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Hajihassan Z, Ghaee A, Bazargannia P, Salmani Shahrivar E. Affinity purification/immobilization of poly histidine-tagged proteins by nickel-functionalized porous chitosan membranes. J Chromatogr A 2024; 1722:464902. [PMID: 38636150 DOI: 10.1016/j.chroma.2024.464902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Revised: 03/27/2024] [Accepted: 04/09/2024] [Indexed: 04/20/2024]
Abstract
Although immobilized metal ion affinity chromatography (IMAC) is one of the most effective methods for purifying his-tagged proteins, it has limitations such as expensive commercial resins and non-specific binding of unwanted proteins to the nickel immobilized on the resin. In this study, biocompatible chitosan and porous chitosan membranes as alternative resins were synthesized for protein immobilization and purification, but finally porous chitosan membrane was selected due to its higher porosity and consequently higher nickel adsorption. Once the membrane was functionalized with nickel ions and its metal adsorption confirmed by EDS and ICP methods, it was used to immobilize and purify recombinant β-NGF as a protein model with his-tag tail in batch-fashion. Protein binding and purification were also approved by FTIR and UV-Vis spectroscopy and SDS-PAGE technique. Our results indicated that the protein of interest could bind to the nickel-functionalized porous chitosan membrane with high efficiency at pH=7. Furthermore, for protein purification, the pH value of 6 and an imidazole concentration of 750 mM were suggested for the final elution buffer. In conclusion, nickel-functionalized porous chitosan membrane could be a suitable alternative to IMAC for low cost and specific protein immobilization and purification.
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Affiliation(s)
- Zahra Hajihassan
- School of Life Science Engineering, College of Interdisciplinary Science and Technology, University of Tehran, Tehran, Iran.
| | - Azadeh Ghaee
- School of Life Science Engineering, College of Interdisciplinary Science and Technology, University of Tehran, Tehran, Iran.
| | - Parisa Bazargannia
- School of Life Science Engineering, College of Interdisciplinary Science and Technology, University of Tehran, Tehran, Iran
| | - Elahe Salmani Shahrivar
- School of Life Science Engineering, College of Interdisciplinary Science and Technology, University of Tehran, Tehran, Iran
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2
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Shariati A, Hosseinzadeh SA, Barghi Z, Mortazavi SS, Atarod K, Shariati FS, Farahmand B. Synthesis of Ni 2+-functionalized polydopamine magnetic beads for facilitated purification of histidine-tagged proteins. AMB Express 2023; 13:112. [PMID: 37833506 PMCID: PMC10575826 DOI: 10.1186/s13568-023-01613-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2023] [Accepted: 09/24/2023] [Indexed: 10/15/2023] Open
Abstract
Facilitated purification of proteins, at a low cost and a short time, is one of the key steps in the industrial production of recombinant proteins. In the current study, polydopamine nanoparticles (PDA-NPs) are considered in the synthesis of magnetic beads for purifying recombinant proteins due to advantages such as biocompatibility/ biodegradability, easy synthesis, as well as the ability to directly chelate metal ions. They were synthesized in Tris buffer (pH: 8:5), then chelated with Fe3+(20 mg) and Ni2+ ions at concentrations of 2, 3, 5, and 7 mg/ml. Prepared nanoparticles were characterized through scanning electron microscopy (SEM), ultraviolet-visible spectroscopy (UV-vis), dynamic light scattering (DLS), Inductively Coupled Plasma (ICP), and vibrating sample magnetometer (VSM). The size distribution of the particles was reported in the narrow range of 120-140 nm and 200 to 220 nm by the SEM image and DLS analysis, respectively. The chelation of ions on the surface of the nanoparticle was confirmed by the ICP technique with a magnetization of 35.42 emu/g. The highest adsorption rate of Ni2+ ions to polydopamine was obtained at a ratio of 1.4. The SDS-PAGE and western blot analysis confirmed the purification of eGFP and Hsp40 by PDA/Fe3+/Ni2+ at 26 and 40 kDa compared to the commercial nickel column. Moreover, the concentration of purified eGFP by PDA/Fe3+/Ni2+ was reported 138.83 µg/ml by the fluorescent signals, which is almost equal to or more than the protein purified by commercial Ni-NTA column (108.28 µg/ ml). The stability of PDA/Fe3+/Ni2+ has also been evaluated by ICP-OES for 10 days, and the result suggested that PDA magnetic beads were stable. Therefore, it can be concluded that PDA/Fe3+/Ni2+ have the ability to purify recombinant proteins in one less step and shorter time.
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Affiliation(s)
- Alireza Shariati
- Department of Materials Engineering, Tarbiat Modares University, P.O. Box 14115-143, Tehran, Iran
| | - Sara Ali Hosseinzadeh
- Department of Nanobiotechnology, New Technologies Research Group, Pasteur Institute of Iran, Tehran, Iran
| | - Zahra Barghi
- Infuenza Research Lab, Pasteur Institute of Iran, Tehran, Iran
| | - Sogand Sadat Mortazavi
- Farzanegan high school, National Organization for Development of Exceptional Talents, Tehran, Iran
| | - Kosar Atarod
- Farzanegan high school, National Organization for Development of Exceptional Talents, Tehran, Iran
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3
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Amirahmadi M, Hosseinkhani S, Hosseini M, Yaghmei P, Heydari A. Fe 3O 4@SiO 2@NiAl-LDH microspheres implication in separation, kinetic and structural properties of phenylalanine dehydrogenase. Heliyon 2023; 9:e19429. [PMID: 37809670 PMCID: PMC10558515 DOI: 10.1016/j.heliyon.2023.e19429] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Revised: 08/12/2023] [Accepted: 08/22/2023] [Indexed: 10/10/2023] Open
Abstract
Fe3O4@SiO2@NiAl-LDH three-components microsphere contains a Fe3O4@SiO2 magnetic core and a layered double hydroxide with nickel cation provide the binding ability to (His)-tagged-protein and exhibits high performance in protein separation and purification. The morphology and chemistry of the synthesized Fe3O4@SiO2@NiAl-LDH microspheres were characterized by energy-dispersive X-ray spectroscopy (EDX), scanning electron microscopy (SEM), X-ray diffraction (XRD), Fourier transform infrared (FTIR), vibrating sample magnetometer (VSM), Dynamic light scattering (DLS). Purified enzyme was assesed with SDS-PAGE (sodium dodecyl sulfate-polyacrylamide gel electrophoresis and intrinsic fluorescence spectroscopy. In this study, the separation of phenylalanine dehydrogenase (PheDH) by Fe3O4@SiO2@NiAl -LDH was performed and the effect of microsphere was investigated on the kinetic and structural properties of PheDH. After purification, kinetic parameters such as Km, Vmax, Kcat, kcat/Km, optimum temperature, thermal stability, and and activation energy were evaluated and compared according to the mentioned methods. The interaction between the enzyme and the microsphere displayed a high performance in protein binding capacity. The results also revealed that the kinetic parameters of the enzyme changed in a dose-dependent manner in the presence of a microsphere. Moreover, the results of intrinsic fluorescence and Circular Dichroism (CD) confirmed the structural changes of the protein in the interaction with the microsphere.
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Affiliation(s)
- Mozhgan Amirahmadi
- Department of Biochemistry, Faculty of Basic Sciences, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Saman Hosseinkhani
- Department of Biochemistry, Faculty of Biological Sciences, Tarbiat Modares University, Tehran 14115-175, Iran
| | - Morteza Hosseini
- Department of Life Science Engineering, Faculty of New Sciences & Technologies, University of Tehran, Tehran 1417614418, Iran
| | - Paricher Yaghmei
- Department of Biochemistry, Faculty of Basic Sciences, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Akbar Heydari
- Chemistry Department, Tarbiat Modares University, P.O. Box 14155-4838, Tehran, Iran
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4
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Leonhardt F, Gennari A, Paludo GB, Schmitz C, da Silveira FX, Moura DCDA, Renard G, Volpato G, Volken de Souza CF. A systematic review about affinity tags for one-step purification and immobilization of recombinant proteins: integrated bioprocesses aiming both economic and environmental sustainability. 3 Biotech 2023; 13:186. [PMID: 37193330 PMCID: PMC10182917 DOI: 10.1007/s13205-023-03616-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2023] [Accepted: 05/06/2023] [Indexed: 05/18/2023] Open
Abstract
The present study reviewed and discussed the promising affinity tags for one-step purification and immobilization of recombinant proteins. The approach used to structure this systematic review was The Preferred Reporting Items for Systematic Review and Meta-analysis (PRISMA) methodology. The Scopus and Web of Science databases were used to perform the bibliographic survey by which 267 articles were selected. After the inclusion/exclusion criteria and the screening process, from 25 chosen documents, we identified 7 types of tags used in the last 10 years, carbohydrate-binding module tag (CBM), polyhistidine (His-tag), elastin-like polypeptides (ELPs), silaffin-3-derived pentalysine cluster (Sil3k tag), N-acetylmuramidase (AcmA tag), modified haloalkane dehalogenase (HaloTag®), and aldehyde from a lipase polypeptide (Aldehyde tag). The most used bacterial host for expressing the targeted protein was Escherichia coli and the most used expression vector was pET-28a. The results demonstrated two main immobilization and purification methods: the use of supports and the use of self-aggregating tags without the need of support, depending on the tag used. Besides, the chosen terminal for cloning the tag proved to be very important once it could alter enzyme activity. In conclusion, the best tag for protein one-step purification and immobilization was CBM tag, due to the eco-friendly supports that can be provided from industry wastes, the fast immobilization with high specificity, and the reduced cost of the process.
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Affiliation(s)
- Fernanda Leonhardt
- Food Biotechnology Laboratory, Graduate Program in Biotechnology, University of Vale do Taquari, Univates, Av. Avelino Tallini, 171, Lajeado, RS ZC 95914-014 Brazil
| | - Adriano Gennari
- Food Biotechnology Laboratory, Graduate Program in Biotechnology, University of Vale do Taquari, Univates, Av. Avelino Tallini, 171, Lajeado, RS ZC 95914-014 Brazil
| | - Graziela Barbosa Paludo
- Food Biotechnology Laboratory, Graduate Program in Biotechnology, University of Vale do Taquari, Univates, Av. Avelino Tallini, 171, Lajeado, RS ZC 95914-014 Brazil
| | - Caroline Schmitz
- Food Biotechnology Laboratory, Graduate Program in Biotechnology, University of Vale do Taquari, Univates, Av. Avelino Tallini, 171, Lajeado, RS ZC 95914-014 Brazil
| | - Filipe Xerxeneski da Silveira
- Federal Institute of Education, Science, and Technology of Rio Grande do Sul, IFRS, Porto Alegre Campus, Porto Alegre, RS Brazil
| | | | - Gaby Renard
- Quatro G Pesquisa & Desenvolvimento Ltda, Porto Alegre, RS Brazil
| | - Giandra Volpato
- Federal Institute of Education, Science, and Technology of Rio Grande do Sul, IFRS, Porto Alegre Campus, Porto Alegre, RS Brazil
| | - Claucia Fernanda Volken de Souza
- Food Biotechnology Laboratory, Graduate Program in Biotechnology, University of Vale do Taquari, Univates, Av. Avelino Tallini, 171, Lajeado, RS ZC 95914-014 Brazil
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5
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Çambay Kuban F, Koçer İ, Kip Ç, Çelik E, Tuncel A. Ni(II) functionalized polyhedral oligomeric silsesquioxane based capillary monolith for purification of histidine-tagged proteins by immobilized metal affinity micro-chromatography. J Chromatogr B Analyt Technol Biomed Life Sci 2023; 1225:123759. [PMID: 37216763 DOI: 10.1016/j.jchromb.2023.123759] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2023] [Revised: 04/13/2023] [Accepted: 05/14/2023] [Indexed: 05/24/2023]
Abstract
A new capillary monolithic stationary phase was synthesized for the purification of histidine tagged proteins by immobilized metal affinity micro-chromatography (μ-IMAC). For this purpose, mercaptosuccinic acid (MSA) linked-polyhedral oligomeric silsesquioxane [MSA@poly(POSS-MA)] monolith 300 μm in diameter was obtained by thiol-methacrylate polymerization using methacryl substituted-polyhedral oligomeric silsesquioxane (POSS-MA) and MSA as the thiol functionalized agent in a fused silica capillary tubing. Ni(II) cations were immobilized onto the porous monolith via metal-chelate complex formation with double carboxyl functionality of bound MSA segments. μ-IMAC separations aiming the purification of histidine tagged-green fluorescent protein (His-GFP) from Escherichia coli extract were carried out on Ni(II)@MSA functionalized-poly(POSS-MA) [Ni(II)@MSA@poly(POSS-MA)] capillary monolith. His-GFP was succesfully isolated by μ-IMAC on Ni(II)@MSA@poly(POSS-MA) capillary monolith with the isolation yield of 85 % and the purity of 92 % from E. coli extract. Higher His-GFP isolation yields were obtained with lower His-GFP feed concentrations and lower feed flow rates. The monolith was used for consecutive His-GFP purifications with a tolerable decrease in equilibrium His-GFP adsorption over five runs.
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Affiliation(s)
- Fatma Çambay Kuban
- Hacettepe University, Graduate School of Science and Engineering, Division of Bioengineering, Ankara, Turkey
| | - İlkay Koçer
- Hacettepe University, Chemical Engineering Department, Ankara, Turkey
| | - Çiğdem Kip
- Hacettepe University, Chemical Engineering Department, Ankara, Turkey
| | - Eda Çelik
- Hacettepe University, Graduate School of Science and Engineering, Division of Bioengineering, Ankara, Turkey; Hacettepe University, Chemical Engineering Department, Ankara, Turkey
| | - Ali Tuncel
- Hacettepe University, Graduate School of Science and Engineering, Division of Bioengineering, Ankara, Turkey; Hacettepe University, Chemical Engineering Department, Ankara, Turkey.
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6
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Ivanoska-Dacikj A, Oguz-Gouillart Y, Hossain G, Kaplan M, Sivri Ç, Ros-Lis JV, Mikucioniene D, Munir MU, Kizildag N, Unal S, Safarik I, Akgül E, Yıldırım N, Bedeloğlu AÇ, Ünsal ÖF, Herwig G, Rossi RM, Wick P, Clement P, Sarac AS. Advanced and Smart Textiles during and after the COVID-19 Pandemic: Issues, Challenges, and Innovations. Healthcare (Basel) 2023; 11:healthcare11081115. [PMID: 37107948 PMCID: PMC10137734 DOI: 10.3390/healthcare11081115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Revised: 03/28/2023] [Accepted: 04/02/2023] [Indexed: 04/29/2023] Open
Abstract
The COVID-19 pandemic has hugely affected the textile and apparel industry. Besides the negative impact due to supply chain disruptions, drop in demand, liquidity problems, and overstocking, this pandemic was found to be a window of opportunity since it accelerated the ongoing digitalization trends and the use of functional materials in the textile industry. This review paper covers the development of smart and advanced textiles that emerged as a response to the outbreak of SARS-CoV-2. We extensively cover the advancements in developing smart textiles that enable monitoring and sensing through electrospun nanofibers and nanogenerators. Additionally, we focus on improving medical textiles mainly through enhanced antiviral capabilities, which play a crucial role in pandemic prevention, protection, and control. We summarize the challenges that arise from personal protective equipment (PPE) disposal and finally give an overview of new smart textile-based products that emerged in the markets related to the control and spread reduction of SARS-CoV-2.
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Affiliation(s)
- Aleksandra Ivanoska-Dacikj
- Research Centre for Environment and Materials, Macedonian Academy of Sciences and Arts, Krste Misirkov 2, 1000 Skopje, North Macedonia
| | - Yesim Oguz-Gouillart
- Department of Building and Urban Environment, Innovative Textile Material, JUNIA, 59000 Lille, France
| | - Gaffar Hossain
- V-Trion GmbH Textile Research, Millennium Park 15, 6890 Lustenau, Austria
| | - Müslüm Kaplan
- Department of Textile Engineering, Faculty of Engineering, Architecture and Design, Bartin University, Bartin 74110, Turkey
| | - Çağlar Sivri
- Management Engineering Department, Faculty of Engineering and Natural Sciences, Bahcesehir University, İstanbul 34349, Turkey
| | - José Vicente Ros-Lis
- Centro de Reconocimiento Molecular y Desarrollo Tecnologico (IDM), Unidad Mixta Universitat Politecnica de Valencia, Universitat de Valencia, Departamento de Química Inorgánica, Universitat de València, Doctor Moliner 56, 46100 Valencia, Spain
| | - Daiva Mikucioniene
- Faculty of Mechanical Engineering and Design, Kaunas University of Technology, Studentu Str. 56, 50404 Kaunas, Lithuania
| | - Muhammad Usman Munir
- Faculty of Mechanical Engineering and Design, Kaunas University of Technology, Studentu Str. 56, 50404 Kaunas, Lithuania
| | - Nuray Kizildag
- Institute of Nanotechnology, Gebze Technical University, Gebze, Kocaeli 41400, Turkey
- Integrated Manufacturing Technologies Research and Application Center, Sabanci University, Pendik, Istanbul 34906, Turkey
| | - Serkan Unal
- Integrated Manufacturing Technologies Research and Application Center, Sabanci University, Pendik, Istanbul 34906, Turkey
- Faculty of Engineering and Natural Sciences, Material Science and Nanoengineering, Sabanci University, Tuzla, Istanbul 34956, Turkey
| | - Ivo Safarik
- Department of Nanobiotechnology, Biology Centre, ISBB, CAS, Na Sadkach 7, 370 05 Ceske Budejovice, Czech Republic
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute, Palacky University, Slechtitelu 27, 783 71 Olomouc, Czech Republic
| | - Esra Akgül
- Department of Industrial Design Engineering, Faculty of Engineering, Erciyes University, Kayseri 38039, Turkey
| | - Nida Yıldırım
- Trabzon Vocational School, Karadeniz Technical University, Trabzon 61080, Turkey
| | - Ayşe Çelik Bedeloğlu
- Department of Polymer Materials Engineering, Faculty of Engineering and Natural Sciences, Bursa Technical University, Bursa 16310, Turkey
| | - Ömer Faruk Ünsal
- Department of Polymer Materials Engineering, Faculty of Engineering and Natural Sciences, Bursa Technical University, Bursa 16310, Turkey
| | - Gordon Herwig
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Laboratory for Biomimetic Membranes and Textiles, 9014 St. Gallen, Switzerland
| | - René M Rossi
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Laboratory for Biomimetic Membranes and Textiles, 9014 St. Gallen, Switzerland
| | - Peter Wick
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Laboratory for Particle-Biology Interactions, 9014 St. Gallen, Switzerland
| | - Pietro Clement
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Laboratory for Particle-Biology Interactions, 9014 St. Gallen, Switzerland
| | - A Sezai Sarac
- Department of Chemistry, Polymer Science and Technology, Faculty of Sciences and Letters, Istanbul Technical University, Istanbul 34469, Turkey
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Wang M, Zhou J, Fa S, Zhang Q. Synergetic Enhancement: Imprinted Magnetic Microspheres Based on the Thiol-ene-amine Conjugation and Metal Coordination for Selective Recognition of BSA. Colloids Surf A Physicochem Eng Asp 2023. [DOI: 10.1016/j.colsurfa.2023.131256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/18/2023]
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8
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Kumar P, Sharma N, Ahmed MA, Verma AK, Umaraw P, Mehta N, Abubakar AA, Hayat MN, Kaka U, Lee SJ, Sazili AQ. Technological interventions in improving the functionality of proteins during processing of meat analogs. Front Nutr 2022; 9:1044024. [PMID: 36601080 PMCID: PMC9807037 DOI: 10.3389/fnut.2022.1044024] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Accepted: 12/02/2022] [Indexed: 12/24/2022] Open
Abstract
Meat analogs have opened a new horizon of opportunities for developing a sustainable alternative for meat and meat products. Proteins are an integral part of meat analogs and their functionalities have been extensively studied to mimic meat-like appearance and texture. Proteins have a vital role in imparting texture, nutritive value, and organoleptic attributes to meat analogs. Processing of suitable proteins from vegetable, mycoproteins, algal, and single-cell protein sources remains a challenge and several technological interventions ranging from the isolation of proteins to the processing of products are required. The present paper reviews and discusses in detail various proteins (soy proteins, wheat gluten, zein, algal proteins, mycoproteins, pulses, potato, oilseeds, pseudo-cereals, and grass) and their suitability for meat analog production. The review also discusses other associated aspects such as processing interventions that can be adapted to improve the functional and textural attributes of proteins in the processing of meat analogs (extrusion, spinning, Couette shear cell, additive manufacturing/3D printing, and freeze structuring). '.
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Affiliation(s)
- Pavan Kumar
- Institute of Tropical Agriculture and Food Security, Universiti Putra Malaysia (UPM), Seri Kembangan, Malaysia
- Department of Livestock Products Technology, College of Veterinary Science, Guru Angad Dev Veterinary and Animal Sciences University, Ludhiana, India
| | - Neelesh Sharma
- Division of Veterinary Medicine, Faculty of Veterinary Sciences and Animal Husbandry, Sher-e-Kashmir University of Agricultural Sciences and Technology of Jammu, Jammu, India
| | - Muideen Adewale Ahmed
- Institute of Tropical Agriculture and Food Security, Universiti Putra Malaysia (UPM), Seri Kembangan, Malaysia
| | - Akhilesh K. Verma
- Department of Livestock Products Technology, College of Veterinary and Animal Sciences, Sardar Vallabhbhai Patel University of Agriculture and Technology, Meerut, India
| | - Pramila Umaraw
- Department of Livestock Products Technology, College of Veterinary and Animal Sciences, Sardar Vallabhbhai Patel University of Agriculture and Technology, Meerut, India
| | - Nitin Mehta
- Department of Livestock Products Technology, College of Veterinary Science, Guru Angad Dev Veterinary and Animal Sciences University, Ludhiana, India
| | - Ahmed Abubakar Abubakar
- Institute of Tropical Agriculture and Food Security, Universiti Putra Malaysia (UPM), Seri Kembangan, Malaysia
| | - Muhammad Nizam Hayat
- Department of Animal Science, Faculty of Agriculture, Universiti Putra Malaysia, Seri Kembangan, Malaysia
| | - Ubedullah Kaka
- Department of Companion Animal Medicine and Surgery, Faculty of Veterinary Medicine, Universiti Putra Malaysia, Seri Kembangan, Malaysia
| | - Sung-Jin Lee
- Department of Applied Animal Science, College of Animal Life Sciences, Kangwon National University, Chuncheon-si, South Korea
| | - Awis Qurni Sazili
- Department of Animal Science, Faculty of Agriculture, Universiti Putra Malaysia, Seri Kembangan, Malaysia
- Halal Products Research Institute, Putra Infoport, Universiti Putra Malaysia, Seri Kembangan, Malaysia
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Preparation of nickel-chelated iminodiacetate-functionalized macroporous agarose monolith using modular and clickable building blocks for affinity separation of histidine-tagged recombinant proteins. J Chromatogr A 2022; 1682:463509. [PMID: 36155074 DOI: 10.1016/j.chroma.2022.463509] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Revised: 08/14/2022] [Accepted: 09/15/2022] [Indexed: 11/23/2022]
Abstract
Selective separation and purification of protein from complex medium is required to completely investigate the structure and function of the target protein. In this study, a composite macroporous agarose monolith containing iminodiacetate-chelated Ni2+ ligands was synthesized for selective separation and purification of histidine-tagged recombinant proteins. The large and interconnected pores in the monolith enabled fast binding of proteins with high matrix tolerance in treating complex mediums. To realize the selective protein binding, the iminodiacetate was directly conjugated to epoxy-functionalized agarose monolith via simple chemical reactions between epoxy and imino groups. After chelated Ni2+, the composite monolith could bind histidine-tagged recombinant proteins through the coordination interaction between transition metal ions and the imidazole ring of histidine. To further increase the binding capacities of the monolith, a hydrophilic intermediate polymer chain containing multiple iminodiacetate immobilization sites was conjugated to the azide-functionalized agarose monolith via Cu(I)-catalyzed azide-alkyne cycloaddition (CuAAC) reaction. The morphology and chemical composition of the composite agarose monolith were characterized systematically. The protein binding capacities of the obtained composite agarose monolith were subsequently investigated. The binding capacities of the composite agarose monolith towards the model proteins Gp10 and Lys84 were 0.93 and 0.51 mg/mL, respectively. The protein binding of the composite agarose monolith could be manipulated by adjusting the temperature and concentrations of imidazole. These results demonstrate that the composite agarose monolith could be used as an affinity medium for rapid separation and purification of histidine-tagged recombinant proteins from biological samples.
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10
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Functionalization of chitosan by metformin, nickel metal ions and magnetic nanoparticles as a nanobiocomposite for purification of alkaline phosphatase from hen's egg yolk. J Chromatogr A 2022; 1679:463376. [DOI: 10.1016/j.chroma.2022.463376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Revised: 07/13/2022] [Accepted: 07/25/2022] [Indexed: 12/07/2022]
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11
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Freitas AI, Domingues L, Aguiar TQ. Tag-mediated single-step purification and immobilization of recombinant proteins toward protein-engineered advanced materials. J Adv Res 2022; 36:249-264. [PMID: 35127175 PMCID: PMC8799874 DOI: 10.1016/j.jare.2021.06.010] [Citation(s) in RCA: 33] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Revised: 06/08/2021] [Accepted: 06/10/2021] [Indexed: 12/12/2022] Open
Abstract
Background The potential applications of protein-engineered functional materials are so wide and exciting that the interest in these eco-friendly advanced materials will further expand in the future. Tag-mediated protein purification/immobilization technologies have emerged as green and cost-effective approaches for the fabrication of such materials. Strategies that combine the purification and immobilization of recombinant proteins/peptides onto/into natural, synthetic or hybrid materials in a single-step are arising and attracting increasing interest. Aim of Review This review highlights the most significant advances of the last 5 years within the scope of tag-mediated protein purification/immobilization and elucidates their contributions for the development of efficient single-step purification and immobilization strategies. Recent progresses in the field of protein-engineered materials created using innovative protein-tag combinations and future opportunities created by these new technologies are also summarized and identified herein. Key Scientific Concepts of Review Protein purification/immobilization tags present a remarkable ability to establish specific non-covalent/covalent interactions between solid materials and biological elements, which prompted the creation of tailor-made and advanced functional materials, and of next-generation hybrid materials. Affinity tags can bind to a wide range of materials (of synthetic, natural or hybrid nature), being most suitable for protein purification. Covalently binding tags are most suitable for long-term protein immobilization, but can only bind naturally to protein-based materials. Hybrid affinity-covalently binding tags have allowed efficient one-step purification and immobilization of proteins onto different materials, as well as the development of innovative protein-engineered materials. Self-aggregating tags have been particularly useful in combination with other tags for generating protein-engineered materials with self-assembling, flexible and/or responsive properties. While these tags have been mainly explored for independent protein purification, immobilization or functionalization purposes, efficient strategies that combine tag-mediated purification and immobilization/functionalization in a single-step will be essential to guarantee the sustainable manufacturing of advanced protein-engineered materials.
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Affiliation(s)
- Ana I. Freitas
- CEB - Centre of Biological Engineering, University of Minho, 4710-057 Braga, Portugal
| | - Lucília Domingues
- CEB - Centre of Biological Engineering, University of Minho, 4710-057 Braga, Portugal
| | - Tatiana Q. Aguiar
- CEB - Centre of Biological Engineering, University of Minho, 4710-057 Braga, Portugal
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12
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Wang Y, Wei Y, Xu Q, Shao S, Man H, Nie Y, Wang Z, Jiang Y. Fabrication of Yolk-Shell Fe 3O 4@NiSiO 3/Ni Microspheres for Efficient Purification of Histidine-Rich Proteins. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2021; 37:14167-14176. [PMID: 34839664 DOI: 10.1021/acs.langmuir.1c02433] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Magnetic materials perform well in the purification of histidine-rich proteins (His-proteins). In this work, a facile fabrication of yolk-shell magnetic Fe3O4@NiSiO3/Ni microspheres for the efficient purification of His-proteins has been reported. Yolk-shell Fe3O4@NiSiO3 microspheres were prepared via hydrothermal reaction. Then Ni nanoparticles (NPs) were loaded on Fe3O4@NiSiO3 microspheres after the adsorption and in situ reduction of nickel acetylacetonate. The yolk-shell Fe3O4@NiSiO3/Ni microspheres had a hierarchical flower-like structure and large cavities. The size of the cavity depended on the reaction time. This indicated that the microspheres had a large specific surface area for loading of more Ni NPs, which was crucial to the high His-protein adsorption capacity of Fe3O4@NiSiO3/Ni microspheres. Fe3O4@NiSiO3/Ni microspheres had a high adsorption capacity for bovine hemoglobin (BHb, 2822 mg/g), which was better than the values of other His-protein adsorbents. Fe3O4@NiSiO3/Ni microspheres still had a high BHb separation efficiency after seven separation cycles, indicating its good reusability and stability. Therefore, the as-prepared bifunctional yolk-shell Fe3O4@NiSiO3/Ni microspheres exhibited great practical application value for His-protein purification.
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Affiliation(s)
- Yang Wang
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Yingying Wei
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Qianrui Xu
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Shimin Shao
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Hong Man
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Yingrui Nie
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Zhifei Wang
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Yong Jiang
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
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13
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Ni-Chelated Poly(acrylic acid)-Grafted Magnetic Agarose Bead for Affinity-Based Separation of Proteins. Macromol Res 2021. [DOI: 10.1007/s13233-021-9096-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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14
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A novel nickel-modified nano-magnetite for isolation of histidine-tagged proteins expressed in Escherichia coli. Anal Bioanal Chem 2021; 413:6813-6821. [PMID: 34491395 DOI: 10.1007/s00216-021-03637-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Revised: 07/20/2021] [Accepted: 08/27/2021] [Indexed: 10/20/2022]
Abstract
Nano-magnetite with superparamagnetism could be coated by some organic compounds or by nano Au or Pt via surface modifications with multi-step reactions for the applications of isolating histidine-tagged (His-tagged) proteins. Introducing active sites of binding histidine onto the surface of nano-magnetite was the ultimate task. However, multi-step treatments might result in departure of the coatings from the surface of the nano-magnetite, which led to loss of active sites. In this work, we reported a convenient and efficient way of treating nano-magnetites and applied them in isolating His-tagged proteins. Carboxylates were introduced on the surface of home-made nano-magnetite directly via ultrasonic mixing with sodium bitartrate rather than complicated surface modifications, which was proved by thermogravimetric analyses. Ni2+ was, therefore, caught by the carboxylates of the coating via the coordinate interaction, demonstrated by X-ray photoelectron spectra. The coated magnetic nanoparticles with the bonded Ni2+ were successfully employed to selectively bind and separate recombinant His-tagged proteins directly from the mixture of Escherichia coli cell lysate, and showed wonderful affinity for His-tagged proteins with the saturated adsorption amount being 556 mg g-1. Additionally, such functionalized nano-magnetite manifested the excellent recyclability in isolating His-tagged proteins.
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15
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Eweida BY, El-Moghazy AY, Pandey PK, Amaly N. Fabrication and simulation studies of high-performance anionic sponge alginate beads for lysozyme separation. Colloids Surf A Physicochem Eng Asp 2021. [DOI: 10.1016/j.colsurfa.2021.126556] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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16
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Wang Y, Wei Y, Gao P, Sun S, Du Q, Wang Z, Jiang Y. Preparation of Fe 3O 4@PMAA@Ni Microspheres towards the Efficient and Selective Enrichment of Histidine-Rich Proteins. ACS APPLIED MATERIALS & INTERFACES 2021; 13:11166-11176. [PMID: 33635047 DOI: 10.1021/acsami.0c19734] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Magnetic material is considered to as a major concern material for the enrichment of histidine-rich proteins (His-proteins) via metal-ion affinity. In this work, magnetic polymer microspheres with core-shell structure (Fe3O4@PMAA@Ni) were successfully prepared via reflux-precipitation polymerization followed by in situ reduction and growth of Ni2+. The obtained Ni nanofoams with flower-like structure and uniform pore size (3.34 nm) provided numerous binding sites for His-proteins. The adsorption performance of Fe3O4@PMAA@Ni microspheres for His-proteins was estimated via selectively separating bovine hemoglobin (BHb) and bovine serum albumin (BSA) from a matrix composed of BHb, BSA, and lysozyme (LYZ). The results indicated that Fe3O4@PMAA@Ni microspheres could efficiently and selectively separate His-proteins from the matrix, with a maximum adsorption capacity of ∼2660 mg/g for BHb. Moreover, Fe3O4@PMAA@Ni microspheres exhibited good stability and recyclability for BHb separation over seven cycles. Therefore, this work reported a novel and facile strategy to prepare core-shell Fe3O4@PMAA@Ni microspheres, which was promising for practical applications of His-protein separation and purification in proteomics.
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Affiliation(s)
- Yang Wang
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Yingying Wei
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Pengcheng Gao
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Si Sun
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Qian Du
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Zhifei Wang
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
| | - Yong Jiang
- School of Chemistry and Chemical Engineering, Jiangsu Province Hi-Tech Key Laboratory for Biomedical Research, Southeast University, Nanjing 211189, P. R. China
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17
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Kip C, Hamaloğlu KÖ, Demir C, Tuncel A. Recent trends in sorbents for bioaffinity chromatography. J Sep Sci 2021; 44:1273-1291. [PMID: 33370505 DOI: 10.1002/jssc.202001117] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 12/22/2020] [Accepted: 12/23/2020] [Indexed: 12/24/2022]
Abstract
Isolation or enrichment of biological molecules from complex biological samples is mostly a prerequisite in proteomics, genomics, and glycomics. Different techniques have been used to advance the efficiency of the purification of biological molecules. Bioaffinity chromatography is one of the most powerful technique that plays an important role in the isolation of target biological molecules by the specific interactions with ligands that are immobilized on different support materials. This review examines the recent developments in bioaffinity chromatography particularly over the past 5 years in the literature. Also properties of supports, immobilization techniques, types of binding agents, and methods used in bioaffinity chromatography applications are summarized.
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Affiliation(s)
- Cigdem Kip
- Chemical Engineering Department, Hacettepe University, Ankara, Turkey
| | | | - Cihan Demir
- Chemical Engineering Department, Hacettepe University, Ankara, Turkey.,Nanotechnology and Nanomedicine Division, Hacettepe University, Ankara, Turkey
| | - Ali Tuncel
- Chemical Engineering Department, Hacettepe University, Ankara, Turkey
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18
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Yang L, Gao T, Li W, Luo Y, Ullah S, Fang X, Cao Y, Pei R. Ni-Nitrilotriacetic Acid Affinity SELEX Method for Selection of DNA Aptamers Specific to the N-Cadherin Protein. ACS COMBINATORIAL SCIENCE 2020; 22:867-872. [PMID: 33146506 DOI: 10.1021/acscombsci.0c00165] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Nucleic acid aptamers are single-stranded oligonucleotides that may be evolved for affinity and specificity for their targets and can be easily produced, regenerated, and stabilized. In this study, we adapted Ni-NTA (nickle-charged nitrilotriacetic acid) affinity-chromatography in the development of single-stranded DNA aptamers against N-cadherin protein by systematic evolution of ligands by exponential enrichment (SELEX). After ten rounds of selection, two aptamers, designated NS13 and NC23, were selected, which showed low dissociation constants of 93 and 174 nM, respectively. The 5'-carboxyfluorescein-labeled NS13 was used for the sensitive detection of N-cadherin protein by the enzyme-linked oligonucleotide assay (ELONA) method.
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Affiliation(s)
- Luyan Yang
- CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou 215123, China
| | - Tian Gao
- CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou 215123, China
| | - Wenjing Li
- CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou 215123, China
| | - Yu Luo
- CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou 215123, China
| | - Salim Ullah
- CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou 215123, China
| | - Xiaona Fang
- CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou 215123, China
| | - Yanwei Cao
- CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou 215123, China
| | - Renjun Pei
- CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou 215123, China
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19
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Mahmoudi Gomari M, Saraygord-Afshari N, Farsimadan M, Rostami N, Aghamiri S, Farajollahi MM. Opportunities and challenges of the tag-assisted protein purification techniques: Applications in the pharmaceutical industry. Biotechnol Adv 2020; 45:107653. [PMID: 33157154 DOI: 10.1016/j.biotechadv.2020.107653] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2020] [Revised: 10/22/2020] [Accepted: 10/29/2020] [Indexed: 01/16/2023]
Abstract
Tag-assisted protein purification is a method of choice for both academic researches and large-scale industrial demands. Application of the purification tags in the protein production process can help to save time and cost, but the design and application of tagged fusion proteins are challenging. An appropriate tagging strategy must provide sufficient expression yield and high purity for the final protein products while preserving their native structure and function. Thanks to the recent advances in the bioinformatics and emergence of high-throughput techniques (e.g. SEREX), many new tags are introduced to the market. A variety of interfering and non-interfering tags have currently broadened their application scope beyond the traditional use as a simple purification tool. They can take part in many biochemical and analytical features and act as solubility and protein expression enhancers, probe tracker for online visualization, detectors of post-translational modifications, and carrier-driven tags. Given the variability and growing number of the purification tags, here we reviewed the protein- and peptide-structured purification tags used in the affinity, ion-exchange, reverse phase, and immobilized metal ion affinity chromatographies. We highlighted the demand for purification tags in the pharmaceutical industry and discussed the impact of self-cleavable tags, aggregating tags, and nanotechnology on both the column-based and column-free purification techniques.
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Affiliation(s)
- Mohammad Mahmoudi Gomari
- Department of Medical Biotechnology, Faculty of Allied Medical Sciences, Iran University of Medical Sciences, Tehran, Iran
| | - Neda Saraygord-Afshari
- Department of Medical Biotechnology, Faculty of Allied Medical Sciences, Iran University of Medical Sciences, Tehran, Iran.
| | - Marziye Farsimadan
- Department of Biology, Faculty of Sciences, University of Guilan, Rasht, Iran
| | - Neda Rostami
- Department of Chemical Engineering, Faculty of Engineering, Arak University, Iran
| | - Shahin Aghamiri
- Student research committee, Department of medical biotechnology, School of Advanced Technologies in Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Mohammad M Farajollahi
- Department of Medical Biotechnology, Faculty of Allied Medical Sciences, Iran University of Medical Sciences, Tehran, Iran
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20
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Amaly N, Ma Y, El-Moghazy AY, Sun G. Copper complex formed with pyridine rings grafted on cellulose nanofibrous membranes for highly efficient lysozyme adsorption. Sep Purif Technol 2020. [DOI: 10.1016/j.seppur.2020.117086] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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21
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Han X, Cao M, Zhou B, Yu C, Liu Y, Peng B, Meng L, Wei JF, Li L, Huang W. Specifically immobilizing His-tagged allergens to magnetic nanoparticles for fast and quantitative detection of allergen-specific IgE in serum samples. Talanta 2020; 219:121301. [DOI: 10.1016/j.talanta.2020.121301] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2020] [Revised: 06/10/2020] [Accepted: 06/13/2020] [Indexed: 12/18/2022]
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22
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Guan H, Wang J, Tan S, Han Q, Liang Q, Ding M. A facile method to synthesize magnetic nanoparticles chelated with Copper(II) for selective adsorption of bovine hemoglobin. KOREAN J CHEM ENG 2020. [DOI: 10.1007/s11814-020-0532-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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23
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Kip Ç. A Magnetic Plasmonic Catalyst Based on Monodisperse-Porous Silica Microspheres for Rapid Reduction of 4-Nitrophenol. J Inorg Organomet Polym Mater 2020. [DOI: 10.1007/s10904-019-01337-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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24
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Yang Q, Dong Y, Qiu Y, Yang X, Cao H, Wu Y. Design of Functional Magnetic Nanocomposites for Bioseparation. Colloids Surf B Biointerfaces 2020; 191:111014. [PMID: 32325362 DOI: 10.1016/j.colsurfb.2020.111014] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2020] [Accepted: 04/03/2020] [Indexed: 12/31/2022]
Abstract
Magnetic materials have been widely used in bioseparation in recent years due to their good biocompatibility, magnetic properties, and high binding capacity. In this review, we provide a brief introduction on the preparation and bioseparation applications of magnetic materials including the synthesis and surface modification of magnetic nanoparticles as well as the preparation and applications of magnetic nanocomposites in the separation of proteins, peptides, cells, exosomes and blood. The current limitations and remaining challenges in the fabrication process of magnetic materials for bioseparation will be also detailed.
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Affiliation(s)
- Qi Yang
- National Engineering Research Center for Biomaterials, Sichuan University, Chengdu, Sichuan 610064, PR China; Dehong Biomedical Engineering Research Center, Dehong Teachers' College, Dehong, Yunnan 678400, PR China
| | - Yi Dong
- Dehong Biomedical Engineering Research Center, Dehong Teachers' College, Dehong, Yunnan 678400, PR China
| | - Yong Qiu
- Dehong Biomedical Engineering Research Center, Dehong Teachers' College, Dehong, Yunnan 678400, PR China
| | - Xinzhou Yang
- Dehong Biomedical Engineering Research Center, Dehong Teachers' College, Dehong, Yunnan 678400, PR China
| | - Han Cao
- Dehong Biomedical Engineering Research Center, Dehong Teachers' College, Dehong, Yunnan 678400, PR China
| | - Yao Wu
- National Engineering Research Center for Biomaterials, Sichuan University, Chengdu, Sichuan 610064, PR China.
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25
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Yıldırım D, Kip Ç, Tsogtbaatar K, Koçer İ, Çelik E, Tuncel A. Microfluidic immobilized metal affinity chromatography based on Ti(IV)-decorated silica microspheres for purification of phosphoproteins. J Chromatogr B Analyt Technol Biomed Life Sci 2020; 1140:122010. [DOI: 10.1016/j.jchromb.2020.122010] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2019] [Revised: 12/20/2019] [Accepted: 01/30/2020] [Indexed: 02/09/2023]
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26
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Wang W, Zhou F, Cheng X, Su Z, Guo H. High-efficiency Ni 2+-NTA/PAA magnetic beads with specific separation on His-tagged protein. IET Nanobiotechnol 2020; 14:67-72. [PMID: 31935680 PMCID: PMC8676476 DOI: 10.1049/iet-nbt.2019.0271] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2019] [Revised: 09/24/2019] [Accepted: 09/27/2019] [Indexed: 09/01/2023] Open
Abstract
To effective capture and universal enrichment of His-tagged protein, polyacrylic acid (PAA) brushes were used to encapsulate Fe3O4 nanoparticles, connect NTA, and Ni2+ to prepare magnetic beads. These materials provide many advantages, such as excellent stability, tuneable particle size, and a surface for further functionalisation with biomolecules. His-tagged green fluorescence protein (GFP) was separated efficiently, and the binding capacity of Fe3O4/MPS@PAA/NTA-Ni2+ was 93.4 mg/g. Compared with High-Affinity Ni-NTA Resin and Ni-NTA Magnetic Agarose Beads, Fe3O4/MPS@PAA/NTA-Ni2+ nanocomposites exhibited higher separation efficiency and binding capacity towards His-tagged GFP. Moreover, the selectivity and recyclability of them for the target proteins were maintained well after six cycles. This study would widen the application of PAA in constructing multifunctional nanocomposites for biomedical fields.
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Affiliation(s)
- Wenjing Wang
- Hubei Key Laboratory of Industrial Microbiology, Hubei University of Technology, Wuhan 430068, People's Republic of China
| | - Fengzhen Zhou
- Hubei Key Laboratory of Industrial Microbiology, Hubei University of Technology, Wuhan 430068, People's Republic of China
| | - Xiyao Cheng
- Hubei Key Laboratory of Industrial Microbiology, Hubei University of Technology, Wuhan 430068, People's Republic of China
| | - Zhengding Su
- Hubei Key Laboratory of Industrial Microbiology, Hubei University of Technology, Wuhan 430068, People's Republic of China
| | - Huiling Guo
- Hubei Key Laboratory of Industrial Microbiology, Hubei University of Technology, Wuhan 430068, People's Republic of China.
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27
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Silica microspheres functionalized with the iminodiacetic acid/copper(II) complex as a peroxidase mimic for use in metal affinity chromatography-based colorimetric determination of histidine-tagged proteins. Mikrochim Acta 2020; 187:121. [DOI: 10.1007/s00604-019-4087-0] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2019] [Accepted: 12/16/2019] [Indexed: 01/11/2023]
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28
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Manko N, Starykovych M, Bobak Y, Stoika R, Richter V, Koval O, Lavrik I, Horák D, Souchelnytskyi S, Kit Y. The purification and identification of human blood serum proteins with affinity to the antitumor active RL2 lactaptin using magnetic microparticles. Biomed Chromatogr 2019; 33:e4647. [PMID: 31299101 DOI: 10.1002/bmc.4647] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2019] [Revised: 07/01/2019] [Accepted: 07/08/2019] [Indexed: 11/11/2022]
Abstract
The cytopoxic effect of RL2 lactaptin (the recombinant analog of proteolytic fragment of human kappa-casein) toward tumor cells in vitro and in vivo presents it as a novel promising antitumor drug. The binding of any drug with serum proteins can affect their activity, distribution, rate of excretion and toxicity in the human body. Here, we studied the ability of RL2 to bind to various blood serum proteins. Using magnetic microparticles bearing by RL2 as an affinity matrix, in combination with mass spectrometry and western blot analysis, we found a number of blood serum proteins possessing affinity for RL2. Among them IgA, IgM and IgG subclasses of immunoglobulins, apolipoprotein A1 and various cortactin isoforms were identified. This data suggests that in the bloodstream RL2 lactaptin takes part in complicate protein-protein interactions, which can affect its activity.
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Affiliation(s)
- Nazar Manko
- Institute of Cell Biology NAS Ukraine, Lviv, Ukraine
| | | | | | | | - Vladimir Richter
- Department of Biotechnology, Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
| | - Olga Koval
- Department of Biotechnology, Institute of Chemical Biology and Fundamental Medicine, SB RAS, Novosibirsk, Russia
| | - Inna Lavrik
- Department of Translational Inflammation Research, Medical Faculty, Otto von Guericke University, Magdeburg, Germany
| | - Daniel Horák
- Institute of Macromolecular Chemistry, AS CR, Prague, Czech Republic
| | | | - Yuriy Kit
- Institute of Cell Biology NAS Ukraine, Lviv, Ukraine
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29
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Luo P, Han J, Li Y, Wang Y, Wang L, Ni L. Preparation of dendritic polymer-based magnetic carrier for application of bromelain separation and purification. J Food Biochem 2019; 43:e12976. [PMID: 31489668 DOI: 10.1111/jfbc.12976] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Revised: 05/17/2019] [Accepted: 06/15/2019] [Indexed: 11/27/2022]
Abstract
Bromelain has wide applications in different industries, such as food, textile, and medicine. Traditional approaches for bromelain separation and purification from solution still have many problems, including unsatisfactory binding efficiency, time-consuming operation, and costly equipment. In the present study, a new type of dendritic polymer-based magnetic carrier (GO@Fe3 O4 @PEI-Cu2+ ) was first prepared for bromelain separation and purification in solution. The histidine existing in bromelain could bind to Cu2+ cations adsorbed on the surface of the magnetic carrier, and the magnetic carrier showed excellent performance for bromelain separation and purification in solution, with the adsorption capacity up to 357 mg/g. The magnetic carrier also exhibited excellent property in the aspect of recyclability. It was found that the magnetic carrier also presented desirable performance for the separation and purification of bromelain from the crude extract of pineapple peel, and the bromelain structure remained intact before and after elution process. PRACTICAL APPLICATIONS: Considering many advantages of bromelain in the applications of pharmaceutical and food industries, this study is aimed at presenting a novel magnetic carrier with high stability and fabulous performance for bromelain separation and purification in solution and achieving the practical application that the magnetic carrier can efficiently separate bromelain from the crude extract of pineapple peel.
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Affiliation(s)
- Peng Luo
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang, PR China
| | - Juan Han
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang, PR China
| | - Yuan Li
- Development Strategy Research Office of Policy Research Center, Council of Management Pingdingshan National Hi-tech Industrial Development Zone, Pingdingshan, PR China
| | - Yun Wang
- School of Chemistry and Chemical Engineering, Jiangsu University, Zhenjiang, PR China
| | - Li Wang
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang, PR China
| | - Liang Ni
- School of Chemistry and Chemical Engineering, Jiangsu University, Zhenjiang, PR China
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30
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Goršak T, Makovec D, Javornik U, Belec B, Kralj S, Lisjak D. A functionalization strategy for the dispersion of permanently magnetic barium-hexaferrite nanoplatelets in complex biological media. Colloids Surf A Physicochem Eng Asp 2019. [DOI: 10.1016/j.colsurfa.2019.04.051] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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31
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Zhou DD, Zhang Q, Zhang H, Wang YZ, Yang FQ, Wang SP, Wang YT. Cupric ion functionalized polydopamine coated magnetic microspheres as solid-phase adsorbent for the extraction of purines in plasma. J Chromatogr B Analyt Technol Biomed Life Sci 2019; 1120:95-103. [DOI: 10.1016/j.jchromb.2019.04.054] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2019] [Revised: 04/29/2019] [Accepted: 04/30/2019] [Indexed: 01/08/2023]
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32
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Han J, Wang L, Wang L, Li C, Mao Y, Wang Y. Fabrication of a core-shell-shell magnetic polymeric microsphere with excellent performance for separation and purification of bromelain. Food Chem 2019; 283:1-10. [DOI: 10.1016/j.foodchem.2019.01.016] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2018] [Revised: 11/22/2018] [Accepted: 01/03/2019] [Indexed: 11/24/2022]
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33
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Zhang N, Chen B, Li R, Li C, Fan A, Huang F. A multifunctional chromatographic material modified with aminopolycarboxylic acid agent. Sep Purif Technol 2019. [DOI: 10.1016/j.seppur.2018.03.061] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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34
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Süngü Ç, Kip Ç, Tuncel A. Molecularly imprinted polymeric shell coated monodisperse-porous silica microspheres as a stationary phase for microfluidic boronate affinity chromatography. J Sep Sci 2019; 42:1962-1971. [PMID: 30900808 DOI: 10.1002/jssc.201801258] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2018] [Revised: 03/17/2019] [Accepted: 03/19/2019] [Indexed: 12/11/2022]
Abstract
Molecular imprinting of cis-diol functionalized agents via boronate affinity interaction has been usually performed using nanoparticles as a support which cannot be utilized as a stationary phase in continuous microcolumn applications. In this study, monodisperse-porous, spherical silica particles in the micron-size range, with bimodal pore diameter distribution were selected as a new support for the synthesis of a molecularly imprinted boronate affinity sorbent, using a cis-diol functionalized agent as the template. A specific surface area of 158 m2 /g was achieved with the imprinted sorbent by using monodisperse-porous silica microspheres containing both mesoporous and macroporous compartments as the support. High porosity originating from the macroporous compartment and sufficiently high particle size provided good column permeability to the imprinted sorbent in microcolumn applications. The mesoporous compartment provided a large surface area for the parking of imprinted molecules while the macroporous compartment facilitated the intraparticular diffusion of imprinted target within the microsphere interior. A microfluidic boronate affinity system was first constructed by using molecularly imprinted polymeric shell coated monodisperse-porous silica microspheres as a stationary phase. The synthetic route for the imprinting process, the reversible adsorption/ desorption behavior of selected target and the selectivity of imprinted sorbent in both batch and microfluidic boronate affinity chromatography systems are reported.
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Affiliation(s)
| | - Çiğdem Kip
- Department of Chemical Engineering, Hacettepe University, Ankara, Turkey
| | - Ali Tuncel
- Department of Chemical Engineering, Hacettepe University, Ankara, Turkey
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35
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Kip Ç, Tosun RB, Alpaslan S, Koçer İ, Çelik E, Tuncel A. Ni(II)-decorated porous titania microspheres as a stationary phase for column chromatography applications: Highly selective purification of hemoglobin from human blood. Talanta 2019; 200:100-106. [PMID: 31036162 DOI: 10.1016/j.talanta.2019.03.045] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2018] [Revised: 03/09/2019] [Accepted: 03/11/2019] [Indexed: 12/22/2022]
Abstract
Titania (TiO2)-based monodisperse-porous stationary phase/sorbent was synthesized by decoration of Ni(II) ions onto TiO2 microspheres 4.2 µm in size, obtained by a staged-shape template hydrolysis and condensation protocol. Ni(II) ions were attached onto iminodiacetic acid-3-glycidoxypropyltrimethoxysilane (IDA-GPTMS) bound-titania microspheres by metal-chelate complex formation. The appropriate mean size, sufficiently high surface area and high porosity providing an appropriate column permeability make Ni(II)-decorated TiO2 microspheres a good sorbent/stationary phase for batch/continuous-column chromatography applications. Ni(II)-decorated TiO2 microspheres were investigated as a sorbent for purification of a typical histidine-rich protein, hemoglobin (Hb) via immobilized metal affinity chromatography (IMAC) in batch fashion, by including bovine serum albumin (BSA) as reference. The saturation capacities of batch adsorption runs performed with bovine Hb and BSA were determined as 137 ± 9 and 45 ± 3 mg/g, respectively. Human Hb with the purity of > 95% was recovered from whole blood by IMAC conducted in batch-fashion. Ni(II)-decorated microspheres were also evaluated as a stationary phase in a microfluidic-IMAC system, in which, human Hb was recovered from whole blood with a purity of 85%. The microfluidic-IMAC system constructed here, based on monodisperse-porous TiO2 microspheres, is a promising tool for genomics/proteomics applications involving isolation of valuable biomolecules from low-volume samples.
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Affiliation(s)
- Çiğdem Kip
- Hacettepe University, Chemical Engineering Department, Ankara 06800, Turkey
| | - Rukiye Babacan Tosun
- Hacettepe University, Institute of Science, Division of Nanotechnology and Nanomedicine, 06800 Ankara, Turkey
| | - Sezgi Alpaslan
- Hacettepe University, Chemical Engineering Department, Ankara 06800, Turkey
| | - İlkay Koçer
- Hacettepe University, Chemical Engineering Department, Ankara 06800, Turkey
| | - Eda Çelik
- Hacettepe University, Chemical Engineering Department, Ankara 06800, Turkey; Hacettepe University, Institute of Science, Division of Bioengineering, 06800 Ankara, Turkey
| | - Ali Tuncel
- Hacettepe University, Chemical Engineering Department, Ankara 06800, Turkey.
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Jose L, Lee C, Hwang A, Park JH, Song JK, Paik HJ. Magnetically steerable Fe3O4@Ni2+-NTA-polystyrene nanoparticles for the immobilization and separation of his6-protein. Eur Polym J 2019. [DOI: 10.1016/j.eurpolymj.2019.01.024] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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37
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Hernandez-Leon SG, Sarabia-Sainz JA, Ramos-Clamont Montfort G, Huerta-Ocampo JÁ, Guzman-Partida AM, Robles-Burgueño MDR, Burgara-Estrella AJ, Vazquez-Moreno L. Bifunctional nickel–iminodiacetic acid-core–shell silica nanoparticles for the exclusion of high molecular weight proteins and purification of His-tagged recombinant proteins. RSC Adv 2019; 9:11038-11045. [PMID: 35520222 PMCID: PMC9063014 DOI: 10.1039/c9ra01144g] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2019] [Accepted: 04/01/2019] [Indexed: 01/19/2023] Open
Abstract
Silica nanoparticles were synthesized and chemically modified with iminodiacetic acid (IDA) and Ni2+ ions surrounded by a bis-acrylamide polymeric shell to obtain a new core–shell immobilized metal affinity chromatography (IMAC) based material.
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Affiliation(s)
- Sergio G. Hernandez-Leon
- Centro de Investigación en Alimentación y Desarrollo A.C. Carretera Gustavo Enrique Astiazarán Rosas
- Hermosillo
- Mexico
| | | | | | - José Ángel Huerta-Ocampo
- CONACYT-Centro de Investigación en Alimentación y Desarrollo A.C. Carretera Gustavo Enrique Astiazarán Rosas
- Hermosillo
- Mexico
| | - Ana M. Guzman-Partida
- Centro de Investigación en Alimentación y Desarrollo A.C. Carretera Gustavo Enrique Astiazarán Rosas
- Hermosillo
- Mexico
| | | | | | - Luz Vazquez-Moreno
- Centro de Investigación en Alimentación y Desarrollo A.C. Carretera Gustavo Enrique Astiazarán Rosas
- Hermosillo
- Mexico
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38
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Liu H, Zhou H, Du H, Xiao Q, Pistolozzi M. Kinetically-controlled mechanism-based isolation of metabolic serine hydrolases in active form from complex proteomes: butyrylcholinesterase as a case study. RSC Adv 2019; 9:38505-38519. [PMID: 35540231 PMCID: PMC9075836 DOI: 10.1039/c9ra07583f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Accepted: 11/18/2019] [Indexed: 12/02/2022] Open
Abstract
In this work an activity-based probe containing a carbamate group was designed to isolate human butyrylcholinesterase (hBChE), a metabolic serine hydrolase (mSH), from complex proteomes. The method took advantage of the native interaction mechanism of mSHs with carbamate pseudo-substrates for temporarily capturing the enzyme on a resin functionalized with the carbamate probe and releasing the enzyme in active form after removal of the contaminating proteins. The isolation relied on the possibility of manipulating the carbamylation and decarbamylation kinetics favoring the former during the capture and wash steps and the latter in the release step. The designed probe captured and released all the active hBChE isoenzymes present in plasma with high selectivity (up to ∼2000-fold purification) and reasonable yields (17% to 36%). The parameters affecting the performance were the incubation time used in the load and elution steps, the plasma to resin volumetric ratio, the elution temperature and the nature and concentration of the eluting agent. The carbamate resin could be prepared either by coupling a fully synthesized probe with an activated resin or by building the probe onto the resin by a step-by-step procedure, without major differences in performance between the two routes. The prepared resins allowed to process up to about 8.5 mL of plasma per g of resin with constant performance. Since the method was based on the general catalytic cycle of mSHs, we expect this approach to be applicable to other enzymes of the family, by selecting a suitable target-selective feature to link to the carbamate group. The modulation of the equilibrium between carbamylation and decarbamylation kinetics is used to isolate a model metabolic serine hydrolase.![]()
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Affiliation(s)
- Hui Liu
- School of Biology & Biological Engineering
- South China University of Technology
- Higher Education Mega Center
- Guangzhou
- People's Republic of China
| | - Huimin Zhou
- School of Biology & Biological Engineering
- South China University of Technology
- Higher Education Mega Center
- Guangzhou
- People's Republic of China
| | - Huaqiao Du
- School of Biology & Biological Engineering
- South China University of Technology
- Higher Education Mega Center
- Guangzhou
- People's Republic of China
| | - Qiaoling Xiao
- School of Biology & Biological Engineering
- South China University of Technology
- Higher Education Mega Center
- Guangzhou
- People's Republic of China
| | - Marco Pistolozzi
- School of Biology & Biological Engineering
- South China University of Technology
- Higher Education Mega Center
- Guangzhou
- People's Republic of China
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39
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Babacan Tosun R, Kip Ç, Tuncel A. Polymeric template assisted synthesis of monodisperse-porous manganese oxide microspheres: a new nanozyme with oxidase-like activity allowing biomolecule determination via bimodal sensing. NEW J CHEM 2019. [DOI: 10.1039/c9nj03527c] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
New template assisted synthesis of monodisperse-porous MnO2 microspheres and their usage as a nanozyme in the first bimodal sensing of ascorbic acid.
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Affiliation(s)
| | - Çiğdem Kip
- Hacettepe University
- Chemical Engineering Department
- Ankara
- Turkey
| | - Ali Tuncel
- Hacettepe University
- Chemical Engineering Department
- Ankara
- Turkey
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40
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Liu J, Wang X, Zhang W. Atomic Force Microscopy Imaging Study of Aligning DNA by Dumbbell-like Au-Fe 3O 4 Magnetic Nanoparticles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2018; 34:14875-14881. [PMID: 30011364 DOI: 10.1021/acs.langmuir.8b01784] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Studies on nucleic acid structure and interactions between nucleic acid and its binding molecules are of great importance for understanding and controlling many important biological processes. Atomic force microscopy (AFM) imaging is one of the most efficient methods to disclose the DNA structure and binding modes between DNA and DNA-binding molecules. Long-chain DNA tends to form a random coiled structure, which prevents direct AFM imaging observation of the subtle structure formed by DNA itself or protein binding. Aligning DNA from the random coiled state into the extended state is not only important for applications in DNA nanotechnology but also for elucidating the interaction mechanism between DNA and other molecules. Here, we developed an efficient method based on the magnetic field to align long-chain DNA on a silicon surface. We used AFM imaging to study the alignment of DNA at the single-molecule level, showing that DNA can be stretched and highly aligned by the manipulation of magnetic nanoparticles tethered to one end of DNA and that the aligned DNA can be imaged clearly by AFM. In the absence of the magnetic field, the aligned DNA can relax back to a random coiled state upon rinsing. Such alignment and relaxation can be repeated many times, which provides an efficient method for the manipulation of individual DNA molecules and the investigation of DNA and DNA-binding molecule interactions.
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Affiliation(s)
- Jianyu Liu
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry , Jilin University , Changchun 130012 , People's Republic of China
| | - Xinxin Wang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry , Jilin University , Changchun 130012 , People's Republic of China
| | - Wenke Zhang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry , Jilin University , Changchun 130012 , People's Republic of China
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41
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Salimi K, Usta DD, Koçer İ, Çelik E, Tuncel A. Protein A and protein A/G coupled magnetic SiO2 microspheres for affinity purification of immunoglobulin G. Int J Biol Macromol 2018; 111:178-185. [DOI: 10.1016/j.ijbiomac.2018.01.019] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2017] [Revised: 12/30/2017] [Accepted: 01/04/2018] [Indexed: 10/18/2022]
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42
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Zasońska BA, Hlídková H, Petrovský E, Myronovskij S, Nehrych T, Negrych N, Shorobura M, Antonyuk V, Stoika R, Kit Y, Horák D. Monodisperse magnetic poly(glycidyl methacrylate) microspheres for isolation of autoantibodies with affinity for the 46 kDa form of unconventional Myo1C present in autoimmune patients. Mikrochim Acta 2018; 185:262. [PMID: 29687337 DOI: 10.1007/s00604-018-2807-5] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2018] [Accepted: 04/13/2018] [Indexed: 01/07/2023]
Abstract
Monodisperse nonmagnetic macroporous poly(glycidyl methacrylate) (PGMA) microspheres were synthesized by multistep swelling polymerization of glycidyl methacrylate, ethylene dimethacrylate and 2-[(methoxycarbonyl)methoxy]ethyl methacrylate (MCMEMA). This was followed (a) by ammonolysis to modify the microspheres with amino groups, and (b) by incorporation of iron oxide (γ-Fe2O3) into the pores to render the particles magnetic. The resulting porous and magnetic microspheres were characterized by scanning and transmission electron microscopy (SEM and TEM), atomic absorption and Fourier transform infrared spectroscopy (AAS and FTIR), elemental analysis, vibrating magnetometry, mercury porosimetry and Brunauer-Emmett-Teller adsorption/desorption isotherms. The microspheres are meso- and macroporous, typically 5 μm in diameter, contain 0.9 mM · g-1 of amino groups and 14 wt.% of iron according to elemental analysis and AAS, respectively. The particles were conjugated to p46/Myo1C protein, a potential biomarker of autoimmune diseases, to isolate specific autoantibodies in the blood of patients suffering from multiple sclerosis (MS). The p46/Myo1C loaded microspheres are shown to enable the preconcentration of minute quantities of specific immunoglobulins prior to their quantification via SDS-PAGE. The immunoglobulin M (IgM) with affinity to Myo1C was detected in MS patients. Graphical abstract Monodisperse magnetic poly(glycidyl methacrylate) microspheres were synthesized, conjugated with 46 kDa form of unconventional Myo1C protein (p46/Myo1C) via carbodiimide (DIC) chemistry, and specific autoantibodies isolated from blood of multiple sclerosis (MS) patients; immunoglobulin M (IgM) level increased in MS patients.
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Affiliation(s)
- Beata A Zasońska
- Department of Polymer Particles, Institute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Heyrovského nám. 2, 162 06, Prague 6, Czech Republic
| | - Helena Hlídková
- Department of Polymer Particles, Institute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Heyrovského nám. 2, 162 06, Prague 6, Czech Republic
| | - Eduard Petrovský
- Geomagnetic Department, Institute of Geophysics, Academy of Sciences of the Czech Republic, Boční II/1401, 141 31, Prague 4, Czech Republic
| | - Severyn Myronovskij
- Department of Regulation of Cell Proliferation and Apoptosis, Institute of Cell Biology, NAS of Ukraine, Drahomanov Str. 14/16, Lviv, 79005, Ukraine
| | - Tetyana Nehrych
- Department of Neurology, Danylo Halytsky Lviv National Medical University, Pekarska Str. 69, Lviv, 79010, Ukraine
| | - Nazar Negrych
- Department of Neurology, Danylo Halytsky Lviv National Medical University, Pekarska Str. 69, Lviv, 79010, Ukraine
| | - Mariya Shorobura
- Department of Neurology, Danylo Halytsky Lviv National Medical University, Pekarska Str. 69, Lviv, 79010, Ukraine
| | - Volodymyr Antonyuk
- Department of Regulation of Cell Proliferation and Apoptosis, Institute of Cell Biology, NAS of Ukraine, Drahomanov Str. 14/16, Lviv, 79005, Ukraine
| | - Rostyslav Stoika
- Department of Regulation of Cell Proliferation and Apoptosis, Institute of Cell Biology, NAS of Ukraine, Drahomanov Str. 14/16, Lviv, 79005, Ukraine
| | - Yuriy Kit
- Department of Regulation of Cell Proliferation and Apoptosis, Institute of Cell Biology, NAS of Ukraine, Drahomanov Str. 14/16, Lviv, 79005, Ukraine
| | - Daniel Horák
- Department of Polymer Particles, Institute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Heyrovského nám. 2, 162 06, Prague 6, Czech Republic.
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43
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Shao M, Xiu L, Zhang H, Huang J, Gong X. Chitosan/cellulose-based beads for the affinity purification of histidine-tagged proteins. Prep Biochem Biotechnol 2018; 48:352-360. [DOI: 10.1080/10826068.2018.1446154] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- Mingcong Shao
- College of Food Science and Biotechnology, Zhejiang Gongshang University, Hangzhou, P. R. China
| | - Lili Xiu
- College of Food Science and Biotechnology, Zhejiang Gongshang University, Hangzhou, P. R. China
| | - Haijiang Zhang
- Jiangsu Key Laboratory of Regional Resource Exploitation and Medicinal Research, Huaiyin Institute of Technology, Huaian, P. R. China
| | - Jianying Huang
- College of Food Science and Biotechnology, Zhejiang Gongshang University, Hangzhou, P. R. China
| | - Xingwen Gong
- College of Food Science and Biotechnology, Zhejiang Gongshang University, Hangzhou, P. R. China
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44
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Gan H, Xu H. A novel aptamer-based online magnetic solid phase extraction method for the selective determination of 8-hydroxy-2'-deoxyguanosine in human urine. Anal Chim Acta 2018; 1008:48-56. [PMID: 29420943 DOI: 10.1016/j.aca.2017.12.032] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2017] [Revised: 12/07/2017] [Accepted: 12/16/2017] [Indexed: 12/15/2022]
Abstract
In this work, an innovative magnetic aptamer adsorbent (Fe3O4-aptamer MNPs) was synthesized for the selective extraction of 8-hydroxy-2'-deoxyguanosine (8-OHdG). Amino-functionalized-Fe3O4 was crosslinked with 8-OHdG aptamer by glutaraldehyde and fixed into a steel stainless tube as the sorbent of magnetic solid phase extraction (MSPE). After selective extraction by the aptamer adsorbent, the adsorbed 8-OHdG was desorbed dynamically and online analyzed by high performance liquid chromatography-mass spectrometry (HPLC-MS). The synthesized sorbent presented outstanding features, including specific selectivity, high enrichment capacity, stability and biocompatibility. Moreover, this proposed MSPE-HPLC-MS can achieve adsorption and desorption operation integration, greatly simplify the analysis process and reduce human errors. When compared with offline MSPE, a sensitivity enhancement of 800 times was obtained for the online method. Some experimental parameters such as the amount of the sorbent, sample flow rate and sample volume, were optimized systematically. Under the optimal conditions, low limit of detection (0.01 ng mL-1, S/N = 3), limit of quantity (0.03 ng mL-1, S/N = 10) and wide linear range with a satisfactory correlation coefficient (R2 ≥ 0.9992) were obtained. And the recoveries of 8-OHdG in the urine samples varied from 82% to 116%. All these results revealed that the method is simple, rapid, selective, sensitive and automated, and it could be expected to become a potential approach for the selective determination of trace 8-OHdG in complex urinary samples.
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Affiliation(s)
- Haijiao Gan
- Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan, China
| | - Hui Xu
- Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan, China.
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45
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Chen B, Zhang N, Li C, Li R, Fan A. Synthesis and chromatographic characteristics of iminodisuccinic acid-functionalized silica stationary phase. J Chromatogr A 2017; 1530:120-128. [DOI: 10.1016/j.chroma.2017.11.032] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2017] [Revised: 09/29/2017] [Accepted: 11/14/2017] [Indexed: 12/11/2022]
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46
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Guo PF, Zhang DD, Guo ZY, Chen ML, Wang JH. Copper-Decorated Titanate Nanosheets: Novel Homogeneous Monolayers with a Superior Capacity for Selective Isolation of Hemoglobin. ACS APPLIED MATERIALS & INTERFACES 2017; 9:28273-28280. [PMID: 28786285 DOI: 10.1021/acsami.7b08942] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Novel unilamellar and homogeneous titanate nanosheets were prepared by anchoring (3-aminopropyl)triethoxysilane (APTES) and chelating copper ions, also know by the short form Cu-APTES-TiNSs. The nanosheets were uniform two-dimensional lamellas/monolayers with a thickness of 1.9 nm, and they were further characterized by atomic force microscopy, scanning electron microscopy, transmission electron microscopy, Fourier transform infrared spectra, X-ray diffraction, X-ray photoelectron spectroscopy, inductively coupled plasma mass spectrometry, and N2 adsorption-desorption. The copper-decorated titanate nanosheets possess a copper content of 4.28 ± 0.14% and exhibit a favorable selectivity to the adsorption of hemoglobin, with a considerable capacity of 5314.2 mg g-1. The adsorbed hemoglobin is easily collected with a recovery rate of 91.3% by using 0.5% w/v sodium dodecyl sulfate as an eluent. Circular dichroism spectra confirmed that virtually no conformational alteration is observed for hemoglobin. Cu-APTES-TiNSs are further applied for the selective adsorption of hemoglobin from the human whole blood.
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Affiliation(s)
- Peng-Fei Guo
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
| | - Dan-Dan Zhang
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
| | - Zhi-Yong Guo
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
| | - Ming-Li Chen
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
| | - Jian-Hua Wang
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
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47
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Salimi K, Usta DD, Çelikbıçak Ö, Pınar A, Salih B, Tuncel A. Highly selective enrichment of phosphopeptides by titanium (IV) attached monodisperse-porous poly(vinylphosphonic acid- co -ethylene dimethacrylate) microspheres. J Chromatogr A 2017; 1496:9-19. [DOI: 10.1016/j.chroma.2017.03.052] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2016] [Revised: 03/17/2017] [Accepted: 03/20/2017] [Indexed: 11/15/2022]
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48
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Ti(IV) carrying polydopamine-coated, monodisperse-porous SiO 2 microspheres with stable magnetic properties for highly selective enrichment of phosphopeptides. Colloids Surf B Biointerfaces 2017; 153:280-290. [DOI: 10.1016/j.colsurfb.2017.02.028] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2016] [Revised: 01/27/2017] [Accepted: 02/20/2017] [Indexed: 11/21/2022]
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49
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Bonvin D, Bastiaansen JA, Stuber M, Hofmann H, Mionić Ebersold M. Chelating agents as coating molecules for iron oxide nanoparticles. RSC Adv 2017. [DOI: 10.1039/c7ra08217g] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Iron oxide nanoparticles coated with chelating agents with different numbers of –COOH dentates (2 to 5) behave differently.
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Affiliation(s)
- Debora Bonvin
- Powder Technology Laboratory
- Institute of Materials
- Ecole Polytechnique Fédérale de Lausanne
- Switzerland
| | - Jessica A. M. Bastiaansen
- Department of Radiology
- University Hospital (CHUV)
- University of Lausanne (UNIL)
- Switzerland
- Center of Biomedical Imaging (CIBM)
| | - Matthias Stuber
- Department of Radiology
- University Hospital (CHUV)
- University of Lausanne (UNIL)
- Switzerland
- Center of Biomedical Imaging (CIBM)
| | - Heinrich Hofmann
- Powder Technology Laboratory
- Institute of Materials
- Ecole Polytechnique Fédérale de Lausanne
- Switzerland
| | - Marijana Mionić Ebersold
- Powder Technology Laboratory
- Institute of Materials
- Ecole Polytechnique Fédérale de Lausanne
- Switzerland
- Department of Radiology
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50
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Li Q, Wang B, Wang J, Xi X, Chu Q, Dong G, Wei Y. Thiazolium-functionalized polymer-coated magnetic microspheres for the selective recognition and separation of hemoglobin. NEW J CHEM 2017. [DOI: 10.1039/c7nj02801f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Thiazolium-functionalized magnetic microspheres, which exhibited an excellent selectivity and a high binding capacity for haemoglobin (5030 mg g−1), were successfully synthesized.
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Affiliation(s)
- Quan Li
- State Key Laboratory of Chemical Resource Engineering
- Beijing University Of Chemical Technology
- Chaoyang District
- China
| | - Binghai Wang
- State Key Laboratory of Chemical Resource Engineering
- Beijing University Of Chemical Technology
- Chaoyang District
- China
| | - Juanqiang Wang
- State Key Laboratory of Chemical Resource Engineering
- Beijing University Of Chemical Technology
- Chaoyang District
- China
| | - Xingjun Xi
- China National Institute of Standardization
- Haidian District
- P. R. China
| | - Qiao Chu
- China National Institute of Standardization
- Haidian District
- P. R. China
| | - Genlai Dong
- China National Institute of Standardization
- Haidian District
- P. R. China
| | - Yun Wei
- State Key Laboratory of Chemical Resource Engineering
- Beijing University Of Chemical Technology
- Chaoyang District
- China
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