Ecosystem impacts of three sequential hurricanes (Dennis, Floyd, and Irene) on the United States' largest lagoonal estuary, Pamlico Sound, NC

Typhoon-induced stormwater drives nutrient dynamics and triggers phytoplankton blooms in Laizhou Bay, China

In this study, we investigated the hydrological and ecological impacts of heavy rainfall caused by the storm Rumbia and Typhoon Lekima on Laizhou Bay (LZB) through land‒sea synchronous field surveys, online remote sensors, and simulated enclosure experiments. Within two weeks of Rumbia, approximately 9% and 16% of the annual riverine total nitrogen (TN) and total phosphorus (TP) fluxes, respectively, were transported to the LZB and the proportions were 17% and 35%, respectively, for Lekima. The land use on the watersheds increased the rates of land-derived nutrient loading and altered their biogeochemical forms. Consequently, the average concentrations of dissolved inorganic nitrogen (DIN) and phosphorus (DIP) in the LZB increased by 2.6 and 1.0 times post-Rumbia and by 3.5 and 1.3 times post-Lekima, respectively. Relatively lower salinity and temperature, sudden increases in DIN, and strengthened coastal currents stimulated the growth of highly adaptable and small diatoms, resulting in the first diatom blooms. Subsequently, a bloom of Noctiluca scintillans formed.

The impact of extreme precipitation on physical and biogeochemical processes regarding with nutrient dynamics in a semi-closed bay

An extreme precipitation event in August 2012 changed the ecosystem of Jiaozhou Bay (JZB), China. Biochemical variables in the sea, river mouths, and rainwater were monitored simultaneously during the event. The impact of the following excessive riverine input and wet atmospheric deposition on nutrient dynamics were studied before. However, regulatory processes of nutrient dynamics were not quantified and analyzed. Therefore, a coupled physical-biological model (FVCOM-ERSEM) was used to study the physical and biochemical mechanisms of the variation of the dissolved inorganic nitrogen (DIN), phosphorus (DIP), and silicon (DISi), as well as chlorophyll-a (Chl-a). The results indicate that physical processes increase nutrients, while biological processes reduce them. The exchange with the Yellow Sea, as an important physical process, exports DIN to the Yellow Sea, but imports DIP and DISi to the JZB. Only 20 % of the excessive DIN due to extreme precipitation event was reduced by water exchange with the Yellow Sea. The rest (80 %) was reduced and changed into organic nitrogen through biological processes. This paper also examines the variation of the pelagic and benthic cycles of biochemical processes. In these cycles, phytoplankton take up and use nutrients in the bay, while zooplankton excretion in the pelagic cycle and benthic releases resupply them. Precipitation enriched the surface nutrients, which boosted primary production and organic matter transport to the bottom water.

Co-occurrence of freshwater and marine phycotoxins: A record of microcystins and domoic acid in Bogue Sound, North Carolina (2015 to 2020)

Harmful algal blooms (HABs) create issues both environmentally and economically in coastal regions, especially if algal growth is linked to the production of toxins which can affect ecosystems, wildlife, and humans. This study is the first to confirm near year-round presence and co-occurrence of microcystins (MCs) and domoic acid (DA) within the outskirts of the largest lagoonal US estuary, the Pamlico-Albemarle Sound System (PASS). Monthly sampling at a time-series location in Bogue Sound, located within the eastern part of the PASS, showed DA and MCs were commonly present and detected together 50% of the time based on an in situ toxin tracking approach over a 6-year time period (2015-2020). Particulate toxin concentrations based on monthly grab sampling remained well below regulatory thresholds for MCs and below DA concentrations associated with animal sickness and mortality elsewhere. Time-integrated levels for dissolved MCs and DA, however, indicated a continuous presence of both toxins within Bogue Sound where high flushing rates (∼2-day average residence time) presumably alleviate potential issues linked to nutrient inputs, subsequent algal growth, or toxin accumulation. Pseudo-nitzschia spp. contributed 0 to 19% to the resident microplankton community. Light microscopy analyses did not reveal the source of MCs production in the sound but suggested potential downstream transport and/or autochthonous production due to taxa not accounted for in this study (e.g., picocyanobacteria). Nitrate+nitrite (NO_x) concentrations, wind speed, and water temperature explained a third of the variations in accumulated dissolved MCs, but no relationship was seen for DA concentrations based on monthly sampling within this highly dynamic system. This study emphasizes the importance of continued algal toxin monitoring in systems like Bogue Sound which might experience decreases in water quality similar to adjacent, nutrient-impaired regions within the PASS.

Beneath the surface: spatial and temporal trends in water quality and its impacts on algal community composition in the Albemarle Sound, North Carolina

Urban and agricultural expansion and intensification pose a critical threat to water quality and aquatic ecosystems. Increased nutrient loading into waterways combined with warming temperatures due to climate change have increased eutrophication and algal blooms. The relationship between land use, nutrient availability, and algal growth can vary dramatically across space and time, but few studies have captured this variation. The goal of this research is to assess water quality across time and disparate land uses, and its influence on algal community composition in the Albemarle Sound, a brackish water estuary in North Carolina. We collected water quality data from 21 sites across the sound, visiting six sites in Chowan County biweekly and 15 other sites twice between June and August 2020. Water samples from each site were tested for nitrate, phosphate, ammonia, bicarbonate, and total phosphorus (TP). Preserved algal samples from the six Chowan County sites were enumerated under a microscope to estimate genus richness and biomass. In the Chowan County sites, phosphorus increased and nitrate decreased over the course of the summer. Across all sites, TP increased with development and agricultural land use. These results suggest that sources of nitrogen and phosphorus in the sound differ. Algal richness increased with nitrate concentration and decreased with precipitation while biomass increased with water temperature. Our results indicate that climate change impacts, particularly increasing temperatures and extreme precipitation, influence how land use, water quality, and algal community composition interact. These data demonstrate the co-benefits of mitigating climate change in developing management strategies to reduce algal blooms.

Supplementary Information

The online version contains supplementary material available at 10.1007/s10452-023-10008-y.

Tropical cyclones: what are their impacts on phytoplankton ecology?

Following the passage of a tropical cyclone (TC) the changes in temperature, salinity, nutrient concentration, water clarity, pigments and phytoplankton taxa were assessed at 42 stations from eight sites ranging from the open ocean, through the coastal zone and into estuaries. The impacts of the TC were estimated relative to the long-term average (LTA) conditions as well as before and after the TC. Over all sites the most consistent environmental impacts associated with TCs were an average 41% increase in turbidity, a 13% decline in salinity and a 2% decline in temperature relative to the LTA. In the open ocean, the nutrient concentrations, cyanobacteria and picoeukaryote abundances increased at depths between 100 and 150 m for up to 3 months following a TC. While at the riverine end of coastal estuaries, the predominate short-term response was a strong decline in salinity and phytoplankton suggesting these impacts were initially dominated by advection. The more intermediate coastal water-bodies generally experienced declines in salinity, significant reductions in water clarity, plus significant increases in nutrient concentrations and phytoplankton abundance. These intermediate waters typically developed dinoflagellate, diatom or cryptophyte blooms that elevated phytoplankton biomass for 1-3 months following a TC.

Tropical cyclone impacts on seagrass-associated fishes in a temperate-subtropical estuary

Major storms can alter coastal ecosystems in several direct and indirect ways including habitat destruction, stormwater-related water quality degradation, and organism mortality. From 2010–2020, ten tropical cyclones impacted coastal North Carolina, providing an opportunity to explore ecosystem responses across multiple storms. Using monthly trawl and contemporaneous seagrass surveys conducted in Back Sound, NC, we evaluated how cyclones may affect the nursery role of shallow-water biogenic habitats by examining seagrass-associated fish responses within a temperate-subtropical estuary. We employed a general before-after-control-impact approach using trawls conducted prior (before) and subsequent (after) to storm arrival and years either without (control) or with (impact) storms. We examined whether effects were apparent over short (within ~three weeks of impact) and seasonal (May-October) timescales, as well as if the magnitude of storm-related shifts varied as a function of storm intensity. Our findings suggest that the ability of these shallow-water habitats to support juvenile fishes was not dramatically altered by hurricanes. The resilience exhibited by fishes was likely underpinned by the relative persistence of the seagrass habitat, which appeared principally undamaged by storms based upon review of available–albeit limited seagrass surveys. Increasing cyclone intensity, however, was correlated with greater declines in catch and may potentially underlie the emigration and return rate of fish after cyclones. Whether estuarine fishes will continue to be resilient to acute storm impacts despite chronic environmental degradation and predicted increases major tropical cyclone frequency and intensity remains a pressing question.

News media and fisheries-independent data reveal hidden impacts of hurricanes

Climate change will likely intensify hurricane activity in coastal regions. A thorough understanding of hurricane impacts to marine fauna is necessary to prepare for and mitigate potential impacts to social systems dependent upon adjacent fauna. Yet, research attention, conservation funding, and policy all can be biased toward taxa of societal interest, potentially favoring a limited understanding of hurricane impacts. Here, we analyzed the frequency of mentions of taxa in newspaper articles in relation to hurricane activity at three coastal US locations coupled with analysis of long-term fisheries-independent data. While economically important taxa dominate media discourse, we observed long-term hurricane-related abundance declines in ecologically important taxa having little direct human utility. We conclude that there is a potential for research and policy biases related to hurricane impacts. Preparation and mitigation efforts will benefit from researchers and managers making directed efforts to identify and incorporate hurricane sensitive taxa into their work.

Patterns of association and distribution of estuarine-resident common bottlenose dolphins (Tursiops truncatus) in North Carolina, USA

The social structure of estuarine-resident bottlenose dolphins is complex and varied. Residing in habitats often utilized for resource exploitation, dolphins are at risk due to anthropogenic pressures while still federally protected. Effective conservation is predicated upon accurate abundance estimates. In North Carolina, two estuarine-resident stocks (demographically independent groups) of common bottlenose dolphin have been designated using spatiotemporal criteria. Both stocks are subjected to bycatch in fishing gear. The southern North Carolina estuarine stock was estimated at <200 individuals from surveys in 2006, which is outdated per US guidelines. Thus, we conducted a new capture-mark-recapture survey in 2018, identifying 547 distinct individuals, about three times higher than the prior abundance estimate. We compared those individuals to our long-term photo-identification catalog (1995–2018, n = 2,423 individuals), matching 228 individuals. Of those 228, 65 were also included in the 2013 abundance estimate for the northern North Carolina estuarine stock. Using sighting histories for all individuals in the long-term catalog, we conducted a social network analysis, which is independent of a priori stock assignments. The three primary clusters identified were inconsistent with current stock designations and not defined by spatiotemporal distribution. All three clusters had sighting histories in the estuary and on the coast, however, that with the highest within-cluster associations appeared to use estuarine waters more often. The within-cluster association strength was low for one cluster, possibly due to only part of that cluster inhabiting the southern North Carolina estuarine system. Between-cluster differences occurred in infestation rates by the pseudostalked barnacle, Xenobalanus globicipitis, but that did not predict clusters. We suggest the need to re-evaluate the stock structure of estuarine-resident common bottlenose dolphins in North Carolina and currently have insufficient information to assign an abundance estimate to a currently designated stock.

Coastal Microbial Communities Disrupted During the 2018 Hurricane Season in Outer Banks, North Carolina

Hurricane frequencies and intensities are expected to increase under warming climate scenarios, increasing potential to disrupt microbial communities from steady-state conditions and alter ecosystem function. This study shows the impact of hurricane season on microbial community dynamics within the barrier island system of Outer Banks, North Carolina. We found that the passage of two sequential energetic hurricanes in 2018 (Florence and Michael) were correlated with shifts in total and active (DNA and RNA) portions of bacterial communities but not in archaeal communities, and within surface waters but not within the sediment. These microbial community shifts were distinct from non-hurricane season conditions, suggesting significant implications for nutrient cycling in nearshore and offshore environments. Hurricane-influenced marine sites in the coastal North Atlantic region had lower microbial community evenness and Shannon diversity, in addition to increased relative abundance of copiotrophic microbes compared to non-hurricane conditions. The abundance of functional genes associated with carbon and nitrogen cycling pathways were also correlated with the storm season, potentially shifting microbial communities at offshore sites from autotroph-dominated to heterotroph-dominated and leading to impacts on local carbon budgets. Understanding the geographic- and system-dependent responses of coastal microbial communities to extreme storm disturbances is critical for predicting impacts to nutrient cycling and ecosystem stability in current and future climate scenarios.

Dynamics of Restored and Natural Oyster Reefs After a Hurricane

Restoration of shellfish reefs has increased exponentially over the past two decades, due in part to increased awareness of widespread oyster habitat loss. Large-scale, acute disturbances such as hurricanes have the potential to influence restoration outcomes, but because storm occurrence is unpredictable with respect to restoration timelines, the responses of restored habitats are not well understood. We quantified the ecological dynamics of a newly constructed Crassostrea virginica oyster reef and nearby reference reef in a Texas estuary immediately after Hurricane Harvey, a major category 4 storm. Biophysical structure (e.g., oyster density, shell height, sediment grain size), and community composition (abundance of reef-associated epifauna, and nearby infauna) were measured for 18 months. A sharp decrease in salinity and temporary deposition of fine sediments within the first 3 months corresponded with increases in oyster and epifaunal recruitment on the restored reef, although densities were generally below those measured on restored reefs without hurricanes. Criteria for oyster reef restoration success were met within 12–18 months post-storm. Infaunal densities decreased but returned to pre-storm densities within 2 months, but bivalves were delayed, returning to pre-storm levels after 9 months. A lack of historical baseline data on the newly restored reef limited our ability to assess the magnitude of reef recovery to pre-disturbance levels or separate the direct effects of the hurricane from the dynamics of early recruitment and growth. Results provide important information about restored and natural oyster reef dynamics after large-scale disturbance and can help inform effective management and conservation measures.

Projecting the effects of land subsidence and sea level rise on storm surge flooding in Coastal North Carolina

Much of the United States Atlantic coastline continues to undergo subsidence due to post glacial settlement and ground water depletion. Combined with eustatic sea level rise (SLR), this contributes to an increased rate of relative SLR. In this work, we utilize the ADvanced CIRCulation model to project storm surges across coastal North Carolina. Recent hurricanes Irene and Matthew are simulated considering SLR and subsidence estimates for 2100. Relative to present day conditions, storm surge susceptible regions increase by 27% (Irene) to 40% (Matthew) due to subsidence. Combined with SLR (+ 74 cm), results suggest more than a doubling of areal flood extent for Irene and more than a three-fold increase for Hurricane Matthew. Considering current regional population distributions, this translates to an increase in at-risk populations of 18% to 61% due to subsidence. Even further, exposed populations are projected to swell relative to Matthew and Irene baseline simulations (8200 and 28,500) by more than 70,000 in all SLR scenarios (79,400 to 133,600). While increases in surge inundation are driven primarily by SLR in the region, there remains a substantial contribution due to vertical land movement. This outlines the importance of exploring spatially variable land movement in surge prediction, independent of SLR.

Do predators have a role to play in wetland ecosystem functioning? An experimental study in New England salt marshes

The historical ecological paradigm of wetland ecosystems emphasized the role of physical or "bottom-up" factors in maintaining functions and services. However, recent studies have shown that the loss of predators in coastal salt marshes can lead to a significant reduction in wetland extent due to overgrazing of vegetation by herbivores. Such studies indicate that consumers or "top-down" factors may play a much larger role in the maintenance of wetland ecosystems than was previously thought. The objective of this study was to evaluate whether altering top-down control by manipulating the presence of predators can lead to measurable changes in salt marsh ecosystem properties. Between May and August of 2015 and 2016, we established exclosure and enclosure cages within three New England coastal wetland areas and manipulated the presence of green crab predators to assess how they and their fiddler and purple marsh crab prey affect changes in ecosystem properties. Predator presence was associated with changes in soil nitrogen and aboveground biomass at two of the three field sites, though the magnitude and direction of these effects varied from site to site. Further, path analysis results indicate that across field sites, a combination of bottom-up and top-down factors influenced changes in measured variables. These results challenge the growing consensus that consumers have strong effects, indicating instead that predator impacts may be highly context-dependent.

Landfall season is critical to the impact of a cyclone on a monsoon-regulated tropical coastal lagoon

Cyclones can produce a wide variety of short-term and long-term ecological impacts on coastal lagoons depending on cyclone's physical-meteorological characteristics and the lagoon's geographic, geomorphic, and bathymetric characteristics. Here, we theorized that in monsoon regulated tropical coastal lagoons, another important factor that could determine the impact of a cyclone is the landfall season or time of the year with reference to the monsoon season. We analyzed the impact of two cyclones which made landfall near Chilika, Asia's largest brackish water lagoon in different seasons, Cyclone Fani and Titli before and after the monsoon season. We compared field measured and satellite-derived water quality parameters including nutrient, salinity, water temperature, transparency, Chlorophyll-a (Chl-a), total suspended matter (TSM), and colored dissolved organic matter (CDOM) before and after the cyclones. We found that although both the cyclones were of similar intensities, after their land interaction, their impact on the lagoon's water quality was contrasting. The post-monsoon cyclone produced a substantial increase in total nitrogen (TN) and total phosphorous (TP), a large drop in salinity, CDOM, and Chl-a. In contrast, after the pre-monsoon cyclone, TN and TP did not show any such hike, no substantial change in salinity and CDOM either, and only a slight increase in Chl-a was observed. We found that the controlling factor in determining the impact of a cyclone is the rate and duration of freshwater discharge to the lagoon, which is normally a strong pulse for pre-monsoon and a continued high flow for post-monsoon cyclones. We conclude that the antecedent conditions of the lagoon and the watershed at the time of a cyclone's landfall is a key criterion in determining the impact. The combined use of satellite data and field data was proved critical to capture the overall impact of cyclones on the hydrological characteristics of the monsoon-regulated coastal lagoon.

Extreme storms cause rapid but short-lived shifts in nearshore subtropical bacterial communities

Climate change scenarios predict tropical cyclones will increase in both frequency and intensity, which will escalate the amount of terrestrial run-off and mechanical disruption affecting coastal ecosystems. Bacteria are key contributors to ecosystem functioning, but relatively little is known about how they respond to extreme storm events, particularly in nearshore subtropical regions. In this study, we combine field observations and mesocosm experiments to assess bacterial community dynamics and changes in physicochemical properties during early- and late-season tropical cyclones affecting Okinawa, Japan. Storms caused large and fast influxes of freshwater and terrestrial sediment - locally known as red soil pollution - and caused moderate increases of macronutrients, especially SiO₂ and PO₄ ^3-, with up to 25 and 0.5 μM respectively. We detected shifts in relative abundances of marine and terrestrially derived bacteria, including putative coral and human pathogens, during storm events. Soil input alone did not substantially affect marine bacterial communities in mesocosms, indicating that other components of run-off or other storm effects likely exert a larger influence on bacterial communities. The storm effects were short-lived and bacterial communities quickly recovered following both storm events. The early- and late-season storms caused different physicochemical and bacterial community changes, demonstrating the context-dependency of extreme storm responses in a subtropical coastal ecosystem.

Cyanobacterial bloom expansion caused by typhoon disturbance in Lake Taihu China

It remains unclear why the area of a cyanobacterial bloom increases in a shallow lake after a typhoon passes. In this study, the mechanisms of cyanobacterial bloom expansion were investigated by studying meteorological factors, water quality, algal biomass, and bloom area in Lake Taihu before and after typhoons (2007-2016). Our results showed that typhoon-induced sediment resuspension caused a short-term increase in nutrients, but nutrients returned to pre-typhoon levels after the typhoon passages. The short-term nutrient release during a typhoon did not result in an obvious increase in Microcystis cell density in two bays of Lake Taihu (Gonghu and Meiliang). Under strong winds, Microcystis aggregates were uniformly distributed in the water column downwind and then dispersed into different directions by wind-driven currents. In particular, Microcystis in the surface water were transported to the center of Lake Taihu. After a typhoon, dispersed Microcystis refloated and formed blooms. Thus, the bloom area was enlarged compared with before a typhoon. Several days after a typhoon, the bloom area gradually reduced as a result of a steady breeze on the horizontal accumulation of Microcystis.

Effects of cyclone Fani on the copepod community of the Ganges River estuary of India

A cyclone temporarily disrupts copepod community structure of an estuary, and during the community rebuilding process, omnivorous copepods dominate. This hypothesis was tested after cyclone Fani affected the Ganges River estuary of India on 5 May 2019. Copepod assemblages and environmental parameters were collected before (25 February 2019), after (24 August 2019) and immediately after (daily between 8 and 14 May 2019) cyclone Fani from three sites of the estuary. Immediately after cyclone Fani, spatial heterogeneity of the estuarine environment was washed away, salinity and temperature levels of the estuary increased, pH level declined, while the total dissolve solids remained constant at high levels of concentration. Copepod diversity and abundance were drastically reduced by cyclone Fani with the exception of the omnivorous Bestiolina similis, which tolerated a wide variability of the environment and dominated the community. Led by small and medium-sized copepods, within days, the community recovered from its initial disruption. Immediately after cyclone Fani, medium-sized omnivorous copepod Acartiella tortaniformis became the second most abundant species replacing the small-sized herbivorous Paracalanus parvus. Changes in species composition and abundance hierarchy observed immediately after cyclone Fani lasted for a few months. The intensity of cyclones is increasing in the Indian Sundarban; therefore, following a cyclone, more severe and prolong disruptions of the copepod community are likely. Institutionalized monitoring of the cyclone-mediated ecological changes of the Ganges River estuary is therefore strongly recommended.

Tropical Cyclone Landfall Frequency and Large-Scale Environmental Impacts along Karstic Coastal Regions (Yucatan Peninsula, Mexico)

Tropical cyclones (TCs) are natural systems that develop over ocean basins and are key components of the atmospheric activity during the warm season. However, there are still knowledge gaps about the combined positive and negative TC impacts on the structure and function of coastal socio-ecosystems. Using remote sensing tools, we analyzed the frequency, trajectory, and intensity of 1894 TCs from 1851–2019 to identify vulnerable “hotspots” across the Yucatan Peninsula (YP), Mexico. A total of 151 events hit the YP, with 96% of landings on the eastern coast. We focused on three major hurricanes (Emily and Wilma, 2005; Dean, 2007) and one tropical storm (Stan, 2005) to determine the impacts on cumulative precipitation, vegetation change, and coastal phytoplankton (Chl-a) distribution across the YP. Despite a short inland incursion, Wilma’s environmental damage was coupled to strong winds (157–241 km/h), slow motion (4–9 km/h), and heavy precipitation (up to 770 mm). Because of an extensive footprint, Wilma caused more vegetation damage (29%) than Dean (20%), Emily (7%), and Stan (2%). All TCs caused a Chl-a increase associated to submarine discharge and upwelling off the peninsula coastlines. Disaster risk along the coast underscores negative economic impacts and positive ecological benefits at the regional scale.

Hurricane Disturbance Stimulated Nitrification and Altered Ammonia Oxidizer Community Structure in Lake Okeechobee and St. Lucie Estuary (Florida)

Nitrification is an important biological link between oxidized and reduced forms of nitrogen (N). The efficiency of nitrification plays a key role in mitigating excess N in eutrophic systems, including those with cyanobacterial harmful algal blooms (cyanoHABs), since it can be closely coupled with denitrification and removal of excess N. Recent work suggests that competition for ammonium (NH₄⁺) between ammonia oxidizers and cyanoHABs can help determine microbial community structure. Nitrification rates and ammonia-oxidizing archaeal (AOA) and bacterial (AOB) community composition and gene abundances were quantified in Lake Okeechobee and St. Lucie Estuary in southern Florida (United States). We sampled during cyanobacterial (Microcystis) blooms in July 2016 and August 2017 (2 weeks before Hurricane Irma) and 10 days after Hurricane Irma made landfall. Nitrification rates were low during cyanobacterial blooms in Lake Okeechobee and St. Lucie Estuary, while low bloom conditions in St. Lucie Estuary coincided with greater nitrification rates. Nitrification rates in the lake were correlated (R² = 0.94; p = 0.006) with AOA amoA abundance. Following the hurricane, nitrification rates increased by an order of magnitude, suggesting that nitrifiers outcompeted cyanobacteria for NH₄⁺ under turbid, poor light conditions. After Irma, AOA and AOB abundances increased in St. Lucie Estuary, while only AOB increased in Lake Okeechobee. AOA sequences clustered into three major lineages: Nitrosopumilales (NP), Nitrososphaerales (NS), and Nitrosotaleales (NT). Many of the lake OTUs placed within the uncultured and uncharacterized NS δ and NT β clades, suggesting that these taxa are ecologically important along this eutrophic, lacustrine to estuarine continuum. After the hurricane, the AOA community shifted toward dominance by freshwater clades in St. Lucie Estuary and terrestrial genera in Lake Okeechobee, likely due to high rainfall and subsequent increased turbidity and freshwater loading from the lake into the estuary. AOB community structure was not affected by the disturbance. AOA communities were consistently more diverse than AOB, despite fewer sequences recovered, including new, unclassified, eutrophic ecotypes, suggesting a wider ecological biogeography than the oligotrophic niche originally posited. These results and other recent reports contradict the early hypothesis that AOB dominate ammonia oxidation in high-nutrient or terrestrial-influenced systems.

Massive pollutants released to Galveston Bay during Hurricane Harvey: Understanding their retention and pathway using Lagrangian numerical simulations

Increasing frequency of extreme precipitation events under the future warming climate makes the storm-related pollutant release more and more threatening to coastal ecosystems. Hurricane Harvey, a 1000-year extreme precipitation event, caused massive pollutant release from the Houston metropolitan area to the adjacent Galveston Bay. 0.57 × 10⁶ tons of raw sewage and 22,000 barrels of oil, refined fuels and chemicals were reportly released during Harvey, which would likely deteriorate the water quality and damage the coastal ecosystem. Using a Lagrangian particle-tracking method coupled with a validated 3D hydrodynamic model, we examined the retention, pathway, and fate of the released pollutants. A new timescale, local exposure time (LET), is introduced to quantitatively evaluate the spatially varying susceptibility inside the bay and over the shelf, with a larger LET indicating the region is more susceptible to the released pollutants. We found LET inside the bay is at least one order of magnitude larger for post-storm release than storm release due to a quick recovery in the system's flushing. More than 90% of pollutants released during the storm exited the bay within two days, while those released after the storm could stay inside the bay for up to three months. This implies that post-storm release is potentially more damaging to water quality and ecosystem health. Our results suggest that not only the amount of total pollutant load but also the release timing should be considered when assessing a storm's environmental and ecological influence, because there could be large amounts of pollutants steadily and slowly discharged after storm through groundwater, sewage systems, and reservoirs.

Dramatic hydrodynamic and sedimentary responses in Galveston Bay and adjacent inner shelf to Hurricane Harvey

Hurricane Harvey, one of the worst hurricanes that hit the United States in recent history, poured record-breaking rainfall across the Houston metropolitan area. Based on a comprehensive set of data from various sources, we examined the dramatic responses in hydrodynamic and sedimentary processes of Galveston Bay to this extreme event. Using a freshwater fraction method that circumvents the uncertainties in surface runoff and groundwater discharge, the freshwater load into the bay during Harvey and the following month was estimated to be 11.1 × 10⁹ m³, about 3 times the bay volume, which had completely refreshed the entire bay. Harvey also delivered 9.86 × 10⁷ metric tons of sediment into the bay, equivalent to 18 years of average annual sediment load. At a site inside the San Jacinto Estuary, acute bed erosion of 48 cm followed by deposition of 22 cm of new sediment was observed from the sediment cores. Slow salinity recovery (~2 month) and a thick flood deposit (~10.5 cm average over the entire bay) had likely impacted the ecosystem in the bay and the adjacent inner shelf. Estuaries with similar bathymetric and geometric characteristics, i.e., shallow bathymetry with narrow outlets, are expected to experience similar dramatic estuarine responses while extreme precipitation events are expected to occur more frequently under the warming climate.

Tropical storms influence the movement behavior of a demersal oceanic fish species

Extreme weather events strongly influence marine, freshwater, and estuarine ecosystems in myriad ways. We quantified movements of a demersal oceanic fish species (gray triggerfish Balistes capriscus; N = 30) before, during, and after two hurricanes in 2017 using fine-scale acoustic telemetry at a 37-m deep study site in North Carolina, USA. During storms, gray triggerfish movement and emigration rates were 100% and 2550% higher, respectively, than on days with no storms. We found that increased movement rates were much more strongly correlated with wave orbital velocity (i.e., wave-generated oscillatory flow at the seabed) than either barometric pressure or bottom water temperature, two covariates that have been demonstrated to be important for organisms in shallower water. Higher movement rates during storms were due to increased mobility at night, and emigrations typically occurred at night in the direction of deeper water. Overall, we found significant storm effects on the movement behavior of a demersal fish species in the open ocean, despite our study occurring in deeper water than previous studies that have examined storm effects on animal movement. We conclude that tropical storms are a driving force behind the structure of marine ecosystems, in part by influencing movements of mobile animals.

Contribution of hurricane-induced sediment resuspension to coastal oxygen dynamics

Hurricanes passing over the ocean can mix the water column down to great depths and resuspend massive volumes of sediments on the continental shelves. Consequently, organic carbon and reduced inorganic compounds associated with these sediments can be resuspended from anaerobic portions of the seabed and re-exposed to dissolved oxygen (DO) in the water column. This process can drive DO consumption as sediments become oxidized. Previous studies have investigated the effect of hurricanes on DO in different coastal regions of the world, highlighting the alleviation of hypoxic conditions by extreme winds, which drive vertical mixing and re-aeration of the water column. However, the effect of hurricane-induced resuspended sediments on DO has been neglected. Here, using a diverse suite of datasets for the northern Gulf of Mexico, we find that in the few days after a hurricane passage, decomposition of resuspended shelf sediments consumes up to a fifth of the DO added to the bottom of the water column during vertical mixing. Despite uncertainty in this value, we highlight the potential significance of this mechanism for DO dynamics. Overall, sediment resuspension likely occurs over all continental shelves affected by tropical cyclones, potentially impacting global cycles of marine DO and carbon.

Storms do not alter long-term watershed development influences on coastal water quality

A twelve year (2000-2011) study of three coastal lagoons in the Gulf of Mexico was conducted to assess the impacts of local watershed development and tropical storms on water quality. The lagoons have similar physical and hydrological characteristics, but differ substantially in the degree of watershed urban development and nutrient loading rates. In total the lagoons experienced 22 storm events during the period studied. Specifically, we examine (1) whether there are influences on water quality in the lagoons from watershed development, (2) whether there are influences on water quality in the lagoons from storm activity, and (3) whether water quality is affected to a greater degree by watershed development versus storm activity. The two urbanized lagoons typically showed higher water-column nitrate, dissolved organic nitrogen, and phosphate compared with the non-urbanized lagoon. One of the urbanized lagoons had higher water-column chlorophyll a concentrations than the other two lagoons on most sampling dates, and higher light extinction coefficients on some sampling dates. The non-urbanized lagoon had higher water-column dissolved oxygen concentrations than other lagoons on many sampling dates. Our results suggest long-term influences of watershed development on coastal water quality. We also found some evidence of significant storm effects on water quality, such as increased nitrate, phosphate, and dissolved oxygen, and decreased salinity and water temperature. However, the influences of watershed development on water quality were greater. These results suggest that changes in water quality induced by human watershed development pervade despite the storm effects. These findings may be useful for environmental management since they suggest that storms do not profoundly alter long-term changes in water quality that resulted from human development of watersheds.

Mixotrophy in the marine red-tide cryptophyte Teleaulax amphioxeia and ingestion and grazing impact of cryptophytes on natural populations of bacteria in Korean coastal waters

Cryptophytes are ubiquitous and one of the major phototrophic components in marine plankton communities. They often cause red tides in the waters of many countries. Understanding the bloom dynamics of cryptophytes is, therefore, of great importance. A critical step in this understanding is unveiling their trophic modes. Prior to this study, several freshwater cryptophyte species and marine Cryptomonas sp. and Geminifera cryophila were revealed to be mixotrophic. The trophic mode of the common marine cryptophyte species, Teleaulax amphioxeia has not been investigated yet. Thus, to explore the mixotrophic ability of T. amphioxeia by assessing the types of prey species that this species is able to feed on, the protoplasms of T. amphioxeia cells were carefully examined under an epifluorescence microscope and a transmission electron microscope after adding each of the diverse prey species. Furthermore, T. amphioxeia ingestion rates heterotrophic bacteria and the cyanobacterium Synechococcus sp. were measured as a function of prey concentration. Moreover, the feeding of natural populations of cryptophytes on natural populations of heterotrophic bacteria was assessed in Masan Bay in April 2006. This study reported for the first time, to our knowledge, that T. amphioxeia is a mixotrophic species. Among the prey organisms offered, T. amphioxeia fed only on heterotrophic bacteria and Synechococcus sp. The ingestion rates of T. amphioxeia on heterotrophic bacteria or Synechococcus sp. rapidly increased with increasing prey concentrations up to 8.6×10⁶ cells ml^-1, but slowly at higher prey concentrations. The maximum ingestion rates of T. amphioxeia on heterotrophic bacteria and Synechococcus sp. reached 0.7 and 0.3 cells predator^-1 h^-1, respectively. During the field experiments, the ingestion rates and grazing coefficients of cryptophytes on natural populations of heterotrophic bacteria were 0.3-8.3 cells predator^-1h^-1 and 0.012-0.033d^-1, respectively. Marine cryptophytes, including T. amphioxeia, are known to be favorite prey species for many mixotrophic and heterotrophic dinoflagellates and ciliates. Cryptophytes, therefore, likely play important roles in marine food webs and may exert a considerable potential grazing impact on the populations of marine bacteria.

Size effect on the mineralogy and chemistry of Mytilus trossulus shells from the southern Baltic Sea: implications for environmental monitoring

Mussels have the ability to control biomineral production and chemical composition, producing shells with a range of functions. In addition to biological control, the environment also seems to influence the process of biomineralization; thus, shells can be used as archives of ambient water parameters during the calcium carbonate deposition. Past and present environmental conditions are recorded in the shells in the form of various proxies including Mg/Ca or Sr/Ca ratios. For such proxies to be accurate and robust, the influence of biological effects including the size of studied organism must be examined and eliminated or minimized, so that the environmental signal can be efficiently extracted. This study considers mineralogy and elemental composition of shells representing four size classes of Mytilus trossulus from the Baltic Sea. Obtained results suggest that mineralogy and chemical composition change throughout the shell development due to most likely a combination of environmental and biological factors. The content of aragonite increases with increasing shell size, while the bulk concentrations of Na, Cd, Cu, U, V, Zn and Pb were found to decrease with increasing height of the shells. Therefore, using mussels for environmental monitoring requires analysis of individuals in the same size range.

Impacts of Typhoon Soudelor (2015) on the water quality of Taipei, Taiwan

Typhoon Soudelor was one of the strongest storms in the world in 2015. The category 5 hurricane made landfall in Taiwan on August 8, causing extensive damage and severe impacts on the environment. This paper describes the changes of trihalomethane (THM) concentrations in tap and drinking fountain water in selected typhoon-affected areas in Taipei before and after the typhoon. Samples were taken from water transmission mains at various distances from the local water treatment plant. The results showed that organic matter increased between pre- and post-typhoon periods with a greater proportion of aromatic compounds. Although drinking fountains showed moderately less total trihalomethane (TTHM) levels than that of tap water, the intake of high turbidity water considerably diminished the efficiency of their purification systems after the typhoon. The percentage distribution of THM species increased throughout the distribution network, probably due to a longer contact time between chlorine and the organic matter in the pipelines. After 2 to 5 min of boiling, THM reduction was considerable in all cases with the greater extent in post-typhoon samples. It is evident that extreme weather conditions may have a severe impact on water quality, and thus more cautious strategies should be adopted in such cases.

Interannual and cyclone-driven variability in phytoplankton communities of a tropical coastal lagoon

One of the main challenges in phytoplankton ecology is to understand their variability at different spatiotemporal scales. We investigated the interannual and cyclone-derived variability in phytoplankton communities of Chilika, the largest tropical coastal lagoon in Asia and the underlying mechanisms in relation to environmental forcing. Between July 2012 and June 2013, Cyanophyta were most prolific in freshwater northern region of the lagoon. A category-5 very severe cyclonic storm (VSCS) Phailin struck the lagoon on 12th October 2013 and introduced additional variability into the hydrology and phytoplankton communities. Freshwater Cyanophyta further expanded their territory and occupied the northern as well as central region of the lagoon. Satellite remote sensing imagery revealed that the phytoplankton biomass did not change much due to high turbidity prevailing in the lagoon after Phailin. Modeling analysis of species-salinity relationship identified specific responses of phytoplankton taxa to the different salinity regime of lagoon.

Hurricane activity and the large-scale pattern of spread of an invasive plant species

Disturbances are a primary facilitator of the growth and spread of invasive species. However, the effects of large-scale disturbances, such as hurricanes and tropical storms, on the broad geographic patterns of invasive species growth and spread have not been investigated. We used historical aerial imagery to determine the growth rate of invasive Phragmites australis patches in wetlands along the Atlantic and Gulf Coasts of the United States. These were relatively undisturbed wetlands where P. australis had room for unrestricted growth. Over the past several decades, invasive P. australis stands expanded in size by 6-35% per year. Based on tropical storm and hurricane activity over that same time period, we found that the frequency of hurricane-force winds explained 81% of the variation in P. australis growth over this broad geographic range. The expansion of P. australis stands was strongly and positively correlated with hurricane frequency. In light of the many climatic models that predict an increase in the frequency and intensity of hurricanes over the next century, these results suggest a strong link between climate change and species invasion and a challenging future ahead for the management of invasive species.

An 'extreme' future for estuaries? Effects of extreme climatic events on estuarine water quality and ecology

Recent climate observations suggest that extreme climatic events (ECE; droughts, floods, tropical cyclones, heat waves) have increased in frequency and/or intensity in certain world regions, consistent with climate model projections that account for man's influence on the global climate system. A synthesis of existing literature is presented and shows that ECE affect estuarine water quality by altering: (1) the delivery and processing of nutrients and organic matter, (2) physical-chemical properties of estuaries, and (3) ecosystem structure and function. From the standpoint of estuarine scientists and resource managers, a major scientific challenge will be to project the estuarine response to ECE that will co-occur with other important environmental changes (i.e., natural climate variability, global warming, sea level rise, eutrophication), as this will affect the provisioning of important ecosystem services provided by estuaries.

Ecosystem effects of a tropical cyclone on a network of lakes in northeastern North America

Here we document the regional effects of Tropical Cyclone Irene on thermal structure and ecosystem metabolism in nine lakes and reservoirs in northeastern North America using a network of high-frequency, in situ, automated sensors. Thermal stability declined within hours in all systems following passage of Irene, and the magnitude of change was related to the volume of water falling on the lake and catchment relative to lake volume. Across systems, temperature change predicted the change in primary production, but changes in mixed-layer thickness did not affect metabolism. Instead, respiration became a driver of ecosystem metabolism that was decoupled from in-lake primary production, likely due to addition of terrestrially derived carbon. Regionally, energetic disturbance of thermal structure was shorter-lived than disturbance from inflows of terrestrial materials. Given predicted regional increases in intense rain events with climate change, the magnitude and longevity of ecological impacts of these storms will be greater in systems with large catchments relative to lake volume, particularly when significant material is available for transport from the catchment. This case illustrates the power of automated sensor networks and associated human networks in assessing both system response and the characteristics that mediate physical and ecological responses to extreme events.

Effect of Cyclone Aila on estuarine fish assemblages in the Matla River of the Indian Sundarbans

The present study examined the effect of a catastrophic cyclone (Aila) on ichthyofaunal assemblages in a tidal river of the Sundarban Delta. Sampling in six stations with a gill-net of 20-m length and 1-cm mesh size resulted in the collection of 63 species in a pre-Aila survey. Among them, 16 species were not available in the year after the cyclone. However, 12 new species were added to the assemblages in the post-Aila year during which 59 species were recorded. Analysis of Similarity (ANOSIM) confirmed significant changes in fish assemblages after the cyclone with a corresponding reduction of the species diversity and variation in the seasonal pattern of abundance. Hydrological parameters also differed with a significant surge in nutrient concentrations. Tolerance to low dissolved oxygen seemed to be a determinant factor as evident from the higher abundance of certain fishes viz. Harpadon nehereus, Liza parsia, Pampus argentius, Tenualosa ilisha and Toxotes chatareus during post-Aila year. Despite the recovery of the ichthyofaunal assemblages at the later stage of the study, a strong seasonal variation was persistent. The study therefore suggests that environmental variation in terms of increasing temperature and salinity elicit greater response in an estuarine community than temporary natural disturbances even as severe as cyclones.

Effects of shelter and enrichment on the ecology and nutrient cycling of microbial communities of subtidal carbonate sediments

The interactions between physical disturbances and biogeochemical cycling are fundamental to ecology. The benthic microbial community controls the major pathway of nutrient recycling in most shallow-water ecosystems. This community is strongly influenced by physical forcing and nutrient inputs. Our study tests the hypotheses that benthic microbial communities respond to shelter and enrichment with (1) increased biomass, (2) change in community composition and (3) increased uptake of inorganic nutrients from the water column. Replicate in situ plots were sheltered from physical disturbance and enriched with inorganic nutrients or left without additional nutrients. At t(0) and after 10 days, sediment-water fluxes of nutrients, O(2) and N(2) , were measured, the community was characterized with biomarkers. Autochthonous benthic microalgal (BMA) biomass increased 30% with shelter and a natural fivefold increase in nutrient concentration; biomass did not increase with greater enrichment. Diatoms remained the dominant taxon of BMA, suggesting that the sediments were not N or Si limited. Bacteria and other heterotrophic organisms increased with enrichment and shelter. Daily exchanges of inorganic nutrients between sediments and the water column did not change in response to shelter or nutrient enrichment. In these sediments, physical disturbance, perhaps in conjunction with nutrient enrichment, was the primary determinant of microbial biomass.

Short-term hurricane impacts on a neotropical community of marked birds and implications for early-stage community resilience

Populations in fragmented ecosystems risk extirpation through natural disasters, which must be endured rather than avoided. Managing communities for resilience is thus critical, but details are sketchy about the capacity for resilience and its associated properties in vertebrate communities. We studied short-term resilience in a community of individually marked birds, following this community through the catastrophic destruction of its forest habitat by Hurricane Iris in Belize, Central America. We sampled for 58 d immediately before the storm, 28 d beginning 11 d after Hurricane Iris, and for 69 d approximately one year later. Our data showed that the initial capacity for resilience was strong. Many banded individuals remained after the storm, although lower post-hurricane recapture rates revealed increased turnover among individuals. Changes occurred in community dynamics and in abundances among species and guilds. Survivors and immigrants both were critical components of resilience, but in a heterogeneous, species-specific manner. Delayed effects, including higher fat storage and increased species losses, were evident one year later.

Measurement of water colour using AVIRIS imagery to assess the potential for an operational monitoring capability in the Pamlico Sound Estuary, USA

The monitoring of water colour parameters can provide an important diagnostic tool for the assessment of aquatic ecosystem condition. Remote sensing has long been used to effectively monitor chlorophyll concentrations in open ocean systems; however, operational monitoring in coastal and estuarine areas has been limited because of the inherent complexities of coastal systems, and the coarse spectral and spatial resolutions of available satellite systems. Data were collected using the National Aeronautics and Space Administration (NASA) Advanced Visible-Infrared Imaging Spectrometer (AVIRIS) flown at an altitude of approximately 20000 m to provide hyperspectral imagery and simulate both MEdium Resolution Imaging Spectrometer (MERIS) and Moderate Resolution Imaging Spectrometer (MODIS) data. AVIRIS data were atmospherically corrected using a radiative transfer modelling approach and analysed using band ratio and linear regression models. Regression analysis was performed with simultaneous field measurements data in the Neuse River Estuary (NRE) and Pamlico Sound on 15 May 2002. Chlorophyll a (Chl a) concentrations were optimally estimated using AVIRIS bands (9.5 nm) centred at 673.6 and 692.7 nm, resulting in a coefficient of determination (R² ) of 0.98. Concentrations of Chromophoric Dissolved Organic Matter (CDOM), Total Suspended Solids (TSS) and Fixed Suspended Solids (FSS) were also estimated, resulting in coefficients of determination of R²=0.90, 0.59 and 0.64, respectively. Ratios of AVIRIS bands centred at or near those corresponding to the MERIS and MODIS sensors indicated that relatively good satellite-based estimates could potentially be derived for water colour constituents at a spatial resolution of 300 and 500 m, respectively.