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Chen L, Zeng Q, Zhang J, Li C, Bai X, Sun F, Kliebenstein DJ, Li B. Large-scale identification of novel transcriptional regulators of the aliphatic glucosinolate pathway in Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:300-315. [PMID: 37738614 DOI: 10.1093/jxb/erad376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 09/20/2023] [Indexed: 09/24/2023]
Abstract
Aliphatic glucosinolates are a large group of plant secondary metabolites characteristic of Brassicaceae, including the model plant Arabidopsis. The diverse and complex degradation products of aliphatic glucosinolates contribute to plant responses to herbivory, pathogen attack, and environmental stresses. Most of the biosynthesis genes in the aliphatic glucosinolate pathway have been cloned in Arabidopsis, and the research focus has recently shifted to the regulatory mechanisms controlling aliphatic glucosinolate accumulation. Up till now, more than 40 transcriptional regulators have been identified as regulating the aliphatic glucosinolate pathway, but many more novel regulators likely remain to be discovered based on research evidence over the past decade. In the current study, we took a systemic approach to functionally test 155 candidate transcription factors in Arabidopsis identified by yeast one-hybrid assay, and successfully validated at least 30 novel regulators that could significantly influence the accumulation of aliphatic glucosinolates in our experimental set-up. We also showed that the regulators of the aliphatic glucosinolate pathway have balanced positive and negative effects, and glucosinolate metabolism and plant development can be coordinated. Our work is the largest scale effort so far to validate transcriptional regulators of a plant secondary metabolism pathway, and provides new insights into how the highly diverse plant secondary metabolism is regulated at the transcriptional level.
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Affiliation(s)
- Lin Chen
- State Key Laboratory of Crop Stress Biology for Arid Area, College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Qi Zeng
- State Key Laboratory of Crop Stress Biology for Arid Area, College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Jiahao Zhang
- State Key Laboratory of Crop Stress Biology for Arid Area, College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Chao Li
- State Key Laboratory of Crop Stress Biology for Arid Area, College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Xue Bai
- State Key Laboratory of Crop Stress Biology for Arid Area, College of Horticulture, Northwest A&F University, Yangling 712100, China
| | - Fengli Sun
- College of Agronomy, Northwest A&F University, Yangling 712100, China
| | - Daniel J Kliebenstein
- Department of Plant Sciences, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA
| | - Baohua Li
- State Key Laboratory of Crop Stress Biology for Arid Area, College of Horticulture, Northwest A&F University, Yangling 712100, China
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2
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Zhang R, Yang W, Pan Q, Zeng Q, Yan C, Bai X, Liu Y, Zhang L, Li B. Effects of long-term blue light irradiation on carotenoid biosynthesis and antioxidant activities in Chinese cabbage (Brassica rapa L. ssp. pekinensis). Food Res Int 2023; 174:113661. [PMID: 37981380 DOI: 10.1016/j.foodres.2023.113661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2023] [Revised: 10/29/2023] [Accepted: 11/03/2023] [Indexed: 11/21/2023]
Abstract
The aim of this study was to investigate the impact of long-term exposure to blue light-emitting diodes (LEDs) on the accumulation of indolic glucosinolates and carotenoids, as well as the plant growth and antioxidant activities in both orange and common Chinese cabbage (Brassica rapa L. ssp. pekinensis). Blue light treatment also induced higher ferric-reducing antioxidant power and 2,2-diphenyl-1-picrylhydrazyl by 20.66 % and 30.82 % and antioxidant enzyme activities catalase, peroxidase, superoxide dismutase, and the accumulation of non-enzymatic antioxidant substances (total phenols and total flavonoids) in the orange Chinese cabbage. Furthermore, long-term exposure to blue light had negative effects on the net photosynthetic rate and chlorophyll fluorescence levels. Meanwhile, blue light promoted accumulation of Indol-3-ylmethyl glucosinolate (I3M), β-carotene, lutein and zeaxanthin due to the high expression of regulatory and biosynthetic genes of the above metabolic pathways. In particular, lycopene and β-carotene content in orange Chinese cabbage increased by 60.14 % and 65.33 % compared to the ones in common line. The accumulation of carotenoid and increasing antioxidant levels in the orange cabbage line was influenced by long-term blue light irradiation, leading to better tolerance to low temperature and drought stresses. The up-regulation of transcription factors such as BrHY5-2, BrPIF4 and BrMYB12 may also contribute to the increased tolerance in orange Chinese cabbage to extreme environmental stresses. The BrHY5-2 gene could activate carotenoid biosynthetic genes and induce the accumulation of carotenoids. These findings suggested that long-term blue light irradiation could be a promising technique for increasing the nutrition value and enhancing tolerance to low temperature and drought stresses in Chinese cabbage.
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Affiliation(s)
- Ruixing Zhang
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Wenjing Yang
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Qiming Pan
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Qi Zeng
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Chengtai Yan
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Xue Bai
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Yao Liu
- Life Science Research Core Services, Northwest A & F University, Yangling 712100, Shaanxi, China.
| | - Lugang Zhang
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Baohua Li
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, China.
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3
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Liu Y, Singh SK, Pattanaik S, Wang H, Yuan L. Light regulation of the biosynthesis of phenolics, terpenoids, and alkaloids in plants. Commun Biol 2023; 6:1055. [PMID: 37853112 PMCID: PMC10584869 DOI: 10.1038/s42003-023-05435-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Accepted: 10/09/2023] [Indexed: 10/20/2023] Open
Abstract
Biosynthesis of specialized metabolites (SM), including phenolics, terpenoids, and alkaloids, is stimulated by many environmental factors including light. In recent years, significant progress has been made in understanding the regulatory mechanisms involved in light-stimulated SM biosynthesis at the transcriptional, posttranscriptional, and posttranslational levels of regulation. While several excellent recent reviews have primarily focused on the impacts of general environmental factors, including light, on biosynthesis of an individual class of SM, here we highlight the regulation of three major SM biosynthesis pathways by light-responsive gene expression, microRNA regulation, and posttranslational modification of regulatory proteins. In addition, we present our future perspectives on this topic.
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Affiliation(s)
- Yongliang Liu
- Department of Plant and Soil Sciences and Kentucky Tobacco Research and Development Center, University of Kentucky, Lexington, KY, 40546, USA
| | - Sanjay K Singh
- Department of Plant and Soil Sciences and Kentucky Tobacco Research and Development Center, University of Kentucky, Lexington, KY, 40546, USA
| | - Sitakanta Pattanaik
- Department of Plant and Soil Sciences and Kentucky Tobacco Research and Development Center, University of Kentucky, Lexington, KY, 40546, USA.
| | - Hongxia Wang
- Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences Chenshan Botanical Garden, 3888 Chenhua Road, 201602, Songjiang, Shanghai, China.
| | - Ling Yuan
- Department of Plant and Soil Sciences and Kentucky Tobacco Research and Development Center, University of Kentucky, Lexington, KY, 40546, USA.
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4
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Malhotra B, Kumar P, Bisht NC. Defense versus growth trade-offs: Insights from glucosinolates and their catabolites. PLANT, CELL & ENVIRONMENT 2023; 46:2964-2984. [PMID: 36207995 DOI: 10.1111/pce.14462] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Revised: 09/14/2022] [Accepted: 10/03/2022] [Indexed: 06/16/2023]
Abstract
Specialized metabolites are a structurally diverse group of naturally occurring compounds that facilitate plant-environment interactions. Their synthesis and maintenance in plants is overall a resource-demanding process that occurs at the expense of growth and reproduction and typically incurs several costs. Evidence emerging on different specialized compounds suggests that they serve multiple auxiliary functions to influence and moderate primary metabolism in plants. These new functionalities enable them to mediate trade-offs from defenses to growth and also to offset their production and maintenance costs in plants. Recent research on glucosinolates (GSLs), which are specialized metabolites of Brassicales, demonstrates their emerging multifunctionalities to fine-tune plant growth and development under variable environments. Herein, we present findings from the septennium on individual GSLs and their catabolites (GHPs) per se, that work as mobile signals within plants to mediate precise regulations of their primary physiological functions. Both GSLs and GHPs calibrate growth-defense trade-off interactions either synergistically or directly when they function as storage compounds, abiotic stress alleviators, and one-to-one regulators of growth pathways in plants. We finally summarize the overall lessons learned from GSLs and GHPs as a model and raise the most pressing questions to address the molecular-genetic intricacies of specialized metabolite-based trade-offs in plants.
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Affiliation(s)
- Bhanu Malhotra
- National Institute of Plant Genome Research, New Delhi, India
| | - Pawan Kumar
- National Institute of Plant Genome Research, New Delhi, India
| | - Naveen C Bisht
- National Institute of Plant Genome Research, New Delhi, India
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5
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Guo Y, Gong C, Cao B, Di T, Xu X, Dong J, Zhao K, Gao K, Su N. Blue Light Enhances Health-Promoting Sulforaphane Accumulation in Broccoli ( Brassica oleracea var. italica) Sprouts through Inhibiting Salicylic Acid Synthesis. PLANTS (BASEL, SWITZERLAND) 2023; 12:3151. [PMID: 37687397 PMCID: PMC10490093 DOI: 10.3390/plants12173151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 08/28/2023] [Accepted: 08/28/2023] [Indexed: 09/10/2023]
Abstract
As a vegetable with high nutritional value, broccoli (Brassica oleracea var. italica) is rich in vitamins, antioxidants and anti-cancer compounds. Glucosinolates (GLs) are one of the important functional components widely found in cruciferous vegetables, and their hydrolysate sulforaphane (SFN) plays a key function in the anti-cancer process. Herein, we revealed that blue light significantly induced the SFN content in broccoli sprouts, and salicylic acid (SA) was involved in this process. We investigated the molecular mechanisms of SFN accumulation with blue light treatment in broccoli sprouts and the relationship between SFN and SA. The results showed that the SFN accumulation in broccoli sprouts was significantly increased under blue light illumination, and the expression of SFN synthesis-related genes was particularly up-regulated by SA under blue light. Moreover, blue light considerably decreased the SA content compared with white light, and this decrease was more suppressed by paclobutrazol (Pac, an inhibitor of SA synthesis). In addition, the transcript level of SFN synthesis-related genes and the activity of myrosinase (MYR) paralleled the trend of SFN accumulation under blue light treatment. Overall, we concluded that SA participates in the SFN accumulation in broccoli sprouts under blue light.
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Affiliation(s)
| | | | | | | | | | | | | | | | - Nana Su
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China; (Y.G.); (C.G.); (B.C.); (T.D.); (X.X.); (J.D.); (K.Z.); (K.G.)
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6
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Mantel SJ, Sweigart AL. Postzygotic barriers persist despite ongoing introgression in hybridizing Mimulus species. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.08.05.552095. [PMID: 37577468 PMCID: PMC10418264 DOI: 10.1101/2023.08.05.552095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/15/2023]
Abstract
The evolution of postzygotic isolation is thought to be a key step in maintaining species boundaries upon secondary contact, yet the dynamics and persistence of hybrid incompatibilities in sympatric species are not well understood.Here, we explore these issues using genetic mapping in three populations of recombinant inbred lines between naturally hybridizing monkeyflowers Mimulus guttatus and M. nasutus from the sympatric Catherine Creek population.The three M. guttatus founders differ dramatically in admixture history. Comparative genetic mapping also reveals three putative inversions segregating among the M. guttatus founders, two due to admixture. We observe strong, genome-wide transmission ratio distortion, but patterns are highly variable among populations. Some distortion is explained by epistatic selection favoring parental genotypes, but tests of inter-chromosomal linkage disequilibrium also reveal multiple candidate Dobzhansky-Muller incompatibilities. We also map several genetic loci for hybrid fertility, including two interacting pairs coinciding with peaks of distortion.Remarkably, in this limited sample of M. guttatus, we discover abundant segregating variation for hybrid incompatibilities with M. nasutus, suggesting this population harbors diverse contributors to postzygotic isolation. Moreover, even with substantial admixture, hybrid incompatibilities between Mimulus species persist, suggesting postzygotic isolation might be a potent force in maintaining species barriers in this system.
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Affiliation(s)
- Samuel J. Mantel
- Department of Genetics, University of Georgia, Athens, GA, 30602, USA
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7
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Medina-Fraga AL, Chinen LA, Demkura PV, Lichy MZ, Gershenzon J, Ballaré CL, Crocco CD. AtBBX29 integrates photomorphogenesis and defense responses in Arabidopsis. Photochem Photobiol Sci 2023:10.1007/s43630-023-00391-8. [PMID: 36807054 DOI: 10.1007/s43630-023-00391-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Accepted: 02/03/2023] [Indexed: 02/21/2023]
Abstract
Light is an environmental signal that modulates plant defenses against attackers. Recent research has focused on the effects of light on defense hormone signaling; however, the connections between light signaling pathways and the biosynthesis of specialized metabolites involved in plant defense have been relatively unexplored. Here, we show that Arabidopsis BBX29, a protein that belongs to the B-Box transcription factor (TF) family, integrates photomorphogenic signaling with defense responses by promoting flavonoid, sinapate and glucosinolate accumulation in Arabidopsis leaves. AtBBX29 transcript levels were up regulated by light, through photoreceptor signaling pathways. Genetic evidence indicated that AtBBX29 up-regulates MYB12 gene expression, a TF known to induce genes related to flavonoid biosynthesis in a light-dependent manner, and MYB34 and MYB51, which encode TFs involved in the regulation of glucosinolate biosynthesis. Thus, bbx29 knockout mutants displayed low expression levels of key genes of the flavonoid biosynthetic pathway, and the opposite was true in BBX29 overexpression lines. In agreement with the transcriptomic data, bbx29 mutant plants accumulated lower levels of kaempferol glucosides, sinapoyl malate, indol-3-ylmethyl glucosinolate (I3M), 4-methylsulfinylbutyl glucosinolate (4MSOB) and 3-methylthiopropyl glucosinolate (3MSP) in rosette leaves compared to the wild-type, and showed increased susceptibility to the necrotrophic fungus Botrytis cinerea and to the herbivore Spodoptera frugiperda. In contrast, BBX29 overexpressing plants displayed increased resistance to both attackers. In addition, we found that AtBBX29 plays an important role in mediating the effects of ultraviolet-B (UV-B) radiation on plant defense against B. cinerea. Taken together, these results suggest that AtBBX29 orchestrates the accumulation of specific light-induced metabolites and regulates Arabidopsis resistance against pathogens and herbivores.
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Affiliation(s)
- Ana L Medina-Fraga
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
| | - Lucas A Chinen
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
| | - Patricia V Demkura
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
| | - Micaela Z Lichy
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
| | - Jonathan Gershenzon
- Department of Biochemistry, Max Planck Institute for Chemical Ecology, Jena, Germany
| | - Carlos L Ballaré
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
- IIBIO, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad Nacional de San Martín, B1650HMP, Buenos Aires, Argentina
| | - Carlos D Crocco
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina.
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, 1211, Geneva 4, Switzerland.
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8
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Malorni L, Cozzolino R, Magri A, Zampella L, Petriccione M. Influence of Plant-Based Biostimulant (BORTAN) on Qualitative and Aromatic Traits of Rocket Salad ( Diplotaxis tenuifolia L.). PLANTS (BASEL, SWITZERLAND) 2023; 12:plants12040730. [PMID: 36840076 PMCID: PMC9961706 DOI: 10.3390/plants12040730] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 02/01/2023] [Accepted: 02/02/2023] [Indexed: 05/27/2023]
Abstract
In this study, the influence of a new plant-based biostimulant (Bortan) on physiological and aromatic traits of rocket (Diplotaxis tenuifolia L. var. Pamela) was monitored by evaluating physico-chemical parameters (fresh and dry weight, leaf color and chlorophyll content) and biochemical traits (total phenolic compound (TP), total flavonoids (TF), ascorbic acid (AA) and antioxidant activity (AOX). Volatile profiles were also analyzed by headspace solid-phase microextraction coupled to gas chromatography-mass spectrometry, allowing the detection of 32 volatiles belonging to 5 chemical classes. Compared to the control, Bortan application enhanced leaf pigment content, including chlorophyll a, b and carotenoids (+10%, +16% and +28%, respectively) and increased TP (+34%), TF (+26%), AA (+19%) amonts and AOX value (+16%). Principal component analysis revealed a significant discrimination between the two samples. Specifically, treated samples were mainly associated with "green-leaf" volatiles, namely hexanal and 2-hexenal, 3-hexenal and 1-penten-3-one, while control rocket was directly correlated with several alcohols and to all isothiocyanates, associated with the sulfur-like odor of rocket. These findings can add further support, both for farmers and the agro-food industry, in choosing PBs as a new and sustainable practice in complementing enhanced yields with premium-quality produce. To confirm these preliminary data, further experiments are needed by enlarging the sample size, testing different concentrations of Bortan and/or using other food crops.
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Affiliation(s)
- Livia Malorni
- Institute of Food Science, National Research Council (CNR), Via Roma 64, 83100 Avellino, Italy
| | - Rosaria Cozzolino
- Institute of Food Science, National Research Council (CNR), Via Roma 64, 83100 Avellino, Italy
| | - Anna Magri
- Department of Environmental, Biological and Pharmaceutical Sciences and Technologies (DiSTABiF), University of Campania Luigi Vanvitelli, Via Vivaldi 43, 81100 Caserta, Italy
| | - Luigi Zampella
- Diachem S.p.A., Via Mozzanica 9/11, 24043 Caravaggio, Italy
| | - Milena Petriccione
- Council for Agricultural Research and Economics (CREA), Research Center for Olive, Fruits, and Citrus Crops, Via Torrino 3, 81100 Caserta, Italy
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9
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Kim JA, Moon H, Kim HS, Choi D, Kim NS, Jang J, Lee SW, Baskoro Dwi Nugroho A, Kim DH. Transcriptome and QTL mapping analyses of major QTL genes controlling glucosinolate contents in vegetable- and oilseed-type Brassica rapa plants. FRONTIERS IN PLANT SCIENCE 2023; 13:1067508. [PMID: 36743533 PMCID: PMC9891538 DOI: 10.3389/fpls.2022.1067508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Accepted: 12/29/2022] [Indexed: 06/18/2023]
Abstract
Glucosinolates (GSLs) are secondary metabolites providing defense against pathogens and herbivores in plants, and anti-carcinogenic activity against human cancer cells. Profiles of GSLs vary greatly among members of genus Brassica. In this study, we found that a reference line of Chinese cabbage (B. rapa ssp. pekinensis), 'Chiifu' contains significantly lower amounts of total GSLs than the oilseed-type B. rapa (B. rapa ssp. trilocularis) line 'LP08'. This study aimed to identify the key regulators of the high accumulation of GSLs in Brassica rapa plants using transcriptomic and linkage mapping approaches. Comparative transcriptome analysis showed that, in total, 8,276 and 9,878 genes were differentially expressed between 'Chiifu' and 'LP08' under light and dark conditions, respectively. Among 162 B. rapa GSL pathway genes, 79 were related to GSL metabolism under light conditions. We also performed QTL analysis using a single nucleotide polymorphism-based linkage map constructed using 151 F5 individuals derived from a cross between the 'Chiifu' and 'LP08' inbred lines. Two major QTL peaks were successfully identified on chromosome 3 using high-performance liquid chromatography to obtain GSL profiles from 97 F5 recombinant inbred lines. The MYB-domain transcription factor gene BrMYB28.1 (Bra012961) was found in the highest QTL peak region. The second highest peak was located near the 2-oxoacid-dependent dioxygenase gene BrGSL-OH.1 (Bra022920). This study identified major genes responsible for differing profiles of GSLs between 'Chiifu' and 'LP08'. Thus, our study provides molecular insights into differences in GSL profiles between vegetative- and oilseed-type B. rapa plants.
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Affiliation(s)
- Jin A. Kim
- Department of Agricultural Biotechnology, National Institute of Agricultural Science, Rural Development Administration, Jeonju, Jeollabuk-do, Republic of Korea
| | - Heewon Moon
- Department of Plant Science and Technology, Chung-Ang University, Anseong, Republic of Korea
| | - Hyang Suk Kim
- Department of Agricultural Biotechnology, National Institute of Agricultural Science, Rural Development Administration, Jeonju, Jeollabuk-do, Republic of Korea
| | - Dasom Choi
- Department of Plant Science and Technology, Chung-Ang University, Anseong, Republic of Korea
| | - Nan-Sun Kim
- Department of Agricultural Biotechnology, National Institute of Agricultural Science, Rural Development Administration, Jeonju, Jeollabuk-do, Republic of Korea
| | - Juna Jang
- Department of Agricultural Biotechnology, National Institute of Agricultural Science, Rural Development Administration, Jeonju, Jeollabuk-do, Republic of Korea
| | - Sang Woo Lee
- Department of Plant Science and Technology, Chung-Ang University, Anseong, Republic of Korea
| | | | - Dong-Hwan Kim
- Department of Plant Science and Technology, Chung-Ang University, Anseong, Republic of Korea
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10
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Koprivova A, Elkatmis B, Gerlich SC, Trick M, Harper AL, Bancroft I, Kopriva S. Natural Variation in OASC Gene for Mitochondrial O-Acetylserine Thiollyase Affects Sulfate Levels in Arabidopsis. PLANTS (BASEL, SWITZERLAND) 2022; 12:35. [PMID: 36616163 PMCID: PMC9824738 DOI: 10.3390/plants12010035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/11/2022] [Revised: 12/18/2022] [Accepted: 12/19/2022] [Indexed: 06/17/2023]
Abstract
Sulfur plays a vital role in the primary and secondary metabolism of plants, and carries an important function in a large number of different compounds. Despite this importance, compared to other mineral nutrients, relatively little is known about sulfur sensing and signalling, as well as about the mechanisms controlling sulfur metabolism and homeostasis. Sulfur contents in plants vary largely not only among different species, but also among accessions of the same species. We previously used associative transcriptomics to identify several genes potentially controlling variation in sulfate content in the leaves of Brassica napus, including an OASC gene for mitochondrial O-acetylserine thiollyase (OAS-TL), an enzyme involved in cysteine synthesis. Here, we show that loss of OASC in Arabidopsis thaliana lowers not only sulfate, but also glutathione levels in the leaves. The reduced accumulation is caused by lower sulfate uptake and translocation to the shoots; however, the flux through the pathway is not affected. In addition, we identified a single nucleotide polymorphism in the OASC gene among A. thaliana accessions that is linked to variation in sulfate content. Both genetic and transgenic complementation confirmed that the exchange of arginine at position 81 for lysine in numerous accessions resulted in a less active OASC and a lower sulfate content in the leaves. The mitochondrial isoform of OAS-TL is, thus, after the ATPS1 isoform of sulfurylase and the APR2 form of APS reductase 2, the next metabolic enzyme with a role in regulation of sulfate content in Arabidopsis.
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Affiliation(s)
- Anna Koprivova
- Institute for Plant Sciences, Cluster of Excellence on Plant Sciences, University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany
| | - Büsra Elkatmis
- Institute for Plant Sciences, Cluster of Excellence on Plant Sciences, University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany
| | - Silke C. Gerlich
- Institute for Plant Sciences, Cluster of Excellence on Plant Sciences, University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany
| | - Martin Trick
- John Innes Centre, Norwich Research Park, Colney, Norwich NR4 7UH, UK
| | - Andrea L. Harper
- Department of Biology, University of York, Heslington, York YO10 5DD, UK
| | - Ian Bancroft
- Department of Biology, University of York, Heslington, York YO10 5DD, UK
| | - Stanislav Kopriva
- Institute for Plant Sciences, Cluster of Excellence on Plant Sciences, University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany
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11
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Wawrzyńska A, Piotrowska J, Apodiakou A, Brückner F, Hoefgen R, Sirko A. The SLIM1 transcription factor affects sugar signaling during sulfur deficiency in Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:7362-7379. [PMID: 36099003 PMCID: PMC9730805 DOI: 10.1093/jxb/erac371] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 09/12/2022] [Indexed: 06/08/2023]
Abstract
The homeostasis of major macronutrient metabolism needs to be tightly regulated, especially when the availability of one or more nutrients fluctuates in the environment. Both sulfur metabolism and glucose signaling are important processes throughout plant growth and development, as well as during stress responses. Still, very little is known about how these processes affect each other, although they are positively connected. Here, we showed in Arabidopsis that the crucial transcription factor of sulfur metabolism, SLIM1, is involved in glucose signaling during shortage of sulfur. The germination rate of the slim1_KO mutant was severely affected by high glucose and osmotic stress. The expression of SLIM1-dependent genes in sulfur deficiency appeared to be additionally induced by a high concentration of either mannitol or glucose, but also by sucrose, which is not only the source of glucose but another signaling molecule. Additionally, SLIM1 affects PAP1 expression during sulfur deficiency by directly binding to its promoter. The lack of PAP1 induction in such conditions leads to much lower anthocyanin production. Taken together, our results indicate that SLIM1 is involved in the glucose response by modulating sulfur metabolism and directly controlling PAP1 expression in Arabidopsis during sulfur deficiency stress.
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Affiliation(s)
| | - Justyna Piotrowska
- Laboratory of Plant Protein Homeostasis, Institute of Biochemistry and Biophysics Polish Academy of Sciences, Warsaw, Poland
| | - Anastasia Apodiakou
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Franziska Brückner
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Rainer Hoefgen
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Agnieszka Sirko
- Laboratory of Plant Protein Homeostasis, Institute of Biochemistry and Biophysics Polish Academy of Sciences, Warsaw, Poland
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Sipari N, Lihavainen J, Keinänen M. Metabolite Profiling of Paraquat Tolerant Arabidopsis thaliana Radical-induced Cell Death1 ( rcd1)-A Mediator of Antioxidant Defence Mechanisms. Antioxidants (Basel) 2022; 11:antiox11102034. [PMID: 36290757 PMCID: PMC9598866 DOI: 10.3390/antiox11102034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Revised: 10/06/2022] [Accepted: 10/13/2022] [Indexed: 11/16/2022] Open
Abstract
RADICAL-INDUCED CELL DEATH1 (RCD1) is an Arabidopsis thaliana nuclear protein that is disrupted during oxidative stress. RCD1 is considered an important integrative node in development and stress responses, and the rcd1 plants have several phenotypes and altered resistance to a variety of abiotic and biotic stresses. One of the phenotypes of rcd1 is resistance to the herbicide paraquat, but the mechanisms behind it are unknown. Paraquat causes a rapid burst of reactive oxygen species (ROS) initially in the chloroplast. We performed multi-platform metabolomic analyses in wild type Col-0 and paraquat resistant rcd1 plants to identify pathways conveying resistance and the function of RCD1 in this respect. Wild type and rcd1 plants were clearly distinguished by their abundance of antioxidants and specialized metabolites and their responses to paraquat. The lack of response in rcd1 suggested constitutively active defense against ROS via elevated flavonoid, glutathione, β-carotene, and tocopherol levels, whereas its ascorbic acid levels were compromised under non-stressed control conditions when compared to Col-0. We propose that RCD1 acts as a hub that maintains basal antioxidant system, and its inactivation induces defense responses by enhancing the biosynthesis and redox cycling of low molecular weight antioxidants and specialized metabolites with profound antioxidant activities alleviating oxidative stress.
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Affiliation(s)
- Nina Sipari
- Viikki Metabolomics Unit, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, P.O. Box 65, FI-00014 Helsinki, Finland
- Department of Environmental and Biological Sciences, University of Eastern Finland, P.O. Box 111, FI-80101 Joensuu, Finland
- Correspondence: (N.S.); (M.K.)
| | - Jenna Lihavainen
- Umeå Plant Science Center, Department of Plant Physiology, Umeå Universitet, 90 187 Umeå, Sweden
| | - Markku Keinänen
- Department of Environmental and Biological Sciences, University of Eastern Finland, P.O. Box 111, FI-80101 Joensuu, Finland
- Institute of Photonics, University of Eastern Finland, P.O. Box 111, FI-80101 Joensuu, Finland
- Correspondence: (N.S.); (M.K.)
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Chao H, Li H, Yan S, Zhao W, Chen K, Wang H, Raboanatahiry N, Huang J, Li M. Further insight into decreases in seed glucosinolate content based on QTL mapping and RNA-seq in Brassica napus L. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2022; 135:2969-2991. [PMID: 35841418 DOI: 10.1007/s00122-022-04161-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Accepted: 06/22/2022] [Indexed: 06/15/2023]
Abstract
The QTL hotspots determining seed glucosinolate content instead of only four HAG1 loci and elucidation of a potential regulatory model for rapeseed SGC variation. Glucosinolates (GSLs) are amino acid-derived, sulfur-rich secondary metabolites that function as biopesticides and flavor compounds, but the high seed glucosinolate content (SGC) reduces seed quality for rapeseed meal. To dissect the genetic mechanism and further reduce SGC in rapeseed, QTL mapping was performed using an updated high-density genetic map based on a doubled haploid (DH) population derived from two parents that showed significant differences in SGC. In 15 environments, a total of 162 significant QTLs were identified for SGC and then integrated into 59 consensus QTLs, of which 32 were novel QTLs. Four QTL hotspot regions (QTL-HRs) for SGC variation were discovered on chromosomes A09, C02, C07 and C09, including seven major QTLs that have previously been reported and four novel major QTLs in addition to HAG1 loci. SGC was largely determined by superimposition of advantage allele in the four QTL-HRs. Important candidate genes directly related to GSL pathways were identified underlying the four QTL-HRs, including BnaC09.MYB28, BnaA09.APK1, BnaC09.SUR1 and BnaC02.GTR2a. Related differentially expressed candidates identified in the minor but environment stable QTLs indicated that sulfur assimilation plays an important rather than dominant role in SGC variation. A potential regulatory model for rapeseed SGC variation constructed by combining candidate GSL gene identification and differentially expressed gene analysis based on RNA-seq contributed to a better understanding of the GSL accumulation mechanism. This study provides insights to further understand the genetic regulatory mechanism of GSLs, as well as the potential loci and a new route to further diminish the SGC in rapeseed.
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Affiliation(s)
- Hongbo Chao
- School of Agricultural Sciences, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Huaixin Li
- Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - Shuxiang Yan
- Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - Weiguo Zhao
- Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China
- Hybrid Rapeseed Research Center of Shaanxi Province, Shaanxi Rapeseed Branch of National Centre for Oil Crops Genetic Improvement, Yangling, 712100, China
| | - Kang Chen
- Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - Hao Wang
- Hybrid Rapeseed Research Center of Shaanxi Province, Shaanxi Rapeseed Branch of National Centre for Oil Crops Genetic Improvement, Yangling, 712100, China
| | - Nadia Raboanatahiry
- Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - Jinyong Huang
- School of Agricultural Sciences, Zhengzhou University, Zhengzhou, 450001, Henan, China.
| | - Maoteng Li
- Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China.
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Gasperl A, Zellnig G, Kocsy G, Müller M. Organelle-specific localization of glutathione in plants grown under different light intensities and spectra. Histochem Cell Biol 2022; 158:213-227. [PMID: 35486180 PMCID: PMC9399215 DOI: 10.1007/s00418-022-02103-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/24/2022] [Indexed: 12/24/2022]
Abstract
Plant ascorbate and glutathione metabolism counteracts oxidative stress mediated, for example, by excess light. In this review, we discuss the properties of immunocytochemistry and transmission electron microscopy, redox-sensitive dyes or probes and bright-field microscopy, confocal microscopy or fluorescence microscopy for the visualization and quantification of glutathione at the cellular or subcellular level in plants and the quantification of glutathione from isolated organelles. In previous studies, we showed that subcellular ascorbate and glutathione levels in Arabidopsis are affected by high light stress. The use of light-emitting diodes (LEDs) is gaining increasing importance in growing indoor crops and ornamental plants. A combination of different LED types allows custom-made combinations of wavelengths and prevents damage related to high photon flux rates. In this review we provide an overview on how different light spectra and light intensities affect glutathione metabolism at the cellular and subcellular levels in plants. Findings obtained in our most recent study demonstrate that both light intensity and spectrum significantly affected glutathione metabolism in wheat at the transcriptional level and caused genotype-specific reactions in the investigated Arabidopsis lines.
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Affiliation(s)
- Anna Gasperl
- Institute of Biology, Plant Sciences, NAWI Graz, University of Graz, 8010 Graz, Austria
| | - Günther Zellnig
- Institute of Biology, Plant Sciences, NAWI Graz, University of Graz, 8010 Graz, Austria
| | - Gábor Kocsy
- Agricultural Institute, Centre for Agricultural Research, Eötvös Loránd Research Network, 2462 Martonvásár, Hungary
| | - Maria Müller
- Institute of Biology, Plant Sciences, NAWI Graz, University of Graz, 8010 Graz, Austria
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Song S, Ge M, Wang W, Gu C, Chen K, Zhang Q, Yu Q, Liu G, Jiang J. BpEIN3.1 represses leaf senescence by inhibiting synthesis of ethylene and abscisic acid in Betula platyphylla. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2022; 321:111330. [PMID: 35696929 DOI: 10.1016/j.plantsci.2022.111330] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2022] [Revised: 05/12/2022] [Accepted: 05/15/2022] [Indexed: 06/15/2023]
Abstract
Leaf senescence and abscission play crucial role in annual plant adapting to seasonal alteration and climate changes by shortening life cycle and development process in response to abiotic and/or biotic stressors underlying phytohormones and environmental signals. Ethylene and abscisic acid are the major phytohormones that promotes leaf senescence, involving various transcription factors, such as EIN3 (ethylene-insensitive 3) and EIL (ethylene-insensitive 3-like) gene family, controlling leaf senescence through metabolite biosynthesis and signal transduction pathways. However, the roles of EIN3 regulating leaf senescence responding to environmental changes in perennial plant, especially forestry tree, remain unclear. In this study, we found that BpEIN3.1 from a subordinated to EIL3 subclade, is a transcription repressor and regulated light-dependent premature leaf senescence in birch (Betula platyphylla). BpEIN3.1 might inhibits the transcription of BpATPS1 by binding to its promoter. Shading suppressed premature leaf senescence in birch ein3.1 mutant line. Ethylene and abscisic acid biosynthesis were also reduced. In addition, abscisic acid positively regulated the expression of BpEIN3.1. This was demonstrated by the hormone-response element analysis of BpEIN3.1 promoter and its gene expression after the hormone treatments. Moreover, our results showed that abscisic acid is also involved in maintaining homeostasis. The molecular mechanism of leaf senescence provides a possibility to increasing wood production by delaying of leaf senescence.
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Affiliation(s)
- Shiyu Song
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | - Mengyan Ge
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | - Wei Wang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | - Chenrui Gu
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | - Kun Chen
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | - Qingzhu Zhang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | - Qibin Yu
- Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, United States
| | - Guifeng Liu
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
| | - Jing Jiang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.
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Light Intensity- and Spectrum-Dependent Redox Regulation of Plant Metabolism. Antioxidants (Basel) 2022; 11:antiox11071311. [PMID: 35883801 PMCID: PMC9312225 DOI: 10.3390/antiox11071311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 06/24/2022] [Accepted: 06/27/2022] [Indexed: 11/29/2022] Open
Abstract
Both light intensity and spectrum (280–800 nm) affect photosynthesis and, consequently, the formation of reactive oxygen species (ROS) during photosynthetic electron transport. ROS, together with antioxidants, determine the redox environment in tissues and cells, which in turn has a major role in the adjustment of metabolism to changes in environmental conditions. This process is very important since there are great spatial (latitude, altitude) and temporal (daily, seasonal) changes in light conditions which are accompanied by fluctuations in temperature, water supply, and biotic stresses. The blue and red spectral regimens are decisive in the regulation of metabolism because of the absorption maximums of chlorophylls and the sensitivity of photoreceptors. Based on recent publications, photoreceptor-controlled transcription factors such as ELONGATED HYPOCOTYL5 (HY5) and changes in the cellular redox environment may have a major role in the coordinated fine-tuning of metabolic processes during changes in light conditions. This review gives an overview of the current knowledge of the light-associated redox control of basic metabolic pathways (carbon, nitrogen, amino acid, sulphur, lipid, and nucleic acid metabolism), secondary metabolism (terpenoids, flavonoids, and alkaloids), and related molecular mechanisms. Light condition-related reprogramming of metabolism is the basis for proper growth and development of plants; therefore, its better understanding can contribute to more efficient crop production in the future.
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Exogenous Selenium Treatment Promotes Glucosinolate and Glucoraphanin Accumulation in Broccoli by Activating Their Biosynthesis and Transport Pathways. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12094101] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Supplementation using selenium (Se) on plants is an effective and widely used approach. It can not only be converted to more Se rich compounds but promote the accumulation of glucosinolates (GSLs) with anti-carcinogenic properties. However, the molecular mechanism of Se in regulating GSLs synthesis remains unclear. In the present study, we analyzed the effects of Se treatment (50 μM sodium selenite) on GSLs, glucoraphanin (4MSOB), and sulforaphane compounds in broccoli tissues. The transcript levels of genes involved in sulfur absorption and transport, GSLs biosynthesis, translocation, and degradation pathways were also evaluated. The study showed that Se treatment remarkably promoted the accumulation of total sulfur and total Se contents and increased Trp-derived GSLs levels in roots by 2 times. The 4MSOB concentration and sulforaphane content in fresh leaves was increased by 67% and 30% after Se treatment, respectively. For genes expressions, some genes involved in sulfate uptake and transporters, GSLs biosynthesis, and transporters were induced strongly upon Se exposure. Results revealed that exogenous Se treatment promotes the overaccumulation of GSLs and 4MSOB content in broccoli by activating the transcript levels of genes involved in sulfur absorption, GSLs biosynthesis, and translocation pathways.
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Wang T, Zhang D, Yang B, Su N, Cui J. Salicylic Acid Regulates Indole-3-Carbinol Biosynthesis Under Blue Light in Broccoli Sprouts ( Brassica oleracea L.). FRONTIERS IN PLANT SCIENCE 2022; 13:848454. [PMID: 35449891 PMCID: PMC9016176 DOI: 10.3389/fpls.2022.848454] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Accepted: 03/14/2022] [Indexed: 06/14/2023]
Abstract
Indole-3-carbinol (I3C), an important secondary metabolite with strong anti-cancer ability, is widely found in cruciferous plants. Light and phytohormones are one of the most important external and internal signals, respectively, that control the growth, development, and secondary metabolism of the plant life cycle. However, there are few studies about the influence of the blue light and salicylic acid (SA) on the regulation of I3C accumulation. In this study, a negative correlation was found between the content of I3C and SA in different species. Among this, broccoli and Arabidopsis thaliana were chosen for further studies. We observed that blue light treatment increased the accumulation of I3C, and exogenous SA treatment significantly inhibited the accumulation of I3C in broccoli sprouts. Based on the RNA sequence, the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that blue light promoted the enrichment of differentially expressed genes (DEGs) in plant hormone signal transduction pathways. More specifically, downregulated expression of genes related to SA biosynthesis and upregulated expression of I3C genes related to metabolic pathway were observed under blue light. Taken together, these results suggested that SA negatively regulates blue light-induced I3C accumulation in broccoli sprouts.
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Affiliation(s)
- Tao Wang
- College of Life Sciences, Nanjing Agricultural University, Nanjing, China
| | - Derui Zhang
- College of Life Sciences, Nanjing Agricultural University, Nanjing, China
| | - Boming Yang
- College of Agriculture, Nanjing Agricultural University, Nanjing, China
| | - Nana Su
- College of Life Sciences, Nanjing Agricultural University, Nanjing, China
| | - Jin Cui
- College of Life Sciences, Nanjing Agricultural University, Nanjing, China
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Tandayu E, Borpatragohain P, Mauleon R, Kretzschmar T. Genome-Wide Association Reveals Trait Loci for Seed Glucosinolate Accumulation in Indian Mustard ( Brassica juncea L.). PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11030364. [PMID: 35161346 PMCID: PMC8838242 DOI: 10.3390/plants11030364] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 01/18/2022] [Accepted: 01/26/2022] [Indexed: 05/05/2023]
Abstract
Glucosinolates (GSLs) are sulphur- and nitrogen-containing secondary metabolites implicated in the fitness of Brassicaceae and appreciated for their pungency and health-conferring properties. In Indian mustard (Brassica juncea L.), GSL content and composition are seed-quality-determining traits affecting its economic value. Depending on the end use, i.e., condiment or oil, different GSL levels constitute breeding targets. The genetic control of GSL accumulation in Indian mustard, however, is poorly understood, and current knowledge of GSL biosynthesis and regulation is largely based on Arabidopsis thaliana. A genome-wide association study was carried out to dissect the genetic architecture of total GSL content and the content of two major GSLs, sinigrin and gluconapin, in a diverse panel of 158 Indian mustard lines, which broadly grouped into a South Asia cluster and outside-South-Asia cluster. Using 14,125 single-nucleotide polymorphisms (SNPs) as genotyping input, seven distinct significant associations were discovered for total GSL content, eight associations for sinigrin content and 19 for gluconapin. Close homologues of known GSL structural and regulatory genes were identified as candidate genes in proximity to peak SNPs. Our results provide a comprehensive map of the genetic control of GLS biosynthesis in Indian mustard, including priority targets for further investigation and molecular marker development.
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Günal S, Kopriva S. Measurement of flux through sulfate assimilation using [35S]sulfate. Methods Enzymol 2022; 676:197-209. [DOI: 10.1016/bs.mie.2022.07.021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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21
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Kim NS, Kim SJ, Jo JS, Lee JG, Lee SI, Kim DH, Kim JA. The BrGI Circadian Clock Gene Is Involved in the Regulation of Glucosinolates in Chinese Cabbage. Genes (Basel) 2021; 12:genes12111664. [PMID: 34828270 PMCID: PMC8621042 DOI: 10.3390/genes12111664] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2021] [Revised: 10/20/2021] [Accepted: 10/21/2021] [Indexed: 11/16/2022] Open
Abstract
Circadian clocks integrate environmental cues with endogenous signals to coordinate physiological outputs. Clock genes in plants are involved in many physiological and developmental processes, such as photosynthesis, stomata opening, stem elongation, light signaling, and floral induction. Many Brassicaceae family plants, including Chinese cabbage (Brassica rapa ssp. pekinensis), produce a unique glucosinolate (GSL) secondary metabolite, which enhances plant protection, facilitates the design of functional foods, and has potential medical applications (e.g., as antidiabetic and anticancer agents). The levels of GSLs change diurnally, suggesting a connection to the circadian clock system. We investigated whether circadian clock genes affect the biosynthesis of GSLs in Brassica rapa using RNAi-mediated suppressed transgenic Brassica rapa GIGENTEA homolog (BrGI knockdown; hereafter GK1) Chinese cabbage. GIGANTEA plays an important role in the plant circadian clock system and is related to various developmental and metabolic processes. Using a validated GK1 transgenic line, we performed RNA sequencing and high-performance liquid chromatography analyses. The transcript levels of many GSL pathway genes were significantly altered in GK1 transgenic plants. In addition, GSL contents were substantially reduced in GK1 transgenic plants. We report that the BrGI circadian clock gene is required for the biosynthesis of GSLs in Chinese cabbage plants.
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Affiliation(s)
- Nan Sun Kim
- Department of Agricultural Biotechnology, National Institute of Agricultural Science, Rural Development Administration, Jeonju 54874, Korea; (N.S.K.); (S.I.L.)
| | - Su Jeong Kim
- Department of Plant Science and Technology, Chung-Ang University, Anseong 17546, Korea;
| | - Jung Su Jo
- Department of Horticulture, College of Agriculture & Life Sciences, Jeonbuk National University, Jeonju 54896, Korea; (J.S.J.); (J.G.L.)
| | - Jun Gu Lee
- Department of Horticulture, College of Agriculture & Life Sciences, Jeonbuk National University, Jeonju 54896, Korea; (J.S.J.); (J.G.L.)
| | - Soo In Lee
- Department of Agricultural Biotechnology, National Institute of Agricultural Science, Rural Development Administration, Jeonju 54874, Korea; (N.S.K.); (S.I.L.)
| | - Dong Hwan Kim
- Department of Plant Science and Technology, Chung-Ang University, Anseong 17546, Korea;
- Correspondence: (D.H.K.); (J.A.K.); Tel.: +82-31-670-3260 (D.H.K.); +82-63-238-4619 (J.A.K.)
| | - Jin A. Kim
- Department of Agricultural Biotechnology, National Institute of Agricultural Science, Rural Development Administration, Jeonju 54874, Korea; (N.S.K.); (S.I.L.)
- Correspondence: (D.H.K.); (J.A.K.); Tel.: +82-31-670-3260 (D.H.K.); +82-63-238-4619 (J.A.K.)
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22
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Zhao Y, Chen Z, Chen J, Chen B, Tang W, Chen X, Lai Z, Guo R. Comparative transcriptomic analyses of glucosinolate metabolic genes during the formation of Chinese kale seeds. BMC PLANT BIOLOGY 2021; 21:394. [PMID: 34418959 PMCID: PMC8380351 DOI: 10.1186/s12870-021-03168-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2020] [Accepted: 08/10/2021] [Indexed: 05/04/2023]
Abstract
BACKGROUND To understand the mechanism of glucosinolates (GSs) accumulation in the specific organs, combined analysis of physiological change and transcriptome sequencing were applied in the current study. Taking Chinese kale as material, seeds and silique walls were divided into different stages based on the development of the embryo in seeds and then subjected to GS analysis and transcriptome sequencing. RESULTS The main GS in seeds of Chinese kale were glucoiberin and gluconapin and their content changed with the development of the seed. During the transition of the embryo from torpedo- to the early cotyledonary-embryo stage, the accumulation of GS in the seed was accompanied by the salient decline of GS in the corresponding silique wall. Thus, the seed and corresponding silique wall at these two stages were subjected to transcriptomic sequencing analysis. 135 genes related to GS metabolism were identified, of which 24 genes were transcription factors, 81 genes were related to biosynthetic pathway, 25 genes encoded catabolic enzymes, and 5 genes matched with transporters. The expression of GS biosynthetic genes was detected both in seeds and silique walls. The high expression of FMOGS-OX and AOP2, which is related to the production of gluconapin by side modification, was noted in seeds at both stages. Interestingly, the expression of GS biosynthetic genes was higher in the silique wall compared with that in the seed albeit lower content of GS existed in the silique wall than in the seed. Combined with the higher expression of transporter genes GTRs in silique walls than in seeds, it was proposed that the transportation of GS from the silique wall to the seed is an important source for seed GS accumulation. In addition, genes related to GS degradation expressed abundantly in the seed at the early cotyledonary-embryo stage indicating its potential role in balancing seed GS content. CONCLUSIONS Two stages including the torpedo-embryo and the early cotyledonary-embryo stage were identified as crucial in GS accumulation during seed development. Moreover, we confirmed the transportation of GS from the silique wall to the seed and proposed possible sidechain modification of GS biosynthesis may exist during seed formation.
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Affiliation(s)
- Yijiao Zhao
- College of Horticulture, Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
| | - Zeyuan Chen
- College of Horticulture, Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
- Joint FAFU-Dalhousie Lab, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
| | - Jiaxuan Chen
- Joint FAFU-Dalhousie Lab, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
| | - Bingxing Chen
- Joint FAFU-Dalhousie Lab, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
| | - Weiling Tang
- College of Horticulture, Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
| | - Xiaodong Chen
- College of Horticulture, Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
| | - Zhongxiong Lai
- College of Horticulture, Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
| | - Rongfang Guo
- College of Horticulture, Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
- Joint FAFU-Dalhousie Lab, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, 350002 China
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Jiménez A, Sevilla F, Martí MC. Reactive oxygen species homeostasis and circadian rhythms in plants. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:5825-5840. [PMID: 34270727 DOI: 10.1093/jxb/erab318] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2021] [Accepted: 07/15/2021] [Indexed: 06/13/2023]
Abstract
Elucidation of the molecular mechanisms by which plants sense and respond to environmental stimuli that influence their growth and yield is a prerequisite for understanding the adaptation of plants to climate change. Plants are sessile organisms and one important factor for their successful acclimation is the temporal coordination of the 24 h daily cycles and the stress response. The crosstalk between second messengers, such as Ca2+, reactive oxygen species (ROS), and hormones is a fundamental aspect in plant adaptation and survival under environmental stresses. In this sense, the circadian clock, in conjunction with Ca2+- and hormone-signalling pathways, appears to act as an important mechanism controlling plant adaptation to stress. The relationship between the circadian clock and ROS-generating and ROS-scavenging mechanisms is still not fully understood, especially at the post-transcriptional level and in stress situations in which ROS levels increase and changes in cell redox state occur. In this review, we summarize the information regarding the relationship between the circadian clock and the ROS homeostasis network. We pay special attention not only to the transcriptional regulation of ROS-generating and ROS-scavenging enzymes, but also to the few studies that have been performed at the biochemical level and those conducted under stress conditions.
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Affiliation(s)
- Ana Jiménez
- Abiotic Stress, Production and Quality Laboratory, Department of Stress Biology and Plant Pathology, Centre of Edaphology and Applied Biology of Segura (CEBAS-CSIC), Murcia, Spain
| | - Francisca Sevilla
- Abiotic Stress, Production and Quality Laboratory, Department of Stress Biology and Plant Pathology, Centre of Edaphology and Applied Biology of Segura (CEBAS-CSIC), Murcia, Spain
| | - María Carmen Martí
- Abiotic Stress, Production and Quality Laboratory, Department of Stress Biology and Plant Pathology, Centre of Edaphology and Applied Biology of Segura (CEBAS-CSIC), Murcia, Spain
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Frerigmann H, Hoecker U, Gigolashvili T. New Insights on the Regulation of Glucosinolate Biosynthesis via COP1 and DELLA Proteins in Arabidopsis Thaliana. FRONTIERS IN PLANT SCIENCE 2021; 12:680255. [PMID: 34276733 PMCID: PMC8281118 DOI: 10.3389/fpls.2021.680255] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/13/2021] [Accepted: 05/27/2021] [Indexed: 06/13/2023]
Abstract
The biosynthesis of defensive secondary metabolites, such as glucosinolates (GSLs), is a costly process, which requires nutrients, ATP, and reduction equivalents, and, therefore, needs well-orchestrated machinery while coordinating defense and growth. We discovered that the key repressor of light signaling, the CONSTITUTIVE PHOTOMORPHOGENIC 1/SUPPRESSOR OF PHYTOCHROME A-105 (COP1/SPA) complex, is a crucial component of GSL biosynthesis regulation. Various mutants in this COP1/SPA complex exhibited a strongly reduced level of GSL and a low expression of jasmonate (JA)-dependent genes. Furthermore, cop1, which is known to accumulate DELLA proteins in the dark, shows reduced gibberellin (GA) and JA signaling, thereby phenocopying other DELLA-accumulating mutants. This phenotype can be complemented by a dominant gain-of-function allele of MYC3 and by crossing with a mutant having low DELLA protein levels. Hence, SPA1 interacts with DELLA proteins in a yeast two-hybrid screen, whereas high levels of DELLA inhibit MYC function and suppress JA signaling. DELLA accumulation leads to reduced synthesis of GSL and inhibited growth. Thus, the COP1/SPA-mediated degradation of DELLA not only affects growth but also regulates the biosynthesis of GSLs.
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Affiliation(s)
- Henning Frerigmann
- Department of Plant-Microbe Interactions and Cluster of Excellence on Plant Sciences, Max Planck Institute for Plant Breeding Research, Cologne, Germany
| | - Ute Hoecker
- BioCenter, Botanical Institute and Cluster of Excellence on Plant Sciences, University of Cologne, Cologne, Germany
| | - Tamara Gigolashvili
- BioCenter, Botanical Institute and Cluster of Excellence on Plant Sciences, University of Cologne, Cologne, Germany
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Chorol S, Angchok D, Stobdan T. Irrigation timing as a glucosinolate alteration factor in radish (Raphanus sativus L.) (Gya Labuk and Tsentay Labuk) in the Indian Trans-Himalayan region of Ladakh. J Food Compost Anal 2021. [DOI: 10.1016/j.jfca.2021.103904] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Casajús V, Civello P, Martínez G, Howe K, Fish T, Yang Y, Thannhauser T, Li L, Gómez Lobato M. Effect of continuous white light illumination on glucosinolate metabolism during postharvest storage of broccoli. Lebensm Wiss Technol 2021. [DOI: 10.1016/j.lwt.2021.111302] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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Liu Z, Wang H, Xie J, Lv J, Zhang G, Hu L, Luo S, Li L, Yu J. The Roles of Cruciferae Glucosinolates in Disease and Pest Resistance. PLANTS 2021; 10:plants10061097. [PMID: 34070720 PMCID: PMC8229868 DOI: 10.3390/plants10061097] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Revised: 05/19/2021] [Accepted: 05/21/2021] [Indexed: 12/17/2022]
Abstract
With the expansion of the area under Cruciferae vegetable cultivation, and an increase in the incidence of natural threats such as pests and diseases globally, Cruciferae vegetable losses caused by pathogens, insects, and pests are on the rise. As one of the key metabolites produced by Cruciferae vegetables, glucosinolate (GLS) is not only an indicator of their quality but also controls infestation by numerous fungi, bacteria, aphids, and worms. Today, the safe and pollution-free production of vegetables is advocated globally, and environmentally friendly pest and disease control strategies, such as biological control, to minimize the adverse impacts of pathogen and insect pest stress on Cruciferae vegetables, have attracted the attention of researchers. This review explores the mechanisms via which GLS acts as a defensive substance, participates in responses to biotic stress, and enhances plant tolerance to the various stress factors. According to the current research status, future research directions are also proposed.
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Affiliation(s)
- Zeci Liu
- Gansu Provincial Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou 730070, China;
- College of Horticulture, Gansu Agriculture University, Lanzhou 730070, China; (H.W.); (J.X.); (J.L.); (G.Z.); (L.H.); (S.L.); (L.L.)
| | - Huiping Wang
- College of Horticulture, Gansu Agriculture University, Lanzhou 730070, China; (H.W.); (J.X.); (J.L.); (G.Z.); (L.H.); (S.L.); (L.L.)
| | - Jianming Xie
- College of Horticulture, Gansu Agriculture University, Lanzhou 730070, China; (H.W.); (J.X.); (J.L.); (G.Z.); (L.H.); (S.L.); (L.L.)
| | - Jian Lv
- College of Horticulture, Gansu Agriculture University, Lanzhou 730070, China; (H.W.); (J.X.); (J.L.); (G.Z.); (L.H.); (S.L.); (L.L.)
| | - Guobin Zhang
- College of Horticulture, Gansu Agriculture University, Lanzhou 730070, China; (H.W.); (J.X.); (J.L.); (G.Z.); (L.H.); (S.L.); (L.L.)
| | - Linli Hu
- College of Horticulture, Gansu Agriculture University, Lanzhou 730070, China; (H.W.); (J.X.); (J.L.); (G.Z.); (L.H.); (S.L.); (L.L.)
| | - Shilei Luo
- College of Horticulture, Gansu Agriculture University, Lanzhou 730070, China; (H.W.); (J.X.); (J.L.); (G.Z.); (L.H.); (S.L.); (L.L.)
| | - Lushan Li
- College of Horticulture, Gansu Agriculture University, Lanzhou 730070, China; (H.W.); (J.X.); (J.L.); (G.Z.); (L.H.); (S.L.); (L.L.)
- Panzhihua Academy of Agricultural and Forestry Sciences, Panzhihua 617000, China
| | - Jihua Yu
- Gansu Provincial Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou 730070, China;
- College of Horticulture, Gansu Agriculture University, Lanzhou 730070, China; (H.W.); (J.X.); (J.L.); (G.Z.); (L.H.); (S.L.); (L.L.)
- Correspondence: ; Tel.: +86-931-763-2188
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Mølmann JA, Hansen E, Johansen TJ. Effects of supplemental LED light quality and reduced growth temperature on swede (Brassica napus L. ssp. rapifera Metzg.) root vegetable development and contents of glucosinolates and sugars. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2021; 101:2422-2427. [PMID: 33011991 DOI: 10.1002/jsfa.10866] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Revised: 10/01/2020] [Accepted: 10/04/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Low growth temperatures and the special light qualities of midnight sun in northern Scandinavia, have both been shown to improve eating quality of swede root bulbs. To study the combined effect of these factors on root development and sensory-related compounds, plants were grown in phytotron under different 24 h supplemental light-emitting diode (LED) light colours, at constant 15 °C, or reduced end-of-season temperature at 9 °C. RESULTS Far-red LED (740 nm) light induced longer leaves and produced more roundly shaped bulbs, than the other light quality treatments. At constant 15 °C, supplemental light of far-red LED also produced a stronger purple crown skin colour than the other LED treatments. This difference between light quality treatments disappeared at 9 °C, as all bulb crowns developed a purple colour. There were no significant effects of LED-supplements on sugar concentrations, while the reduced temperature on average did increase concentrations of d-fructose and d-glucose. Total glucosinolate concentrations were not different among treatments, although the most abundant glucosinolate, progoitrin, on average was present in highest concentration under LEDs containing far-red light, and in lower concentration at 9 °C compared to 15 °C. CONCLUSION The light quality of 24 h photoperiods in combination with temperature appears primarily important for growth and morphological traits in swede root bulbs. Influence of light quality and low temperature on appearance and sensory-related compounds may be utilized in marketing of root vegetables with special quality related to growth conditions of high latitude origin. © 2020 Society of Chemical Industry.
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Affiliation(s)
- Jørgen Ab Mølmann
- Department of Horticulture, Division of Food Production and Society, Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
| | - Espen Hansen
- Marbio, The Norwegian College of Fishery Science, UiT - The Arctic University of Norway, Tromsø, Norway
| | - Tor J Johansen
- Department of Invertebrate Pests and Weeds in Forestry, Agriculture and Horticulture, Division of Biotechnology and Plant Health, Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
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Francisco M, Kliebenstein DJ, Rodríguez VM, Soengas P, Abilleira R, Cartea ME. Fine mapping identifies NAD-ME1 as a candidate underlying a major locus controlling temporal variation in primary and specialized metabolism in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 106:454-467. [PMID: 33523525 DOI: 10.1111/tpj.15178] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Accepted: 01/19/2021] [Indexed: 05/23/2023]
Abstract
Plant metabolism is modulated by a complex interplay between internal signals and external cues. A major goal of all quantitative metabolomic studies is to clone the underlying genes to understand the mechanistic basis of this variation. Using fine-scale genetic mapping, in this work we report the identification and initial characterization of NAD-DEPENDENT MALIC ENZYME 1 (NAD-ME1) as the candidate gene underlying the pleiotropic network Met.II.15 quantitative trait locus controlling variation in plant metabolism and circadian clock outputs in the Bay × Sha Arabidopsis population. Transcript abundance and promoter analysis in NAD-ME1Bay-0 and NAD-ME1Sha alleles confirmed allele-specific expression that appears to be due a polymorphism disrupting a putative circadian cis-element binding site. Analysis of transfer DNA insertion lines and heterogeneous inbred families showed that transcript variation of the NAD-ME1 gene led to temporal shifts of tricarboxylic acid cycle intermediates, glucosinolate (GSL) accumulation, and altered regulation of several GSL biosynthesis pathway genes. Untargeted metabolomic analyses revealed complex regulatory networks of NAD-ME1 dependent upon the daytime. The mutant led to shifts in plant primary metabolites, cell wall components, isoprenoids, fatty acids, and plant immunity phytochemicals, among others. Our findings suggest that NAD-ME1 may act as a key gene to coordinate plant primary and secondary metabolism in a time-dependent manner.
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Affiliation(s)
- Marta Francisco
- Misión Biológica de Galicia (MBG-CSIC), P.O. Box 28, Pontevedra, 36080, Spain
| | - Daniel J Kliebenstein
- Department of Plant Sciences, University of California at Davis, Davis, CA, 95616, USA
- DynaMo Center of Excellence, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C, DK-1871, Denmark
| | - Víctor M Rodríguez
- Misión Biológica de Galicia (MBG-CSIC), P.O. Box 28, Pontevedra, 36080, Spain
| | - Pilar Soengas
- Misión Biológica de Galicia (MBG-CSIC), P.O. Box 28, Pontevedra, 36080, Spain
| | - Rosaura Abilleira
- Misión Biológica de Galicia (MBG-CSIC), P.O. Box 28, Pontevedra, 36080, Spain
| | - María E Cartea
- Misión Biológica de Galicia (MBG-CSIC), P.O. Box 28, Pontevedra, 36080, Spain
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Wang J, Mao S, Wu Q, Yuan Y, Liang M, Wang S, Huang K, Wu Q. Effects of LED illumination spectra on glucosinolate and sulforaphane accumulation in broccoli seedlings. Food Chem 2021; 356:129550. [PMID: 33819785 DOI: 10.1016/j.foodchem.2021.129550] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Revised: 03/02/2021] [Accepted: 03/04/2021] [Indexed: 10/21/2022]
Abstract
Glucosinolates (GSLs) are well known for plant defense and human nutrition. In this study, broccoli seedlings were illuminated under different LED light, including white, red, blue, and 75% red + 25% blue (200 mmol·m-2·s-1) for 4 weeks to investigate the effects of LED light on GSLs and sulforaphane biosynthesis. Results showed that red light promoted GSL biosynthesis and sulforaphane accumulation because red light could induce SOT18 expression to advance aliphatic GSLs biosynthesis, whereas the high tryptophan content and the upregulation of CYP79B2, CYP79B3, and CYP83B1 were attributed to indole GSL biosynthesis. Low-level methionine content and downregulated SOT18 were the main factors inhibiting GSLs and sulforaphane accumulation under blue LED illumination. BoHY5 gene expression was induced significantly and the yeast one-hybrid assay demonstrated BoHY5 could bind to SOT18 promoter. Consequently, BoHY5 inhibited SOT18 expression, and played a negative role in the GSL biosynthetic network.
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Affiliation(s)
- Junwei Wang
- College of Horticulture, Hunan Agricultural University, Changsha, PR China; Engineering Research Center for Horticultural Crop Germplasm Creation and New Variety Breeding, Ministry of Education, Changsha, PR China; Key Labortory for Vegetable Biology of Hunan Province, Changsha, PR China
| | - Shuxiang Mao
- College of Horticulture, Hunan Agricultural University, Changsha, PR China; Engineering Research Center for Horticultural Crop Germplasm Creation and New Variety Breeding, Ministry of Education, Changsha, PR China; Key Labortory for Vegetable Biology of Hunan Province, Changsha, PR China
| | - Qi Wu
- College of Horticulture, Hunan Agricultural University, Changsha, PR China; Engineering Research Center for Horticultural Crop Germplasm Creation and New Variety Breeding, Ministry of Education, Changsha, PR China; Key Labortory for Vegetable Biology of Hunan Province, Changsha, PR China
| | - Yiming Yuan
- College of Horticulture, Hunan Agricultural University, Changsha, PR China; Engineering Research Center for Horticultural Crop Germplasm Creation and New Variety Breeding, Ministry of Education, Changsha, PR China; Key Labortory for Vegetable Biology of Hunan Province, Changsha, PR China
| | - Mantian Liang
- College of Horticulture, Hunan Agricultural University, Changsha, PR China; Engineering Research Center for Horticultural Crop Germplasm Creation and New Variety Breeding, Ministry of Education, Changsha, PR China; Key Labortory for Vegetable Biology of Hunan Province, Changsha, PR China
| | - Shengze Wang
- College of Horticulture, Hunan Agricultural University, Changsha, PR China; Engineering Research Center for Horticultural Crop Germplasm Creation and New Variety Breeding, Ministry of Education, Changsha, PR China; Key Labortory for Vegetable Biology of Hunan Province, Changsha, PR China
| | - Ke Huang
- College of Horticulture, Hunan Agricultural University, Changsha, PR China; Engineering Research Center for Horticultural Crop Germplasm Creation and New Variety Breeding, Ministry of Education, Changsha, PR China; Key Labortory for Vegetable Biology of Hunan Province, Changsha, PR China
| | - Qiuyun Wu
- College of Horticulture, Hunan Agricultural University, Changsha, PR China; Engineering Research Center for Horticultural Crop Germplasm Creation and New Variety Breeding, Ministry of Education, Changsha, PR China; Key Labortory for Vegetable Biology of Hunan Province, Changsha, PR China.
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Quantitative Proteomics and Phosphoproteomics Support a Role for Mut9-Like Kinases in Multiple Metabolic and Signaling Pathways in Arabidopsis. Mol Cell Proteomics 2021; 20:100063. [PMID: 33677124 PMCID: PMC8066427 DOI: 10.1016/j.mcpro.2021.100063] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2020] [Revised: 01/14/2021] [Accepted: 02/05/2021] [Indexed: 11/27/2022] Open
Abstract
Protein phosphorylation is one of the most prevalent posttranslational modifications found in eukaryotic systems. It serves as a key molecular mechanism that regulates protein function in response to environmental stimuli. The Mut9-like kinases (MLKs) are a plant-specific family of Ser/Thr kinases linked to light, circadian, and abiotic stress signaling. Here we use quantitative phosphoproteomics in conjunction with global proteomic analysis to explore the role of the MLKs in daily protein dynamics. Proteins involved in light, circadian, and hormone signaling, as well as several chromatin-modifying enzymes and DNA damage response factors, were found to have altered phosphorylation profiles in the absence of MLK family kinases. In addition to altered phosphorylation levels, mlk mutant seedlings have an increase in glucosinolate metabolism enzymes. Subsequently, we show that a functional consequence of the changes to the proteome and phosphoproteome in mlk mutant plants is elevated glucosinolate accumulation and increased sensitivity to DNA damaging agents. Combined with previous reports, this work supports the involvement of MLKs in a diverse set of stress responses and developmental processes, suggesting that the MLKs serve as key regulators linking environmental inputs to developmental outputs. MUT9-LIKE KINASE mutant quantitative proteome and phosphoproteome measured. Changes to proteome and phosphoproteome are specific to genotype and environment. Loss of MLKs alters glucosinolate enzyme abundance and metabolism. Loss of MLKs increases plant sensitivity to UV radiation and DNA damage agents.
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Mitreiter S, Gigolashvili T. Regulation of glucosinolate biosynthesis. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:70-91. [PMID: 33313802 DOI: 10.1093/jxb/eraa479] [Citation(s) in RCA: 53] [Impact Index Per Article: 17.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Accepted: 10/14/2020] [Indexed: 05/18/2023]
Abstract
Glucosinolates are secondary defense metabolites produced by plants of the order Brassicales, which includes the model species Arabidopsis and many crop species. In the past 13 years, the regulation of glucosinolate synthesis in plants has been intensively studied, with recent research revealing complex molecular mechanisms that connect glucosinolate production with responses to other central pathways. In this review, we discuss how the regulation of glucosinolate biosynthesis is ecologically relevant for plants, how it is controlled by transcription factors, and how this transcriptional machinery interacts with hormonal, environmental, and epigenetic mechanisms. We present the central players in glucosinolate regulation, MYB and basic helix-loop-helix transcription factors, as well as the plant hormone jasmonate, which together with other hormones and environmental signals allow the coordinated and rapid regulation of glucosinolate genes. Furthermore, we highlight the regulatory connections between glucosinolates, auxin, and sulfur metabolism and discuss emerging insights and open questions on the regulation of glucosinolate biosynthesis.
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Affiliation(s)
- Simon Mitreiter
- Institute for Plant Sciences and Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne, Germany
| | - Tamara Gigolashvili
- Institute for Plant Sciences and Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne, Germany
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Bell L, Chadwick M, Puranik M, Tudor R, Methven L, Kennedy S, Wagstaff C. The Eruca sativa Genome and Transcriptome: A Targeted Analysis of Sulfur Metabolism and Glucosinolate Biosynthesis Pre and Postharvest. FRONTIERS IN PLANT SCIENCE 2020; 11:525102. [PMID: 33193472 PMCID: PMC7652772 DOI: 10.3389/fpls.2020.525102] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/07/2020] [Accepted: 09/30/2020] [Indexed: 06/11/2023]
Abstract
Rocket (Eruca sativa) is a source of health-related metabolites called glucosinolates (GSLs) and isothiocyanates (ITCs) but little is known of the genetic and transcriptomic mechanisms responsible for regulating pre and postharvest accumulations. We present the first de novo reference genome assembly and annotation, with ontogenic and postharvest transcriptome data relating to sulfur assimilation, transport, and utilization. Diverse gene expression patterns related to sulfur metabolism, GSL biosynthesis, and glutathione biosynthesis are present between inbred lines of rocket. A clear pattern of differential expression determines GSL abundance and the formation of hydrolysis products. One breeding line sustained GSL accumulation and hydrolysis product formation throughout storage. Multiple copies of MYB28, SLIM1, SDI1, and ESM1 have increased and differential expression postharvest, and are associated with GSLs and hydrolysis product formation. Two glucosinolate transporter gene (GTR2) copies were found to be associated with increased GSL accumulations in leaves. Monosaccharides (which are essential for primary metabolism and GSL biosynthesis, and contribute to the taste of rocket) were also quantified in leaves, with glucose concentrations significantly correlated with the expression of numerous GSL-related genes. Significant negative correlations were observed between the expression of glutathione synthetase (GSH) genes and those involved in GSL metabolism. Breeding line "B" showed increased GSH gene expression and low GSL content compared to two other lines where the opposite was observed. Co-expression analysis revealed senescence (SEN1) and oxidative stress-related (OXS3) genes have higher expression in line B, suggesting that postharvest deterioration is associated with low GSL concentrations.
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Affiliation(s)
- Luke Bell
- School of Agriculture, Policy and Development, University of Reading, Reading, United Kingdom
| | - Martin Chadwick
- School of Chemistry Food and Pharmacy, University of Reading, Reading, United Kingdom
| | - Manik Puranik
- School of Chemistry Food and Pharmacy, University of Reading, Reading, United Kingdom
| | | | - Lisa Methven
- School of Chemistry Food and Pharmacy, University of Reading, Reading, United Kingdom
| | | | - Carol Wagstaff
- School of Chemistry Food and Pharmacy, University of Reading, Reading, United Kingdom
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Harvesting at different time-points of day affects glucosinolate metabolism during postharvest storage of broccoli. Food Res Int 2020; 136:109529. [DOI: 10.1016/j.foodres.2020.109529] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Revised: 05/07/2020] [Accepted: 07/08/2020] [Indexed: 11/23/2022]
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Ilahy R, Tlili I, Pék Z, Montefusco A, Siddiqui MW, Homa F, Hdider C, R'Him T, Lajos H, Lenucci MS. Pre- and Post-harvest Factors Affecting Glucosinolate Content in Broccoli. Front Nutr 2020; 7:147. [PMID: 33015121 PMCID: PMC7511755 DOI: 10.3389/fnut.2020.00147] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 07/23/2020] [Indexed: 12/01/2022] Open
Abstract
Owing to several presumed health-promoting biological activities, increased attention is being given to natural plant chemicals, especially those frequently entering the human diet. Glucosinolates (GLs) are the main bioactive compounds found in broccoli (Brassica oleracea L. var. italica Plenck). Their regular dietary assumption has been correlated with reduced risk of various types of neoplasms (lung, colon, pancreatic, breast, bladder, and prostate cancers), some degenerative diseases, such as Alzheimer's, and decreased incidence of cardiovascular pathologies. GL's synthesis pathway and regulation mechanism have been elucidated mainly in Arabidopsis. However, nearly 56 putative genes have been identified as involved in the B. oleracea GL pathway. It is widely recognized that there are several pre-harvest (genotype, growing environment, cultural practices, ripening stage, etc.) and post-harvest (harvesting, post-harvest treatments, packaging, storage, etc.) factors that affect GL synthesis, profiles, and levels in broccoli. Understanding how these factors act and interact in driving GL accumulation in the edible parts is essential for developing new broccoli cultivars with improved health-promoting bioactivity. In this regard, any systematic and comprehensive review outlining the effects of pre- and post-harvest factors on the accumulation of GLs in broccoli is not yet available. Thus, the goal of this paper is to fill this gap by giving a synoptic overview of the most relevant and recent literature. The existence of substantial cultivar-to-cultivar variation in GL content in response to pre-harvest factors and post-harvest manipulations has been highlighted and discussed. The paper also stresses the need for adapting particular pre- and post-harvest procedures for each particular genotype in order to maintain nutritious, fresh-like quality throughout the broccoli value chain.
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Affiliation(s)
- Riadh Ilahy
- Laboratory of Horticulture, National Agricultural Research Institute of Tunisia (INRAT), University of Carthage, Tunis, Tunisia
| | - Imen Tlili
- Laboratory of Horticulture, National Agricultural Research Institute of Tunisia (INRAT), University of Carthage, Tunis, Tunisia
| | - Zoltán Pék
- Laboratory of Horticulture, Faculty of Agricultural and Environmental Sciences, Horticultural Institute, Szent István University, Budapest, Hungary
| | - Anna Montefusco
- Dipartimento di Scienze e Tecnologie Biologiche ed Ambientali, Università del Salento (DiSTeBA), Lecce, Italy
| | - Mohammed Wasim Siddiqui
- Department of Food Science and Postharvest Technology, Bihar Agricultural University, Bhagalpur, India
| | - Fozia Homa
- Department of Statistics, Mathematics, and Computer Application, Bihar Agricultural University, Bhagalpur, India
| | - Chafik Hdider
- Laboratory of Horticulture, National Agricultural Research Institute of Tunisia (INRAT), University of Carthage, Tunis, Tunisia
| | - Thouraya R'Him
- Laboratory of Horticulture, National Agricultural Research Institute of Tunisia (INRAT), University of Carthage, Tunis, Tunisia
| | - Helyes Lajos
- Laboratory of Horticulture, Faculty of Agricultural and Environmental Sciences, Horticultural Institute, Szent István University, Budapest, Hungary
| | - Marcello Salvatore Lenucci
- Dipartimento di Scienze e Tecnologie Biologiche ed Ambientali, Università del Salento (DiSTeBA), Lecce, Italy
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Maina S, Misinzo G, Bakari G, Kim HY. Human, Animal and Plant Health Benefits of Glucosinolates and Strategies for Enhanced Bioactivity: A Systematic Review. Molecules 2020; 25:E3682. [PMID: 32806771 PMCID: PMC7464879 DOI: 10.3390/molecules25163682] [Citation(s) in RCA: 41] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Revised: 08/08/2020] [Accepted: 08/10/2020] [Indexed: 12/14/2022] Open
Abstract
Glucosinolates (GSs) are common anionic plant secondary metabolites in the order Brassicales. Together with glucosinolate hydrolysis products (GSHPs), they have recently gained much attention due to their biological activities and mechanisms of action. We review herein the health benefits of GSs/GSHPs, approaches to improve the plant contents, their bioavailability and bioactivity. In this review, only literature published between 2010 and March 2020 was retrieved from various scientific databases. Findings indicate that these compounds (natural, pure, synthetic, and derivatives) play an important role in human/animal health (disease therapy and prevention), plant health (defense chemicals, biofumigants/biocides), and food industries (preservatives). Overall, much interest is focused on in vitro studies as anti-cancer and antimicrobial agents. GS/GSHP levels improvement in plants utilizes mostly biotic/abiotic stresses and short periods of phytohormone application. Their availability and bioactivity are directly proportional to their contents at the source, which is affected by methods of food preparation, processing, and extraction. This review concludes that, to a greater extent, there is a need to explore and improve GS-rich sources, which should be emphasized to obtain natural bioactive compounds/active ingredients that can be included among synthetic and commercial products for use in maintaining and promoting health. Furthermore, the development of advanced research on compounds pharmacokinetics, their molecular mode of action, genetics based on biosynthesis, their uses in promoting the health of living organisms is highlighted.
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Affiliation(s)
- Sylvia Maina
- Smart Farm Research Center, Korea Institute of Science and Technology (KIST), Gangneung, Gangwon 25451, Korea;
- College of Veterinary Medicine and Biomedical Sciences, Sokoine University of Agriculture, Morogoro 25523, Tanzania; (G.M.); (G.B.)
- SACIDS Africa Centre of Excellence for Infectious Diseases, Sokoine University of Agriculture, Morogoro 25523, Tanzania
| | - Gerald Misinzo
- College of Veterinary Medicine and Biomedical Sciences, Sokoine University of Agriculture, Morogoro 25523, Tanzania; (G.M.); (G.B.)
- SACIDS Africa Centre of Excellence for Infectious Diseases, Sokoine University of Agriculture, Morogoro 25523, Tanzania
| | - Gaymary Bakari
- College of Veterinary Medicine and Biomedical Sciences, Sokoine University of Agriculture, Morogoro 25523, Tanzania; (G.M.); (G.B.)
| | - Ho-Youn Kim
- Smart Farm Research Center, Korea Institute of Science and Technology (KIST), Gangneung, Gangwon 25451, Korea;
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Li M, Xie F, Li J, Sun B, Luo Y, Zhang Y, Chen Q, Wang Y, Zhang F, Zhang Y, Lin Y, Wang X, Tang H. Tumorous Stem Development of Brassica Juncea: A Complex Regulatory Network of Stem Formation and Identification of Key Genes in Glucosinolate Biosynthesis. PLANTS (BASEL, SWITZERLAND) 2020; 9:E1006. [PMID: 32784853 PMCID: PMC7466272 DOI: 10.3390/plants9081006] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/13/2020] [Revised: 07/31/2020] [Accepted: 08/06/2020] [Indexed: 11/16/2022]
Abstract
Stem mustard is a stem variety of mustard, an important Brassica vegetable. The formation and development of the tumorous stem, which is the key organ for the direct yield and quality, is a complex biological process involving morphogenesis, material accumulation and gene regulation. In this study, we demonstrated through anatomical studies that stem swelling is mainly dependent on the increase in the number of cells and the volume of parenchyma cells in the cortex and pith. To further understand transcript and metabolic changes during stem swelling, we obtained 27,901 differentially expressed genes, of which 671 were specifically detected using transcriptome sequencing technology in all four stages of stem swelling. Functional annotation identified enrichment for genes involved in photosynthesis, energy metabolism, cell growth, sulfur metabolism and glucosinolate biosynthesis. Glucosinolates are a group of nitrogen- and sulfur-containing secondary metabolites, which largely exist in the Cruciferous vegetables. HPLC analysis of the contents and components of glucosinolates in four different stem development stages revealed eight glucosinolates, namely, three aliphatic glucosinolates (sinigrin, glucoalyssin and gluconapin), four indole glucosinolates (4-hydroxyglucobrassicin, glucobrassicin, 4-methoxyglucobrassicin and neoglucobrassicin) and one aromatic glucosinolate (gluconasturtiin). All these types of glucosinolates showed a significant downward trend during the stem swelling period. The content of aliphatic glucosinolates was the highest, with sinigrin being the main component. In addition, qPCR was used to validate the expression of nine genes involved in glucosinolate biosynthesis. Most of these genes were down-regulated during stem swelling in qPCR, which is consistent with transcriptome data. These data provide a basic resource for further molecular and genetic research on Brassica juncea.
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Affiliation(s)
- Mengyao Li
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
| | - Fangjie Xie
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
| | - Jie Li
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
| | - Bo Sun
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
| | - Ya Luo
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
| | - Yong Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
| | - Qing Chen
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
| | - Yan Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
- Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Fen Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
| | - Yunting Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
- Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Yuanxiu Lin
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
- Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Xiaorong Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
- Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Haoru Tang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (M.L.); (F.X.); (J.L.); (B.S.); (Y.L.); (Y.Z.); (Q.C.); (Y.W.); (F.Z.); (Y.Z.); (Y.L.); (X.W.)
- Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu 611130, China
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Fernández-Calvo P, Iñigo S, Glauser G, Vanden Bossche R, Tang M, Li B, De Clercq R, Nagels Durand A, Eeckhout D, Gevaert K, De Jaeger G, Brady SM, Kliebenstein DJ, Pauwels L, Goossens A, Ritter A. FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes. THE NEW PHYTOLOGIST 2020; 227:1124-1137. [PMID: 32266972 DOI: 10.1111/nph.16586] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Accepted: 03/25/2020] [Indexed: 05/24/2023]
Abstract
The sessile lifestyle of plants requires accurate physiology adjustments to be able to thrive in a changing environment. Plants integrate environmental timing signals to control developmental and stress responses. Here, we identified Far1 Related Sequence (FRS) 7 and FRS12, two transcriptional repressors that accumulate in short-day conditions, as regulators of Arabidopsis glucosinolate (GSL) biosynthesis. Loss of function of FRS7 and FRS12 results in plants with increased amplitudes of diurnal expression of GSL pathway genes. Protein interaction analyses revealed that FRS7 and FRS12 recruit the NOVEL INTERACTOR OF JAZ (NINJA) to assemble a transcriptional repressor complex. Genetic and molecular evidence demonstrated that FRS7, FRS12 and NINJA jointly regulate the expression of GSL biosynthetic genes, and thus constitute a molecular mechanism that modulates specialized metabolite accumulation.
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Affiliation(s)
- Patricia Fernández-Calvo
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
| | - Sabrina Iñigo
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
| | - Gaétan Glauser
- Neuchâtel Platform of Analytical Chemistry, University of Neuchâtel, Avenue de Bellevaux 51, 2000, Neuchâtel, Switzerland
| | - Robin Vanden Bossche
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
| | - Michelle Tang
- Department of Plant Sciences, University of California, Davis, CA, 95616, USA
- Graduate Group in Plant Biology, University of California, Davis, CA, 95616, USA
| | - Baohua Li
- Department of Plant Sciences, University of California, Davis, CA, 95616, USA
| | - Rebecca De Clercq
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
| | - Astrid Nagels Durand
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
| | - Dominique Eeckhout
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
| | - Kris Gevaert
- Department of Biomolecular Medicine, Ghent University, Albert Baertsoenkaai 3, B-9000, Ghent, Belgium
- VIB Center for Medical Biotechnology, Albert Baertsoenkaai 3, B-9000, Ghent, Belgium
| | - Geert De Jaeger
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
| | - Siobhan M Brady
- Department of Plant Biology and Genome Center, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Daniel J Kliebenstein
- Department of Plant Sciences, University of California, Davis, CA, 95616, USA
- DynaMo Center of Excellence, University of Copenhagen, DK-1871, Frederiksberg C, Denmark
| | - Laurens Pauwels
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
| | - Alain Goossens
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
| | - Andrés Ritter
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052, Ghent, Belgium
- VIB Center for Plant Systems Biology, Technologiepark 71, B-9052, Ghent, Belgium
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Harun S, Abdullah-Zawawi MR, Goh HH, Mohamed-Hussein ZA. A Comprehensive Gene Inventory for Glucosinolate Biosynthetic Pathway in Arabidopsis thaliana. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:7281-7297. [PMID: 32551569 DOI: 10.1021/acs.jafc.0c01916] [Citation(s) in RCA: 47] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Glucosinolates (GSLs) are plant secondary metabolites comprising sulfur and nitrogen mainly found in plants from the order of Brassicales, such as broccoli, cabbage, and Arabidopsis thaliana. The activated forms of GSL play important roles in fighting against pathogens and have health benefits to humans. The increasing amount of data on A. thaliana generated from various omics technologies can be investigated more deeply in search of new genes or compounds involved in GSL biosynthesis and metabolism. This review describes a comprehensive inventory of A. thaliana GSLs identified from published literature and databases such as KNApSAcK, KEGG, and AraCyc. A total of 113 GSL genes encoding for 23 transcription components, 85 enzymes, and five protein transporters were experimentally characterized in the past two decades. Continuous efforts are still on going to identify all molecules related to the production of GSLs. A manually curated database known as SuCCombase (http://plant-scc.org) was developed to serve as a comprehensive GSL inventory. Realizing lack of information on the regulation of GSL biosynthesis and degradation mechanisms, this review also includes relevant information and their connections with crosstalk among various factors, such as light, sulfur metabolism, and nitrogen metabolism, not only in A. thaliana but also in other crucifers.
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Affiliation(s)
- Sarahani Harun
- Centre for Bioinformatics Research, Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Muhammad-Redha Abdullah-Zawawi
- Centre for Bioinformatics Research, Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Hoe-Han Goh
- Centre for Plant Biotechnology, Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Zeti-Azura Mohamed-Hussein
- Centre for Bioinformatics Research, Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
- Department of Applied Physics, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
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40
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Morikawa-Ichinose T, Miura D, Zhang L, Kim SJ, Maruyama-Nakashita A. Involvement of BGLU30 in Glucosinolate Catabolism in the Arabidopsis Leaf under Dark Conditions. PLANT & CELL PHYSIOLOGY 2020; 61:1095-1106. [PMID: 32255184 DOI: 10.1093/pcp/pcaa035] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2019] [Accepted: 02/14/2020] [Indexed: 06/11/2023]
Abstract
Glucosinolates (GSLs) are secondary metabolites that play important roles in plant defense and are suggested to act as storage compounds. Despite their important roles, metabolic dynamics of GSLs under various growth conditions remain poorly understood. To determine how light conditions influence the levels of different GSLs and their distribution in Arabidopsis leaves, we visualized the GSLs under different light conditions using matrix-assisted laser desorption/ionization mass spectrometry imaging. We observed the unique distribution patterns of each GSL in the inner regions of leaves and marked decreases under darkness, indicating light conditions influenced GSL metabolism. GSLs are hydrolyzed by a group of ß-glucosidase (BGLU) called myrosinase. Previous transcriptome data for GSL metabolism under light and dark conditions have revealed the highly induced expression of BGLU30, one of the putative myrosinases, which is also annotated as Dark INducible2, under darkness. Impairment of the darkness-induced GSL decrease in the disruption mutants of BGLU30, bglu30, indicated that BGLU30 mediated GSL hydrolysis under darkness. Based on the GSL profiles in the wild-type and bglu30 leaves under both conditions, short-chain GSLs were potentially preferable substrates for BGLU30. Our findings provide an effective way of visualizing GSL distribution in plants and highlighted the carbon storage GSL function.
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Affiliation(s)
- Tomomi Morikawa-Ichinose
- Department of Bioscience and Biotechnology Faculty of Agriculture, Kyushu University, 744, Motooka, Nishi-ku, Fukuoka 819-0395, Japan
- Innovation Center for Medical Redox Navigation, Kyushu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka 812-8582, Japan
| | - Daisuke Miura
- Innovation Center for Medical Redox Navigation, Kyushu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka 812-8582, Japan
- Biomedical Research Institute, National Institute of Advanced Industrial Science and Technology, Central 6, 1-1-1, Higashi, Tsukuba, Ibaraki 305-8566, Japan
| | - Liu Zhang
- Department of Bioscience and Biotechnology Faculty of Agriculture, Kyushu University, 744, Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Sun-Ju Kim
- Department of Bio-Environmental Chemistry College of Agriculture and Life Sciences, Chungnam National University, Daejeon 34134, Korea
| | - Akiko Maruyama-Nakashita
- Department of Bioscience and Biotechnology Faculty of Agriculture, Kyushu University, 744, Motooka, Nishi-ku, Fukuoka 819-0395, Japan
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Jasper J, Wagstaff C, Bell L. Growth temperature influences postharvest glucosinolate concentrations and hydrolysis product formation in first and second cuts of rocket salad. POSTHARVEST BIOLOGY AND TECHNOLOGY 2020; 163:111157. [PMID: 32362723 PMCID: PMC7104888 DOI: 10.1016/j.postharvbio.2020.111157] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/17/2019] [Revised: 02/12/2020] [Accepted: 02/14/2020] [Indexed: 06/11/2023]
Abstract
Rocket salad species (Diplotaxis tenuifolia and Eruca sativa; also known as E. vesicaria) are known for their high concentrations of health-related isothiocyanates, which are derived from secondary metabolites called glucosinolates. Increases in temperature due to climate change and extreme weather event frequencies over the coming decades are likely to influence not only the growth of leafy vegetables, but also their nutritional density. It is therefore essential to determine the impacts of these in order to mitigate crop losses and nutritional decline in future. Our data show there is a strong influence of pre-harvest growth temperatures on glucosinolate biosynthesis and formation of glucosinolate hydrolysis products postharvest, and that this is genotype dependent. High growth temperature (40 °C) severely retarded germination, growth, regrowth, and survival of rocket plants. Highest glucosinolate concentrations were observed in first and second cuts at 40 °C, but did not correspond to highest isothiocyanate concentrations (observed at 30 °C, second cut). Hydrolysis product formation is proportionately not as great as glucosinolate increases at 40 °C, possibly due to inhibition of enzyme function(s) at higher temperatures. These data indicate that high growth temperatures increase glucosinolate accumulation, but growth and productivity is significantly reduced. Much greater emphasis is needed for breeding cultivars tolerant to high growth temperatures in order to maximise nutritional benefits imparted by temperature stress.
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Affiliation(s)
- Jake Jasper
- School of Chemistry Food & Pharmacy, PO Box 226, University of Reading, Whiteknights, Reading, Berkshire, RG6 6AP, UK
| | - Carol Wagstaff
- School of Chemistry Food & Pharmacy, PO Box 226, University of Reading, Whiteknights, Reading, Berkshire, RG6 6AP, UK
| | - Luke Bell
- School of Agriculture, Policy & Development, PO Box 237, University of Reading, Whiteknights, Reading, Berkshire, RG6 6AR, UK
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Kozuka T, Sawada Y, Imai H, Kanai M, Hirai MY, Mano S, Uemura M, Nishimura M, Kusaba M, Nagatani A. Regulation of Sugar and Storage Oil Metabolism by Phytochrome during De-etiolation. PLANT PHYSIOLOGY 2020; 182:1114-1129. [PMID: 31748417 PMCID: PMC6997681 DOI: 10.1104/pp.19.00535] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2019] [Accepted: 11/02/2019] [Indexed: 05/02/2023]
Abstract
Exposure of dark-grown (etiolated) seedlings to light induces the heterotrophic-to-photoautotrophic transition (de-etiolation) processes, including the formation of photosynthetic machinery in the chloroplast and cotyledon expansion. Phytochrome is a red (R)/far-red (FR) light photoreceptor that is involved in the various aspects of de-etiolation. However, how phytochrome regulates metabolic dynamics in response to light stimulus has remained largely unknown. In this study, to elucidate the involvement of phytochrome in the metabolic response during de-etiolation, we performed widely targeted metabolomics in Arabidopsis (Arabidopsis thaliana) wild-type and phytochrome A and B double mutant seedlings de-etiolated under R or FR light. The results revealed that phytochrome had strong impacts on the primary and secondary metabolism during the first 24 h of de-etiolation. Among those metabolites, sugar levels decreased during de-etiolation in a phytochrome-dependent manner. At the same time, phytochrome upregulated processes requiring sugars. Triacylglycerols are stored in the oil bodies as a source of sugars in Arabidopsis seedlings. Sugars are provided from triacylglycerols through fatty acid β-oxidation and the glyoxylate cycle in glyoxysomes. We examined if and how phytochrome regulates sugar production from oil bodies. Irradiation of the etiolated seedlings with R and FR light dramatically accelerated oil body mobilization in a phytochrome-dependent manner. Glyoxylate cycle-deficient mutants not only failed to mobilize oil bodies but also failed to develop thylakoid membranes and expand cotyledon cells upon exposure to light. Hence, phytochrome plays a key role in the regulation of metabolism during de-etiolation.
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Affiliation(s)
- Toshiaki Kozuka
- Graduate School of Integrated Science for Life, Hiroshima University, Higashi-Hiroshima, Hiroshima 739-8526 Japan
| | - Yuji Sawada
- RIKEN Center for Sustainable Resource Science, RIKEN, Yokohama, Kanagawa 230-0045, Japan
| | - Hiroyuki Imai
- United Graduate School of Agricultural Science, Iwate University, Morioka, Iwate 020-8550, Japan
| | - Masatake Kanai
- Department of Cell Biology, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan
| | - Masami Yokota Hirai
- RIKEN Center for Sustainable Resource Science, RIKEN, Yokohama, Kanagawa 230-0045, Japan
| | - Shoji Mano
- Department of Cell Biology, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan
- Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi 444-8585, Japan
| | - Matsuo Uemura
- United Graduate School of Agricultural Science, Iwate University, Morioka, Iwate 020-8550, Japan
| | - Mikio Nishimura
- Department of Cell Biology, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan
| | - Makoto Kusaba
- Graduate School of Integrated Science for Life, Hiroshima University, Higashi-Hiroshima, Hiroshima 739-8526 Japan
| | - Akira Nagatani
- Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan
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Aghajanzadeh TA, Prajapati DH, Burow M. Differential partitioning of thiols and glucosinolates between shoot and root in Chinese cabbage upon excess zinc exposure. JOURNAL OF PLANT PHYSIOLOGY 2020; 244:153088. [PMID: 31812906 DOI: 10.1016/j.jplph.2019.153088] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2019] [Revised: 09/01/2019] [Accepted: 11/02/2019] [Indexed: 06/10/2023]
Abstract
Zinc (Zn) is one of the important elements of plant growth, however, at elevated level it is toxic. Exposure of Chinese cabbage to elevated Zn2+ concentrations (5 and 10 μM ZnCl2) resulted in enhancement of total sulfur and organic sulfur concentration. Transcript level of APS reductase (APR) as a key enzyme in biosynthesis of primary sulfur compounds (cysteine and thiols), was up-regulated in both shoot and root upon exposure to elevated Zn2+, which was accompanied by an increase in the concentration of cysteine in both tissues. In contrast, the concentration of thiols increased only in the root by 5.5 and 15-fold at 5 and 10 μM Zn2+, respectively, which was in accompanied by an upregulation of ATP sulfurylase, an enzyme responsible for activation of sulfate. An elevated content of glucosinolates, mostly indolic glucosinolates, only in the shoot of plants exposed to excess level of Zn2+ coincided with an increase in gene expression of key biosynthetic enzymes and regulators (CYP79B3, CYP83B1, MYB34). Thus distinct acuumulation patterns of sulfur containing compounds in root and shoot of Chinese cabbage may be a strategy for Chinese cabbage to combat with exposure to excess Zn.
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Affiliation(s)
- Tahereh A Aghajanzadeh
- Department of Biology, Faculty of Basic Science, University of Mazandaran, Babolsar, Iran.
| | - Dharmendra H Prajapati
- Laboratory of Plant Physiology, Groningen Institute for Evolutionary Life Sciences, University of Groningen, P.O. Box 11103, 9700 CC Groningen, the Netherlands
| | - Meike Burow
- DynaMo Center, Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark
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Chen J, Chen Z, Li Z, Zhao Y, Chen X, Wang-Pruski G, Guo R. Effect of Photoperiod on Chinese Kale ( Brassica alboglabra) Sprouts Under White or Combined Red and Blue Light. FRONTIERS IN PLANT SCIENCE 2020; 11:589746. [PMID: 33510744 PMCID: PMC7835638 DOI: 10.3389/fpls.2020.589746] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2020] [Accepted: 12/01/2020] [Indexed: 05/20/2023]
Abstract
To determine the response of Chinese kale (Brassica alboglabra) sprouts to photoperiods under different light sources, we used four photoperiods (0-h light/24-h dark, 8-h light/16-h dark, 12-h light/12-h dark, and 16-h light/8-h dark) to investigate their sprout growth and secondary metabolite glucosinolates (GSs) accumulation under white or combined red-and-blue (RB) light sources. We found that the 16-h light condition under RB light produced plants with the greatest dry matter. Sprouts grown under 16-h RB light condition achieved greater length than those under white light. To investigate the role of RB light in plant growth and GS accumulation, we applied RB light sources with different RB ratios (0:10, 2:8, 5:5, 8:2, and 10:0) to cultivate sprouts. The results showed that significant differential accumulation of GSs existed between sprouts grown under blue (RB, 0:10) and red (RB, 10:0) light; there was greater GS content under blue light. The underlying mechanism of differential GS content in sprouts under red or blue light condition was studied using RNA sequencing technique. Interestingly, abundant GS biosynthetic gene transcripts were observed in sprouts grown under red light compared with under blue light. The expression of β-glucosidase family homolog genes related to GS degradation differed under red and blue light conditions, among those TGG4 homolog was detected with higher expression under red light than with blue light. Taking into consideration, the lower GS accumulation in sprouts under red rather than blue light, we conclude that the degradation of GSs may play a key role in sprouts GS homeostasis.
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Affiliation(s)
- Jiaxuan Chen
- Joint FAFU-Dalhousie Lab, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Zeyuan Chen
- Joint FAFU-Dalhousie Lab, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
- Institute of Horticultural Biotechnology, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Zunwen Li
- Institute of Horticultural Biotechnology, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yijiao Zhao
- Institute of Horticultural Biotechnology, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Xiaodong Chen
- Institute of Horticultural Biotechnology, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Gefu Wang-Pruski
- Joint FAFU-Dalhousie Lab, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
- Department of Plant, Food, and Environmental Sciences, Faculty of Agriculture, Dalhousie University, Truro, NS, Canada
- Gefu Wang-Pruski,
| | - Rongfang Guo
- Joint FAFU-Dalhousie Lab, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
- Institute of Horticultural Biotechnology, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
- *Correspondence: Rongfang Guo,
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Yagishita Y, Fahey JW, Dinkova-Kostova AT, Kensler TW. Broccoli or Sulforaphane: Is It the Source or Dose That Matters? Molecules 2019; 24:E3593. [PMID: 31590459 PMCID: PMC6804255 DOI: 10.3390/molecules24193593] [Citation(s) in RCA: 162] [Impact Index Per Article: 32.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2019] [Accepted: 10/02/2019] [Indexed: 12/18/2022] Open
Abstract
There is robust epidemiological evidence for the beneficial effects of broccoli consumption on health, many of them clearly mediated by the isothiocyanate sulforaphane. Present in the plant as its precursor, glucoraphanin, sulforaphane is formed through the actions of myrosinase, a β-thioglucosidase present in either the plant tissue or the mammalian microbiome. Since first isolated from broccoli and demonstrated to have cancer chemoprotective properties in rats in the early 1990s, over 3000 publications have described its efficacy in rodent disease models, underlying mechanisms of action or, to date, over 50 clinical trials examining pharmacokinetics, pharmacodynamics and disease mitigation. This review evaluates the current state of knowledge regarding the relationships between formulation (e.g., plants, sprouts, beverages, supplements), bioavailability and efficacy, and the doses of glucoraphanin and/or sulforaphane that have been used in pre-clinical and clinical studies. We pay special attention to the challenges for better integration of animal model and clinical studies, particularly with regard to selection of dose and route of administration. More effort is required to elucidate underlying mechanisms of action and to develop and validate biomarkers of pharmacodynamic action in humans. A sobering lesson is that changes in approach will be required to implement a public health paradigm for dispensing benefit across all spectrums of the global population.
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Affiliation(s)
- Yoko Yagishita
- Translational Research Program, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
| | - Jed W Fahey
- Department of Medicine, Division of Clinical Pharmacology, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA.
- Department of Pharmacology and Molecular Sciences, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA.
- Cullman Chemoprotection Center, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA.
| | - Albena T Dinkova-Kostova
- Department of Pharmacology and Molecular Sciences, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA.
- Cullman Chemoprotection Center, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA.
- Jacqui Wood Cancer Centre, Division of Cellular Medicine, Ninewells Hospital and Medical School, University of Dundee, Dundee DD1 9SY, Scotland DD1 9SY, UK.
| | - Thomas W Kensler
- Translational Research Program, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
- Cullman Chemoprotection Center, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA.
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Telman W, Dietz KJ. Thiol redox-regulation for efficient adjustment of sulfur metabolism in acclimation to abiotic stress. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4223-4236. [PMID: 30868161 DOI: 10.1093/jxb/erz118] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2018] [Accepted: 03/07/2019] [Indexed: 06/09/2023]
Abstract
Sulfur assimilation and sulfur metabolism are tightly controlled at the transcriptional, post-transcriptional, and post-translational levels in order to meet the demand for reduced sulfur in growth and metabolism. These regulatory mechanisms coordinate the cellular sulfhydryl supply with carbon and nitrogen assimilation in particular. Redox homeostasis is an important cellular parameter intimately connected to sulfur by means of multiple thiol modifications. Post-translational thiol modifications such as disulfide formation, sulfenylation, S-nitrosylation, persulfidation, and S-glutathionylation allow for versatile switching and adjustment of protein functions. This review focuses on redox-regulation of enzymes involved in the sulfur assimilation pathway, namely adenosine 5´-phosphosulfate reductase (APR), adenosine 5´-phosphosulfate kinase (APSK), and γ-glutamylcysteine ligase (GCL). The activity of these enzymes is adjusted at the transcriptional and post-translational level depending on physiological requirements and the state of the redox and reactive oxygen species network, which are tightly linked to abiotic stress conditions. Hormone-dependent fine-tuning contributes to regulation of sulfur assimilation. Thus, the link between oxylipin signalling and sulfur assimilation has been substantiated by identification of the so-called COPS module in the chloroplast with its components cyclophilin 20-3, O-acetylserine thiol lyase, 2-cysteine peroxiredoxin, and serine acetyl transferase. We now have a detailed understanding of how regulation enables the fine-tuning of sulfur assimilation under both normal and abiotic stress conditions.
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Affiliation(s)
- Wilena Telman
- Department of Biochemistry and Physiology of Plants, Faculty of Biology, Bielefeld University, Universitätsstr. 25, Bielefeld, Germany
| | - Karl-Josef Dietz
- Department of Biochemistry and Physiology of Plants, Faculty of Biology, Bielefeld University, Universitätsstr. 25, Bielefeld, Germany
- Center for Biotechnology-CeBiTec, Bielefeld University, Universitätsstr. 27, Bielefeld, Germany
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Alrifai O, Hao X, Marcone MF, Tsao R. Current Review of the Modulatory Effects of LED Lights on Photosynthesis of Secondary Metabolites and Future Perspectives of Microgreen Vegetables. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2019; 67:6075-6090. [PMID: 31021630 DOI: 10.1021/acs.jafc.9b00819] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Light-emitting diode (LED) lights have recently been applied in controlled environment agriculture toward growing vegetables of various assortments, including microgreens. Spectral qualities of LED light on photosynthesis in microgreens are currently being studied for their ease of spectral optimization and high photosynthetic efficiency. This review aims to summarize the most recent discoveries and advances in specific phytochemical biosyntheses modulated by LED and other conventional lighting, to identify research gaps, and to provide future perspectives in this emerging multidisciplinary field of research and development. Specific emphasis was made on the effect of light spectral qualities on the biosynthesis of phenolics, carotenoids, and glucosinolates, as these phytochemicals are known for their antioxidant, anti-inflammatory effects, and many health benefits. Future perspectives on enhancing biosynthesis of these bioactives using the rapidly progressing LED light technology are further discussed.
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Affiliation(s)
- Oday Alrifai
- Guelph Research & Development Center , Agriculture and Agri-Food Canada , 93 Stone Road West , Guelph , Ontario N1G 5C9 , Canada
- Department of Food Science, Ontario Agricultural College , University of Guelph , Guelph , Ontario N1G 2W1 , Canada
| | - Xiuming Hao
- Harrow Research & Development Center , Agriculture and Agri-Food Canada , 2585 County Road 20 , Harrow , Ontario N0R 1G0 , Canada
| | - Massimo F Marcone
- Department of Food Science, Ontario Agricultural College , University of Guelph , Guelph , Ontario N1G 2W1 , Canada
| | - Rong Tsao
- Guelph Research & Development Center , Agriculture and Agri-Food Canada , 93 Stone Road West , Guelph , Ontario N1G 5C9 , Canada
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Anoman AD, Flores-Tornero M, Benstein RM, Blau S, Rosa-Téllez S, Bräutigam A, Fernie AR, Muñoz-Bertomeu J, Schilasky S, Meyer AJ, Kopriva S, Segura J, Krueger S, Ros R. Deficiency in the Phosphorylated Pathway of Serine Biosynthesis Perturbs Sulfur Assimilation. PLANT PHYSIOLOGY 2019; 180:153-170. [PMID: 30787133 PMCID: PMC6501105 DOI: 10.1104/pp.18.01549] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2018] [Accepted: 02/05/2019] [Indexed: 05/19/2023]
Abstract
Although the plant Phosphorylated Pathway of l-Ser Biosynthesis (PPSB) is essential for embryo and pollen development, and for root growth, its metabolic implications have not been fully investigated. A transcriptomics analysis of Arabidopsis (Arabidopsis thaliana) PPSB-deficient mutants at night, when PPSB activity is thought to be more important, suggested interaction with the sulfate assimilation process. Because sulfate assimilation occurs mainly in the light, we also investigated it in PPSB-deficient lines in the day. Key genes in the sulfate starvation response, such as the adenosine 5'phosphosulfate reductase genes, along with sulfate transporters, especially those involved in sulfate translocation in the plant, were induced in the PPSB-deficient lines. However, sulfate content was not reduced in these lines as compared with wild-type plants; besides the glutathione (GSH) steady-state levels in roots of PPSB-deficient lines were even higher than in wild type. This suggested that PPSB deficiency perturbs the sulfate assimilation process between tissues/organs. Alteration of thiol distribution in leaves from different developmental stages, and between aerial parts and roots in plants with reduced PPSB activity, provided evidence supporting this idea. Diminished PPSB activity caused an enhanced flux of 35S into thiol biosynthesis, especially in roots. GSH turnover also accelerated in the PPSB-deficient lines, supporting the notion that not only biosynthesis, but also transport and allocation, of thiols were perturbed in the PPSB mutants. Our results suggest that PPSB is required for sulfide assimilation in specific heterotrophic tissues and that a lack of PPSB activity perturbs sulfur homeostasis between photosynthetic and nonphotosynthetic tissues.
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Affiliation(s)
- Armand D Anoman
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
| | - María Flores-Tornero
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
| | - Ruben M Benstein
- Biocenter - Botanical Institute II, University of Cologne, 50674 Cologne, Germany
- Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umeå, Sweden
| | - Samira Blau
- Biocenter - Botanical Institute II, University of Cologne, 50674 Cologne, Germany
| | - Sara Rosa-Téllez
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
| | - Andrea Bräutigam
- Fakultät für Biologie Gebäude G (CebiTec), Bielefeld University, 33615 Bielefeld, Germany
| | - Alisdair R Fernie
- Max Planck Institut für Molekulare Pflanzenphysiologie, 14476 Potsdam-Golm, Germany
| | - Jesús Muñoz-Bertomeu
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
| | - Sören Schilasky
- INRES-Chemical Signalling, University Bonn, 53113 Bonn, Germany
| | - Andreas J Meyer
- INRES-Chemical Signalling, University Bonn, 53113 Bonn, Germany
| | - Stanislav Kopriva
- Biocenter - Botanical Institute II, University of Cologne, 50674 Cologne, Germany
- Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, 50674 Cologne, Germany
| | - Juan Segura
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
| | - Stephan Krueger
- Biocenter - Botanical Institute II, University of Cologne, 50674 Cologne, Germany
| | - Roc Ros
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
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49
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Höll J, Lindner S, Walter H, Joshi D, Poschet G, Pfleger S, Ziegler T, Hell R, Bogs J, Rausch T. Impact of pulsed UV-B stress exposure on plant performance: How recovery periods stimulate secondary metabolism while reducing adaptive growth attenuation. PLANT, CELL & ENVIRONMENT 2019; 42:801-814. [PMID: 30049021 DOI: 10.1111/pce.13409] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Revised: 07/13/2018] [Accepted: 07/15/2018] [Indexed: 05/20/2023]
Abstract
Upon continuous stress exposure, plants display attenuated metabolic stress responses due to regulatory feedback loops. Here, we have tested the hypothesis that pulsed stress exposure with intervening recovery periods should affect these feedback loops, thereby causing increased accumulation of stress-induced metabolites. The response of Arabidopsis plantlets to continuous UV-B exposure (Cuv ) was compared with that of pulsed UV-B exposure (Puv ). The differential responses to Puv versus Cuv were monitored at the level of gene expression and metabolite accumulation, using wild type (WT) and different mutant lines. In comparison with Cuv , Puv increased sinapyl and flavonol (S + F) content, whereas adaptive growth attenuation was reduced. Furthermore, in a myb4 mutant (AtMYB4, repressor-type R2R3-MYB transcription factor), the S + F content was increased only for Cuv , but not beyond the level for Puv observed in WT. These observations and the ability of AtMYB4 to repress AtMYB12/AtMYB111-mediated activation of target gene promoters (pCHS and pFLS) indicate that the increase of S + F content after Puv observed in WT plants results from reduced feedback inhibition by AtMYB4. The results support the notion that stress-induced metabolic changes not necessarily cause a growth penalty. Furthermore, the observed Puv -induced increase in flavonol accumulation may stimulate reevaluation of commercial plant production practices.
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Affiliation(s)
- Janine Höll
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Sonja Lindner
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Hannah Walter
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Drishti Joshi
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Gernot Poschet
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
- Metabolomics Core Technology Platform, Heidelberg University, Heidelberg, Germany
| | - Sina Pfleger
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Tobias Ziegler
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Rüdiger Hell
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
- Metabolomics Core Technology Platform, Heidelberg University, Heidelberg, Germany
| | - Jochen Bogs
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
- Dienstleistungszentrum Ländlicher Raum Rheinpfalz, Viticulture and Enology Group, Neustadt, Germany
- Fachhochschule Bingen, Bingen am Rhein, Germany
| | - Thomas Rausch
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
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50
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Transcriptome Analysis of Diurnal Gene Expression in Chinese Cabbage. Genes (Basel) 2019; 10:genes10020130. [PMID: 30754711 PMCID: PMC6409912 DOI: 10.3390/genes10020130] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2018] [Revised: 01/31/2019] [Accepted: 02/04/2019] [Indexed: 12/17/2022] Open
Abstract
Plants have developed timing mechanisms that enable them to maintain synchrony with daily environmental events. These timing mechanisms, i.e., circadian clocks, include transcriptional/translational feedback loops that drive 24 h transcriptional rhythms, which underlie oscillations in protein abundance, thus mediating circadian rhythms of behavior, physiology, and metabolism. Circadian clock genes have been investigated in the diploid model plant Arabidopsis thaliana. Crop plants with polyploid genomes—such as Brassica species—have multiple copies of some clock-related genes. Over the last decade, numerous studies have been aimed at identifying and understanding the function of paralogous genes with conserved sequences, or those that diverged during evolution. Brassica rapa’s triplicate genomes retain sequence-level collinearity with Arabidopsis. In this study, we used RNA sequencing (RNAseq) to profile the diurnal transcriptome of Brassica rapa seedlings. We identified candidate paralogs of circadian clock-related genes and assessed their expression levels. These genes and their related traits that modulate the diurnal rhythm of gene expression contribute to the adaptation of crop cultivars. Our findings will contribute to the mechanistic study of circadian clock regulation inherent in polyploidy genome crops, which differ from those of model plants, and thus will be useful for future breeding studies using clock genes.
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