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Sun H, Shang H, Pan X, Li M. Structural insights into the assembly and energy transfer of the Lhcb9-dependent photosystem I from moss Physcomitrium patens. NATURE PLANTS 2023; 9:1347-1358. [PMID: 37474782 DOI: 10.1038/s41477-023-01463-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 06/21/2023] [Indexed: 07/22/2023]
Abstract
In plants and green algae, light-harvesting complexes I and II (LHCI and LHCII) constitute the antennae of photosystem I (PSI), thus effectively increasing the cross-section of the PSI core. The moss Physcomitrium patens (P. patens) represents a well-studied primary land-dwelling photosynthetic autotroph branching from the common ancestor of green algae and land plants at the early stage of evolution. P. patens possesses at least three types of PSI with different antenna sizes. The largest PSI form (PpPSI-L) exhibits a unique organization found neither in flowering plants nor in algae. Its formation is mediated by the P. patens-specific LHC protein, Lhcb9. While previous studies have revealed the overall architecture of PpPSI-L, its assembly details and the relationship between different PpPSI types remain unclear. Here we report the high-resolution structure of PpPSI-L. We identified 14 PSI core subunits, one Lhcb9, one phosphorylated LHCII trimer and eight LHCI monomers arranged as two belts. Our structural analysis established the essential role of Lhcb9 and the phosphorylated LHCII in stabilizing the complex. In addition, our results suggest that PpPSI switches between different types, which share identical modules. This feature may contribute to the dynamic adjustment of the light-harvesting capability of PSI under different light conditions.
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Affiliation(s)
- Haiyu Sun
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Hui Shang
- Beijing Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, College of Life Science, Capital Normal University, Beijing, China
| | - Xiaowei Pan
- Beijing Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, College of Life Science, Capital Normal University, Beijing, China.
| | - Mei Li
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
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2
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Yadav RM, Marriboina S, Zamal MY, Pandey J, Subramanyam R. High light-induced changes in whole-cell proteomic profile and its correlation with the organization of thylakoid super-complex in cyclic electron transport mutants of Chlamydomonas reinhardtii. FRONTIERS IN PLANT SCIENCE 2023; 14:1198474. [PMID: 37521924 PMCID: PMC10374432 DOI: 10.3389/fpls.2023.1198474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/01/2023] [Accepted: 05/11/2023] [Indexed: 08/01/2023]
Abstract
Light and nutrients are essential components of photosynthesis. Activating the signaling cascades is critical in starting adaptive processes in response to high light. In this study, we have used wild-type (WT), cyclic electron transport (CET) mutants like Proton Gradient Regulation (PGR) (PGRL1), and PGR5 to elucidate the actual role in regulation and assembly of photosynthetic pigment-protein complexes under high light. Here, we have correlated the biophysical, biochemical, and proteomic approaches to understand the targeted proteins and the organization of thylakoid pigment-protein complexes in the photoacclimation. The proteomic analysis showed that 320 proteins were significantly affected under high light compared to the control and are mainly involved in the photosynthetic electron transport chain, protein synthesis, metabolic process, glycolysis, and proteins involved in cytoskeleton assembly. Additionally, we observed that the cytochrome (Cyt) b6 expression is increased in the pgr5 mutant to regulate proton motive force and ATPase across the thylakoid membrane. The increased Cyt b6 function in pgr5 could be due to the compromised function of chloroplast (cp) ATP synthase subunits for energy generation and photoprotection under high light. Moreover, our proteome data show that the photosystem subunit II (PSBS) protein isoforms (PSBS1 and PSBS2) expressed more than the Light-Harvesting Complex Stress-Related (LHCSR) protein in pgr5 compared to WT and pgrl1 under high light. The immunoblot data shows the photosystem II proteins D1 and D2 accumulated more in pgrl1 and pgr5 than WT under high light. In high light, CP43 and CP47 showed a reduced amount in pgr5 under high light due to changes in chlorophyll and carotenoid content around the PSII protein, which coordinates as a cofactor for efficient energy transfer from the light-harvesting antenna to the photosystem core. BN-PAGE and circular dichroism studies indicate changes in macromolecular assembly and thylakoid super-complexes destacking in pgrl1 and pgr5 due to changes in the pigment-protein complexes under high light. Based on this study, we emphasize that this is an excellent aid in understanding the role of CET mutants in thylakoid protein abundances and super-complex organization under high light.
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Bos PR, Schiphorst C, Kercher I, Buis S, de Jong D, Vunderink I, Wientjes E. Spectral diversity of photosystem I from flowering plants. PHOTOSYNTHESIS RESEARCH 2023; 155:35-47. [PMID: 36260271 PMCID: PMC9792416 DOI: 10.1007/s11120-022-00971-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Accepted: 09/30/2022] [Indexed: 06/16/2023]
Abstract
Photosystem I and II (PSI and PSII) work together to convert solar energy into chemical energy. Whilst a lot of research has been done to unravel variability of PSII fluorescence in response to biotic and abiotic factors, the contribution of PSI to in vivo fluorescence measurements has often been neglected or considered to be constant. Furthermore, little is known about how the absorption and emission properties of PSI from different plant species differ. In this study, we have isolated PSI from five plant species and compared their characteristics using a combination of optical and biochemical techniques. Differences have been identified in the fluorescence emission spectra and at the protein level, whereas the absorption spectra were virtually the same in all cases. In addition, the emission spectrum of PSI depends on temperature over a physiologically relevant range from 280 to 298 K. Combined, our data show a critical comparison of the absorption and emission properties of PSI from various plant species.
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Affiliation(s)
- Peter R Bos
- Laboratory of Biophysics, Wageningen University, P.O. Box 8128, 6700 ET, Wageningen, The Netherlands
| | - Christo Schiphorst
- Laboratory of Biophysics, Wageningen University, P.O. Box 8128, 6700 ET, Wageningen, The Netherlands
| | - Ian Kercher
- Laboratory of Biophysics, Wageningen University, P.O. Box 8128, 6700 ET, Wageningen, The Netherlands
| | - Sieka Buis
- Laboratory of Biophysics, Wageningen University, P.O. Box 8128, 6700 ET, Wageningen, The Netherlands
| | - Djanick de Jong
- Laboratory of Biophysics, Wageningen University, P.O. Box 8128, 6700 ET, Wageningen, The Netherlands
| | - Igor Vunderink
- Laboratory of Biophysics, Wageningen University, P.O. Box 8128, 6700 ET, Wageningen, The Netherlands
| | - Emilie Wientjes
- Laboratory of Biophysics, Wageningen University, P.O. Box 8128, 6700 ET, Wageningen, The Netherlands.
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4
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Joaquín-Ovalle FM, Guihurt G, Barcelo-Bovea V, Hani-Saba A, Fontanet-Gómez NC, Ramirez-Paz J, Kashino Y, Torres-Martinez Z, Doble-Cacho K, Delinois LJ, Delgado Y, Griebenow K. Oxidative Stress- and Autophagy-Inducing Effects of PSI-LHCI from Botryococcus braunii in Breast Cancer Cells. BIOTECH 2022; 11:9. [PMID: 35822782 PMCID: PMC9264392 DOI: 10.3390/biotech11020009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 03/19/2022] [Accepted: 03/28/2022] [Indexed: 11/24/2022] Open
Abstract
Botryococcus braunii (B. braunii) is a green microalga primarily found in freshwater, reservoirs, and ponds. Photosynthetic pigments from algae have shown many bioactive molecules with therapeutic potential. Herein, we report the purification, characterization, and anticancer properties of photosystem I light-harvesting complex I (PSI-LHCI) from the green microalga B. braunii UTEX2441. The pigment-protein complex was purified by sucrose density gradient and characterized by its distinctive peaks using absorption, low-temperature (77 K) fluorescence, and circular dichroism (CD) spectroscopic analyses. Protein complexes were resolved by blue native-PAGE and two-dimensional SDS-PAGE. Triple-negative breast cancer MDA-MB-231 cells were incubated with PSI-LHCI for all of our experiments. Cell viability was assessed, revealing a significant reduction in a time- and concentration-dependent manner. We confirmed the internalization of PSI-LHCI within the cytoplasm and nucleus after 12 h of incubation. Cell death mechanism by oxidative stress was confirmed by the production of reactive oxygen species (ROS) and specifically superoxide. Furthermore, we monitored autophagic flux, apoptotic and necrotic features after treatment with PSI-LHCI. Treated MDA-MB-231 cells showed positive autophagy signals in the cytoplasm and nucleus, and necrotic morphology by the permeabilization of the cell membrane. Our findings demonstrated for the first time the cytotoxic properties of B. braunii PSI-LHCI by the induction of ROS and autophagy in breast cancer cells.
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Affiliation(s)
- Freisa M. Joaquín-Ovalle
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
| | - Grace Guihurt
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
| | - Vanessa Barcelo-Bovea
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
| | - Andraous Hani-Saba
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
| | - Nicole C. Fontanet-Gómez
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
| | - Josell Ramirez-Paz
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
| | - Yasuhiro Kashino
- Graduate School of Science, University of Hyogo, Kobe 678-1297, Japan;
| | - Zally Torres-Martinez
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
| | - Katerina Doble-Cacho
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
| | - Louis J. Delinois
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
| | - Yamixa Delgado
- Biochemistry & Pharmacology Department, San Juan Bautista School of Medicine, Caguas 00725, Puerto Rico
| | - Kai Griebenow
- Department of Chemistry, University of Puerto Rico, Río Piedras Campus, San Juan 00925, Puerto Rico; (F.M.J.-O.); (G.G.); (V.B.-B.); (A.H.-S.); (N.C.F.-G.); (J.R.-P.); (Z.T.-M.); (K.D.-C.); (L.J.D.)
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5
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van den Berg TE, Croce R. The Loroxanthin Cycle: A New Type of Xanthophyll Cycle in Green Algae (Chlorophyta). FRONTIERS IN PLANT SCIENCE 2022; 13:797294. [PMID: 35251077 PMCID: PMC8891138 DOI: 10.3389/fpls.2022.797294] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Accepted: 01/18/2022] [Indexed: 06/14/2023]
Abstract
Xanthophyll cycles (XC) have proven to be major contributors to photoacclimation for many organisms. This work describes a light-driven XC operating in the chlorophyte Chlamydomonas reinhardtii and involving the xanthophylls Lutein (L) and Loroxanthin (Lo). Pigments were quantified during a switch from high to low light (LL) and at different time points from cells grown in Day/Night cycle. Trimeric LHCII was purified from cells acclimated to high or LL and their pigment content and spectroscopic properties were characterized. The Lo/(L + Lo) ratio in the cells varies by a factor of 10 between cells grown in low or high light (HL) leading to a change in the Lo/(L + Lo) ratio in trimeric LHCII from .5 in low light to .07 in HL. Trimeric LhcbMs binding Loroxanthin have 5 ± 1% higher excitation energy (EE) transfer (EET) from carotenoid to Chlorophyll as well as higher thermo- and photostability than trimeric LhcbMs that only bind Lutein. The Loroxanthin cycle operates on long time scales (hours to days) and likely evolved as a shade adaptation. It has many similarities with the Lutein-epoxide - Lutein cycle (LLx) of plants.
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Bai T, Guo L, Xu M, Tian L. Structural Diversity of Photosystem I and Its Light-Harvesting System in Eukaryotic Algae and Plants. FRONTIERS IN PLANT SCIENCE 2021; 12:781035. [PMID: 34917114 PMCID: PMC8669154 DOI: 10.3389/fpls.2021.781035] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/22/2021] [Accepted: 11/08/2021] [Indexed: 06/14/2023]
Abstract
Photosystem I (PSI) is one of the most efficient photoelectric apparatus in nature, converting solar energy into condensed chemical energy with almost 100% quantum efficiency. The ability of PSI to attain such high conversion efficiency depends on the precise spatial arrangement of its protein subunits and binding cofactors. The PSI structures of oxygenic photosynthetic organisms, namely cyanobacteria, eukaryotic algae, and plants, have undergone great variation during their evolution, especially in eukaryotic algae and vascular plants for which light-harvesting complexes (LHCI) developed that surround the PSI core complex. A detailed understanding of the functional and structural properties of this PSI-LHCI is not only an important foundation for understanding the evolution of photosynthetic organisms but is also useful for designing future artificial photochemical devices. Recently, the structures of such PSI-LHCI supercomplexes from red alga, green alga, diatoms, and plants were determined by X-ray crystallography and single-particle cryo-electron microscopy (cryo-EM). These findings provide new insights into the various structural adjustments of PSI, especially with respect to the diversity of peripheral antenna systems arising via evolutionary processes. Here, we review the structural details of the PSI tetramer in cyanobacteria and the PSI-LHCI and PSI-LHCI-LHCII supercomplexes from different algae and plants, and then discuss the diversity of PSI-LHCI in oxygenic photosynthesis organisms.
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Affiliation(s)
| | | | | | - Lirong Tian
- Ministry of Education Key Laboratory of Molecular and Cellular Biology, Hebei Collaboration Innovation Center for Cell Signaling and Environmental Adaptation, Hebei Key Laboratory of Molecular and Cellular Biology, College of Life Sciences, Hebei Normal University, Shijiazhuang, China
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7
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Rantala M, Rantala S, Aro EM. Composition, phosphorylation and dynamic organization of photosynthetic protein complexes in plant thylakoid membrane. Photochem Photobiol Sci 2021; 19:604-619. [PMID: 32297616 DOI: 10.1039/d0pp00025f] [Citation(s) in RCA: 35] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
The photosystems (PS), catalyzing the photosynthetic reactions of higher plants, are unevenly distributed in the thylakoid membrane: PSII, together with its light harvesting complex (LHC)II, is enriched in the appressed grana stacks, while PSI-LHCI resides in the non-appressed stroma thylakoids, which wind around the grana stacks. The two photosystems interact in a third membrane domain, the grana margins, which connect the grana and stroma thylakoids and allow the loosely bound LHCII to serve as an additional antenna for PSI. The light harvesting is balanced by reversible phosphorylation of LHCII proteins. Nevertheless, light energy also damages PSII and the repair process is regulated by reversible phosphorylation of PSII core proteins. Here, we discuss the detailed composition and organization of PSII-LHCII and PSI-LHCI (super)complexes in the thylakoid membrane of angiosperm chloroplasts and address the role of thylakoid protein phosphorylation in dynamics of the entire protein complex network of the photosynthetic membrane. Finally, we scrutinize the phosphorylation-dependent dynamics of the protein complexes in context of thylakoid ultrastructure and present a model on the reorganization of the entire thylakoid network in response to changes in thylakoid protein phosphorylation.
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Affiliation(s)
- Marjaana Rantala
- Molecular Plant Biology, Department of Biochemistry, University of Turku, FI-20520, Turku, Finland
| | - Sanna Rantala
- Molecular Plant Biology, Department of Biochemistry, University of Turku, FI-20520, Turku, Finland
| | - Eva-Mari Aro
- Molecular Plant Biology, Department of Biochemistry, University of Turku, FI-20520, Turku, Finland.
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8
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van den Berg TE, Arshad R, Nawrocki WJ, Boekema EJ, Kouřil R, Croce R. PSI of the Colonial Alga Botryococcus braunii Has an Unusually Large Antenna Size. PLANT PHYSIOLOGY 2020; 184:2040-2051. [PMID: 33051267 PMCID: PMC7723122 DOI: 10.1104/pp.20.00823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Accepted: 09/28/2020] [Indexed: 05/03/2023]
Abstract
PSI is an essential component of the photosynthetic apparatus of oxygenic photosynthesis. While most of its subunits are conserved, recent data have shown that the arrangement of the light-harvesting complexes I (LHCIs) differs substantially in different organisms. Here we studied the PSI-LHCI supercomplex of Botryococccus braunii, a colonial green alga with potential for lipid and sugar production, using functional analysis and single-particle electron microscopy of the isolated PSI-LHCI supercomplexes complemented by time-resolved fluorescence spectroscopy in vivo. We established that the largest purified PSI-LHCI supercomplex contains 10 LHCIs (∼240 chlorophylls). However, electron microscopy showed heterogeneity in the particles and a total of 13 unique binding sites for the LHCIs around the PSI core. Time-resolved fluorescence spectroscopy indicated that the PSI antenna size in vivo is even larger than that of the purified complex. Based on the comparison of the known PSI structures, we propose that PSI in B. braunii can bind LHCIs at all known positions surrounding the core. This organization maximizes the antenna size while maintaining fast excitation energy transfer, and thus high trapping efficiency, within the complex.
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Affiliation(s)
- Tomas E van den Berg
- Biophysics of Photosynthesis, Department of Physics and Astronomy-Faculty of Science, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands
| | - Rameez Arshad
- Electron Microscopy Group, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, 9747 AG Groningen, The Netherlands
- Department of Biophysics, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, 783 71 Olomouc, Czech Republic
| | - Wojciech J Nawrocki
- Biophysics of Photosynthesis, Department of Physics and Astronomy-Faculty of Science, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands
| | - Egbert J Boekema
- Electron Microscopy Group, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Roman Kouřil
- Department of Biophysics, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, 783 71 Olomouc, Czech Republic
| | - Roberta Croce
- Biophysics of Photosynthesis, Department of Physics and Astronomy-Faculty of Science, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands
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Cariti F, Chazaux M, Lefebvre-Legendre L, Longoni P, Ghysels B, Johnson X, Goldschmidt-Clermont M. Regulation of Light Harvesting in Chlamydomonas reinhardtii Two Protein Phosphatases Are Involved in State Transitions. PLANT PHYSIOLOGY 2020; 183:1749-1764. [PMID: 32327546 PMCID: PMC7401111 DOI: 10.1104/pp.20.00384] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Accepted: 04/09/2020] [Indexed: 05/09/2023]
Abstract
Protein phosphorylation plays important roles in short-term regulation of photosynthetic electron transfer, and during state transitions, the kinase STATE TRANSITION7 (STT7) of Chlamydomonas reinhardtii phosphorylates components of light-harvesting antenna complex II (LHCII). This reversible phosphorylation governs the dynamic allocation of a part of LHCII to PSI or PSII, depending on light conditions and metabolic demands, but counteracting phosphatase(s) remain unknown in C. reinhardtii Here we analyzed state transitions in C. reinhardtii mutants of two phosphatases, PROTEIN PHOSPHATASE1 and PHOTOSYSTEM II PHOSPHATASE, which are homologous to proteins that antagonize the state transition kinases (STN7 and STN8) in Arabidopsis (Arabidopsis thaliana). The transition from state 2 to state 1 was retarded in pph1, and surprisingly also in pbcp However, both mutants eventually returned to state 1. In contrast, the double mutant pph1;pbcp appeared strongly locked in state 2. The complex phosphorylation patterns of the LHCII trimers and of the monomeric subunits were affected in the phosphatase mutants. Their analysis indicated that the two phosphatases have different yet overlapping sets of protein targets. The dual control of thylakoid protein dephosphorylation and the more complex antenna phosphorylation patterns in C. reinhardtii compared to Arabidopsis are discussed in the context of the stronger amplitude of state transitions and the more diverse LHCII isoforms in the alga.
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Affiliation(s)
- Federica Cariti
- Department of Botany and Plant Biology, University of Geneva, 1211, Geneva 4, Switzerland
| | - Marie Chazaux
- Aix Marseille University, Commissariat à l'Énergie Atomique et aux Énergies Alternatives, Centre National de la Recherche Scientifique, Biosciences and Biotechnologies Institute of Aix-Marseille, F-13108 Saint Paul-Lez-Durance, France
| | | | - Paolo Longoni
- Institute of Genetics and Genomics of Geneva, University of Geneva, 1205 Geneva 4, Switzerland
| | - Bart Ghysels
- Aix Marseille University, Commissariat à l'Énergie Atomique et aux Énergies Alternatives, Centre National de la Recherche Scientifique, Biosciences and Biotechnologies Institute of Aix-Marseille, F-13108 Saint Paul-Lez-Durance, France
| | - Xenie Johnson
- Aix Marseille University, Commissariat à l'Énergie Atomique et aux Énergies Alternatives, Centre National de la Recherche Scientifique, Biosciences and Biotechnologies Institute of Aix-Marseille, F-13108 Saint Paul-Lez-Durance, France
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10
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Kato H, Tokutsu R, Kubota-Kawai H, Burton-Smith RN, Kim E, Minagawa J. Characterization of a Giant PSI Supercomplex in the Symbiotic Dinoflagellate Symbiodiniaceae. PLANT PHYSIOLOGY 2020; 183:1725-1734. [PMID: 32546570 PMCID: PMC7401106 DOI: 10.1104/pp.20.00726] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 06/08/2020] [Indexed: 06/11/2023]
Abstract
Symbiodiniaceae are symbiotic dinoflagellates that provide photosynthetic products to corals. Because corals are distributed across a wide range of depths in the ocean, Symbiodiniaceae species must adapt to various light environments to optimize their photosynthetic performance. However, as few biochemical studies of Symbiodiniaceae photosystems have been reported, the molecular mechanisms of photoadaptation in this algal family remain poorly understood. Here, to investigate the photosynthetic machineries in Symbiodiniaceae, we purified and characterized the PSI supercomplex from the genome-sequenced Breviolum minutum (formerly Symbiodinium minutum). Mass spectrometry analysis revealed 25 light-harvesting complexes (LHCs), including both LHCF and LHCR families, from the purified PSI-LHC supercomplex. Single-particle electron microscopy showed unique giant supercomplex structures of PSI that were associated with the LHCs. Moreover, the PSI-LHC supercomplex contained a significant amount of the xanthophyll cycle pigment diadinoxanthin. Upon high light treatment, B. minutum cells showed increased nonphotochemical quenching, which was correlated with the conversion of diadinoxanthin to diatoxanthin, occurring preferentially in the PSI-LHC supercomplex. The possible role of PSI-LHC in photoprotection in Symbiodiniaceae is discussed.
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Affiliation(s)
- Hiroki Kato
- Division of Environmental Photobiology, National Institute for Basic Biology, Myodaiji, Okazaki 444-8585, Japan
- Department of Basic Biology, School of Life Science, Graduate University for Advanced Studies, SOKENDAI, Okazaki 444-8585, Japan
| | - Ryutaro Tokutsu
- Division of Environmental Photobiology, National Institute for Basic Biology, Myodaiji, Okazaki 444-8585, Japan
- Department of Basic Biology, School of Life Science, Graduate University for Advanced Studies, SOKENDAI, Okazaki 444-8585, Japan
| | - Hisako Kubota-Kawai
- Division of Environmental Photobiology, National Institute for Basic Biology, Myodaiji, Okazaki 444-8585, Japan
| | - Raymond N Burton-Smith
- Division of Environmental Photobiology, National Institute for Basic Biology, Myodaiji, Okazaki 444-8585, Japan
| | - Eunchul Kim
- Division of Environmental Photobiology, National Institute for Basic Biology, Myodaiji, Okazaki 444-8585, Japan
- Division of Biological Science, Graduate School of Science, Nagoya University, Chikusa, Nagoya 464-8602, Japan
| | - Jun Minagawa
- Division of Environmental Photobiology, National Institute for Basic Biology, Myodaiji, Okazaki 444-8585, Japan
- Department of Basic Biology, School of Life Science, Graduate University for Advanced Studies, SOKENDAI, Okazaki 444-8585, Japan
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11
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Caspy I, Malavath T, Klaiman D, Fadeeva M, Shkolnisky Y, Nelson N. Structure and energy transfer pathways of the Dunaliella Salina photosystem I supercomplex. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2020; 1861:148253. [PMID: 32569661 DOI: 10.1016/j.bbabio.2020.148253] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2020] [Revised: 06/14/2020] [Accepted: 06/15/2020] [Indexed: 12/30/2022]
Abstract
Oxygenic photosynthesis evolved more than 3 billion years ago in cyanobacteria. The increased complexity of photosystem I (PSI) became apparent from the high-resolution structures that were obtained for the complexes that were isolated from various organisms, ranging from cyanobacteria to plants. These complexes are all evolutionarily linked. In this paper, the researchers have uncovered the increased complexity of PSI in a single organism demonstrated by the coexistance of two distinct PSI compositions. The Large Dunaliella PSI contains eight additional subunits, six in PSI core and two light harvesting complexes. Two additional chlorophyll a molecules pertinent for efficient excitation energy transfer in state II transition were identified in PsaL and PsaO. Short distances between these newly identified chlorophylls correspond with fast excitation transfer rates previously reported during state II transition. The apparent PSI conformations could be a coping mechanism for the high salinity.
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Affiliation(s)
- Ido Caspy
- Department of Biochemistry and Molecular Biology, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
| | - Tirupathi Malavath
- Department of Biochemistry and Molecular Biology, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
| | - Daniel Klaiman
- Department of Biochemistry and Molecular Biology, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
| | - Maria Fadeeva
- Department of Biochemistry and Molecular Biology, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
| | - Yoel Shkolnisky
- School of Mathematical Sciences, Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 69978, Israel
| | - Nathan Nelson
- Department of Biochemistry and Molecular Biology, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel.
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12
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Ortiz-Torres MI, Fernández-Niño M, Cruz JC, Capasso A, Matteocci F, Patiño EJ, Hernández Y, González Barrios AF. Rational Design of Photo-Electrochemical Hybrid Devices Based on Graphene and Chlamydomonas reinhardtii Light-Harvesting Proteins. Sci Rep 2020; 10:3376. [PMID: 32099058 PMCID: PMC7042359 DOI: 10.1038/s41598-020-60408-5] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Accepted: 02/07/2020] [Indexed: 11/17/2022] Open
Abstract
Dye-sensitized solar cells (DSSCs) have been highlighted as the promising alternative to generate clean energy based on low pay-back time materials. These devices have been designed to mimic solar energy conversion processes from photosynthetic organisms (the most efficient energy transduction phenomenon observed in nature) with the aid of low-cost materials. Recently, light-harvesting complexes (LHC) have been proposed as potential dyes in DSSCs based on their higher light-absorption efficiencies as compared to synthetic dyes. In this work, photo-electrochemical hybrid devices were rationally designed by adding for the first time Leu and Lys tags to heterologously expressed light-harvesting proteins from Chlamydomonas reinhardtii, thus allowing their proper orientation and immobilization on graphene electrodes. The light-harvesting complex 4 from C. reinhardtii (LHC4) was initially expressed in Escherichia coli, purified via affinity chromatography and subsequently immobilized on plasma-treated thin-film graphene electrodes. A photocurrent density of 40.30 ± 9.26 μA/cm2 was measured on devices using liquid electrolytes supplemented with a phosphonated viologen to facilitate charge transfer. Our results suggest that a new family of graphene-based thin-film photovoltaic devices can be manufactured from rationally tagged LHC proteins and opens the possibility to further explore fundamental processes of energy transfer for biological components interfaced with synthetic materials.
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Affiliation(s)
- Martha I Ortiz-Torres
- Grupo de Diseño de Productos y Procesos (GDPP), Department of Chemical Engineering, Universidad de los Andes, Bogotá, 111711, Colombia
- Nanomaterials Laboratory, Physics Department, Universidad de Los Andes, Bogotá, 111711, Colombia
| | - Miguel Fernández-Niño
- Grupo de Diseño de Productos y Procesos (GDPP), Department of Chemical Engineering, Universidad de los Andes, Bogotá, 111711, Colombia
| | - Juan C Cruz
- GINIB Research Group, Department of Biomedical Engineering, Universidad de Los Andes, Bogotá, 111711, Colombia
| | - Andrea Capasso
- International Iberian Nanotechnology Laboratory, 4715-330, Braga, Portugal
| | - Fabio Matteocci
- C.H.O.S.E - Centre for Hybrid and Organic Solar Energy, Department of Electronic Engineering, University of Rome Tor Vergata, Via del politecnico 1, Rome, 00133, Italy
| | - Edgar J Patiño
- Superconductivity and Nanodevices Laboratory, Physics Department, Universidad de Los Andes, Bogotá, 111711, Colombia
| | - Yenny Hernández
- Nanomaterials Laboratory, Physics Department, Universidad de Los Andes, Bogotá, 111711, Colombia.
| | - Andrés Fernando González Barrios
- Grupo de Diseño de Productos y Procesos (GDPP), Department of Chemical Engineering, Universidad de los Andes, Bogotá, 111711, Colombia.
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13
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Nagao R, Yokono M, Ueno Y, Shen JR, Akimoto S. Excitation-Energy Transfer and Quenching in Diatom PSI-FCPI upon P700 Cation Formation. J Phys Chem B 2020; 124:1481-1486. [DOI: 10.1021/acs.jpcb.0c00715] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Ryo Nagao
- Research Institute for Interdisciplinary Science and Graduate School of Natural Science and Technology, Okayama University, Okayama 700-8530, Japan
| | - Makio Yokono
- Innovation Center, Nippon Flour Mills Company Ltd., Atsugi 243-0041, Japan
| | - Yoshifumi Ueno
- Graduate School of Science, Kobe University, Kobe 657-8501, Japan
| | - Jian-Ren Shen
- Research Institute for Interdisciplinary Science and Graduate School of Natural Science and Technology, Okayama University, Okayama 700-8530, Japan
| | - Seiji Akimoto
- Graduate School of Science, Kobe University, Kobe 657-8501, Japan
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14
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Vecchi V, Barera S, Bassi R, Dall’Osto L. Potential and Challenges of Improving Photosynthesis in Algae. PLANTS 2020; 9:plants9010067. [PMID: 31947868 PMCID: PMC7020468 DOI: 10.3390/plants9010067] [Citation(s) in RCA: 44] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/28/2019] [Revised: 12/24/2019] [Accepted: 12/30/2019] [Indexed: 11/16/2022]
Abstract
Sunlight energy largely exceeds the energy required by anthropic activities, and therefore its exploitation represents a major target in the field of renewable energies. The interest in the mass cultivation of green microalgae has grown in the last decades, as algal biomass could be employed to cover a significant portion of global energy demand. Advantages of microalgal vs. plant biomass production include higher light-use efficiency, efficient carbon capture and the valorization of marginal lands and wastewaters. Realization of this potential requires a decrease of the current production costs, which can be obtained by increasing the productivity of the most common industrial strains, by the identification of factors limiting biomass yield, and by removing bottlenecks, namely through domestication strategies aimed to fill the gap between the theoretical and real productivity of algal cultures. In particular, the light-to-biomass conversion efficiency represents one of the major constraints for achieving a significant improvement of algal cell lines. This review outlines the molecular events of photosynthesis, which regulate the conversion of light into biomass, and discusses how these can be targeted to enhance productivity through mutagenesis, strain selection or genetic engineering. This review highlights the most recent results in the manipulation of the fundamental mechanisms of algal photosynthesis, which revealed that a significant yield enhancement is feasible. Moreover, metabolic engineering of microalgae, focused upon the development of renewable fuel biorefineries, has also drawn attention and resulted in efforts for enhancing productivity of oil or isoprenoids.
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Affiliation(s)
| | | | | | - Luca Dall’Osto
- Correspondence: ; Tel.: +39-045-8027806; Fax: +39-045-8027929
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15
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Cook G, Teufel A, Kalra I, Li W, Wang X, Priscu J, Morgan-Kiss R. The Antarctic psychrophiles Chlamydomonas spp. UWO241 and ICE-MDV exhibit differential restructuring of photosystem I in response to iron. PHOTOSYNTHESIS RESEARCH 2019; 141:209-228. [PMID: 30729447 DOI: 10.1007/s11120-019-00621-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Accepted: 01/25/2019] [Indexed: 06/09/2023]
Abstract
Chlamydomonas sp. UWO241 is a psychrophilic alga isolated from the deep photic zone of a perennially ice-covered Antarctic lake (east lobe Lake Bonney, ELB). Past studies have shown that C. sp. UWO241 exhibits constitutive downregulation of photosystem I (PSI) and high rates of PSI-associated cyclic electron flow (CEF). Iron levels in ELB are in the nanomolar range leading us to hypothesize that the unusual PSI phenotype of C. sp. UWO241 could be a response to chronic Fe-deficiency. We studied the impact of Fe availability in C. sp. UWO241, a mesophile, C. reinhardtii SAG11-32c, as well as a psychrophile isolated from the shallow photic zone of ELB, Chlamydomonas sp. ICE-MDV. Under Fe-deficiency, PsaA abundance and levels of photooxidizable P700 (ΔA820/A820) were reduced in both psychrophiles relative to the mesophile. Upon increasing Fe, C. sp. ICE-MDV and C. reinhardtii exhibited restoration of PSI function, while C. sp. UWO241 exhibited only moderate changes in PSI activity and lacked almost all LHCI proteins. Relative to Fe-excess conditions (200 µM Fe2+), C. sp. UWO241 grown in 18 µM Fe2+ exhibited downregulation of light harvesting and photosystem core proteins, as well as upregulation of a bestrophin-like anion channel protein and two CEF-associated proteins (NdsS, PGL1). Key enzymes of starch synthesis and shikimate biosynthesis were also upregulated. We conclude that in response to variable Fe availability, the psychrophile C. sp. UWO241 exhibits physiological plasticity which includes restructuring of the photochemical apparatus, increased PSI-associated CEF, and shifts in downstream carbon metabolism toward storage carbon and secondary stress metabolites.
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Affiliation(s)
- Greg Cook
- Department of Microbiology, Miami University, 700 E High St., 32 Pearson Hall, Oxford, OH, 45056, USA
| | - Amber Teufel
- Department of Microbiology, Miami University, 700 E High St., 32 Pearson Hall, Oxford, OH, 45056, USA
| | - Isha Kalra
- Department of Microbiology, Miami University, 700 E High St., 32 Pearson Hall, Oxford, OH, 45056, USA
| | - Wei Li
- Land Resources and Environmental Sciences, Montana State University, Bozeman, MT, USA
| | - Xin Wang
- Department of Microbiology, Miami University, 700 E High St., 32 Pearson Hall, Oxford, OH, 45056, USA
| | - John Priscu
- Land Resources and Environmental Sciences, Montana State University, Bozeman, MT, USA
| | - Rachael Morgan-Kiss
- Department of Microbiology, Miami University, 700 E High St., 32 Pearson Hall, Oxford, OH, 45056, USA.
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16
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Binding of ferredoxin NADP + oxidoreductase (FNR) to plant photosystem I. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2019; 1860:689-698. [PMID: 31336103 DOI: 10.1016/j.bbabio.2019.07.007] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 04/02/2019] [Revised: 07/11/2019] [Accepted: 07/18/2019] [Indexed: 12/17/2022]
Abstract
The binding of FNR to PSI has been postulated long ago, however, a clear evidence is still missing. In this work, using isothermal titration calorimetry (ITC), we found that FNR binds to photosystem I with its light harvesting complex I (PSI-LHCI) from C. reinhardtii with a 1:1 stoichiometry, a Kd of ~0.8 μM and ∆H of -20.7 kcal/mol. Titrations at different temperatures were used to determine the heat capacity change, ∆CP, of the binding, through which the size of the interface area between the proteins was assessed as ~3000 Å2. In a different set of ITC experiments, introduction of various sucrose concentrations was used to estimate that ~95 water molecules are released to the solvent. These observations support the notion of a binding site shared by few of the photosystem I - light harvesting complex I (PSI-LHCI) subunits in addition to PsaE. Based on these results, a hypothetical model was built for the binding site of FNR at PSI, using known crystallographic structures of: cyanobacterial PSI in complex with ferredoxin (Fd), plant PSI-LHCI and Fd:FNR complex from cyanobacteria. FNR binding site location is proposed to be at the foot of the stromal ridge and above the inner LHCI belt. It is expected to form contacts with PsaE, PsaB, PsaF and at least one of the LHCI. In addition, a ~4.5-fold increased affinity between FNR and PSI-LHCI under crowded 1 M sucrose environment led us to conclude that in C. reinhardtii FNR also functions as a subunit of PSI-LHCI.
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17
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Pan X, Cao P, Su X, Liu Z, Li M. Structural analysis and comparison of light-harvesting complexes I and II. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2019; 1861:148038. [PMID: 31229568 DOI: 10.1016/j.bbabio.2019.06.010] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Revised: 06/04/2019] [Accepted: 06/15/2019] [Indexed: 12/30/2022]
Abstract
Photosynthesis is a fundamental biological process involving the conversion of solar energy into chemical energy. The initial photochemical and photophysical events of photosynthesis are mediated by photosystem II (PSII) and photosystem I (PSI). Both PSII and PSI are multi-subunit supramolecular machineries composed of a core complex and a peripheral antenna system. The antenna system serves to capture light energy and transfer it to the core efficiently. Both PSII and PSI in the green lineage (plants and green algae) and PSI in red algae have an antenna system comprising a series of chlorophyll- and carotenoid-binding membrane proteins belonging to the light-harvesting complex (LHC) superfamily, including LHCII and LHCI. However, the antenna size and subunit composition vary considerably in the two photosystems from diverse organisms. On the basis of the plant and algal LHCII and LHCI structures that have been solved by X-ray crystallography and single-particle cryo-electron microscopy we review the detailed structural features and characteristic pigment properties of these LHCs in PSII and PSI. This article is part of a Special Issue entitled Light harvesting, edited by Dr. Roberta Croce.
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Affiliation(s)
- Xiaowei Pan
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, PR China
| | - Peng Cao
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, PR China
| | - Xiaodong Su
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, PR China
| | - Zhenfeng Liu
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, PR China; University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Mei Li
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, PR China.
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18
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Suga M, Ozawa SI, Yoshida-Motomura K, Akita F, Miyazaki N, Takahashi Y. Structure of the green algal photosystem I supercomplex with a decameric light-harvesting complex I. NATURE PLANTS 2019; 5:626-636. [PMID: 31182847 DOI: 10.1038/s41477-019-0438-4] [Citation(s) in RCA: 91] [Impact Index Per Article: 18.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2018] [Accepted: 05/02/2019] [Indexed: 05/05/2023]
Abstract
In plants and green algae, the core of photosystem I (PSI) is surrounded by a peripheral antenna system consisting of light-harvesting complex I (LHCI). Here we report the cryo-electron microscopic structure of the PSI-LHCI supercomplex from the green alga Chlamydomonas reinhardtii. The structure reveals that eight Lhca proteins form two tetrameric LHCI belts attached to the PsaF side while the other two Lhca proteins form an additional Lhca2/Lhca9 heterodimer attached to the opposite side. The spatial arrangement of light-harvesting pigments reveals that Chlorophylls b are more abundant in the outer LHCI belt than in the inner LHCI belt and are absent from the core, thereby providing the downhill energy transfer pathways to the PSI core. PSI-LHCI is complexed with a plastocyanin on the patch of lysine residues of PsaF at the luminal side. The assembly provides a structural basis for understanding the mechanism of light-harvesting, excitation energy transfer of the PSI-LHCI supercomplex and electron transfer with plastocyanin.
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Affiliation(s)
- Michihiro Suga
- Research Institute for Interdisciplinary Science, Okayama University, Okayama, Japan
- JST, PRESTO, Kawaguchi, Japan
| | - Shin-Ichiro Ozawa
- Research Institute for Interdisciplinary Science, Okayama University, Okayama, Japan
| | | | - Fusamichi Akita
- Research Institute for Interdisciplinary Science, Okayama University, Okayama, Japan
- JST, PRESTO, Kawaguchi, Japan
| | - Naoyuki Miyazaki
- Institute for Protein Research, Osaka University, Osaka, Japan.
- Life Science Center for Survival Dynamics, Tsukuba Advanced Research Alliance, University of Tsukuba, Tsukuba, Japan.
| | - Yuichiro Takahashi
- Research Institute for Interdisciplinary Science, Okayama University, Okayama, Japan.
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19
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Nawrocki W, Bailleul B, Cardol P, Rappaport F, Wollman FA, Joliot P. Maximal cyclic electron flow rate is independent of PGRL1 in Chlamydomonas. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2019; 1860:425-432. [DOI: 10.1016/j.bbabio.2019.01.004] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2018] [Revised: 12/08/2018] [Accepted: 01/25/2019] [Indexed: 11/30/2022]
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20
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Kuthanová Trsková E, Bína D, Santabarbara S, Sobotka R, Kaňa R, Belgio E. Isolation and characterization of CAC antenna proteins and photosystem I supercomplex from the cryptophytic alga Rhodomonas salina. PHYSIOLOGIA PLANTARUM 2019; 166:309-319. [PMID: 30677144 DOI: 10.1111/ppl.12928] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2019] [Accepted: 01/17/2019] [Indexed: 06/09/2023]
Abstract
In the present paper, we report an improved method combining sucrose density gradient with ion-exchange chromatography for the isolation of pure chlorophyll a/c antenna proteins from the model cryptophytic alga Rhodomonas salina. Antennas were used for in vitro quenching experiments in the absence of xanthophylls, showing that protein aggregation is a plausible mechanism behind non-photochemical quenching in R. salina. From sucrose gradient, it was also possible to purify a functional photosystem I supercomplex, which was in turn characterized by steady-state and time-resolved fluorescence spectroscopy. R. salina photosystem I showed a remarkably fast photochemical trapping rate, similar to what recently reported for other red clade algae such as Chromera velia and Phaeodactylum tricornutum. The method reported therefore may also be suitable for other still partially unexplored algae, such as cryptophytes.
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Affiliation(s)
- Eliška Kuthanová Trsková
- Institute of Microbiology, Academy of Sciences of the Czech Republic, 379 81, Třeboň, Czech Republic
- Faculty of Science, University of South Bohemia in České Budějovice, 370 05, České Budějovice, Czech Republic
| | - David Bína
- Faculty of Science, University of South Bohemia in České Budějovice, 370 05, České Budějovice, Czech Republic
- Institute of Plant Molecular Biology, Biology Centre CAS, 370 05, České Budějovice, Czech Republic
| | - Stefano Santabarbara
- Photosynthesis Research Unit, Centro Studi sulla Biologia Cellulare e Molecolare delle Piante, 20133, Milan, Italy
| | - Roman Sobotka
- Institute of Microbiology, Academy of Sciences of the Czech Republic, 379 81, Třeboň, Czech Republic
- Faculty of Science, University of South Bohemia in České Budějovice, 370 05, České Budějovice, Czech Republic
| | - Radek Kaňa
- Institute of Microbiology, Academy of Sciences of the Czech Republic, 379 81, Třeboň, Czech Republic
- Faculty of Science, University of South Bohemia in České Budějovice, 370 05, České Budějovice, Czech Republic
| | - Erica Belgio
- Institute of Microbiology, Academy of Sciences of the Czech Republic, 379 81, Třeboň, Czech Republic
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21
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pH dependence, kinetics and light-harvesting regulation of nonphotochemical quenching in Chlamydomonas. Proc Natl Acad Sci U S A 2019; 116:8320-8325. [PMID: 30962362 PMCID: PMC6486713 DOI: 10.1073/pnas.1817796116] [Citation(s) in RCA: 51] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Photosynthetic organisms utilize sunlight as a form of energy. Under low light, they maximize their capacity to harvest photons; however, under excess light, they dissipate part of the harvested energy to prevent photodamage, at the expense of light-use efficiency. Optimally balancing light harvesting and energy dissipation in natural (fluctuating light) conditions is considered a target for improving the productivity of both algae and plants. Here we have studied the energy dissipation process in the green alga Chlamydomonas reinhardtii in vivo. We found that it is remarkably different from that of higher plants, highlighting the need of developing tailor-made strategies to optimize the light harvesting–energy dissipation balance in different organisms. Sunlight drives photosynthesis but can also cause photodamage. To protect themselves, photosynthetic organisms dissipate the excess absorbed energy as heat, in a process known as nonphotochemical quenching (NPQ). In green algae, diatoms, and mosses, NPQ depends on the light-harvesting complex stress-related (LHCSR) proteins. Here we investigated NPQ in Chlamydomonas reinhardtii using an approach that maintains the cells in a stable quenched state. We show that in the presence of LHCSR3, all of the photosystem (PS) II complexes are quenched and the LHCs are the site of quenching, which occurs at a rate of ∼150 ps−1 and is not induced by LHCII aggregation. The effective light-harvesting capacity of PSII decreases upon NPQ, and the NPQ rate is independent of the redox state of the reaction center. Finally, we could measure the pH dependence of NPQ, showing that the luminal pH is always above 5.5 in vivo and highlighting the role of LHCSR3 as an ultrasensitive pH sensor.
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22
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Qin X, Pi X, Wang W, Han G, Zhu L, Liu M, Cheng L, Shen JR, Kuang T, Sui SF. Structure of a green algal photosystem I in complex with a large number of light-harvesting complex I subunits. NATURE PLANTS 2019; 5:263-272. [PMID: 30850820 DOI: 10.1038/s41477-019-0379-y] [Citation(s) in RCA: 79] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2018] [Accepted: 02/04/2019] [Indexed: 05/05/2023]
Abstract
Photosystem I (PSI) is a highly efficient natural light-energy converter, and has diverse light-harvesting antennas associated with its core in different photosynthetic organisms. In green algae, an extremely large light-harvesting complex I (LHCI) captures and transfers energy to the PSI core. Here, we report the structure of PSI-LHCI from a green alga Bryopsis corticulans at 3.49 Å resolution, obtained by single-particle cryo-electron microscopy, which revealed 13 core subunits including subunits characteristic of both prokaryotes and eukaryotes, and 10 light-harvesting complex a (Lhca) antennas that form a double semi-ring and an additional Lhca dimer, including a novel four-transmembrane-helix Lhca. In total, 244 chlorophylls were identified, some of which were located at key positions for the fast energy transfer. These results provide a firm structural basis for unravelling the mechanisms of light-energy harvesting, transfer and quenching in the green algal PSI-LHCI, and important clues as to how PSI-LHCI has changed during evolution.
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Affiliation(s)
- Xiaochun Qin
- School of Biological Science and Technology, University of Jinan, Jinan, China
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China
| | - Xiong Pi
- State Key Laboratory of Membrane Biology, Beijing Advanced Innovation Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing, China
| | - Wenda Wang
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China
| | - Guangye Han
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China
| | - Lixia Zhu
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Mingmei Liu
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Linpeng Cheng
- State Key Laboratory of Membrane Biology, Beijing Advanced Innovation Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing, China
| | - Jian-Ren Shen
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China
- Institute for Interdisciplinary Science, Okayama University, Okayama, Japan
| | - Tingyun Kuang
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
| | - Sen-Fang Sui
- State Key Laboratory of Membrane Biology, Beijing Advanced Innovation Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing, China.
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23
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Su X, Ma J, Pan X, Zhao X, Chang W, Liu Z, Zhang X, Li M. Antenna arrangement and energy transfer pathways of a green algal photosystem-I-LHCI supercomplex. NATURE PLANTS 2019; 5:273-281. [PMID: 30850819 DOI: 10.1038/s41477-019-0380-5] [Citation(s) in RCA: 88] [Impact Index Per Article: 17.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2018] [Accepted: 02/04/2019] [Indexed: 05/05/2023]
Abstract
During oxygenic photosynthesis, photosystems I and II (PSI and PSII) are essential for light-driven electron transport. Excitation energy transfer in PSI occurs extremely quickly, making it an efficient energy converter. In the alga Chlamydomonas reinhardtii (Cr), multiple units of light-harvesting complex I (LHCI) bind to the PSI core and function as peripheral antennae, forming a PSI-LHCI supercomplex. CrPSI-LHCI shows significantly larger antennae compared with plant PSI-LHCI while maintaining highly efficient energy transfer from LHCI to PSI. Here, we report structures of CrPSI-LHCI, solved by cryo-electron microscopy, revealing that up to ten LHCIs are associated with the PSI core. The structures provide detailed information about antenna organization and pigment arrangement within the supercomplexes. Highly populated and closely associated chlorophylls in the antennae explain the high efficiency of light harvesting and excitation energy transfer in CrPSI-LHCI.
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Affiliation(s)
- Xiaodong Su
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
| | - Jun Ma
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
| | - Xiaowei Pan
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
| | - Xuelin Zhao
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
| | - Wenrui Chang
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Zhenfeng Liu
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Xinzheng Zhang
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China.
- Center for Biological Imaging, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
| | - Mei Li
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
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24
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Nama S, Madireddi SK, Yadav RM, Subramanyam R. Non-photochemical quenching-dependent acclimation and thylakoid organization of Chlamydomonas reinhardtii to high light stress. PHOTOSYNTHESIS RESEARCH 2019; 139:387-400. [PMID: 29982908 DOI: 10.1007/s11120-018-0551-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2018] [Accepted: 06/30/2018] [Indexed: 05/19/2023]
Abstract
Light is essential for all photosynthetic organisms while an excess of it can lead to damage mainly the photosystems of the thylakoid membrane. In this study, we have grown Chlamydomonas reinhardtii cells in different intensities of high light to understand the photosynthetic process with reference to thylakoid membrane organization during its acclimation process. We observed, the cells acclimatized to long-term response to high light intensities of 500 and 1000 µmol m-2 s-1 with faster growth and more biomass production when compared to cells at 50 µmol m-2 s-1 light intensity. The ratio of Chl a/b was marginally decreased from the mid-log phase of growth at the high light intensity. Increased level of zeaxanthin and LHCSR3 expression was also found which is known to play a key role in non-photochemical quenching (NPQ) mechanism for photoprotection. Changes in photosynthetic parameters were observed such as increased levels of NPQ, marginal change in electron transport rate, and many other changes which demonstrate that cells were acclimatized to high light which is an adaptive mechanism. Surprisingly, PSII core protein contents have marginally reduced when compared to peripherally arranged LHCII in high light-grown cells. Further, we also observed alterations in stromal subunits of PSI and low levels of PsaG, probably due to disruption of PSI assembly and also its association with LHCI. During the process of acclimation, changes in thylakoid organization occurred in high light intensities with reduction of PSII supercomplex formation. This change may be attributed to alteration of protein-pigment complexes which are in agreement with circular dichoism spectra of high light-acclimatized cells, where decrease in the magnitude of psi-type bands indicates changes in ordered arrays of PSII-LHCII supercomplexes. These results specify that acclimation to high light stress through NPQ mechanism by expression of LHCSR3 and also observed changes in thylakoid protein profile/supercomplex formation lead to low photochemical yield and more biomass production in high light condition.
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Affiliation(s)
- Srilatha Nama
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, Telangana, India
| | - Sai Kiran Madireddi
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, Telangana, India
| | - Ranay Mohan Yadav
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, Telangana, India
| | - Rajagopal Subramanyam
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, Telangana, India.
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25
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Antoshvili M, Caspy I, Hippler M, Nelson N. Structure and function of photosystem I in Cyanidioschyzon merolae. PHOTOSYNTHESIS RESEARCH 2019; 139:499-508. [PMID: 29582227 DOI: 10.1007/s11120-018-0501-4] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Accepted: 03/21/2018] [Indexed: 05/19/2023]
Abstract
The evolution of photosynthesis from primitive photosynthetic bacteria to higher plants has been driven by the need to adapt to a wide range of environmental conditions. The red alga Cyanidioschyzon merolae is a primitive organism, which is capable of performing photosynthesis in extreme acidic and hot environments. The study of its photosynthetic machinery may provide new insight on the evolutionary path of photosynthesis and on light harvesting and its regulation in eukaryotes. With that aim, the structural and functional properties of the PSI complex were investigated by biochemical characterization, mass spectrometry, and X-ray crystallography. PSI was purified from cells grown at 25 and 42 °C, crystallized and its crystal structure was solved at 4 Å resolution. The structure of C. merolae reveals a core complex with a crescent-shaped structure, formed by antenna proteins. In addition, the structural model shows the position of PsaO and PsaM. PsaG and PsaH are present in plant complex and are missing from the C. merolae model as expected. This paper sheds new light onto the evolution of photosynthesis, which gives a strong indication for the chimerical properties of red algae PSI. The subunit composition of the PSI core from C. merolae and its associated light-harvesting antennae suggests that it is an evolutionary and functional intermediate between cyanobacteria and plants.
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Affiliation(s)
- Maya Antoshvili
- Department of Biochemistry and Molecular Biology, The George S. Wise Faculty of Life Sciences, Tel Aviv University, 69978, Tel Aviv, Israel
| | - Ido Caspy
- Department of Biochemistry and Molecular Biology, The George S. Wise Faculty of Life Sciences, Tel Aviv University, 69978, Tel Aviv, Israel
| | - Michael Hippler
- Institute of Plant Biology and Biotechnology, University of Münster, 48143, Münster, Germany
| | - Nathan Nelson
- Department of Biochemistry and Molecular Biology, The George S. Wise Faculty of Life Sciences, Tel Aviv University, 69978, Tel Aviv, Israel.
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26
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Kubota-Kawai H, Burton-Smith RN, Tokutsu R, Song C, Akimoto S, Yokono M, Ueno Y, Kim E, Watanabe A, Murata K, Minagawa J. Ten antenna proteins are associated with the core in the supramolecular organization of the photosystem I supercomplex in Chlamydomonas reinhardtii. J Biol Chem 2019; 294:4304-4314. [PMID: 30670590 DOI: 10.1074/jbc.ra118.006536] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2018] [Revised: 01/11/2019] [Indexed: 12/20/2022] Open
Abstract
Photosystem I (PSI) is a large pigment-protein complex mediating light-driven charge separation and generating a highly negative redox potential, which is eventually utilized to produce organic matter. In plants and algae, PSI possesses outer antennae, termed light-harvesting complex I (LHCI), which increase the energy flux to the reaction center. The number of outer antennae for PSI in the green alga Chlamydomonas reinhardtii is known to be larger than that of land plants. However, their exact number and location remain to be elucidated. Here, applying a newly established sample purification procedure, we isolated a highly pure PSI-LHCI supercomplex containing all nine LHCA gene products under state 1 conditions. Single-particle cryo-EM revealed the 3D structure of this supercomplex at 6.9 Å resolution, in which the densities near the PsaF and PsaJ subunits were assigned to two layers of LHCI belts containing eight LHCIs, whereas the densities between the PsaG and PsaH subunits on the opposite side of the LHCI belt were assigned to two extra LHCIs. Using single-particle cryo-EM, we also determined the 2D projection map of the lhca2 mutant, which confirmed the assignment of LHCA2 and LHCA9 to the densities between PsaG and PsaH. Spectroscopic measurements of the PSI-LHCI supercomplex suggested that the bound LHCA2 and LHCA9 proteins have the ability to increase the light-harvesting energy for PSI. We conclude that the PSI in C. reinhardtii has a larger and more distinct outer-antenna organization and higher light-harvesting capability than that in land plants.
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Affiliation(s)
- Hisako Kubota-Kawai
- From the Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan.,Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Saitama 332-0012, Japan
| | - Raymond N Burton-Smith
- From the Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan.,Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Saitama 332-0012, Japan
| | - Ryutaro Tokutsu
- From the Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan.,Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Saitama 332-0012, Japan.,the Departments of Basic Biology and
| | - Chihong Song
- the National Institute for Physiological Sciences, Okazaki, Aichi 444-8585, Japan
| | - Seiji Akimoto
- the Graduate School of Science, Kobe University, Kobe 657-8501, Japan, and
| | - Makio Yokono
- the Innovation Center, Nippon Flour Mills Co., Ltd., Atsugi 243-0041, Japan
| | - Yoshifumi Ueno
- the Graduate School of Science, Kobe University, Kobe 657-8501, Japan, and
| | - Eunchul Kim
- From the Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan
| | - Akimasa Watanabe
- From the Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan.,Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Saitama 332-0012, Japan.,the Departments of Basic Biology and
| | - Kazuyoshi Murata
- the National Institute for Physiological Sciences, Okazaki, Aichi 444-8585, Japan.,Physiological Sciences, School of Life Science, The Graduate University for Advanced Studies (SOKENDAI), Okazaki 444-8585, Japan
| | - Jun Minagawa
- From the Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan, .,Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Saitama 332-0012, Japan.,the Departments of Basic Biology and
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27
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Pinnola A, Alboresi A, Nosek L, Semchonok D, Rameez A, Trotta A, Barozzi F, Kouřil R, Dall'Osto L, Aro EM, Boekema EJ, Bassi R. A LHCB9-dependent photosystem I megacomplex induced under low light in Physcomitrella patens. NATURE PLANTS 2018; 4:910-919. [PMID: 30374091 DOI: 10.1038/s41477-018-0270-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Accepted: 09/05/2018] [Indexed: 05/10/2023]
Abstract
Photosystem I of the moss Physcomitrella patens has special properties, including the capacity to undergo non-photochemical fluorescence quenching. We studied the organization of photosystem I under different light and carbon supply conditions in wild-type moss and in moss with the lhcb9 (light-harvesting complex) knockout genotype, which lacks an antenna protein endowed with red-shifted absorption forms. Wild-type moss, when grown on sugars and in low light, accumulated LHCB9 proteins and a large form of the photosystem I supercomplex, which, besides the canonical four LHCI subunits, included a LHCII trimer and four additional LHC monomers. The lhcb9 knockout produced an angiosperm-like photosystem I supercomplex with four LHCI subunits irrespective of the growth conditions. Growth in the presence of sublethal concentrations of electron transport inhibitors that caused oxidation or reduction of the plastoquinone pool prevented or promoted, respectively, the accumulation of LHCB9 and the formation of the photosystem I megacomplex. We suggest that LHCB9 is a key subunit regulating the antenna size of photosystem I and the ability to avoid the over-reduction of plastoquinone: this condition is potentially dangerous in the shaded and sunfleck-rich environment typical of mosses, whose plastoquinone pool is reduced by both photosystem II and the oxidation of sugar substrates.
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Affiliation(s)
- Alberta Pinnola
- Department of Biotechnology, University of Verona, Verona, Italy
- Department of Biology and Biotechnology 'L. Spallanzani'(DBB), University of Pavia, Pavia, Italy
| | | | - Lukáš Nosek
- Department of Biophysics, Faculty of Science, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic
| | - Dmitry Semchonok
- Electron Microscopy Group, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, The Netherlands
| | - Arshad Rameez
- Department of Biophysics, Faculty of Science, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic
- Electron Microscopy Group, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, The Netherlands
| | - Andrea Trotta
- Molecular Plant Biology, Department of Biochemistry, University of Turku, Turku, Finland
| | - Fabrizio Barozzi
- Department of Biotechnology, University of Verona, Verona, Italy
| | - Roman Kouřil
- Department of Biophysics, Faculty of Science, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic
| | - Luca Dall'Osto
- Department of Biotechnology, University of Verona, Verona, Italy
| | - Eva-Mari Aro
- Molecular Plant Biology, Department of Biochemistry, University of Turku, Turku, Finland
| | - Egbert J Boekema
- Electron Microscopy Group, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, The Netherlands
| | - Roberto Bassi
- Department of Biotechnology, University of Verona, Verona, Italy.
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28
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Iwai M, Grob P, Iavarone AT, Nogales E, Niyogi KK. A unique supramolecular organization of photosystem I in the moss Physcomitrella patens. NATURE PLANTS 2018; 4:904-909. [PMID: 30374090 PMCID: PMC7806276 DOI: 10.1038/s41477-018-0271-1] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2018] [Accepted: 09/05/2018] [Indexed: 05/03/2023]
Abstract
The photosynthesis machinery in chloroplast thylakoid membranes is comprised of multiple protein complexes and supercomplexes1,2. Here, we show a novel supramolecular organization of photosystem I (PSI) in the moss Physcomitrella patens by single-particle cryo-electron microscopy. The moss-specific light-harvesting complex (LHC) protein Lhcb9 is involved in this PSI supercomplex, which has been shown to have a molecular density similar to that of the green alga Chlamydomonas reinhardtii3. Our results show that the structural organization is unexpectedly different-two rows of the LHCI belt exist as in C. reinhardtii4, but the outer one is shifted toward the PsaK side. Furthermore, one trimeric LHC protein and one monomeric LHC protein position alongside PsaL/K, filling the gap between these subunits and the outer LHCI belt. We provide evidence showing that Lhcb9 is a key factor, acting as a linkage between the PSI core and the outer LHCI belt to form the unique supramolecular organization of the PSI supercomplex in P. patens.
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Affiliation(s)
- Masakazu Iwai
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA.
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
| | - Patricia Grob
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
- Howard Hughes Medical Institute, University of California, Berkeley, CA, USA
| | - Anthony T Iavarone
- QB3/Chemistry Mass Spectrometry Facility, University of California, Berkeley, CA, USA
| | - Eva Nogales
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
- Howard Hughes Medical Institute, University of California, Berkeley, CA, USA
- Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA
| | - Krishna K Niyogi
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA.
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
- Howard Hughes Medical Institute, University of California, Berkeley, CA, USA.
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29
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Ozawa SI, Bald T, Onishi T, Xue H, Matsumura T, Kubo R, Takahashi H, Hippler M, Takahashi Y. Configuration of Ten Light-Harvesting Chlorophyll a/ b Complex I Subunits in Chlamydomonas reinhardtii Photosystem I. PLANT PHYSIOLOGY 2018; 178:583-595. [PMID: 30126869 PMCID: PMC6181050 DOI: 10.1104/pp.18.00749] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2018] [Accepted: 08/07/2018] [Indexed: 05/03/2023]
Abstract
In plants, the photosystem I (PSI) core complex stably associates with its light-harvesting chlorophyll a/b complex I (LHCI) to form the PSI-LHCI supercomplex. The vascular plant PSI core complex associates with four distinct LHCI subunits, whereas that of the green alga Chlamydomonas reinhardtii binds nine distinct LHCI subunits (LHCA1-LHCA9). The stoichiometry and configuration of these LHCI subunits in the PSI-LHCI supercomplex of C. reinhardtii remain controversial. Here, we determined the stoichiometry of the nine distinct LHCI subunits relative to PSI subunits through uniform labeling of total proteins using 14C. We separated the nine LHCI polypeptides by three different sodium dodecyl sulfate-polyacrylamide gel electrophoresis systems. Our data revealed that the PSI-LHCI supercomplex contains two LHCA1 proteins and one of each of the other eight LHCI subunits. Subsequently, we identified their cross-linked products by immunodetection and mass spectrometry to determine the configuration of the 10 LHCI subunits within the PSI-LHCI supercomplex. Furthermore, analyses of PSI-LHCI complexes isolated from ΔLHCA2 and ΔLHCA5 mutants and oligomeric LHCI from a PSI-deficient (ΔpsaA/B) mutant provided supporting evidence for the LHCI subunit configuration. In conclusion, eight LHCI subunits bind to the PSI core at the site of PSAF subunit in two layers: LHCA1-LHCA8-LHCA7-LHCA3 from PSAG to PSAK, in the inner layer, and LHCA1-LHCA4-LHCA6-LHCA5 in the outer layer. The other two LHCI subunits, LHCA2 and LHCA9, bind PSAB between PSAG and PSAH, PSAG-LHCA9-LHCA2-PSAH. Our study provides new insights into the LHCI configuration linked to the PSI core.
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Affiliation(s)
- Shin-Ichiro Ozawa
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
- Japan Science and Technology Agency-CREST, 4-1-8 Kawaguchi, Saitama 332-0012, Japan
| | - Till Bald
- Institute of Plant Biology and Biotechnology, University of Münster, 48143 Münster, Germany
| | - Takahito Onishi
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
| | - Huidan Xue
- Institute of Plant Biology and Biotechnology, University of Münster, 48143 Münster, Germany
| | - Takunori Matsumura
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
| | - Ryota Kubo
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
| | - Hiroko Takahashi
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
| | - Michael Hippler
- Institute of Plant Biology and Biotechnology, University of Münster, 48143 Münster, Germany
| | - Yuichiro Takahashi
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
- Japan Science and Technology Agency-CREST, 4-1-8 Kawaguchi, Saitama 332-0012, Japan
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30
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Structure of a PSI-LHCI-cyt b 6f supercomplex in Chlamydomonas reinhardtii promoting cyclic electron flow under anaerobic conditions. Proc Natl Acad Sci U S A 2018; 115:10517-10522. [PMID: 30254175 DOI: 10.1073/pnas.1809973115] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
Photosynthetic linear electron flow (LEF) produces ATP and NADPH, while cyclic electron flow (CEF) exclusively drives photophosphorylation to supply extra ATP. The fine-tuning of linear and cyclic electron transport levels allows photosynthetic organisms to balance light energy absorption with cellular energy requirements under constantly changing light conditions. As LEF and CEF share many electron transfer components, a key question is how the same individual structural units contribute to these two different functional modes. Here, we report the structural identification of a photosystem I (PSI)-light harvesting complex I (LHCI)-cytochrome (cyt) b6f supercomplex isolated from the unicellular alga Chlamydomonas reinhardtii under anaerobic conditions, which induces CEF. This provides strong evidence for the model that enhanced CEF is induced by the formation of CEF supercomplexes, when stromal electron carriers are reduced, to generate additional ATP. The additional identification of PSI-LHCI-LHCII complexes is consistent with recent findings that both CEF enhancement and state transitions are triggered by similar conditions, but can occur independently from each other. Single molecule fluorescence correlation spectroscopy indicates a physical association between cyt b6f and fluorescent chlorophyll containing PSI-LHCI supercomplexes. Single particle analysis identified top-view projections of the corresponding PSI-LHCI-cyt b6f supercomplex. Based on molecular modeling and mass spectrometry analyses, we propose a model in which dissociation of LHCA2 and LHCA9 from PSI supports the formation of this CEF supercomplex. This is supported by the finding that a Δlhca2 knockout mutant has constitutively enhanced CEF.
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31
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Kouřil R, Nosek L, Semchonok D, Boekema EJ, Ilík P. Organization of Plant Photosystem II and Photosystem I Supercomplexes. Subcell Biochem 2018; 87:259-286. [PMID: 29464563 DOI: 10.1007/978-981-10-7757-9_9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/20/2023]
Abstract
In nature, plants are continuously exposed to varying environmental conditions. They have developed a wide range of adaptive mechanisms, which ensure their survival and maintenance of stable photosynthetic performance. Photosynthesis is delicately regulated at the level of the thylakoid membrane of chloroplasts and the regulatory mechanisms include a reversible formation of a large variety of specific protein-protein complexes, supercomplexes or even larger assemblies known as megacomplexes. Revealing their structures is crucial for better understanding of their function and relevance in photosynthesis. Here we focus our attention on the isolation and a structural characterization of various large protein supercomplexes and megacomplexes, which involve Photosystem II and Photosystem I, the key constituents of photosynthetic apparatus. The photosystems are often attached to other protein complexes in thylakoid membranes such as light harvesting complexes, cytochrome b 6 f complex, and NAD(P)H dehydrogenase. Structural models of individual supercomplexes and megacomplexes provide essential details of their architecture, which allow us to discuss their function as well as physiological significance.
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Affiliation(s)
- Roman Kouřil
- Department of Biophysics, Faculty of Science, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic.
| | - Lukáš Nosek
- Department of Biophysics, Faculty of Science, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic
| | - Dmitry Semchonok
- Electron Microscopy Group, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, The Netherlands
| | - Egbert J Boekema
- Electron Microscopy Group, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, The Netherlands
| | - Petr Ilík
- Department of Biophysics, Faculty of Science, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic
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32
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Giera W, Szewczyk S, McConnell MD, Redding KE, van Grondelle R, Gibasiewicz K. Uphill energy transfer in photosystem I from Chlamydomonas reinhardtii. Time-resolved fluorescence measurements at 77 K. PHOTOSYNTHESIS RESEARCH 2018; 137:321-335. [PMID: 29619738 DOI: 10.1007/s11120-018-0506-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2018] [Accepted: 03/29/2018] [Indexed: 06/08/2023]
Abstract
Energetic properties of chlorophylls in photosynthetic complexes are strongly modulated by their interaction with the protein matrix and by inter-pigment coupling. This spectral tuning is especially striking in photosystem I (PSI) complexes that contain low-energy chlorophylls emitting above 700 nm. Such low-energy chlorophylls have been observed in cyanobacterial PSI, algal and plant PSI-LHCI complexes, and individual light-harvesting complex I (LHCI) proteins. However, there has been no direct evidence of their presence in algal PSI core complexes lacking LHCI. In order to determine the lowest-energy states of chlorophylls and their dynamics in algal PSI antenna systems, we performed time-resolved fluorescence measurements at 77 K for PSI core and PSI-LHCI complexes isolated from the green alga Chlamydomonas reinhardtii. The pool of low-energy chlorophylls observed in PSI cores is generally smaller and less red-shifted than that observed in PSI-LHCI complexes. Excitation energy equilibration between bulk and low-energy chlorophylls in the PSI-LHCI complexes at 77 K leads to population of excited states that are less red-shifted (by ~ 12 nm) than at room temperature. On the other hand, analysis of the detection wavelength dependence of the effective trapping time of bulk excitations in the PSI core at 77 K provided evidence for an energy threshold at ~ 675 nm, above which trapping slows down. Based on these observations, we postulate that excitation energy transfer from bulk to low-energy chlorophylls and from bulk to reaction center chlorophylls are thermally activated uphill processes that likely occur via higher excitonic states of energy accepting chlorophylls.
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Affiliation(s)
- Wojciech Giera
- Faculty of Physics, Adam Mickiewicz University, ul. Umultowska 85, 61-614, Poznań, Poland.
| | - Sebastian Szewczyk
- Faculty of Physics, Adam Mickiewicz University, ul. Umultowska 85, 61-614, Poznań, Poland
| | - Michael D McConnell
- Department of Chemistry and Biochemistry, and Center for Bioenergy and Photosynthesis, Arizona State University, 1711 S. Rural Rd, Box 871604, Tempe, AZ, 85287-1604, USA
| | - Kevin E Redding
- Department of Chemistry and Biochemistry, and Center for Bioenergy and Photosynthesis, Arizona State University, 1711 S. Rural Rd, Box 871604, Tempe, AZ, 85287-1604, USA
| | - Rienk van Grondelle
- Department of Physics and Astronomy, Vrije Universiteit, De Boelelaan 1081, 1081 HV, Amsterdam, The Netherlands
| | - Krzysztof Gibasiewicz
- Faculty of Physics, Adam Mickiewicz University, ul. Umultowska 85, 61-614, Poznań, Poland
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33
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Nellaepalli S, Ozawa SI, Kuroda H, Takahashi Y. The photosystem I assembly apparatus consisting of Ycf3-Y3IP1 and Ycf4 modules. Nat Commun 2018; 9:2439. [PMID: 29934511 PMCID: PMC6015050 DOI: 10.1038/s41467-018-04823-3] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2018] [Accepted: 05/24/2018] [Indexed: 12/22/2022] Open
Abstract
In oxygenic photosynthesis, light energy is converted into redox energy by two photosystems (PSI and PSII). PSI forms one of the largest multiprotein complexes in thylakoid membranes consisting of a core complex, peripheral light-harvesting complexes (LHCIs) and cofactors. Although the high-resolution structure of the PSI–LHCI complex has been determined, the assembly process remains unclear due to the rapid nature of the assembly process. Here we show that two conserved chloroplast-encoded auxiliary factors, Ycf3 and Ycf4, form modules that mediate PSI assembly. The first module consists of the tetratricopeptide repeat protein Ycf3 and its interacting partner, Y3IP1, and mainly facilitates the assembly of reaction center subunits. The second module consists of oligomeric Ycf4 and facilitates the integration of peripheral PSI subunits and LHCIs into the PSI reaction center subcomplex. We reveal that these two modules are major mediators of the PSI–LHCI assembly process. Photosystem I is a large multiprotein complex embedded in the chloroplast thylakoid membrane. Here the authors provide evidence for a modular assembly process, whereby Ycf3 facilitates assembly of the reaction center, while Ycf4 incorporates peripheral core and light harvesting complex subunits to the reaction center.
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Affiliation(s)
- Sreedhar Nellaepalli
- Research Institute for Interdisciplinary Science, Okayama University, 3-1-1 Tsushima-naka, Kita-ku, Okayama, 700-8530, Japan.,JST-CREST, Tokyo, Japan
| | - Shin-Ichiro Ozawa
- Research Institute for Interdisciplinary Science, Okayama University, 3-1-1 Tsushima-naka, Kita-ku, Okayama, 700-8530, Japan.,JST-CREST, Tokyo, Japan
| | - Hiroshi Kuroda
- Research Institute for Interdisciplinary Science, Okayama University, 3-1-1 Tsushima-naka, Kita-ku, Okayama, 700-8530, Japan.,JST-CREST, Tokyo, Japan
| | - Yuichiro Takahashi
- Research Institute for Interdisciplinary Science, Okayama University, 3-1-1 Tsushima-naka, Kita-ku, Okayama, 700-8530, Japan. .,JST-CREST, Tokyo, Japan.
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Unique organization of photosystem I-light-harvesting supercomplex revealed by cryo-EM from a red alga. Proc Natl Acad Sci U S A 2018; 115:4423-4428. [PMID: 29632169 DOI: 10.1073/pnas.1722482115] [Citation(s) in RCA: 94] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Photosystem I (PSI) is one of the two photosystems present in oxygenic photosynthetic organisms and functions to harvest and convert light energy into chemical energy in photosynthesis. In eukaryotic algae and higher plants, PSI consists of a core surrounded by variable species and numbers of light-harvesting complex (LHC)I proteins, forming a PSI-LHCI supercomplex. Here, we report cryo-EM structures of PSI-LHCR from the red alga Cyanidioschyzon merolae in two forms, one with three Lhcr subunits attached to the side, similar to that of higher plants, and the other with two additional Lhcr subunits attached to the opposite side, indicating an ancient form of PSI-LHCI. Furthermore, the red algal PSI core showed features of both cyanobacterial and higher plant PSI, suggesting an intermediate type during evolution from prokaryotes to eukaryotes. The structure of PsaO, existing in eukaryotic organisms, was identified in the PSI core and binds three chlorophylls a and may be important in harvesting energy and in mediating energy transfer from LHCII to the PSI core under state-2 conditions. Individual attaching sites of LHCRs with the core subunits were identified, and each Lhcr was found to contain 11 to 13 chlorophylls a and 5 zeaxanthins, which are apparently different from those of LHCs in plant PSI-LHCI. Together, our results reveal unique energy transfer pathways different from those of higher plant PSI-LHCI, its adaptation to the changing environment, and the possible changes of PSI-LHCI during evolution from prokaryotes to eukaryotes.
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Marco P, Kozuleva M, Eilenberg H, Mazor Y, Gimeson P, Kanygin A, Redding K, Weiner I, Yacoby I. Binding of ferredoxin to algal photosystem I involves a single binding site and is composed of two thermodynamically distinct events. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2018; 1859:234-243. [DOI: 10.1016/j.bbabio.2018.01.001] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2017] [Revised: 01/07/2018] [Accepted: 01/08/2018] [Indexed: 10/18/2022]
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Röding A, Boekema E, Büchel C. The structure of FCPb, a light-harvesting complex in the diatom Cyclotella meneghiniana. PHOTOSYNTHESIS RESEARCH 2018; 135:203-211. [PMID: 28039566 DOI: 10.1007/s11120-016-0328-9] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2016] [Accepted: 12/14/2016] [Indexed: 06/06/2023]
Abstract
Diatoms possess fucoxanthin chlorophyll proteins (FCP) as light-harvesting systems. These membrane intrinsic proteins bind fucoxanthin as major carotenoid and Chl c as accessory chlorophyll. The relatively high sequence homology to higher plant light-harvesting complex II gave rise to the assumption of a similar overall structure. From centric diatoms like Cyclotella meneghiniana, however, two major FCP complexes can be isolated. FCPa, composed of Fcp2 and Fcp6 subunits, was demonstrated to be trimeric, whereas FCPb, known to contain Fcp5 polypeptides, is of higher oligomeric state. No molecular structure of either complex is available so far. Here we used electron microscopy and single particle analysis to elucidate the overall architecture of FCPb. The complexes are built from trimers as basic unit, assembling into nonameric moieties. The trimer itself is smaller, i.e. more compact than LHCII, but the main structural features are conserved.
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Affiliation(s)
- Anja Röding
- Goethe University Frankfurt, Max-von-Laue-Straße 9, 60438, Frankfurt, Germany
| | - Egbert Boekema
- Department of Electron Microscopy, Groningen Biomolecular Sciences & Biotechnology Institute, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands
| | - Claudia Büchel
- Goethe University Frankfurt, Max-von-Laue-Straße 9, 60438, Frankfurt, Germany.
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Haniewicz P, Abram M, Nosek L, Kirkpatrick J, El-Mohsnawy E, Olmos JDJ, Kouřil R, Kargul JM. Molecular Mechanisms of Photoadaptation of Photosystem I Supercomplex from an Evolutionary Cyanobacterial/Algal Intermediate. PLANT PHYSIOLOGY 2018; 176:1433-1451. [PMID: 29187568 PMCID: PMC5813541 DOI: 10.1104/pp.17.01022] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2017] [Accepted: 11/28/2017] [Indexed: 05/28/2023]
Abstract
The monomeric photosystem I-light-harvesting antenna complex I (PSI-LHCI) supercomplex from the extremophilic red alga Cyanidioschyzon merolae represents an intermediate evolutionary link between the cyanobacterial PSI reaction center and its green algal/higher plant counterpart. We show that the C. merolae PSI-LHCI supercomplex is characterized by robustness in various extreme conditions. By a combination of biochemical, spectroscopic, mass spectrometry, and electron microscopy/single particle analyses, we dissected three molecular mechanisms underlying the inherent robustness of the C. merolae PSI-LHCI supercomplex: (1) the accumulation of photoprotective zeaxanthin in the LHCI antenna and the PSI reaction center; (2) structural remodeling of the LHCI antenna and adjustment of the effective absorption cross section; and (3) dynamic readjustment of the stoichiometry of the two PSI-LHCI isomers and changes in the oligomeric state of the PSI-LHCI supercomplex, accompanied by dissociation of the PsaK core subunit. We show that the largest low light-treated C. merolae PSI-LHCI supercomplex can bind up to eight Lhcr antenna subunits, which are organized as two rows on the PsaF/PsaJ side of the core complex. Under our experimental conditions, we found no evidence of functional coupling of the phycobilisomes with the PSI-LHCI supercomplex purified from various light conditions, suggesting that the putative association of this antenna with the PSI supercomplex is absent or may be lost during the purification procedure.
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Affiliation(s)
- Patrycja Haniewicz
- Solar Fuels Laboratory, Center of New Technologies, University of Warsaw, 02-097 Warsaw, Poland
| | - Mateusz Abram
- Solar Fuels Laboratory, Center of New Technologies, University of Warsaw, 02-097 Warsaw, Poland
- Faculty of Biology, University of Warsaw, 02-096 Warsaw, Poland
| | - Lukáš Nosek
- Centre of the Region Haná for Biotechnological and Agricultural Research, Department of Biophysics, Faculty of Science, Palacký University, 783 71 Olomouc, Czech Republic
| | | | - Eithar El-Mohsnawy
- Botany Department, Faculty of Science, Kafrelsheikh University, 33516, Kafr El-Sheikh, Egypt
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr University, D-44780 Bochum, Germany
| | - Julian D Janna Olmos
- Solar Fuels Laboratory, Center of New Technologies, University of Warsaw, 02-097 Warsaw, Poland
- Faculty of Biology, University of Warsaw, 02-096 Warsaw, Poland
| | - Roman Kouřil
- Centre of the Region Haná for Biotechnological and Agricultural Research, Department of Biophysics, Faculty of Science, Palacký University, 783 71 Olomouc, Czech Republic
| | - Joanna M Kargul
- Solar Fuels Laboratory, Center of New Technologies, University of Warsaw, 02-097 Warsaw, Poland
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Wittkopp TM, Schmollinger S, Saroussi S, Hu W, Zhang W, Fan Q, Gallaher SD, Leonard MT, Soubeyrand E, Basset GJ, Merchant SS, Grossman AR, Duanmu D, Lagarias JC. Bilin-Dependent Photoacclimation in Chlamydomonas reinhardtii. THE PLANT CELL 2017; 29:2711-2726. [PMID: 29084873 PMCID: PMC5728120 DOI: 10.1105/tpc.17.00149] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2017] [Revised: 09/26/2017] [Accepted: 10/27/2017] [Indexed: 05/18/2023]
Abstract
In land plants, linear tetrapyrrole (bilin)-based phytochrome photosensors optimize photosynthetic light capture by mediating massive reprogramming of gene expression. But, surprisingly, many green algal genomes lack phytochrome genes. Studies of the heme oxygenase mutant (hmox1) of the green alga Chlamydomonas reinhardtii suggest that bilin biosynthesis in plastids is essential for proper regulation of a nuclear gene network implicated in oxygen detoxification during dark-to-light transitions. hmox1 cannot grow photoautotrophically and photoacclimates poorly to increased illumination. We show that these phenotypes are due to reduced accumulation of photosystem I (PSI) reaction centers, the PSI electron acceptors 5'-monohydroxyphylloquinone and phylloquinone, and the loss of PSI and photosystem II antennae complexes during photoacclimation. The hmox1 mutant resembles chlorophyll biosynthesis mutants phenotypically, but can be rescued by exogenous biliverdin IXα, the bilin produced by HMOX1. This rescue is independent of photosynthesis and is strongly dependent on blue light. RNA-seq comparisons of hmox1, genetically complemented hmox1, and chemically rescued hmox1 reveal that tetrapyrrole biosynthesis and known photoreceptor and photosynthesis-related genes are not impacted in the hmox1 mutant at the transcript level. We propose that a bilin-based, blue-light-sensing system within plastids evolved together with a bilin-based retrograde signaling pathway to ensure that a robust photosynthetic apparatus is sustained in light-grown Chlamydomonas.
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Affiliation(s)
- Tyler M Wittkopp
- Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305
- Department of Biology, Stanford University, Stanford, California 94305
| | - Stefan Schmollinger
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095
- Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095
| | - Shai Saroussi
- Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305
| | - Wei Hu
- Department of Molecular and Cellular Biology, University of California, Davis, California 95616
| | - Weiqing Zhang
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
| | - Qiuling Fan
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
| | - Sean D Gallaher
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095
- Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095
| | - Michael T Leonard
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095
| | - Eric Soubeyrand
- Horticultural Sciences Department, University of Florida, Gainesville, Florida 32611
| | - Gilles J Basset
- Horticultural Sciences Department, University of Florida, Gainesville, Florida 32611
| | - Sabeeha S Merchant
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095
- Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095
| | - Arthur R Grossman
- Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305
| | - Deqiang Duanmu
- Department of Molecular and Cellular Biology, University of California, Davis, California 95616
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
| | - J Clark Lagarias
- Department of Molecular and Cellular Biology, University of California, Davis, California 95616
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Tian L, Liu Z, Wang F, Shen L, Chen J, Chang L, Zhao S, Han G, Wang W, Kuang T, Qin X, Shen JR. Isolation and characterization of PSI-LHCI super-complex and their sub-complexes from a red alga Cyanidioschyzon merolae. PHOTOSYNTHESIS RESEARCH 2017; 133:201-214. [PMID: 28405862 DOI: 10.1007/s11120-017-0384-9] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2017] [Accepted: 04/05/2017] [Indexed: 06/07/2023]
Abstract
Photosystem I (PSI)-light-harvesting complex I (LHCI) super-complex and its sub-complexes PSI core and LHCI, were purified from a unicellular red alga Cyanidioschyzon merolae and characterized. PSI-LHCI of C. merolae existed as a monomer with a molecular mass of 580 kDa. Mass spectrometry analysis identified 11 subunits (PsaA, B, C, D, E, F, I, J, K, L, O) in the core complex and three LHCI subunits, CMQ142C, CMN234C, and CMN235C in LHCI, indicating that at least three Lhcr subunits associate with the red algal PSI core. PsaG was not found in the red algae PSI-LHCI, and we suggest that the position corresponding to Lhca1 in higher plant PSI-LHCI is empty in the red algal PSI-LHCI. The PSI-LHCI complex was separated into two bands on native PAGE, suggesting that two different complexes may be present with slightly different protein compositions probably with respective to the numbers of Lhcr subunits. Based on the results obtained, a structural model was proposed for the red algal PSI-LHCI. Furthermore, pigment analysis revealed that the C. merolae PSI-LHCI contained a large amount of zeaxanthin, which is mainly associated with the LHCI complex whereas little zeaxanthin was found in the PSI core. This indicates a unique feature of the carotenoid composition of the Lhcr proteins and may suggest an important role of Zea in the light-harvesting and photoprotection of the red algal PSI-LHCI complex.
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Affiliation(s)
- Lirong Tian
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China
- University of Chinese Academy of Sciences, Yuquan Rd, Shijingshan District, Beijing, 100049, China
| | - Zheyi Liu
- Key Laboratory of Separation Sciences for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Zhongshan Road 457, Dalian, 116023, China
| | - Fangjun Wang
- Key Laboratory of Separation Sciences for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Zhongshan Road 457, Dalian, 116023, China
| | - Liangliang Shen
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China
- University of Chinese Academy of Sciences, Yuquan Rd, Shijingshan District, Beijing, 100049, China
| | - Jinghua Chen
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China
- University of Chinese Academy of Sciences, Yuquan Rd, Shijingshan District, Beijing, 100049, China
| | - Lijing Chang
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China
- University of Chinese Academy of Sciences, Yuquan Rd, Shijingshan District, Beijing, 100049, China
| | - Songhao Zhao
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China
- University of Chinese Academy of Sciences, Yuquan Rd, Shijingshan District, Beijing, 100049, China
| | - Guangye Han
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China
| | - Wenda Wang
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China
| | - Tingyun Kuang
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China
| | - Xiaochun Qin
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China.
- School of Biological Science and Technology, University of Jinan, No.336, Nanxinzhuang West Road, Jinan, 250022, China.
| | - Jian-Ren Shen
- Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, No. 20, Nanxincun, Xiangshan, Beijing, 100093, China.
- Research Institute of Interdisciplinary Science, Graduate School of Natural Science and Technology, Okayama University, Tsushima Naka 3-1-1, Okayama, 700-8530, Japan.
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Iwai M, Yokono M. Light-harvesting antenna complexes in the moss Physcomitrella patens: implications for the evolutionary transition from green algae to land plants. CURRENT OPINION IN PLANT BIOLOGY 2017; 37:94-101. [PMID: 28445834 DOI: 10.1016/j.pbi.2017.04.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2016] [Revised: 04/03/2017] [Accepted: 04/05/2017] [Indexed: 05/10/2023]
Abstract
Plants have successfully adapted to a vast range of terrestrial environments during their evolution. To elucidate the evolutionary transition of light-harvesting antenna proteins from green algae to land plants, the moss Physcomitrella patens is ideally placed basally among land plants. Compared to the genomes of green algae and land plants, the P. patens genome codes for more diverse and redundant light-harvesting antenna proteins. It also encodes Lhcb9, which has characteristics not found in other light-harvesting antenna proteins. The unique complement of light-harvesting antenna proteins in P. patens appears to facilitate protein interactions that include those lost in both green algae and land plants with regard to stromal electron transport pathways and photoprotection mechanisms. This review will highlight unique characteristics of the P. patens light-harvesting antenna system and the resulting implications about the evolutionary transition during plant terrestrialization.
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Affiliation(s)
- Masakazu Iwai
- Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102, USA; Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
| | - Makio Yokono
- Institute of Low Temperature Science, Hokkaido University, Sapporo 060-0819, Japan
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Bína D, Gardian Z, Herbstová M, Litvín R. Modular antenna of photosystem I in secondary plastids of red algal origin: a Nannochloropsis oceanica case study. PHOTOSYNTHESIS RESEARCH 2017; 131:255-266. [PMID: 27734239 DOI: 10.1007/s11120-016-0315-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Accepted: 10/05/2016] [Indexed: 06/06/2023]
Abstract
Photosystem I (PSI) is a multi-subunit integral pigment-protein complex that performs light-driven electron transfer from plastocyanin to ferredoxin in the thylakoid membrane of oxygenic photoautotrophs. In order to achieve the optimal photosynthetic performance under ambient irradiance, the absorption cross section of PSI is extended by means of peripheral antenna complexes. In eukaryotes, this role is played mostly by the pigment-protein complexes of the LHC family. The structure of the PSI-antenna supercomplexes has been relatively well understood in organisms harboring the primary plastid: red algae, green algae and plants. The secondary endosymbiotic algae, despite their major ecological importance, have so far received less attention. Here we report a detailed structural analysis of the antenna-PSI association in the stramenopile alga Nannochloropsis oceanica (Eustigmatophyceae). Several types of PSI-antenna assemblies are identified allowing for identification of antenna docking sites on the PSI core. Instances of departure of the stramenopile system from the red algal model of PSI-Lhcr structure are recorded, and evolutionary implications of these observations are discussed.
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Affiliation(s)
- David Bína
- Institute of Plant Molecular Biology, Biology Centre CAS, Branišovská 31, 370 05, České Budějovice, Czech Republic
- Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic
| | - Zdenko Gardian
- Institute of Plant Molecular Biology, Biology Centre CAS, Branišovská 31, 370 05, České Budějovice, Czech Republic
- Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic
| | - Miroslava Herbstová
- Institute of Plant Molecular Biology, Biology Centre CAS, Branišovská 31, 370 05, České Budějovice, Czech Republic
- Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic
| | - Radek Litvín
- Institute of Plant Molecular Biology, Biology Centre CAS, Branišovská 31, 370 05, České Budějovice, Czech Republic.
- Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic.
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Bujaldon S, Kodama N, Rappaport F, Subramanyam R, de Vitry C, Takahashi Y, Wollman FA. Functional Accumulation of Antenna Proteins in Chlorophyll b-Less Mutants of Chlamydomonas reinhardtii. MOLECULAR PLANT 2017; 10:115-130. [PMID: 27742488 DOI: 10.1016/j.molp.2016.10.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2016] [Revised: 09/01/2016] [Accepted: 10/04/2016] [Indexed: 05/29/2023]
Abstract
The green alga Chlamydomonas reinhardtii contains several light-harvesting chlorophyll a/b complexes (LHC): four major LHCIIs, two minor LHCIIs, and nine LHCIs. We characterized three chlorophyll b-less mutants to assess the effect of chlorophyll b deficiency on the function, assembly, and stability of these chlorophyll a/b binding proteins. We identified point mutations in two mutants that inactivate the CAO gene responsible for chlorophyll a to chlorophyll b conversion. All LHCIIs accumulated to wild-type levels in a CAO mutant but their light-harvesting function for photosystem II was impaired. In contrast, most LHCIs accumulated to wild-type levels in the mutant and their light-harvesting capability for photosystem I remained unaltered. Unexpectedly, LHCI accumulation and the photosystem I functional antenna size increased in the mutant compared with in the wild type when grown in dim light. When the CAO mutation was placed in a yellow-in-the-dark background (yid-BF3), in which chlorophyll a synthesis remains limited in dim light, accumulation of the major LHCIIs and of most LHCIs was markedly reduced, indicating that sustained synthesis of chlorophyll a is required to preserve the proteolytic resistance of antenna proteins. Indeed, after crossing yid-BF3 with a mutant defective for the thylakoid FtsH protease activity, yid-BF3-ftsh1 restored wild-type levels of LHCI, which defines LHCI as a new substrate for the FtsH protease.
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Affiliation(s)
- Sandrine Bujaldon
- Institut de Biologie Physico-Chimique, UMR7141 CNRS-UPMC, Paris 75005, France
| | - Natsumi Kodama
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan; JST-CREST, Okayama University, Okayama 700-8530, Japan
| | - Fabrice Rappaport
- Institut de Biologie Physico-Chimique, UMR7141 CNRS-UPMC, Paris 75005, France
| | - Rajagopal Subramanyam
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad 500046, India
| | - Catherine de Vitry
- Institut de Biologie Physico-Chimique, UMR7141 CNRS-UPMC, Paris 75005, France
| | - Yuichiro Takahashi
- Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan; JST-CREST, Okayama University, Okayama 700-8530, Japan.
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Snellenburg JJ, Wlodarczyk LM, Dekker JP, van Grondelle R, van Stokkum IH. A model for the 77 K excited state dynamics in Chlamydomonas reinhardtii in state 1 and state 2. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2017; 1858:64-72. [DOI: 10.1016/j.bbabio.2016.10.001] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2016] [Revised: 10/06/2016] [Accepted: 10/07/2016] [Indexed: 01/28/2023]
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Emonds‐Alt B, Coosemans N, Gerards T, Remacle C, Cardol P. Isolation and characterization of mutants corresponding to the MENA, MENB, MENC and MENE enzymatic steps of 5'-monohydroxyphylloquinone biosynthesis in Chlamydomonas reinhardtii. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2017; 89:141-154. [PMID: 27612091 PMCID: PMC5299476 DOI: 10.1111/tpj.13352] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2016] [Accepted: 08/26/2016] [Indexed: 05/28/2023]
Abstract
Phylloquinone (PhQ), or vitamin K1 , is an essential electron carrier (A1 ) in photosystem I (PSI). In the green alga Chlamydomonas reinhardtii, which is a model organism for the study of photosynthesis, a detailed characterization of the pathway is missing with only one mutant deficient for MEND having been analyzed. We took advantage of the fact that a double reduction of plastoquinone occurs in anoxia in the A1 site in the mend mutant, interrupting photosynthetic electron transfer, to isolate four new phylloquinone-deficient mutants impaired in MENA, MENB, MENC (PHYLLO) and MENE. Compared with the wild type and complemented strains for MENB and MENE, the four men mutants grow slowly in low light and are sensitive to high light. When grown in low light they show a reduced photosynthetic electron transfer due to a specific decrease of PSI. Upon exposure to high light for a few hours, PSI becomes almost completely inactive, which leads in turn to lack of phototrophic growth. Loss of PhQ also fully prevents reactivation of photosynthesis after dark anoxia acclimation. In silico analyses allowed us to propose a PhQ biosynthesis pathway in Chlamydomonas that involves 11 enzymatic steps from chorismate located in the chloroplast and in the peroxisome.
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Affiliation(s)
- Barbara Emonds‐Alt
- Department of Life Sciences, Genetics and Physiology of MicroalgaePhytoSYSTEMSInBiosUniversity of LiègeB–4000LiègeBelgium
| | - Nadine Coosemans
- Department of Life Sciences, Genetics and Physiology of MicroalgaePhytoSYSTEMSInBiosUniversity of LiègeB–4000LiègeBelgium
| | - Thomas Gerards
- Department of Life Sciences, BioenergeticsPhytoSYSTEMSInBiosUniversity of LiègeB–4000LiègeBelgium
| | - Claire Remacle
- Department of Life Sciences, Genetics and Physiology of MicroalgaePhytoSYSTEMSInBiosUniversity of LiègeB–4000LiègeBelgium
| | - Pierre Cardol
- Department of Life Sciences, Genetics and Physiology of MicroalgaePhytoSYSTEMSInBiosUniversity of LiègeB–4000LiègeBelgium
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Alboresi A, Le Quiniou C, Yadav SKN, Scholz M, Meneghesso A, Gerotto C, Simionato D, Hippler M, Boekema EJ, Croce R, Morosinotto T. Conservation of core complex subunits shaped the structure and function of photosystem I in the secondary endosymbiont alga Nannochloropsis gaditana. THE NEW PHYTOLOGIST 2017; 213:714-726. [PMID: 27620972 PMCID: PMC5216901 DOI: 10.1111/nph.14156] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2016] [Accepted: 07/13/2016] [Indexed: 05/03/2023]
Abstract
Photosystem I (PSI) is a pigment protein complex catalyzing the light-driven electron transport from plastocyanin to ferredoxin in oxygenic photosynthetic organisms. Several PSI subunits are highly conserved in cyanobacteria, algae and plants, whereas others are distributed differentially in the various organisms. Here we characterized the structural and functional properties of PSI purified from the heterokont alga Nannochloropsis gaditana, showing that it is organized as a supercomplex including a core complex and an outer antenna, as in plants and other eukaryotic algae. Differently from all known organisms, the N. gaditana PSI supercomplex contains five peripheral antenna proteins, identified by proteome analysis as type-R light-harvesting complexes (LHCr4-8). Two antenna subunits are bound in a conserved position, as in PSI in plants, whereas three additional antennae are associated with the core on the other side. This peculiar antenna association correlates with the presence of PsaF/J and the absence of PsaH, G and K in the N. gaditana genome and proteome. Excitation energy transfer in the supercomplex is highly efficient, leading to a very high trapping efficiency as observed in all other PSI eukaryotes, showing that although the supramolecular organization of PSI changed during evolution, fundamental functional properties such as trapping efficiency were maintained.
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Affiliation(s)
- Alessandro Alboresi
- Dipartimento di BiologiaUniversità di PadovaVia U. Bassi 58/B35121PadovaItaly
| | - Clotilde Le Quiniou
- Department of Physics and Astronomy and Institute for Lasers, Life and BiophotonicsFaculty of SciencesVU University AmsterdamDe Boelelaan 10811081 HVAmsterdamthe Netherlands
| | - Sathish K. N. Yadav
- Electron Microscopy GroupGroningen Biomolecular Sciences and Biotechnology InstituteUniversity of GroningenNijenborgh 79747 AGGroningenthe Netherlands
| | - Martin Scholz
- Institute of Plant Biology and BiotechnologyUniversity of MünsterMünster48143Germany
| | - Andrea Meneghesso
- Dipartimento di BiologiaUniversità di PadovaVia U. Bassi 58/B35121PadovaItaly
| | - Caterina Gerotto
- Dipartimento di BiologiaUniversità di PadovaVia U. Bassi 58/B35121PadovaItaly
| | - Diana Simionato
- Dipartimento di BiologiaUniversità di PadovaVia U. Bassi 58/B35121PadovaItaly
| | - Michael Hippler
- Institute of Plant Biology and BiotechnologyUniversity of MünsterMünster48143Germany
| | - Egbert J. Boekema
- Electron Microscopy GroupGroningen Biomolecular Sciences and Biotechnology InstituteUniversity of GroningenNijenborgh 79747 AGGroningenthe Netherlands
| | - Roberta Croce
- Department of Physics and Astronomy and Institute for Lasers, Life and BiophotonicsFaculty of SciencesVU University AmsterdamDe Boelelaan 10811081 HVAmsterdamthe Netherlands
| | - Tomas Morosinotto
- Dipartimento di BiologiaUniversità di PadovaVia U. Bassi 58/B35121PadovaItaly
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Stirbet A. The slow phase of chlorophyll a fluorescence induction in silico: Origin of the S-M fluorescence rise. PHOTOSYNTHESIS RESEARCH 2016; 130:193-213. [PMID: 26995191 DOI: 10.1007/s11120-016-0243-0] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2015] [Accepted: 03/04/2016] [Indexed: 06/05/2023]
Abstract
In higher plants, algae, and cyanobacteria, chlorophyll (Chl) a fluorescence induction (ChlFI) has a fast (under a second) increasing OJIP phase and a slow (few minutes) PS(M)T phase, where O is for origin, the minimum fluorescence, J and I for intermediate levels, P for peak, S for a semi-steady state, M for a maximum (which is sometimes missing), and T for the terminal steady-state level. We have used a photosynthesis model of Ebenhöh et al. (Philos Trans R Soc B, 2014, doi: 10.1098/rstb.2013.0223 ) in an attempt to simulate the slow PS(M)T phase and to determine the origin of the S-M rise in Chlamydomonas (C.) reinhardtii cells. Our experiments in silico show that a slow fluorescence S-M rise (as that observed, e.g., by Kodru et al. (Photosynth Res 125:219-231, 2015) can be simulated only if the photosynthetic samples are initially in a so-called "state 2," when the absorption cross section (CS) of Photosystem II (PSII) is lower than that of PSI, and Chl a fluorescence is low (see, e.g., a review by Papageorgiou and Govindjee (J Photochem Photobiol B 104:258-270, 2011). In this case, simulations show that illumination induces a state 2 (s2) to state 1 (s1) transition (qT21), and a slow S-M rise in the simulated ChlFI curve, since the fluorescence yield is known to be higher in s1, when CS of PSII is larger than that of PSI. Additionally, we have analyzed how light intensity and several photosynthetic processes influence the degree of this qT21, and thus the relative amplitude of the simulated S-M phase. A refinement of the photosynthesis model is, however, necessary in order to obtain a better fit of the simulation data with the measured ChlFI curves.
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Polukhina I, Fristedt R, Dinc E, Cardol P, Croce R. Carbon Supply and Photoacclimation Cross Talk in the Green Alga Chlamydomonas reinhardtii. PLANT PHYSIOLOGY 2016; 172:1494-1505. [PMID: 27637747 PMCID: PMC5100783 DOI: 10.1104/pp.16.01310] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2016] [Accepted: 09/12/2016] [Indexed: 05/03/2023]
Abstract
Photosynthetic organisms are exposed to drastic changes in light conditions, which can affect their photosynthetic efficiency and induce photodamage. To face these changes, they have developed a series of acclimation mechanisms. In this work, we have studied the acclimation strategies of Chlamydomonas reinhardtii, a model green alga that can grow using various carbon sources and is thus an excellent system in which to study photosynthesis. Like other photosynthetic algae, it has evolved inducible mechanisms to adapt to conditions where carbon supply is limiting. We have analyzed how the carbon availability influences the composition and organization of the photosynthetic apparatus and the capacity of the cells to acclimate to different light conditions. Using electron microscopy, biochemical, and fluorescence measurements, we show that differences in CO2 availability not only have a strong effect on the induction of the carbon-concentrating mechanisms but also change the acclimation strategy of the cells to light. For example, while cells in limiting CO2 maintain a large antenna even in high light and switch on energy-dissipative mechanisms, cells in high CO2 reduce the amount of pigments per cell and the antenna size. Our results show the high plasticity of the photosynthetic apparatus of C. reinhardtii This alga is able to use various photoacclimation strategies, and the choice of which to activate strongly depends on the carbon availability.
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Affiliation(s)
- Iryna Polukhina
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands (I.P., R.F., E.D., R.C.); and
- Genetics and Physiology of Microalgae, Institut de Botanique, Université de Liège, 4000 Liege, Belgium (P.C.)
| | - Rikard Fristedt
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands (I.P., R.F., E.D., R.C.); and
- Genetics and Physiology of Microalgae, Institut de Botanique, Université de Liège, 4000 Liege, Belgium (P.C.)
| | - Emine Dinc
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands (I.P., R.F., E.D., R.C.); and
- Genetics and Physiology of Microalgae, Institut de Botanique, Université de Liège, 4000 Liege, Belgium (P.C.)
| | - Pierre Cardol
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands (I.P., R.F., E.D., R.C.); and
- Genetics and Physiology of Microalgae, Institut de Botanique, Université de Liège, 4000 Liege, Belgium (P.C.)
| | - Roberta Croce
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands (I.P., R.F., E.D., R.C.); and
- Genetics and Physiology of Microalgae, Institut de Botanique, Université de Liège, 4000 Liege, Belgium (P.C.)
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48
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Cryo-EM structure of a tetrameric cyanobacterial photosystem I complex reveals novel subunit interactions. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2016; 1857:1619-1626. [DOI: 10.1016/j.bbabio.2016.06.012] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2016] [Revised: 06/25/2016] [Accepted: 06/28/2016] [Indexed: 11/23/2022]
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49
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Natali A, Gruber JM, Dietzel L, Stuart MCA, van Grondelle R, Croce R. Light-harvesting Complexes (LHCs) Cluster Spontaneously in Membrane Environment Leading to Shortening of Their Excited State Lifetimes. J Biol Chem 2016; 291:16730-9. [PMID: 27252376 DOI: 10.1074/jbc.m116.730101] [Citation(s) in RCA: 62] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2016] [Indexed: 11/06/2022] Open
Abstract
The light reactions of photosynthesis, which include light-harvesting and charge separation, take place in the amphiphilic environment of the thylakoid membrane. The light-harvesting complex II (LHCII) is the main responsible for light absorption in plants and green algae and is involved in photoprotective mechanisms that regulate the amount of excited states in the membrane. The dual function of LHCII has been extensively studied in detergent micelles, but recent results have indicated that the properties of this complex differ in a lipid environment. In this work we checked these suggestions by studying LHCII in liposomes. By combining bulk and single molecule measurements, we monitored the fluorescence characteristics of liposomes containing single complexes up to densely packed proteoliposomes. We show that the natural lipid environment per se does not alter the properties of LHCII, which for single complexes remain very similar to that in detergent. However, we show that LHCII has the strong tendency to cluster in the membrane and that protein interactions and the extent of crowding modulate the lifetimes of the excited state in the membrane. Finally, the presence of LHCII monomers at low concentrations of complexes per liposome is discussed.
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Affiliation(s)
- Alberto Natali
- From the Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, 1081 HV Amsterdam, The Netherlands
| | - J Michael Gruber
- From the Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, 1081 HV Amsterdam, The Netherlands
| | - Lars Dietzel
- Institute of Molecular Biosciences, Goethe-University Frankfurt/M, 60438 Frankfurt, Germany, and
| | - Marc C A Stuart
- Electron Microscopy, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Rienk van Grondelle
- From the Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, 1081 HV Amsterdam, The Netherlands
| | - Roberta Croce
- From the Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, 1081 HV Amsterdam, The Netherlands,
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50
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Bína D, Herbstová M, Gardian Z, Vácha F, Litvín R. Novel structural aspect of the diatom thylakoid membrane: lateral segregation of photosystem I under red-enhanced illumination. Sci Rep 2016; 6:25583. [PMID: 27149693 PMCID: PMC4857733 DOI: 10.1038/srep25583] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2016] [Accepted: 04/20/2016] [Indexed: 01/01/2023] Open
Abstract
Spatial segregation of photosystems in the thylakoid membrane (lateral heterogeneity) observed in plants and in the green algae is usually considered to be absent in photoautotrophs possessing secondary plastids, such as diatoms. Contrary to this assumption, here we show that thylakoid membranes in the chloroplast of a marine diatom, Phaeodactylum tricornutum, contain large areas occupied exclusively by a supercomplex of photosystem I (PSI) and its associated Lhcr antenna. These membrane areas, hundreds of nanometers in size, comprise hundreds of tightly packed PSI-antenna complexes while lacking other components of the photosynthetic electron transport chain. Analyses of the spatial distribution of the PSI-Lhcr complexes have indicated elliptical particles, each 14 × 17 nm in diameter. On larger scales, the red-enhanced illumination exerts a significant effect on the ultrastructure of chloroplasts, creating superstacks of tens of thylakoid membranes.
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Affiliation(s)
- David Bína
- Institute of Plant Molecular Biology, Biology Centre CAS, Department of Photosynthesis, Branišovská 31, České Budějovice, 37005, Czech Republic.,Faculty of Science, University of South Bohemia, Institute of Chemistry and Biochemistry, Branišovská 1760, České Budějovice, 37005, Czech Republic
| | - Miroslava Herbstová
- Institute of Plant Molecular Biology, Biology Centre CAS, Department of Photosynthesis, Branišovská 31, České Budějovice, 37005, Czech Republic.,Faculty of Science, University of South Bohemia, Institute of Chemistry and Biochemistry, Branišovská 1760, České Budějovice, 37005, Czech Republic
| | - Zdenko Gardian
- Institute of Plant Molecular Biology, Biology Centre CAS, Department of Photosynthesis, Branišovská 31, České Budějovice, 37005, Czech Republic.,Faculty of Science, University of South Bohemia, Institute of Chemistry and Biochemistry, Branišovská 1760, České Budějovice, 37005, Czech Republic
| | - František Vácha
- Institute of Plant Molecular Biology, Biology Centre CAS, Department of Photosynthesis, Branišovská 31, České Budějovice, 37005, Czech Republic.,Faculty of Science, University of South Bohemia, Institute of Chemistry and Biochemistry, Branišovská 1760, České Budějovice, 37005, Czech Republic
| | - Radek Litvín
- Institute of Plant Molecular Biology, Biology Centre CAS, Department of Photosynthesis, Branišovská 31, České Budějovice, 37005, Czech Republic.,Faculty of Science, University of South Bohemia, Institute of Chemistry and Biochemistry, Branišovská 1760, České Budějovice, 37005, Czech Republic
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