A reaction-based ratiometric fluorescent sensor for the detection of Hg(ii) ions in both cells and bacteria

A novel dual-activatable ultrasensitive chemiluminescent probe for mercury (II) monitoring: From rational design to multiple application

Real-time optical sensing of mercury has been developed rapidly in recent years but remains challenging such as bearing background interference. Herein, a Hg2+ and base dual-activatable ultrasensitive chemiluminescent probe CL-Hg based on benzothiazole-phenoxyl-dioxetane with profits of excitation light-free and minimal interference is presented. The photophysical properties study and sensing performance verified CL-Hg is coupled with unique advantages of long-term detection (more than 400 min), ultrahigh sensitivity (LOD = 0.52 nM), and high specificity to Hg2+, and visualization detection by the paper-based test strips. More importantly, CL-Hg showed the qualitative and quantitative detection capability for Hg2+ with great recyclability in real samples of water, seafood, and beverages, holding great potential for on-site monitoring of Hg2+ levels in the actual samples. To our knowledge, this is the first work achieving the detection of Hg2+ by chemiluminescence. Overall, the Hg2+-activated visualization platform offers a practical method for detecting Hg2+ in various application scenarios.

Sulfur-based fluorescent probes for biological analysis: A review

The widespread adoption of small-molecule fluorescence detection methodologies in scientific research and industrial contexts can be ascribed to their inherent merits, including elevated sensitivity, exceptional selectivity, real-time detection capabilities, and non-destructive characteristics. In recent years, there has been a growing focus on small-molecule fluorescent probes engineered with sulfur elements, aiming to detect a diverse array of biologically active species. This review presents a comprehensive survey of sulfur-based fluorescent probes published from 2017 to 2023. The diverse repertoire of recognition sites, including but not limited to N, N-dimethylthiocarbamyl, disulfides, thioether, sulfonyls and sulfoxides, thiourea, thioester, thioacetal and thioketal, sulfhydryl, phenothiazine, thioamide, and others, inherent in these sulfur-based probes markedly amplifies their capacity for detecting a broad spectrum of analytes, such as metal ions, reactive oxygen species, reactive sulfur species, reactive nitrogen species, proteins, and beyond. Owing to the individual disparities in the molecular structures of the probes, analogous recognition units may be employed to discern diverse substrates. Subsequent to this classification, the review provides a concise summary and introduction to the design and biological applications of these probe molecules. Lastly, drawing upon a synthesis of published works, the review engages in a discussion regarding the merits and drawbacks of these fluorescent probes, offering guidance for future endeavors.

Triphenylamine-Based Polythioacetal for Selective Sensing of Mercury(II) with High Specificity and Sensitivity

Utilizing the mercury (Hg2+)-triggered deprotection of thioacetals to aldehyde groups, we constructed a water-soluble triphenylamine (TPA)-based polythioacetal PTA-TPA with thioacetal groups in the backbones for efficient sensing of Hg2+ in aqueous solutions. PTA-TPA is conveniently prepared by polycondensation of 3, 6-dioxa-1,8-octanedithiol (DODT) with 4-(N,N-diphenylamino) benzaldehyde (TPA-CHO) using thiol-terminated mPEG2k-SH as a capping agent. The interaction of Hg2+ with PTA-TPA activates the aggregation-induced emission (AIE) process of TPA-CHO molecules, which makes the emission enhanced, and the emission color changes to sky blue, while other metal ions do not interfere with the sensing process. PTA-TPA can be used as a highly selective and ultrafast detection system for Hg2+ with a low detection limit (LOD) of 9.88 nM and a fast response of less than 1 min. In addition, the prepared test strips report the presence of Hg2+ with an LOD as low as 1 × 10-5 M. Intracellular imaging applications have demonstrated that PTA-TPA acts as a biocompatible fluorescent probe for efficient Hg2+ sensing in HeLa cells. Overall, the PTA-TPA fluorescence probes have the characteristics of easy synthesis, cost-effective, ultrafast detection speed, high selectivity, and high sensitivity, which can be used in practical applications.

Constructing an eco-friendly and ratiometric fluorescent sensor for highly efficient detection of mercury ion in environmental samples

Mercury ion (Hg2+) is a highly toxic and ubiquitous pollutant, whose effective detection has aroused widespread concern. A novel ratiometric fluorescent sensor has been designed to rapidly and efficiently detect Hg2+ based on blue/red carbon dots (CDs) with environmental friendliness. This sensor was well characterized via TEM, FTIR, XPS, UV-vis, and zeta potential analysis and displayed excellent fluorescence properties and stability. The fluorescence of blue CDs at 447 nm was significantly quenched with the addition of Hg2+ resulted from the static quenching, whereas that of red CDs at 650 nm remained invariable. A sensitive method for Hg2+ determination was constructed in the range of 0.05-7.0 nmol mL-1 with optimal conditions, and the detection limit was down to 0.028 nmol mL-1. Meanwhile, compared to other 17 metal ions, the ratiometric fluorescent sensor exhibited high selectivity for Hg2+. Furthermore, satisfied recoveries had also been obtained for measuring trace Hg2+ in practical environmental samples. This developed ratiometric fluorescent sensor provided a reliable, environmental-friendly, rapid, and efficient platform for the detection of Hg2+ in environmental applications.

A naphthalimide functionalized fluoran with AIE effect for ratiometric sensing Hg2+ and cell imaging application

The pollution caused by mercury ions (Hg²⁺) poses a potential threat to public health. Therefore, monitoring Hg²⁺ concentration in the environment is necessary and significant. In this work, a naphthalimide functionalized fluoran dye NAF has been prepared, which shows a new red-shift in emission at 550 nm with the maximum intensity in a mixture of water-CH₃CN (v/v = 7/3) due to aggregating induced emission (AIE) effect. Meanwhile, NAF can be employed as a Hg²⁺ ions sensor, which displays a selective and sensitive response to Hg²⁺ ions by the reduced fluorescence of naphthalimide fluorophore and increased fluorescence of fluoran group, respectively, showing ratiometric fluorescence signal changes with more than 65-fold emission intensity ratio increase and naked eyes visible color change. In addition, the response time is fast (within 1 min) and the sensing can be conducted in a wide pH range (4.0-9.0). Moreover, the detection limit has been evaluated to be 5.5 nM. The sensing mechanism may be attributed to the formation of a π-extended conjugated system due to the Hg²⁺ ions-induced conversion of spironolactone to the ring-opened form, partially accompanied by the fluorescence resonance energy transfer (FRET) process. Significantly, NAF exhibits suitable cytotoxicity to living HeLa cells, which allows it to be utilized for ratiometric imaging of Hg²⁺ ions assisted by confocal fluorescence imaging.

The potential of microorganisms as biomonitoring and bioremediation tools for mercury-contaminated soils

Mercury (Hg) pollution is a global issue due to the high toxicity and wide dispersion of Hg around the world. Whether due to anthropogenic activities or natural processes, Hg emissions are steadily increasing, with very high levels in some regions, directly threatening human and ecosystem health. However, bacteria and fungi have evolved and adapted in response to Hg-induced stress and have developed tolerance mechanisms, notably based on the mer operon system that is involved in Hg uptake and biovolatilization via Hg reduction reactions. Other processes, such as bioaccumulation or extracellular sequestration, are involved in Hg resistance, and the study of contaminated soils has allowed the isolation of a number of microorganisms capable of these mechanisms, with strong potential for the implementation of bioremediation approaches. In addition to playing an important role in determining the fate of Hg in the biogeochemical cycle, these microorganisms can indeed be applied to reduce Hg concentrations or at least stabilize Hg for the remediation of polluted soils. Moreover, thanks to the development of biotechnological tools, bioremediation based on Hg-tolerant microorganisms can be optimized. Finally, these microorganisms are relevant candidates for biomonitoring, for example, through the engineering of biosensors, because the detection of Hg is a major issue in preserving the health of living beings.

Hg(II) immobilization and detection using gel formation with tetra-(4-pyridylphenyl)ethylene and an aggregation-induced luminescence effect

Tetra-(4-pyridylphenyl)ethylene (TPPE), featuring an aggregation-induced luminescence effect (AIE), has been synthesized and used for selective detection of Hg²⁺ in DMF/H₂O (3:7, v/v) binary solutions. There was a color change from colorless to yellow in the detection of the Hg²⁺ ions, in addition to an increased fluorescence emission. This shows that TPPE will function as an excellent "turn-on" fluorescence probe in the detection Hg²⁺. Moreover, the interference of Al³⁺, Ba²⁺, Mn²⁺, Ca²⁺, Fe³⁺, Cu²⁺, Ag⁺, Cd²⁺, Co²⁺, Ni²⁺, Mg²⁺, Pb²⁺, Zn²⁺, and Cr³⁺ ions was found to be negligible under optimized solvent conditions. Cysteine and EDTA were also found to form TPPE-based fluorescent switches with the Hg²⁺ ions. The practical use of the TPPE sensor was also demonstrated by using a specific test kit. Characterization using FT-IR, NMR titration, UV titration, EDS, and HR-MS techniques showed that Hg²⁺ will form a 1:1 complex with TPPE. Also, the observation of a Tyndall effect, in addition to UV absorption and fluorescence spectra, did clearly demonstrate the presence of an AIE. More noteworthy, TPPE and Hg²⁺ were found to form a metal-organic gel (MOG) in the DMF solution. The SEM, TEM, ICP, and Zeta potential analyses confirmed that the fluorescent MOG could further adsorb an excess of Hg²⁺ ions. The BET analyses revealed that the MOG showed a type IV-H3 hysteresis loop according to the International Union of Pure and Applied Chemistry classification. The results of the XRD analysis and of the spectroscopic titrations show that a π-π stacking may be the auxiliary driving force for the gel formation, after that a coordination has taken place. These results indicate that further research on structurally simple metal ion fluorescent probes, which are based on the AIE, is promising for the achievement of a simultaneous fluorescent detection and adsorption of heavy metal pollutants.

A FRET-based ratiometric fluorescent probe for Hg2+ detection in aqueous solution and bioimaging in multiple samples

Mercury ion, as a metal cation with great toxic effect, is widely present in various production and living environments. It seriously threatens human health and environmental safety. It is of great significance to develop convenient and effective methods for mercury ion detection. Here, we designed and synthesized a new ratiometric fluorescent probe (namely APS-NA) for the detection of mercury ions in the environment and multiple biological samples. The probe is constructed by covalently connecting two fluorophores with lipolic acid to achieve fluorescence resonance energy transfer (FRET). In the molecular structure of APS-NA, acridone is used as an energy donor, 1,8-naphthalimide is used as an energy acceptor, and a dithioacetal group is used as the reaction site for Hg²⁺. The intact APS-NA mainly shows the green fluorescence from the acceptor moiety 1,8-naphthalimide; the presence of Hg²⁺ ions would break the dithioacetal linkage between acridone and 1,8-naphthalimide; the defunctionalization of FRET would lead to bright blue fluorescence emission of acridone; thus ratiometric fluorescent detection of Hg²⁺ can be achieved by this recognition process. The probe not only has a large Stokes shift (Δλ = 110 nm), but also has high selectivity, high sensitivity (low detection limit 30 nM) and naked eye visualization. In addition, we have successfully used this probe for the detection Hg²⁺ of actual samples and imaging of a variety of organisms. These results indicate that the probe has broad application prospects.

A pyridyl functionalized rhodamine chemodosimeter for selective fluorescent detection of mercury ions and cell imaging

Rhodamines gain sustained attention owing to their great potential for probe design applications. Herein, the facile preparation of a new pyridyl functionalized rhodamine dye PR is reported, which has stable fluorescence signal in water with maximum emission peak at 594 nm and Stokes shift of 81 nm. Based on dye PR, a new fluorescent probe PRHg has been developed by modifying the spirolactone of PR with hydrazine hydrate so as to produce spirolactam recognizing group for sensing of Hg²⁺. PRHg exhibits high selectivity and sensitivity towards Hg²⁺ in water/ethanol (v/v = 4/1, pH = 7.0) by a specific Hg²⁺-binding promoted spirolactam ring opening and hydrolyzing process. And, the detection limit for Hg²⁺ is evaluated to be 8.5 nM. Besides, the probe can respond to Hg²⁺ within 40 min and over a wide pH range from 4.0 to 10.0. Moreover, PRHg (40 µM) performs low cytotoxicity to HeLa cells (over 91.0 % cell survival rate), which allows the probe to be employed for tracing intracellular Hg²⁺ by fluorescence imaging.

A quinoline-rhodamine hybrid probe for ratiometricly sensing of Hg2+ in water and cell imaging application

To develop efficient tools for monitoring toxicant Hg²⁺ in aqueous solution attracts great attention because the abnormal distribution of Hg²⁺ in environment poses great threat to human health. We here report the preparation of a novel quinoline-rhodamine hybrid fluorescent probe P7RHg for ratiometricly sensing of Hg²⁺ in water, with a spirolactam-thiosemicarbazide reaction group. Upon treatment by Hg²⁺, the ratio of fluorescence intensity (F₆₀₀/F₄₆₀) exhibits nearly 90-fold enhancement, presenting two well-resolved emission peaks (140 nm). Meanwhile, the specific Hg²⁺-induced desulfurization provides probe P7RHg an excellent selectivity to Hg²⁺, with a detection limit of 8.6 nM. Moreover, the low cytotoxicity allows P7RHg to be employed for tracing Hg²⁺ in living cells by confocal fluorescence imaging.

A Benzothidiazole-Based Reversible Fluorescent Probe with Excellent Performances in Selectively and Sensitively Sensing of Hg2+ in Water

The development of mercury ion selective fluorescent probe is significant because it is one of toxic heavy metals and poses great risks and hazards to human health. Herein, we develop a mercury ion-selective fluorescent probe, namely IB, based on imidazole decorated benzothiadiazole that obtained by a facile palladium catalytic C-N coupling reaction. IB exhibits high selectivity and sensitivity towards mercury ion in water with nearly 32-fold fluorescent enhancement. The detection limit is calculated to be 0.93 nmol/L. In addition, the sensing of mercury ion can be conducted in a wide pH scope ranging from 4.0 to 10.0. Subsequently, the mercury ion elicits fluorescence of IB solution can be quenched by the addition of cyanide anions, showing "off-on-off" fluorescence transformation with at least 5 cycles, demonstrating the reversible sensing ability of IB. Furthermore, an INHIBIT logical detector has been developed using mercury ion and cyanide anions as inputs and fluorescence of IB as output. Significantly, IB can be utilized for mercury ion detection in real water sample.

A "bottle-around-ship" method to encapsulated carbon nitride and CdTe quantum dots in ZIF-8 as the dual emission fluorescent probe for detection of mercury (II) ion

A facile and efficient "bottle-around-ship" approach for preparing the ratiometric fluorescent probe has been developed by encapsulating the red-colored fluorescence CdTe quantum dots (QDs) and blue-colored fluorescence graphitic carbon nitride quantum dots (g-CNQDs) into the zeolitic imidazolate metal-organic frameworks (ZIF-8) in one step. At a single excitation of 360 nm, the obtained probe ZIF-8@g-CNQD/CdTe shows the dual-emission peaked at 450 and 633 nm, respectively. The red emission of CdTe QDs is selectively quenched by the Hg²⁺, whereas the blue fluorescence of g-CNQDs as an internal reference is insensitive, resulting in an apparent color transformation from pink to blue for special recognition of Hg²⁺. By this approach, the relative fluorescence intensity ratio (F₆₃₃/F₄₅₀) decreased linearly with increasing Hg²⁺ concentration in the 0.2-3.5 μM range with a low limit of detection (LOD) of ~ 46 nM. Therefore, we demonstrate that this "bottle-around-ship" process provides a new strategy for the construction of ratiometric fluorescent Hg²⁺ probes with good simplicity, high efficiency, and excellent stabilities. Moreover, the obtained Hg²⁺ fluorescent probe shows good results in the detection of actual samples.

Recent Progress in Fluorescent Probes For Metal Ion Detection

All forms of life have absolute request for metal elements, because metal elements are instrumental in various fundamental processes. Fluorescent probes have been widely used due to their ease of operation, good selectivity, high spatial and temporal resolution, and high sensitivity. In this paper, the research progress of various metal ion (Fe³⁺,Fe²⁺,Cu²⁺,Zn²⁺,Hg²⁺,Pb²⁺,Cd²⁺) fluorescent probes in recent years has been reviewed, and the fluorescence probes prepared with different structures and materials in different environments are introduced. It is of great significance to improve the sensing performance on metal ions. This research has a wide prospect in the application fields of fluorescence sensing, quantitative analysis, biomedicine and so on. This paper discusses about the development and applications of metal fluorescent probes in future.

Extracellular proteins of Desulfovibrio vulgaris as adsorbents and redox shuttles promote biomineralization of antimony

Biomineralization is the key process governing the biogeochemical cycling of multivalent metals in the environment. Although some sulfate-reducing bacteria (SRB) are recently recognized to respire metal ions, the role of their extracellular proteins in the immobilization and redox transformation of antimony (Sb) remains elusive. Here, a model strain Desulfovibrio vulgaris Hildenborough (DvH) was used to study microbial extracellular proteins of functions and possible mechanisms in Sb(V) biomineralization. We found that the functional groups (N-H, CO, O-CO, NH₂-R and RCOH/RCNH₂) of extracellular proteins could adsorb and fix Sb(V) through electrostatic attraction and chelation. DvH could rapidly reduce Sb(V) adsorbed on the cell surface and form amorphous nanometer-sized stibnite and/or antimony trioxide, respectively with sulfur and oxygen. Proteomic analysis indicated that some extracellular proteins involved in electron transfer increased significantly (p < 0.05) at 1.8 mM Sb(V). The upregulated flavoproteins could serve as a redox shuttle to transfer electrons from c-type cytochrome networks to reduce Sb(V). Also, the upregulated extracellular proteins involved in sulfur reduction, amino acid transport and protein synthesis processes, and the downregulated flagellar proteins would contribute to a better adaption under 1.8 mM Sb(V). This study advances our understanding of how microbial extracellular proteins promote Sb biomineralization in DvH.

A small molecule fluorescent probe for mercury ion analysis in broad low pH range: Spectral, optical mechanism and application studies

Development of new fluorescent probes for mercury ion analysis in environmental or living organism is undergoing quick growth due to its detrimental toxicity to environmental safety, ecological security, and human being. However, in most cases, the industrial waste water is acidic whereas it remains a great challenge to real-time monitor mercury ion directly at low pH using small molecule fluorescence probe. In this study, we have successfully designed and synthesized the Naph (1, 8-Naphthalimide derivative) -based small molecule probe termed as Naph-NSS capable of monitoring mercury ion in a broad range at low pH (from 2.0 to 7.0). The solid spectral studies demonstrated the high sensitivity and selectivity of the probe towards mercury ion among various species. After binding with Hg²⁺, the fluorescence of Naph-NSS greatly enhanced, and the mechanism of which was investigated by DFT studies. The probe was able to be loaded on paper strip for instant and fast detection of mercury ions. In addition, the probe is also suitable for detection of mercury ion in environmental samples, living cells and in vivo.

Pd-Catalyzed cross-coupling synthesis of 4-aryl-3-formylcoumarins

The threefold cross-coupling of triarylbismuth reagents with 4-chloro-3-formylcoumarins furnished the corresponding 4-aryl-3-formylcoumarins in a chemoselective manner with high yields under Pd-catalyzed conditions. This method was successfully applied to electronically different triarylbismuth reagents and 4-chloro-3-formylcoumarins preserving the 3-formyl group in the coumarin scaffold.

Quantitative Hg2+ detection via forming three coordination complexes using a lysosome targeting quinoline - Fisher aldehyde fluorophore

This work describes (Z)-N-((Z)-2-(1,3,3-trimethylindolin-2ylidene)ethylidene)quinoline-8-amine (LYSO-QF), a high-performing and biocompatible dye comprised of quinoline and Fisher aldehyde moieties linked via an imine vinyl backbone with lysosome targeting ability that can be used to quantitatively detect the mercury ion (Hg²⁺) in biosystems and the natural environment. This is achieved by forming three different tetrameric, trimeric and dimeric complexes between Hg²⁺ and LYSO-QF with the limit of detection (LOD) of 11 nm. The complexes formed were analyzed with the aid of time-dependent density functional theory (TD-DFT) calculations. The concentration dependence of the Hg²⁺ complex fluorescence emission changes from grey-green to jade green and then to red as the different types of complex are formed. The favorable sensor properties of the LYSO-QF probe are demonstrated by monitoring different Hg²⁺ concentrations in buffer solutions, HeLa cells, zebrafish model samples and several different types of water sample. Experiments with Whatman paper strips demonstrate that the cost-effective LYSO-QF also has considerable potential for use in on-site Hg²⁺ detection with the naked eye.

Tb3+ luminescence cholate hydrogel-based multi-functionalized platform for Hg2+ and NO2 detection

In this paper, Tb3+ luminescence cholate hydrogel (Tb3+/hydrogel) was selected as a multi-functionalized platform, and PS-BD@Tb3+/hydrogel or PS-BS@Tb3+/hydrogel systems were fabricated respectively for selective detecting of Hg2+ in water and...

Small-molecule fluorescent probes based on covalent assembly strategy for chemoselective bioimaging

In this review, we comprehensively summarize the recent progress in the development of small molecular fluorescent probes based on the covalent assembly principle. The challenges and perspective in this field are also presented.

A simple strategy for the visual detection and discrimination of Hg2+ and CH3Hg+ species using fluorescent nanoaggregates

Fluorescent nanoaggregates (FNAs) based on phenanthroline-based amphiphiles show changes in solution color from colorless to yellow upon addition of both Hg²⁺ (LOD ∼4 ppb) and CH₃Hg⁺ (LOD ∼18 ppb). However, the extent of fluorescence quenching is more prominent with Hg²⁺ (∼12 fold) than with CH₃Hg⁺ (∼4 fold). Also, unlike Hg²⁺, the interaction of CH₃Hg⁺ needs more time, ∼10 min at room temperature. Experimental evidence indicates that both mercury species coordinate with the phenanthroline unit and facilitate the charge transfer interaction while destabilizing the nanoassembly. The lower charge density on CH₃Hg⁺ along with its large size compared to Hg²⁺ may be the reason for such observations. Interestingly, FNAs show a selective response towards CH₃Hg⁺ when pre-treated with EDTA. Further, analysis of heavy metal pollutants in drinking water and biological samples was performed. High recovery values ranging from 96% to 103.0% were estimated along with relatively small standard deviations (<3%). Low-cost, reusable test strips were designed for rapid, on-site detection of mercury species. Further, the in situ formed metal complexes are allowed to interact with thiol-containing amino acids. As expected, CH₃Hg⁺, being less thiophillic, endures less interaction with cysteine. Mechanistic investigations indicate that thiolated amino acids can bind with the metal ion center and form a tertiary complex (cooperative interaction).

"Covalent-Assembly"-Triggered Striking Far-Red to near-Infrared Emitting Fluorescent Probe for Abrupt Detection of Nerve-Agent Mimic (DCP): Real Time Application in Monitoring the Presence of Trace Amounts in Soil and Live Cells

Detection of chemical warfare agents (CWA) by simple and rapid methods with real-sample applications are quite inevitable in order to ease the threats to living systems caused by uncertain terror attacks and wars. Herein we have developed the first far-red to near infra-red (NIR) probe based on a covalent assembly approach for the detection of trace amounts of nerve agent mimic diethyl chloro phosphate (DCP) in soil and their fluorescent bio imaging in live cells. The probe features abrupt fluorescence turn on sensing of DCP with fluorescence quantum yield Φ = 0.622. It senses DCP selectively over other analytes in excellent sensitivity with a detection limit of 6.9 nM. In real time, the probe treated strips were employed to detect the DCP vapor effectively with eye catching fluorescence response. The presence of trace amounts of these acute warfare agents in the environment were monitored by soil analysis. Further fluorescent bio imaging was carried out to monitor trace level DCP in living cells using the HeLa cell line.

Copper(II)-Catalyzed Tandem Reaction: Synthesis of Furo[3,2-c]coumarin Derivatives and Evaluation for Photophysical Properties

An efficient protocol for synthesizing furo[3,2-c]coumarin derivatives is described. The novel reaction could afford the desired furocoumarins with good to excellent yields in a mild and rapid manner. Large substrate scope screening and scale-up preparation have also been accomplished, and selected compounds were evaluated for their photophysical properties.

Strategies of Detecting Bacteria Using Fluorescence-Based Dyes

Identification of bacterial strains is critical for the theranostics of bacterial infections and the development of antibiotics. Many organic fluorescent probes have been developed to overcome the limitations of conventional detection methods. These probes can detect bacteria with "off-on" fluorescence change, which enables the real-time imaging and quantitative analysis of bacteria in vitro and in vivo. In this review, we outline recent advances in the development of fluorescence-based dyes capable of detecting bacteria. Detection strategies are described, including specific interactions with bacterial cell wall components, bacterial and intracellular enzyme reactions, and peptidoglycan synthesis reactions. These include theranostic probes that allow simultaneous bacterial detection and photodynamic antimicrobial effects. Some examples of other miscellaneous detections in bacteria have also been described. In addition, this review demonstrates the validation of these fluorescent probes using a variety of biological models such as gram-negative and -positive bacteria, antibiotic-resistant bacteria, infected cancer cells, tumor-bearing, and infected mice. Prospects for future research are outlined by presenting the importance of effective in vitro and in vivo detection of bacteria and development of antimicrobial agents.

Bicolour fluorescent molecular sensors for cations: design and experimental validation

Molecular entities whose fluorescence spectra are different when they bind metal cations are termed bicolour fluorescent molecular sensors. The basic design criteria of this kind of compound are presented and the different fluorescent responses are discussed in terms of their chemical behaviour and electronic features. These latter elements include intramolecular charge transfer (ICT), formation of intramolecular and intermolecular excimer/exciplex complexes and Förster resonance energy transfer (FRET). Changes in the electronic properties of the fluorophore based on the decoupling between its constitutive units upon metal binding are also discussed. The possibility of generating fluorescent bicolour indicators that can capture metal cations in the gas phase and at solid-gas interfaces is also discussed.

A simple sensitive ratiometric fluorescent probe for the detection of mercury ions in living cells and zebrafish

Mercury, as a highly toxic heavy metal, can cause very serious harm to human health and even death in severe cases. Therefore, we synthesized a novel ratiometric fluorescent probe for detecting mercury ions, with mercaptoethanol as the recognition receptor. Probe CMER could determine mercury ions in 0-1.6 μM and the detection limit is 7.6 nM. Moreover, CMER manifested a fast response for Hg²⁺ (within 5 s) and simultaneously observed that the color changed from light yellow to orange by naked eye. In addition to these preeminent spectral properties, the probe also had satisfactory bioimaging results in RAW 264.7 macrophage cells and zebrafish.

The application of amide units in the construction of neutral functional dyes for mitochondrial staining

To develop a new class of neutral fluorescent dyes with mitochondrial staining capacity, a series of functional dyes were obtained from Nile red (2a–e) and coumarin (3a–e) with different amide compounds via Suzuki coupling reactions.

A reaction-based ratiometric fluorescent probe for mercury ion detection in aqueous solution

Mercury ions are crucially harmful to ecosystem and human being due to their characters of bioaccumulation and difficulty of biochemical degradation. Therefore, development of mercury ion detection methods has attracted increasing interests recently. In this study, we successfully synthesized a hydroxyphenylbenzothiazole (HBT)-based fluorescent probe HBT-Hg in an extremely simple manner for mercuric ions detection. The spectral studies revealed that the probe HBT-Hg could react with Hg²⁺ selectively and sensitively in PBS buffer (10 mM, pH = 7.40), showing ratiometric fluorescent changes from blue to light green. The response mechanism of the probe HBT-Hg and Hg²⁺ was finally confirmed by HPLC analysis, viz., the probe HBT-Hg converted to its precursor compound 1. Finally, the probe HBT-Hg was successfully applied in monitoring Hg²⁺ in living A549 cells.

Bumpy Roads Lead to Beautiful Places: The Twists and Turns in Developing a New Class of PN-Heterocycles

The Haley and Johnson labs at the University of Oregon have been collaborating since 2006, combining skillsets in synthetic organic, physical organic, and supramolecular chemistries. This joint project has produced many examples of host molecules that bind anionic guests and give chemical, photophysical, and/or electrical responses. Many of these receptors utilize two-armed arylethynyl backbones that have a variety of hydrogen- or halogen-bonding functional groups appended. However, in attempts to produce a bisamide-containing host using a peptide-coupling protocol with P(OPh)3 present, we isolated something unexpected – a heterocycle containing neighboring P and N atoms. This ‘failed’ reaction turned into a surprisingly robust synthesis of phosphaquinolinones, an unusual class of PN-heterocycles. This Account article tells the rollercoaster story of these heterocycles in our lab. It will highlight our key works to this field, including a suite of fundamental studies of both the original PN-naphthalene moiety, as well as a variety of structural modifications to the arene backbone. It will also discuss the major step forward the project took when we developed a phosphaquinolinone-containing receptor molecule capable of binding HSO4 – selectively, reversibly, and with recyclability. With these findings, the project has gone from hospice care to making a full, robust recovery.

1 Introduction

2 Initial Discovery

3 Setbacks Breathe New Life

4 A New Dynamic Duo Develops Dozens of Derivatives

5 Physicochemical Characterization

5.1 Fluorescence

5.2 Molecular Structures

5.3 Solution Dimerization Studies

6 Applying What We Have Learned

6.1 Development of Supramolecular Host

6.2 Use of PN Moiety as an Impressive Fluorophore

7 Conclusions and Outlook

A novel near-infrared fluorescent sensor for zero background nitrite detection via the "covalent-assembly" principle

Different chemical states of nitrogen are present in many freshwater and marine ecosystems, and nitrite ions are one of the most toxic water-soluble nitrogen species. Developing an effective and convenient sensing method to constantly detect the concentration of nitrite has become a wide concern. Here, a novel near-infrared fluorescent probe (AAC) was designed and synthesized via the "covalent assembly" principle, showing excellent selectivity and high sensitivity for nitrite. A new nitrite-quantitative method was established with the help of AAC, and the detection limit of nitrite using the new method was as low as 6.7 nM. AAC was successfully applied for the quantitative detection of nitrite in real-world environmental and food samples (including river water and Chinese sauerkraut), and the detection results were essentially identical to the results obtained from the traditional Griess assay. Moreover, AAC was successfully applied for tracking nitrite in Escherichia coli by fluorescence imaging. Since nitrite can have devastating effects, the method established with AAC allowed us to "see" effectively about the water quality, food quality, etc.

Bioluminescence-Triggered Photoswitchable Bacterial Adhesions Enable Higher Sensitivity and Dual-Readout Bacterial Biosensors for Mercury

We present a new concept for whole-cell biosensors that couples the response to Hg²⁺ with bioluminescence and bacterial aggregation. This allows us to use the bacterial aggregation to preconcentrate the bioluminescent bacteria at the substrate surface and increase the sensitivity of Hg²⁺ detection. This whole-cell biosensor combines a Hg²⁺-sensitive bioluminescence reporter and light-responsive bacterial cell-cell adhesions. We demonstrate that the blue luminescence in response to Hg²⁺ is able to photoactivate bacterial aggregation, which provides a second readout for Hg²⁺ detection. In return, the Hg²⁺-triggered bacterial aggregation leads to faster sedimentation and more efficient formation of biofilms. At low Hg²⁺ concentrations, the enrichment of the bacteria in biofilms leads to an up to 10-fold increase in the signal. The activation of photoswitchable proteins with biological light is a new concept in optogenetics, and the presented bacterial biosensor design is transferable to other bioluminescent reporters with particular interest for environmental monitoring.

Synthesis, structure-fluorescence relationships and density functional theory studies of novel naphthalimide-piperazine-pyridine-based polystyrene sensors for Hg(ii) detection

Two novel naphthalimide–piperazine–pyridine-based polystyrene solid-phase fluorescent sensors PS-NA and PS-ND with different lengths of the linker were synthesized and shown to be able to detect Hg(ii) ions. Their structures were characterized by Fourier transform infrared (FTIR) spectroscopy and scanning electron microscopy (SEM) analysis. Fluorescence properties, including response time, pH effects, fluorescence titration, metal ion selectivity and regeneration, were investigated and compared. Sensor PS-NA displayed a higher fluorescence response to Hg(ii) than PS-ND, with a lower detection limit of 1.01 μM. The detection mechanism involving the Hg(ii) chelation-induced photo-induced electron transfer (PET) was proposed with the aid of density functional theory (DFT) calculations. Sensors PS-NA and PS-ND with seven other similar sensors from our previous studies were collected together for thorough structure–fluorescence relationship (SFR) studies. Sensor PS-NA being recyclable and environmentally friendly was successfully employed in the fluorescence detection of Hg(ii) in real water samples, indicating its good potential in practical application.

Naphthalimide-appended polystyrene fluorescent sensors.

Azide functionalized porphyrin based dendritic polymers for in vivo monitoring of Hg2+ ions in living cells

A porphyrin cored azide functionalised dendritic polymer was developed as a selective sensor for in vivo monitoring of mercuric ions in living (normal and cancer) cells and in an aqueous medium. The developed sensor could sense mercuric ions even at a nanomolar concentration with a limit of detection value of 0.9 nM. This probe can be used to monitor mercuric ions in living cells due to its low cytotoxicity and high cell permeability. The hydrophilic nature of the polymer makes it a promising candidate for sensing mercuric ions in real water samples. Moreover, the reversibility of this sensing strategy helps in constructing a logic gate, which is particularly useful in smart sensor design.

Fluorescent difference between two rhodamine-PAHs polystyrene solid-phase sensors for Hg(II) detection based on crystal structure and density functional theory calculation

Two novel rhodamine-polystyrene solid-phase fluorescence sensors PS-RB-2 and PS-R6G-2 with pyrene or naphthalene as fluorophore were synthesized for Hg(II) detection. Their structures were characterized by Fourier transform infrared (FTIR) spectra and scanning electron micrographs (SEM). Sensor PS-RB-2 displayed higher selectivity and sensitivity to Hg(II), with a lower detection limit of 0.065 μM. A detection mechanism involving the Hg(II) chelation-induced spirocycle open of rhodamine was proposed and discussed from theoretic level based on crystal structures and density functional theory (DFT) calculations. Sensor PS-RB-2 with recyclable and environment-friendly performance was successfully employed to fluorescent detection of Hg(II) in real water and fish samples, indicating its good potential in practical application. Its solid phase extraction columns were developed for rapid detection of Hg(II) by observing the color change with the naked eyes.

A coumarin-based fluorescent probe for Hg2+ and its application in living cells and zebrafish

Mercury (Hg) is a heavy metal with high toxicity and easy migration; it can be enriched through the food chain, and cause serious threats to the natural environment and human health. So, the development of a method that can be used to detect mercury ions (Hg²⁺ ) in the environment, in cells, and in organisms is very important. Here, a new 7-hydroxycoumarin-derived carbonothioate-based probe (CC-Hg) was designed and synthesized for detection of Hg²⁺ . After addition of Hg²⁺ , a large fluorescence enhancement was observed due to the formation of 7-hydroxyl, which reinforced the intramolecular charge transfer process. The CC-Hg probe had good water solubility and selectivity. Moreover, the probe was able to detect Hg²⁺ quantitatively over the concentration range 0-2 μM and with a detection limit of 7.9 nM. Importantly, we successfully applied the probe to detect Hg²⁺ in water samples, in living cells, and in zebrafish. The experimental results demonstrated its potential value in practical applications.

A Fluorescent and Colorimetric Chemosensor for Hg2+ Based on Rhodamine 6G With a Two-Step Reaction Mechanism

A fluorescent and colorimetric chemosensor L based on rhodamine 6G was designed, synthesized, and characterized. Based on a two-step reaction, the chemosensor L effectively recognized Hg²⁺. The interaction between the chemosensor and Hg²⁺ was confirmed by ultraviolet–visible spectrophotometry, fluorescence spectroscopy, electrospray ionization–mass spectrometry, Fourier-transform infrared spectroscopy, and frontier molecular orbital calculations. The chemosensor L was also incorporated into test strips and silica gel plates, which demonstrated good selectivity and high sensitivity for Hg²⁺.

Synthetic ratiometric fluorescent probes for detection of ions

Metal cations and anions are essential for versatile physiological processes. Dysregulation of specific ion levels in living organisms is known to have an adverse effect on normal biological events. Owing to the pathophysiological significance of ions, sensitive and selective methods to detect these species in biological systems are in high demand. Because they can be used in methods for precise and quantitative analysis of ions, organic dye-based ratiometric fluorescent probes have been extensively explored in recent years. In this review, recent advances (2015-2019) made in the development and biological applications of synthetic ratiometric fluorescent probes are described. Particular emphasis is given to organic dye-based ratiometric fluorescent probes that are designed to detect biologically important and relevant ions in cells and living organisms. Also, the fundamental principles associated with the design of ratiometric fluorescent probes and perspectives about how to expand their biological applications are discussed.