Wheldone Revisited: Structure Revision Via DFT-GIAO Chemical Shift Calculations, 1,1-HD-ADEQUATE NMR Spectroscopy, and X-ray Crystallography Studies

Wheldone is a fungal metabolite isolated from the coculture of Aspergillus fischeri and Xylaria flabelliformis, displaying cytotoxic activity against breast, melanoma, and ovarian cancer cell lines. Initially, its structure was characterized as an unusual 5-methyl-bicyclo[5.4.0]undeca-3,5-diene scaffold with a 2-hydroxy-1-propanone side chain and a 3-(2-(1-hydroxyethyl)-2-methyl-2,5-dihydrofuran-3-yl)acrylic acid moiety. Upon further examination, minor inconsistencies in the data suggested the need for the structure to be revisited. Thus, the structure of wheldone has been revised using an orthogonal experimental-computational approach, which combines 1,1-HD-ADEQUATE NMR experiments, DFT-GIAO chemical shift calculations, and single-crystal X-ray diffraction (SCXRD) analysis of a semisynthetic p-bromobenzylamide derivative, formed via a Steglich-type reaction. The summation of these data now permits the unequivocal assignment of both the structure and absolute configuration of the natural product.

How to grow crystals for X-ray crystallography

Growing high-quality crystals remains a necessary part of crystallography and many other techniques. This article tabulates and describes several techniques and variations that will help individuals grow high-quality crystals in preparation for crystallographic techniques and other endeavors, such as form screening. The discussion is organized to focus on low-tech approaches available in any laboratory.

Stereoselective synthesis of different cyclic tetrasiloxane isomers depending on the superacid catalyst employed

In this study, we investigated the hydrolytic condensation of 3-aminopropyldiethoxymethylsilane over different superacid catalysts. We found that cyclic tetrasiloxanes with different stereostructures (Am-CyTS-NNf2 and Am-CyTS-NHf2) could be selectively prepared in high yields (>95%) depending on the superacid catalyst employed (bis(nonafluorobutanesulfonyl)imide or cyclohexafluoropropane-1,3-bis(sulfonyl)imide). The single-crystal X-ray structural analyses of compounds in which amino groups of Am-CyTS-NNf2 and Am-CyTS-NHf2 were protected by the tert-butoxycarbonyl group revealed the formation of all-cis and cis-trans-cis cyclic tetrasiloxanes, respectively.

RNA oligomers at atomic resolution containing 1-methylpseudouridine, an essential building block of mRNA vaccines

All widely used mRNA vaccines against COVID-19 contain in their sequence 1-methylpseudouridine (m1Ψ) instead of uridine. In this publication, we report two high resolution crystal structures (at up to 1.01 and 1.32 Å, respectively) of one such double-stranded 12-mer RNA sequence crystallized in two crystal forms. The structures are compared with similar structures which do not contain this modification. Additionally, the X-ray structure of 1-methyl-pseudouridine itself was determined.

High-throughput nanoscale crystallization of dihydropyridine active pharmaceutical ingredients

Single-crystal X-ray diffraction analysis of small molecule active pharmaceutical ingredients is a key technique in the confirmation of molecular connectivity, including absolute stereochemistry, as well as the solid-state form. However, accessing single crystals suitable for X-ray diffraction analysis of an active pharmaceutical ingredient can be experimentally laborious, especially considering the potential for multiple solid-state forms (solvates, hydrates and polymorphs). In recent years, methods for the exploration of experimental crystallization space of small molecules have undergone a `step-change', resulting in new high-throughput techniques becoming available. Here, the application of high-throughput encapsulated nanodroplet crystallization to a series of six dihydropyridines, calcium channel blockers used in the treatment of hypertension related diseases, is described. This approach allowed 288 individual crystallization experiments to be performed in parallel on each molecule, resulting in rapid access to crystals and subsequent crystal structures for all six dihydropyridines, as well as revealing a new solvate polymorph of nifedipine (1,4-dioxane solvate) and the first known solvate of nimodipine (DMSO solvate). This work further demonstrates the power of modern high-throughput crystallization methods in the exploration of the solid-state landscape of active pharmaceutical ingredients to facilitate crystal form discovery and structural analysis by single-crystal X-ray diffraction.

Carbon Nitrides from Supramolecular Crystals: From Single Atoms to Heterojunctions and Advanced Photoelectrodes

Carbon nitride materials (CN) have become one of the most studied photocatalysts within the last 15 years. While CN absorbs visible light, its low porosity and fast electron-hole recombination hinder its photoelectric performance and have motivated the research in the modification of its physical and chemical properties (such as energy band structure, porosity, or chemical composition) by different means. In this Concept we review the utilization of supramolecular crystals as CN precursors to tailor its properties. We elaborate on the features needed in a supramolecular crystal to serve as CN precursor, we delve on the influence of metal-free crystals in the morphology and porosity of the resulting materials and then discuss the formation of single atoms and heterojunctions when employing a metal-organic crystal. We finally discuss the performance of CN photoanodes derived from crystals and highlight the current standing challenges in the field.

Single crystal formation in core-shell capsules

This work extends the scope of microfluidic-based crystallization methods by introducing solid microcapsules. Hundreds of perfectly similar microcapsules were generated per second, allowing a fast screening of crystallization conditions. XRD analyses were performed directly on encapsulated single crystals demonstrating the potential of this process for the characterization of compounds, including screening polymorphism.

Quantitative three-dimensional local order analysis of nanomaterials through electron diffraction

Structure-property relationships in ordered materials have long been a core principle in materials design. However, the introduction of disorder into materials provides structural flexibility and thus access to material properties that are not attainable in conventional, ordered materials. To understand disorder-property relationships, the disorder - i.e., the local ordering principles - must be quantified. Local order can be probed experimentally by diffuse scattering. The analysis is notoriously difficult, especially if only powder samples are available. Here, we combine the advantages of three-dimensional electron diffraction - a method that allows single crystal diffraction measurements on sub-micron sized crystals - and three-dimensional difference pair distribution function analysis (3D-ΔPDF) to address this problem. In this work, we compare the 3D-ΔPDF from electron diffraction data with those obtained from neutron and x-ray experiments of yttria-stabilized zirconia (Zr0.82Y0.18O1.91) and demonstrate the reliability of the proposed approach.

Solution Spin Crossover Versus Speciation Effects: A Cautionary Tale

Two acyclic tetradentate Schiff base ligands, HL^X-OH (X = H and Br), were synthesised by 2:1 condensation of either 2-pyridinecarboxaldehyde or 5-bromo-2-pyridinecarboxaldehyde and 1,3-diamino-2-propanol and then used to prepare six mononuclear complexes, [Fe^II(HL^X-OH)(NCE)₂], with three different NCE co-ligands (E = BH₃, Se, and S). The apparent solution spin crossover switching temperature, T_1/2, of these 6 complexes, determined by Evans method NMR studies, is tuned by several factors: (a) substituent X present at the 5 position of the pyridine ring of the ligand, (b) E present in the NCE co-ligand, (c) solvent employed (P'), and (d) potentially also by speciation effects. In CD₃CN, for the pair of NCE = NCBH₃ complexes, when X = H, the complex is practically LS (extrapolated T_1/2 ∼624 K), whereas when X = Br, it is far lower (373 K), which implies a higher field strength when X = H than when it is Br. The same trend, X = H results in a higher apparent T_1/2 than X = Br, is seen for the other two pairs of complexes, with E = Se (429 > 351 K, ΔT_1/2 = 78 K) or S (361 > 342 K, ΔT_1/2 = 19 K). For the family of three X = Br complexes, the change of E from BH₃ (373 K) to Se (351 K) to S (342 K) leads to an overall ΔT_1/2(apparent) = 31 K, whereas the decreases are far more pronounced in the X = H family (BH₃ ∼624 > Se 429 > S 361 K). Changing the solvent used from CD₃CN to (CD₃)₂CO and CD₃NO₂, for [Fe^II(HL^Br-OH)(NCE)₂] with either E = BH₃ or S, revealed excellent, and very similar, positive linear correlations (R² = 0.99) of increasing solvent polarity index P' (from 5 to 7) with increasing apparent T_1/2 of the complex (E = BH₃ gave T_1/2 300 < 373 < 451 K , ΔT_1/2 = 151 K; E = S gave T_1/2 288 < 342 < 427 K, ΔT_1/2 = 147 K). Several other solvent parameters were also correlated with the apparent T_1/2 of these complexes (R² = 0.74-0.96). Excellent linear correlations (R² = 0.99) are also obtained with the coordination ability (a^TM) of the three NCE co-ligands with the apparent T_1/2 in both families of compounds, [Fe^II(HL^X-OH)(NCE)₂] where X = H or Br. The ¹⁵N NMR chemical shifts of the nitrogen atom in the three NCE co-ligands (direct measurement) show modest correlations (R² = 0.74 for L^H-OH family and 0.80 for L^Br-OH family) with the apparent T_1/2 values of the corresponding complexes.

An Old Crystallization Technique as a Fast, Facile, and Adaptable Method for Obtaining Single Crystals of Unstable "Li2TCNQF4" and New Compounds of TCNQ or TCNQF4: Syntheses, Crystal Structures, and Magnetic Properties

Detailed structural information is essential for understanding the properties of TCNQ and TCNQF₄ compounds (TCNQ = 7,7,8,8-tetracyanoquinodimethane; TCNQF₄ = 2,3,5,6-tetrafluoro-7,7,8,8-tetracyanoquinodimethane). The ineludible requirement of obtaining crystals of a size and quality sufficient to yield a successful X-ray diffraction analysis has been challenging to satisfy because of the instability of many of these compounds in solution. Crystals of two new complexes of TCNQ, [trans-M(2ampy)₂(TCNQ)₂] [M = Ni (1), Zn (2); 2ampy = 2-aminomethylpyridine], as well as unstable [Li₂(TCNQF₄)(CH₃CN)₄]·CH₃CN (3), can be prepared in minutes by a horizontal diffusion technique and can be harvested easily for X-ray structural studies. Compound 3, previously described as "Li₂TCNQF₄," forms a one-dimensional (1D) ribbon. Compounds 1 and 2 can also be obtained as microcrystalline solids from methanolic solutions of MCl₂/LiTCNQ/2ampy. Their variable-temperature magnetic studies confirmed a contribution of strongly antiferromagnetically coupled pairs of TCNQ^•- anion radicals at higher temperatures with exchange coupling J/k_B = -1206 K and J/k_B = -1369 K for 1 and 2, respectively, estimated using a spin dimer model. The presence of magnetically active anisotropic Ni(II) atoms with S = 1 in 1 was confirmed, and the magnetic behavior of 1, representing an infinite chain of alternating S = 1 sites and S = 1/2 dimers, was described by a spin-ring model suggesting ferromagnetic exchange coupling between Ni(II) sites and anion radicals.

Nickel-Carbon Bond Oxygenation with Green Oxidants via High-Valent Nickel Species

Described herein is the synthesis of the Ni^II complex (^tBuMe₂tacn)Ni^II(cycloneophyl) (^tBuMe₂tacn = 1-tert-butyl-4,7-dimethyl-1,4,7-triazacyclononane, cycloneophyl = -CH₂CMe₂-o-C₆H₄-) and its reactivity with dioxygen and peroxides. The new ^tBuMe₂tacn ligand is designed to enhance the oxidatively induced bond-forming reactivity of high-valent Ni intermediates. Tunable chemoselectivity for Csp²-O vs Csp²-Csp³ bond formation was achieved by selecting the appropriate solvent and reaction conditions. Importantly, the use of cumene hydroperoxide and meta-chloroperbenzoic acid suggests a heterolytic O-O bond cleavage upon reaction with (^tBuMe₂tacn)Ni^II(cycloneophyl). Mechanistic studies using isotopically labeled H₂O₂ support the generation of a high-valent Ni-oxygen species via an inner-sphere mechanism and subsequent reductive elimination to form the Csp²-O bond. Kinetic studies of the exceptionally fast Csp²-O bond-forming reaction reveal a first-order dependence on both (^tBuMe₂tacn)Ni^II(cycloneophyl) and H₂O₂, and thus an overall second-order reaction. Eyring analysis further suggests that the oxidation of the Ni^II complex by H₂O₂ is the rate-determining step, which can be modulated by the presence of coordinating solvents. Moreover, computational studies fully support the conclusions drawn from experimental results. Overall, this study reveals for the first time the ability to control the oxidatively induced C-C vs C-O bond formation reactions at a Ni center. Importantly, the described system merges the known organometallic reactivity of Ni with the biomimetic oxidative transformations resembling oxygenases and peroxidases, and involving high-valent metal-oxygen intermediates, which is a novel approach that should lead to unprecedented oxidative catalytic transformations.

Advanced crystallisation methods for small organic molecules

Molecular materials based on small organic molecules often require advanced structural analysis, beyond the capability of spectroscopic techniques, to fully characterise them. In such cases, diffraction methods such as single crystal X-ray diffraction (SCXRD), are one of the most powerful tools available to researchers, providing molecular and structural elucidation at atomic level resolution, including absolute stereochemistry. However SCXRD, and related diffraction methods, are heavily dependent on the availability of suitable, high-quality crystals, thus crystallisation often becomes the major bottleneck in preparing samples. Following a summary of classical methods for the crystallisation of small organic molecules, this review will focus on a number of recently developed advanced methods for crystalline material sample preparation for SCXRD. This review will cover two main areas of modern small organic molecule crystallisation, namely the inclusion of molecules within host complexes (e.g., "crystalline sponge" and tetraaryladamantane based inclusion chaperones) and the use of high-throughput crystallisation, employing "under-oil" approaches (e.g., microbatch under-oil and ENaCt). Representative examples have been included for each technique, together with a discussion of their relative advantages and limitations to aid the reader in selecting the most appropriate technique to overcome a specific analytical challenge.

Ultrathin metal-organic framework nanosheets as building blocks of lamellar nanofilms for ultrafast molecular sieving

Metal-organic framework (MOF) nanosheets have significant potential applications including separation, catalysis, and sensors. However, the on-demand design with tunable thickness and morphology remains a great challenge, leading to difficulties in modulating their hierarchical assembly for the preparation of macroscopic films. Herein, we report the successful synthesis of smooth and ultrathin MOF (Cu-TCPP (TCPP = 4,4,4,4-(porphine-5,10,15,20-tetrayl)tetrakis(benzoic acid))) nanosheets used in lamellar nanofilms for the rejection of organic molecules from water. Dopamine hydrochloride (DA-HCl) is used as an adjuvant in the synthesis. Facilitated by a HCl acid environment and DA competitive coordination, the normal and lateral growths of Cu-TCPP nanosheets are modulated to achieve the desired thickness and morphology. DA-HCl can be also easily removed from the nanosheets without affecting their physicochemical properties. The as-synthesized nanosheets are utilized as nanofilm building blocks in which they are stacked into ordered bricks. The obtained membrane displays an ultrahigh water permeance of 2540 L m^-2 h^-1 bar^-1, which is two orders of magnitude higher than the currently reported polymer membranes, while it does not sacrifice the solute rejection as completely determined by the intrinsic pore size of the nanosheets (i.e., 98.8% for molecules larger than 1.3 nm). This work provides a novel and facile strategy to tailor the morphology of the MOF nanosheets for maximizing their functionalities and structure superiority in many engineering applications.

Two Novel Dinuclear Cobalt Polypyridyl Complexes in Electro- and Photocatalysis for Hydrogen Production: Cooperativity Increases Performance

Syntheses and mechanisms of two dinuclear Co-polypyridyl catalysts for the H2 evolution reaction (HER) were reported and compared to their mononuclear analogue (R1). In both catalysts, two di-(2,2'-bipyridin-6-yl)-methanone units were linked by either 2,2'-bipyridin-6,6'-yl or pyrazin-2,5-yl. Complexation with CoII gave dinuclear compounds bridged by pyrazine (C2) or bipyridine (C1). Photocatalytic HER gave turnover numbers (TONs) of up to 20000 (C2) and 7000 (C1) in water. Electrochemically, C1 was similar to the R1, whereas C2 showed electronic coupling between the two Co centers. The E(CoII/I ) split by 360 mV into two separate waves. Proton reduction in DMF was investigated for R1 with [HNEt3 ](BF4 ) by simulation, foot of the wave analysis, and linear sweep voltammetry (LSV) with in-line detection of H2 . All methods agreed well with an (E)ECEC mechanism and the first protonation being rate limiting (≈104  m-1  s-1 ). The second reduction was more anodic than the first one. pKa values of around 10 and 7.5 were found for the two protonations. LSV analysis with H2 detection for all catalysts and acids with different pKa values [HBF4 , pKa (DMF)≈3.4], intermediate {[HNEt3 ](BF4 ), pKa (DMF)≈9.2} to weak [AcOH, pKa (DMF)≈13.5] confirmed electrochemical H2 production, distinctly dependent on the pKa values. Only HBF4 protonated CoI intermediates. The two metals in the dualcore C2 cooperated with an increase in rate to a competitive 105  m-1  s-1 with [HNEt3 ](BF4 ). The overpotential decreased compared to R1 by 100 mV. Chronoamperometry established high stabilities for all catalysts with TONlim of 100 for R1 and 320 for C1 and C2.

New Crystalline Salts of Nicotinamide Riboside as Food Additives

NR⁺ is a highly effective vitamin B₃ type supplement due to its unique ability to replenish NAD⁺ levels. While NR⁺ chloride is already on the market as a nutritional supplement, its synthesis is challenging, expensive, and low yielding, making it cumbersome for large-scale industrial production. Here we report the novel crystalline NR⁺ salts, d/l/dl-hydrogen tartrate and d/l/dl-hydrogen malate. Their high-yielding, one-pot manufacture does not require specific equipment and is suitable for multi-ton scale production. These new NR⁺ salts seem ideal for nutritional applications due to their bio-equivalence compared to the approved NR⁺ chloride. In addition, the crystal structures of all stereoisomers of NR⁺ hydrogen tartrate and NR⁺ hydrogen malate and a comparison to the known NR⁺ halogenides are presented.

Influence of crystallisation on the structural and optical properties of lead-free Cs2AgBiBr6 perovskite crystals

We compare the growth of Cs2AgBiBr6 crystals by slow and fast evaporation of organic solvents. Using different growth temperatures and precursors enables bridging the gap between the optical properties and applications of Cs2AgBiBr6 in solar cells.

A temperature-reduced method for the rapid growth of hybrid perovskite single crystals with primary alcohols

In this work, we present the simple and temperature-reduced reactive inverse temperature crystallisation (RITC) method to rapidly grow high-quality organic lead trihalide perovskite single crystals.

Self-assembly of a benzothiazolone conjugate into panchromatic fluorescent fibres and their application in cellular imaging

We report self assembly of a benzothiazolone conjugate (CBT) into fluorescent panchromatic fibres and their application as a panchromatic dye in bioimaging.

Structural, Electrical, and Magnetic Versatility of the Oxalate-Based [CuFe] Compounds Containing 2,2':6',2″-Terpyridine: Anion-Directed Synthesis

The heterodimetallic [CuFe] compounds [Cu^II₄(terpy)₄Cl₅][Fe^III(C₂O₄)₃]·10H₂O (1;terpy = 2,2':6',2''-terpyridine), [Cu^II₂(H₂O)₂(terpy)₂(C₂O₄)][Cu^IIFe^III(CH₃OH)(terpy)(C₂O₄)₃]₂ (2), and {[Cu₂^IIFe^III(H₂O)(terpy)₂(C₂O₄)_7/2]·6H₂O}_n (3) were obtained using building block approach, from reaction of aqueous solution of [Fe(C₂O₄)₃]^3- and a methanol solution containing Cu²⁺ ions and terpy by the layering technique. Interestingly, by changing only the anion of the starting salt of copper(II), Cu(NO₃)₂·3H₂O instead of CuCl₂·2H₂O, an unexpected change in the type of bridge, oxalate (2 and 3) versus chloride (1), was achieved, thus affecting the overall structural architecture. Two polymorphs of 3D coordination polymer [Cu^IIFe^II₂(H₂O)(terpy)(C₂O₄)₃]_n (4), crystallizing in the triclinic (a) and monoclinic (b) space groups, were formed hydrothermally, depending on whether CuCl₂·2H₂O or Cu(NO₃)₂·3H₂O was added to the water, besides K₃[Fe(C₂O₄)₃]·3H₂O and terpy, respectively. Under hydrothermal conditions iron(III) from initial building block is reduced to the divalent state, creating 2D honeycomb [Fe^II₂(C₂O₄)₃]_n^2n- layers, which are bridged by [Cu(H₂O)(terpy)]²⁺ cations. Compounds were investigated by single-crystal X-ray diffraction, IR, and impedance spectroscopies, magnetization measurements, and density functional theory (DFT) calculations. In compounds 1 and 2, 0D magnetism is observed, with 1 having a ground-state spin of 1 due to different interactions through chloride bridges of Cu²⁺ ions in tetramer [Cu^II₄(terpy)₄Cl₅]³⁺ and 2 showing strong antiferromagnetic coupling of Cu²⁺ ions mediated by oxalate ligand in [Cu^II₂(H₂O)₂(terpy)₂(C₂O₄)]²⁺ and weak ones between Cu²⁺ and Fe³⁺ ions through oxalate bridge in [Cu^IIFe^III(CH₃OH)(terpy)(C₂O₄)₃]^-. Polymer 4 exhibits antiferromagnetic phase transition at 25 K: The [Fe^II₂(C₂O₄)₃]_n^2n- layers are antiferromagnetically ordered, and a small amount of interlayer interaction is transferred through [Cu(H₂O)(terpy)]²⁺ cations via O_ox-Cu-O_ox bridges. Additionally, compounds 1 and 2 are electrical insulators, while 4a and 4b show proton conductivity.

Nonclassical Recrystallization

Applications in the fields of materials science and nanotechnology increasingly demand monodisperse nanoparticles in size and shape. Up to now, no general purification procedure exists to thoroughly narrow the size and shape distributions of nanoparticles. Here, we show by analytical ultracentrifugation (AUC) as an absolute and quantitative high‐resolution method that multiple recrystallizations of nanocrystals to mesocrystals is a very efficient tool to generate nanocrystals with an excellent and so‐far unsurpassed size‐distribution (PDI_c=1.0001) and shape. Similar to the crystallization of molecular building blocks, nonclassical recrystallization removes “colloidal” impurities (i.e., nanoparticles, which are different in shape and size from the majority) by assembling them into a mesocrystal. In the case of nanocrystals, this assembly can be size‐ and shape‐selective, since mesocrystals show both long‐range packing ordering and preferable crystallographic orientation of nanocrystals. Besides the generation of highly monodisperse nanoparticles, these findings provide highly relevant insights into the crystallization of mesocrystals.

Magnetic and Electrical Behaviors of the Homo- and Heterometallic 1D and 3D Coordination Polymers Based on the Partial Decomposition of the [Cr(C2O4)3]3- Building Block

One-dimensional (1D) oxalate-bridged homometallic {[Mn(bpy)(C₂O₄)]·1.5H₂O}_n (1) (bpy = 2,2’-bipyridine) and heterodimetallic {[CrCu₃(bpy)₃(CH₃OH)(H₂O)(C₂O₄)₄][Cu(bpy)Cr(C₂O₄)₃]·CH₂Cl₂·CH₃OH·H₂O}_n (2) coordination polymers, as well as the three-dimensional (3D) heterotrimetallic {[CaCr₂Cu₂(phen)₄(C₂O₄)₆]·4CH₃CN·2H₂O}_n (3) (1,10-phenanthroline) network, have been synthesized by a building block approach using a layering technique, and characterized by single-crystal X-ray diffraction, infrared (IR) and impedance spectroscopies and magnetization measurements. During the crystallization process partial decomposition of the tris(oxalato)chromate(III) happened and 1D polymers 1 and 2 were formed. The antiferromagnetic interactions between the manganese(II) ions were mediated by oxalate ligands in the chain [Mn(bpy)(C₂O₄)]_n of 1, with intra-chain super-exchange interaction 𝐽 = (−3.134 ± 0.004) K; magnetic interaction between neighbouring chains is negligible making this system closer than other known Mn-chains to the ideal 1D Heisenberg antiferromagnet. Compound 2 comprises a 1D coordination anion [Cu(bpy)Cr(C₂O₄)₃]_nⁿ⁻ (Cr2–Cu4) with alternating [Cr(C₂O₄)₃]³⁻ and [Cu(bpy)]²⁺ units mutually bridged through the oxalate group. Another chain (Cr1–Cu3) is similar, but involves a homodinuclear unit [Cu(bpy)(H₂O)(µ-C₂O₄)Cu(bpy)(CH₃OH)]²⁺ (Cu1–Cu2) coordinated as a pendant group to a terminal oxalate oxygen. Magnetic measurements showed that the Cu1−Cu2 cationic unit is a strongly coupled antiferromagnetic dimer, independent from the other magnetic ions within ferromagnetic chains Cr1–Cu3 and Cr2–Cu4. A 3D polymer {[CaCr₂Cu₂(phen)₄(C₂O₄)₆]·4CH₃CN·2H₂O}_n (3) comprising three different metal centers (Ca²⁺, Cr³⁺ and Cu²⁺) oxalate-bridged, contains Ca²⁺ atoms as nodes connected with four Cr³⁺ atoms through oxalate ligands. The network thus formed can be reduced to an underlying graph of diamondoid (dia) or (6⁶) topology. Magnetization of 3 shows the ferromagnetic oxalate-bridged dimers [Cu^IICr^III], whose mutual interaction could possibly originate through the spin polarization of Ca²⁺ orbitals. Compounds 1 and 3 exhibit lower electrical conductivity at room temperature (RT) in comparison to compound 2.

Highly Phototoxic Transplatin-Modified Distyryl-BODIPY Photosensitizers for Photodynamic Therapy

We report the synthesis of the first transplatin-BODIPY conjugates for application in photodynamic therapy (PDT). The distyryl BODIPYs containing two iodine atoms were designed to absorb in the red region, easily undergo intersystem crossing for efficient singlet oxygen generation, and additionally offer the possibility for coordination with mono-activated transplatin. We were able to demonstrate that coordination of the BODIPYs with a mono-activated transplatin increases the phototoxic index of the photosensitizers significantly, giving rise to highly phototoxic distyryl BODIPY derivatives, of which one was shown to have the highest ever reported phototoxic index against any cell line. Furthermore, the photophysical mechanism of singlet oxygen generation in distyryl BODIPYs undergoing intramolecular charge transfer was studied experimentally and using time-dependent density functional theory.

A Series of Manganese(III) Salen Complexes as a Result of Team-Based Inquiry in a Transnational Education Programme

The development of a team-based approach to research-led transnational practical chemistry teaching is described in which a team of five Chinese students on an articulated transnational degree programme, supported by a team of academic and technical staff, carried out a study examining the structural chemistry of a series of manganese(III) salen complexes. A series of four crystallographically characterized manganese(III) salen complexes with ancillary carboxylate ligands are reported here. The carboxylate coordination modes range from the bridging syn-anti μ² -κO : κO' mode observed in the predominant cyclohexanoate and isobutyrate species, to a capping terminal monodentate mode for the adamantanoate species, and an unusual mixture of bridging and terminal coordination modes observed in a second minor phase of the cyclohexanoate species. The variation on extended structures based on the weakly interacting aliphatic backbones may provide a useful basis for further structural studies.

Encapsulated Nanodroplet Crystallization of Organic-Soluble Small Molecules

Single-crystal X-ray diffraction analysis (SCXRD) constitutes a universal approach for the elucidation of molecular structure and the study of crystalline forms. However, the discovery of viable crystallization conditions remains both experimentally challenging and resource intensive in both time and the quantity of analyte(s). We report a robot-assisted, high-throughput method for the crystallization of organic-soluble small molecules in which we employ only micrograms of analyte per experiment. This allows hundreds of crystallization conditions to be screened in parallel with minimal overall sample requirements. Crystals suitable for SCXRD are grown from nanoliter droplets of a solution of analyte in organic solvent(s), each of which is encapsulated within an inert oil to control the rate of solvent loss. This encapsulated nanodroplet crystallization methodology can also be used to search for new crystal forms, as exemplified through both our discovery of a new (13^th) polymorph of the olanzapine precursor ROY and SCXRD analysis of the “uncrystallizable” agrochemical dithianon.

•

Single crystals of small molecules are grown from nanoscale droplets of organic solvent

•

Discovery of the 13^th polymorph (R18) of olanzapine precursor ROY

•

X-ray diffraction analysis of “uncrystallizable” agrochemical dithianon

Small molecules can form crystalline solids, in which individual molecules pack together into ordered three-dimensional arrays. Once a suitable crystal is grown, the packing and atomic connectivity of the constituent molecules can be studied by X-ray diffraction. However, the discovery of experimental conditions for successful crystal growth is often challenging. We have developed a nanoscale crystallization technique for organic-soluble small molecules by using high-throughput liquid-handling robotics to undertake multiple crystallization experiments simultaneously with minimal sample requirements and high success rates. We showcase our methodology through the crystallization of a diverse set of small molecules, including “uncrystallizables,” combined with structural analysis by X-ray diffraction. We anticipate that this rapid and reliable method for small-molecule crystallization will have far-reaching impact, facilitating academic and industrial research in the molecular sciences.

Efficient synthesis of dipeptide analogues of α-fluorinated β-aminophosphonates

Herein, we present an efficient synthesis of dipeptide analogues of α-fluorinated β-aminophosphonates. Each step of the synthesis was optimized to provide excellent yields. Moreover, the absolute configuration of the obtained compounds was determined by X-ray analysis, which proved the stereochemistry that was proposed based on NMR studies.

FeIII -Salen-Based Probes for the Selective and Sensitive Detection of E450 in Foodstuff

Inorganic pyrophosphate (PPi) is considered as a diagnostic marker for various diseases such as cancer and vascular calcification. PPi also plays an important preservative role as an additive E450 in foodstuff. In this work, a selective Fe^III -salen-based probe for PPi is described; this probe disassembles in the presence of the target analyte into its molecular blocks, 1,2-propanediamine and 3-chloro-5-formyl-4-hydroxybenzenesulfonic acid. The latter signaling unit leads to a fluorometric response. Compared with a related prototype, the new complex shows a 2.3-times stronger emission at 500 nm and a 155-times better selectivity of PPi over adenosine triphosphate (ATP). Importantly, the new probe was successfully applied for detecting E450 in foodstuff.

Single crystal growth of water-soluble metal complexes with the help of the nano-crystallization method

Let pipetting robots set up nano crystallization trials of water-soluble metal complexes in order to obtain single crystals!

Palladium(ii) complexes bearing 1-iminothiolate-3,5-dimethylpyrazoles: synthesis, cytotoxicity, DNA binding and enzymatic inhibition studies

This work describes the enzymatic inhibitory activity of four novel Pd(ii) complexes towards topoisomerase IIα and cathepsins B and L.In silicostudies agree well with the enhancedin vitrocathepsin B inhibition induced by compound4(58% at 10 μM).

New Polyketides from the Marine-Derived Fungus Letendraea sp. 5XNZ4-2

Marine-derived fungi have been reported to have great potential to produce structurally unique metabolites. Our investigation on secondary metabolites from marine-derived fungi resulted in the isolation of seven new polyketides (phomopsiketones D–G (1–4) and letendronols A–C (5–7)) as well as one known xylarinol (8) in the cultural broth of Letendraea sp. Their structures and absolute configurations were elucidated using a set of spectroscopic and chemical methods, including HRESIMS, NMR, single-crystal X-ray diffraction, ECD calculation, and a modified version of Mosher’s method. Compound 2 showed weak inhibition against nitric oxide production in lipopolysaccaride-activated macrophages with an IC₅₀ value of 86 μM.

A Ru(II) polypyridyl complex bearing aldehyde functions as a versatile synthetic precursor for long-wavelength absorbing photodynamic therapy photosensitizers

The use of Photodynamic Therapy (PDT) for the treatment of several kinds of cancer as well as bacterial, fungal or viral infections has received increasing attention during the last decade. However, the currently clinically approved photosensitizers (PSs) have several drawbacks, including photobleaching, slow clearance from the organism and poor water solubility. To overcome these shortcomings, many efforts have been made in the development of new types of PSs, such as Ru(II) polypyridyl complexes. Nevertheless, most studied Ru(II) polypyridyl complexes have a low absorbance in the spectral therapeutic window. In this work, we show that, by carefully selecting substituents on the polypyridyl complex, it is possible to prepare a complex absorbing at a much higher wavelength. Specifically, we report on the synthesis as well as in-depth experimental and theoretical characterisation of a Ru(II) polypyridyl complex (complex 3) combining a shift in absorbance towards the spectral therapeutic window with a high ¹O₂ production. To overcome the absence or poor selectivity of most approved PSs into targeted cells/bacteria, they can be linked to targeting moieties. In this line, compound 3 was designed with reactive aldehyde groups, which can be used as a highly versatile synthetic precursor for further conjugation. As a proof of concept, 3 was reacted with benzylamine and the stability of the resulting conjugate 4 was investigated in DMSO, PBS and cell media. 4 showed an impressive ability to act as a PDT PS with no measurable dark cytotoxicity and photocytotoxicity in the low micromolar range against cancerous HeLa cells from 450 nm up to 540 nm.

Optimizing the Fluorescence Properties of Nanoemulsions for Single Particle Tracking in Live Cells

Nanoemulsions (NEs) are biocompatible lipid nanoparticles composed of an oily core stabilized by a surfactant shell. It is acknowledged that the surface decoration with poly(ethylene glycol), through the use of nonionic surfactants, confers high stealth in biological medium with reduced nonspecific interactions. Tracking individual NE by fluorescence microscopy techniques would lead to a better understanding of their behavior in cells and thus require the development of bright single particles with enhanced photostability. However, the understanding of the relationship between the physicochemical properties and chemical composition of the NEs, on the one hand, and its fluorescence properties of encapsulated dyes, on the other hand, remains limited. Herein, we synthesized three new dioxaborine barbituryl styryl (DBS) dyes that displayed high molar extinction coefficients (up to 120 000 M^-1 cm^-1) with relatively low quantum yields in solvents and impressive fluorescence enhancement when dissolved in viscous oils (up to 0.98). The reported screening of nine different oils allowed disclosing a range of efficient "oil/dye" couples and understanding the main parameters that lead to the brightest NEs. We determine vitamin E acetate/DBS-C₈ as the representative most efficient couple, combining high dye loading capabilities and low aggregation-induced quenching, leading to <50 nm ultrabright NEs (with brightness as high as 30 × 10⁶ M^-1 cm^-1) with negligible dye leakage in biological media. Beyond a comprehensive optical and physicochemical characterization of fluorescent NEs, cellular two-photon excitation imaging was performed with polymer-coated cell penetrating NEs. Thanks to their impressive brightness and photostability, NEs displaying different charge surfaces were microinjected in HeLa cells and were individually tracked in the cytosol to study their relative velocity.

A quantitative study of vapor diffusions for crystallizations: rates and solvent parameter changes

Vapor diffusion crystallizations are among the most versatile methods for growing X-ray quality crystals. While many experimental sections describe the successful use of various solvent combinations, the literature has been entirely lacking in quantitative data (rates, measures of solvent strength changes) that might allow more informed planning rather than simple trial-and-error approaches. We here report the diffusion-induced volume changes for 44 solvent combinations over the first 60 h under standardized conditions, plus six more combinations that exhibit little or no volume changes. Additionally, the inner and outer vial compositions at 24 h were determined, and the resulting changes in solvation parameters were quantified using Hansen solubility parameters. Some general preliminary effects of changes in volume ratios and scale are described. These results identify two dozen solvent combinations with larger changes in solvent parameters than the very commonly used diethyl ether/dichloromethane example. These results should allow a more informed approach to the execution of vapor diffusion crystallizations than has previously been possible.

Synthesis, structure and photophysical properties of a 2D network with gold dicyanide donors coordinated to aza[5]helicene viologen acceptors

Investigation of a gold-heli viologen network shows the presence of [Au(CN)₂]⁻ dimers and monomers within the 2D framework, and quenching of the [Au(CN)₂]⁻ luminescence by the helicene.

Synthesis of new betulinic acid/betulin-derived dimers and hybrids with potent antimalarial and antiviral activities

Severe malaria and viral infections cause life-threatening diseases in millions of people worldwide every year. In search for effective bioactive hybrid molecules, which may possess improved properties compared to their parent compounds, a series of betulinic acid/betulin based dimer and hybrid compounds carrying ferrocene and/or artesunic acid moieties, was designed and, synthesized de novo. Furthermore, they were analyzed in vitro against malaria parasites (growth inhibition of 3D7-strain P. falciparum-infected erythrocytes) and human cytomegalovirus (HCMV). From this series of hybrids/dimers, the betulinic acid/betulin and artesunic acid hybrids 11 and 12 showed the most potent activities against P. falciparum and HCMV. On the strength of results, additive and/or synergistic effects between the natural or semisynthetic products, such as betulinic acid-/betulin- and artesunic acid-derived compounds, are suggested on the basis of putatively complex modes of antimicrobial action. This advantage may be taken into account in future drug development.

Enhanced Understanding of Pharmaceutical Materials Through Advanced Characterisation and Analysis

The impact of pharmaceutical materials properties on drug product quality and manufacturability is well recognised by the industry. An ongoing effort across industry and academia, the Manufacturing Classification System consortium, aims to gather the existing body of knowledge in a common framework to provide guidance on selection of appropriate manufacturing technologies for a given drug and/or guide optimization of the physical properties of the drug to facilitate manufacturing requirements for a given processing route. Simultaneously, material scientists endeavour to develop characterisation methods such as size, shape, surface area, density, flow and compactibility that enable a stronger understanding of materials powder properties. These properties are routinely tested drug product development and advances in instrumentation and computing power have enabled novel characterisation methods which generate larger, more complex data sets leading to a better understanding of the materials. These methods have specific requirements in terms of data management and analysis. An appropriate data management strategy eliminates time-consuming data collation steps and enables access to data collected for multiple methods and materials simultaneously. Methods ideally suited to extract information from large, complex data sets such as multivariate projection methods allow simpler representation of the variability contained within the data and easier interpretation of the key information it contains. In this review, an overview of the current knowledge and challenges introduced by modern pharmaceutical material characterisation methods is provided. Two case studies illustrate how the incorporation of multivariate analysis into the material sciences workflow facilitates a better understanding of materials.

Access to new highly potent antileukemia, antiviral and antimalarial agents via hybridization of natural products (homo)egonol, thymoquinone and artemisinin

Hybridization of natural products has high potential to further improve their activities and may produce synergistic effects between linked pharmacophores. Here we report synthesis of nine new hybrids of natural products egonol, homoegonol, thymoquinone and artemisinin and evaluation of their activities against P. falciparum 3D7 parasites, human cytomegalovirus, sensitive and multidrug-resistant human leukemia cells. Most of the new hybrids exceed their parent compounds in antimalarial, antiviral and antileukemia activities and in some cases show higher in vitro efficacy than clinically used reference drugs chloroquine, ganciclovir and doxorubicin. Combined, our findings stress the high potency of these hybrids and encourages further use of the hybridization concept in applied pharmacological research.

From a square core to square opening: structural diversity and magnetic properties of the oxo-bridged [CrIIINbV] complexes

Three heterometallic oxo-bridged compounds, [Cr₂(phen)₄(μ-O)₄Nb₂(C₂O₄)₄]·2H₂O (1; phen = 1,10-phenanthroline), [Cr₂(terpy)₂(H₂O)₂(μ-O)₄Nb₂(C₂O₄)₄]·4H₂O (2; terpy = 2,2';6',2''-terpyridine) and [Cr(terpy)(C₂O₄)(H₂O)][Cr₂(terpy)₂(C₂O₄)₂(μ-O)₂Nb(C₂O₄)₂]·3H₂O (3), have been synthesized using a building block approach and characterized by IR spectroscopy, single-crystal and powder X-ray diffraction, magnetization measurements, and DFT calculations. The molecular structures of 1 and 2, crystallizing in P4₂2₁2 and P2₁/n space groups, respectively, contain a square-shaped {Cr(μ-O)₄Nb} unit, while that of complex salt 3 (P1[combining macron] space group) consists of a mononuclear cation containing Cr^III and trinuclear anions in which two Cr^III ions are bridged by a -O-Nb^V-O- fragment. Besides hydrogen-bonding patterns resulting in a 1D- or 3D-supramolecular arrangement in 1-3, an unusual intermolecular contact has been noticed between parallel oxalate moieties occurring due to the electrostatic attraction of electron-rich carbonyl oxygen and severely electron-depleted carbon atoms in the crystal packing of 2. The antiferromagnetic coupling observed in all three compounds, determined from magnetization measurements (J = -13.51(2), -8.41(1) and -7.44(4) cm^-1 for 1, 2 and 3, respectively) and confirmed by DFT calculations, originates from two Cr^III ions with spin 3/2 interacting through diamagnetic -O-Nb^V-O- bridge(s).

A high throughput screening method for the nano-crystallization of salts of organic cations

The generation of solid salts of organic molecules is important to the chemical and pharmaceutical industry. Commonly used salt screening methods consume a lot of resources. We employed a combination of ion exchange screening and vapour diffusion for crystallization. This technique is semi-automatic and requires just nanoliters of the solution of the analyte to be crystallized. This high throughput screening yielded single crystals of sufficient size and quality for single-crystal X-ray structure determination using an in-house X-ray diffractometer. The broad scope of our method has been shown by challenging it with 7 very different organic cations, whose aqueous solubilities vary by a factor of almost 1000. At least one crystal structure for 6 out of 7 tested cations was determined; 4 out of the successful 6 ones had never been crystallized before. Our method is extremely attractive for high throughput salt screening, especially for active pharmaceutical ingredients (APIs), as about 40% of all APIs are cationic salts. Additionally, our screening is a new and very promising procedure for the crystallization of salts of organic cations.

Ultrabright and Fluorogenic Probes for Multicolor Imaging and Tracking of Lipid Droplets in Cells and Tissues

Lipid droplets (LDs) are intracellular lipid-rich organelles that regulate the storage of neutral lipids and were recently found to be involved in many physiological processes, metabolic disorders, and diseases including obesity, diabetes, and cancers. Herein we present a family of new fluorogenic merocyanine fluorophores based on an indolenine moiety and a dioxaborine barbiturate derivative. These so-called StatoMerocyanines (SMCy) fluoresce from yellow to the near-infrared (NIR) in oil with an impressive fluorescence enhancement compared to aqueous media. Additionally, SMCy display remarkably high molar extinction coefficients (up to 390 000 M^-1 cm^-1) and high quantum yield values (up to 100%). All the members of this new family specifically stain the LDs in live cells with very low background noise. Unlike Nile Red, a well-known lipid droplet marker, SMCy dyes possess narrow absorption and emission bands in the visible, thus allowing multicolor imaging. SMCy proved to be compatible with fixation and led to high-quality 3D images of lipid droplets in cells and tissues. Their high brightness allowed efficient tissue imaging of adipocytes and circulating LDs. Moreover their remarkably high two-photon absorption cross-section, especially SMCy5.5 (up to 13 300 GM), as well as their capacity to efficiently fluoresce in the NIR region led to two-photon multicolor tissue imaging (liver). Taking advantage of the available color palette, lipid droplet exchange between cells was tracked and imaged, thus demonstrating intercellular communication.

Cyclometalated ruthenium complexes with carboxylated ligands from a combined experimental/computational perspective

The syntheses and characterization of nine new cyclometalated ruthenium complexes are reported. These structures consist of Ru(ii) with bipyridine and phenylpyridine ligands which are substituted with ester or carboxylate groups. Two of the complexes were extensively studied and their properties were compared to those of two previously reported structures. The identities of the compounds were confirmed by NMR, HR-MS and single crystal XRD, and the electronic properties were investigated by UV-Vis spectroscopy. DFT and TD-DFT calculations showed that the intense absorbances in the visible region of the spectrum of these cyclometalated complexes are due to electronic excitations to virtual orbitals located on the carboxylated ligands. These results indicate that the compounds are promising candidates as sensitizers for more efficient photocatalysis with sunlight. Further, the carboxylate groups should facilitate their use as linkers in metal-organic frameworks.

A salt or a co-crystal – when crystallization protocol matters

By controlling nucleation and growth through choice of crystallization conditions, the stable co-crystal or metastable salt can be reproducibly obtained in accordance with Ostwald's rule of stages and the concept of ‘disappearing polymorphs’.

Two-dimensional metal–organic framework nanosheets: synthesis and applications

Synthesis and applications of two-dimensional metal–organic framework nanosheets and their composites are summarized.