Illinois College of Medicine, University of Illinois, Urbana, Illinois 61801, United States
- Department of Biochemistry, University of Illinois, Urbana, Illinois 61801, United States
- Arnold and Mabel Beckman Institute, University of Illinois, Urbana, Illinois 61801, United States
- Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801, United States
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34
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A Convenient, Rapid, Conventional Heating Route to MIDA Boronates. Molecules 2022; 27:molecules27165052. [PMID: 36014293 PMCID: PMC9414357 DOI: 10.3390/molecules27165052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2022] [Revised: 07/11/2022] [Accepted: 08/04/2022] [Indexed: 12/02/2022] Open
Abstract
A cheap, conventional, sealed heating reactor proved to be a useful alternative to a microwave reactor in the synthesis of a >20-member MIDA boronate library (MIDA = N-methyliminodiacetic acid). Reaction times were 10 min and work-ups were minimal, saving on energy and solvent usage.
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35
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Liu Y, Chen ZH, Li Y, Qian J, Li Q, Wang H. Boryl-Dictated Site-Selective Intermolecular Allylic and Propargylic C-H Amination. J Am Chem Soc 2022; 144:14380-14387. [PMID: 35895901 DOI: 10.1021/jacs.2c06117] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
For internal alkenes possessing two or more sets of electronically and sterically similar allylic protons, the site-selectivity for allylic C-H functionalization is fundamentally challenging. Previously, the negative inductive effect from an electronegative atom has been demonstrated to be effective for several inspiring regioselective C-H functionalization reactions. Yet, the use of an electropositive atom for a similar purpose remains to be developed. α-Aminoboronic acids and their derivatives have found widespread applications. Their current syntheses rely heavily on functional group manipulations. Herein we report a boryl-directed intermolecular C-H amination of allyl N-methyliminodiacetyl boronates (B(MIDA)s) and propargylic B(MIDA)s to give α-amino boronates with an exceptionally high level of site-selectivities (up to 300:1). A wide variety of highly functionalized secondary and tertiary α-amino boronates are formed in generally good to excellent yields, thanks to the mildness of the reaction conditions. The unsaturated double and triple bonds within the product leave room for further decorations. Mechanistic studies reveal that the key stabilization effect of the B(MIDA) moiety on its adjacent developing positive charge is responsible for the high site-selectivity and that a closed transition state might be involved, as the reaction is fully stereoretentive. An activation effect of B(MIDA) is also found.
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Affiliation(s)
- Yuan Liu
- School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Zhi-Hao Chen
- School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Yin Li
- School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Jiasheng Qian
- School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Qingjiang Li
- School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
| | - Honggen Wang
- School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou 510006, China
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36
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Jin Z, Cheng Q, Bao ST, Zhang R, Evans AM, Ng F, Xu Y, Steigerwald ML, McDermott AE, Yang Y, Nuckolls C. Iterative Synthesis of Contorted Macromolecular Ladders for Fast-Charging and Long-Life Lithium Batteries. J Am Chem Soc 2022; 144:13973-13980. [PMID: 35878396 DOI: 10.1021/jacs.2c06527] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We report here an iterative synthesis of long helical perylene diimide (hPDI[n]) nanoribbons with a length up to 16 fused benzene rings. These contorted, ladder-type conjugated, and atomically precise nanoribbons show great potential as organic fast-charging and long-lifetime battery cathodes. By tuning the length of the hPDI[n] oligomers, we can simultaneously modulate the electrical conductivity and ionic diffusivity of the material. The length of the ladders adjusts both the conjugation for electron transport and the contortion for lithium-ion transport. The longest oligomer, hPDI[6], when fabricated as the cathode in lithium batteries, features both high electrical conductivity and high ionic diffusivity. This electrode material exhibits a high power density and can be charged in less than 1 min to 66% of its maximum capacity. Remarkably, this material also has exceptional cycling stability and can operate for up to 10,000 charging-discharging cycles without any appreciable capacity decay. The design principles described here chart a clear path for organic battery electrodes that are sustainable, fast-charging, and long lasting.
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Affiliation(s)
- Zexin Jin
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Qian Cheng
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Si Tong Bao
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Ruiwen Zhang
- Department of Applied Physics and Applied Mathematics, Columbia University, New York, New York 10027, United States
| | - Austin M Evans
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Fay Ng
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Yunyao Xu
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Michael L Steigerwald
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Ann E McDermott
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Yuan Yang
- Department of Applied Physics and Applied Mathematics, Columbia University, New York, New York 10027, United States
| | - Colin Nuckolls
- Department of Chemistry, Columbia University, New York, New York 10027, United States
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37
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Marotta A, Adams CE, Molloy J. The Impact of Boron Hybridisation on Photocatalytic Processes. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202207067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Alessandro Marotta
- Max Planck Institute of Colloids and Interfaces: Max-Planck-Institut fur Kolloid und Grenzflachenforschung biomolecular systems GERMANY
| | - Callum E. Adams
- Max Planck Institute of Colloids and Interfaces: Max-Planck-Institut fur Kolloid und Grenzflachenforschung biomolecular systems department GERMANY
| | - John Molloy
- Max Planck Institute of Colloids and Interfaces: Max-Planck-Institut fur Kolloid und Grenzflachenforschung Biomolecular Sytems Am Mühlenberg 1 14476 Potsdam GERMANY
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38
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Bubliauskas A, Blair DJ, Powell‐Davies H, Kitson PJ, Burke MD, Cronin L. Digitizing Chemical Synthesis in 3D Printed Reactionware. Angew Chem Int Ed Engl 2022; 61:e202116108. [PMID: 35257447 PMCID: PMC9186708 DOI: 10.1002/anie.202116108] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2021] [Indexed: 12/12/2022]
Abstract
Chemistry digitization requires an unambiguous link between experiments and the code used to generate the experimental conditions and outcomes, yet this process is not standardized, limiting the portability of any chemical code. What is needed is a universal approach to aid this process using a well-defined standard that is composed of syntheses that are employed in modular hardware. Herein we present a new approach to the digitization of organic synthesis that combines process chemistry principles with 3D printed reactionware. This approach outlines the process for transforming unit operations into digitized hardware and well-defined instructions that ensure effective synthesis. To demonstrate this, we outline the process for digitizing 3 MIDA boronate building blocks, an ester hydrolysis, a Wittig olefination, a Suzuki-Miyaura coupling reaction, and synthesis of the drug sulfanilamide.
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Affiliation(s)
| | - Daniel J. Blair
- Roger Adams Laboratory, School of Chemical SciencesUniversity of IllinoisUrbana-ChampaignIL 61801USA
| | | | | | - Martin D. Burke
- Roger Adams Laboratory, School of Chemical SciencesUniversity of IllinoisUrbana-ChampaignIL 61801USA
| | - Leroy Cronin
- School of ChemistryThe University of GlasgowGlasgowG12 8QQUK
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39
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García-Domínguez A, Leach AG, Lloyd-Jones GC. In Situ Studies of Arylboronic Acids/Esters and R 3SiCF 3 Reagents: Kinetics, Speciation, and Dysfunction at the Carbanion-Ate Interface. Acc Chem Res 2022; 55:1324-1336. [PMID: 35435655 PMCID: PMC9069690 DOI: 10.1021/acs.accounts.2c00113] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Reagent instability reduces the efficiency of chemical processes, and while much effort is devoted to reaction optimization, less attention is paid to the mechanistic causes of reagent decomposition. Indeed, the response is often to simply use an excess of the reagent. Two reaction classes with ubiquitous examples of this are the Suzuki-Miyaura cross-coupling of boronic acids/esters and the transfer of CF3 or CF2 from the Ruppert-Prakash reagent, TMSCF3. This Account describes some of the overarching features of our mechanistic investigations into their decomposition. In the first section we summarize how specific examples of (hetero)arylboronic acids can decompose via aqueous protodeboronation processes: Ar-B(OH)2 + H2O → ArH + B(OH)3. Key to the analysis was the development of a kinetic model in which pH controls boron speciation and heterocycle protonation states. This method revealed six different protodeboronation pathways, including self-catalysis when the pH is close to the pKa of the boronic acid, and protodeboronation via a transient aryl anionoid pathway for highly electron-deficient arenes. The degree of "protection" of boronic acids by diol-esterification is shown to be very dependent on the diol identity, with six-membered ring esters resulting in faster protodeboronation than the parent boronic acid. In the second section of the Account we describe 19F NMR spectroscopic analysis of the kinetics of the reaction of TMSCF3 with ketones, fluoroarenes, and alkenes. Processes initiated by substoichiometric "TBAT" ([Ph3SiF2][Bu4N]) involve anionic chain reactions in which low concentrations of [CF3]- are rapidly and reversibly liberated from a siliconate reservoir, [TMS(CF3)2][Bu4N]. Increased TMSCF3 concentrations reduce the [CF3]- concentration and thus inhibit the rates of CF3 transfer. Computation and kinetics reveal that the TMSCF3 intermolecularly abstracts fluoride from [CF3]- to generate the CF2, in what would otherwise be an endergonic α-fluoride elimination. Starting from [CF3]- and CF2, a cascade involving perfluoroalkene homologation results in the generation of a hindered perfluorocarbanion, [C11F23]-, and inhibition. The generation of CF2 from TMSCF3 is much more efficiently mediated by NaI, and in contrast to TBAT, the process undergoes autoacceleration. The process involves NaI-mediated α-fluoride elimination from [CF3][Na] to generate CF2 and a [NaI·NaF] chain carrier. Chain-branching, by [(CF2)3I][Na] generated in situ (CF2 + TFE + NaI), causes autoacceleration. Alkenes that efficiently capture CF2 attenuate the chain-branching, suppress autoacceleration, and lead to less rapid difluorocyclopropanation. The Account also highlights how a collaborative approach to experiment and computation enables mechanistic insight for control of processes.
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Affiliation(s)
- Andrés García-Domínguez
- EaStChem, University of Edinburgh, Joseph Black Building, David Brewster Road, Edinburgh EH9 3FJ, U.K
| | - Andrew G. Leach
- School of Health Sciences, Stopford Building, The University of Manchester, Oxford Road, Manchester M13 9PT, U.K
| | - Guy C. Lloyd-Jones
- EaStChem, University of Edinburgh, Joseph Black Building, David Brewster Road, Edinburgh EH9 3FJ, U.K
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40
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Fiorito D, Keskin S, Bateman JM, George M, Noble A, Aggarwal VK. Stereocontrolled Total Synthesis of Bastimolide B Using Iterative Homologation of Boronic Esters. J Am Chem Soc 2022; 144:7995-8001. [PMID: 35499478 PMCID: PMC9100475 DOI: 10.1021/jacs.2c03192] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
Bastimolide B is
a polyhydroxy macrolide isolated from marine cyanobacteria
displaying antimalarial activity. It features a dense array of hydroxylated
stereogenic centers with 1,5-relationships along a hydrocarbon chain.
These 1,5-polyols represent a particularly challenging motif for synthesis,
as the remote position of the stereocenters hampers stereocontrol.
Herein, we present a strategy for 1,5-polyol stereocontrolled synthesis
based on iterative boronic ester homologation with enantiopure magnesium
carbenoids. By merging boronic ester homologation and transition-metal-catalyzed
alkene hydroboration and diboration, the acyclic backbone of bastimolide
B was rapidly assembled from readily available building blocks with
full control over the remote stereocenters, enabling the total synthesis
to be completed in 16 steps (LLS).
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Affiliation(s)
- Daniele Fiorito
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, U.K
| | - Selbi Keskin
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, U.K
| | - Joseph M Bateman
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, U.K
| | - Malcolm George
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, U.K
| | - Adam Noble
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, U.K
| | - Varinder K Aggarwal
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, U.K
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41
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Bubliauskas A, Blair DJ, Powell‐Davies H, Kitson PJ, Burke MD, Cronin L, Acknow. Digitizing Chemical Synthesis in 3D Printed Reactionware. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202116108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
| | - Daniel J. Blair
- Roger Adams Laboratory, School of Chemical Sciences University of Illinois Urbana-Champaign IL 61801 USA
| | | | - Philip J. Kitson
- School of Chemistry The University of Glasgow Glasgow G12 8QQ UK
| | - Martin D. Burke
- Roger Adams Laboratory, School of Chemical Sciences University of Illinois Urbana-Champaign IL 61801 USA
| | - Leroy Cronin
- School of Chemistry The University of Glasgow Glasgow G12 8QQ UK
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