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Kolackova M, Janova A, Dobesova M, Zvalova M, Chaloupsky P, Krystofova O, Adam V, Huska D. Role of secondary metabolites in distressed microalgae. ENVIRONMENTAL RESEARCH 2023; 224:115392. [PMID: 36746204 DOI: 10.1016/j.envres.2023.115392] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Revised: 01/09/2023] [Accepted: 01/28/2023] [Indexed: 06/18/2023]
Abstract
Proficient photosynthetic microalgae/cyanobacteria produce a remarkable amount of various biomolecules. Secondary metabolites (SM) represent high value products for global biotrend application. Production improvement can be achieved by nutritional, environmental, and physiological stress as a first line tools for their stimulation. In recent decade, an increasing interest in algal stress biology and omics techniques have deepened knowledge in this area. However, deep understanding and connection of specific stress elucidator are missing. Hence, the present review summarizes recent evidence with an emphasis on the carotenoids, phenolic, and less-discussed compounds (glycerol, proline, mycosporins-like amino acids). Even when they are synthesized at very low concentrations, it highlights the need to expand knowledge in this area using genome-editing tools and omics approaches.
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Affiliation(s)
- Martina Kolackova
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, 613 00, Brno, Czech Republic
| | - Anna Janova
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, 613 00, Brno, Czech Republic
| | - Marketa Dobesova
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, 613 00, Brno, Czech Republic
| | - Monika Zvalova
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, 613 00, Brno, Czech Republic
| | - Pavel Chaloupsky
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, 613 00, Brno, Czech Republic
| | - Olga Krystofova
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, 613 00, Brno, Czech Republic
| | - Vojtech Adam
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, 613 00, Brno, Czech Republic
| | - Dalibor Huska
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, 613 00, Brno, Czech Republic.
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Liu C, Zhao Z, Xu Q, Zhang H, Liu X, Yin C, Yan H, Liu Y. Comparative Genomic Analysis of Sphingomonas morindae sp. NBD5 and Sphingopyxis sp. USTB-05 for Producing Macular Pigment. Microorganisms 2023; 11:microorganisms11020266. [PMID: 36838230 PMCID: PMC9967899 DOI: 10.3390/microorganisms11020266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2022] [Revised: 01/01/2023] [Accepted: 01/04/2023] [Indexed: 01/22/2023] Open
Abstract
Sphingomonas morindae sp. NBD5, which we previously identified and tested, is a new bacterial strain for producing lutein. Here, based on the next-generation sequencing technology, we analyzed high throughput genomic sequences and compared related functional genes of Sphingomonas morindae sp. NBD5 and Sphingopyxis sp. USTB-05. The genome of Sphingomonas morindae sp. NBD5 has two sets of chromosomes, which is 4,239,716 bp and harbors 3882 protein coding genes. There are 59 protein-coding genes related to the macular pigment (MP) biosynthesis, of which four genes (ackA, pgm, gpmI and pckA) are unique. These genes, pckG, porB, meh, and fldA, are unique in Sphingopyxis sp. USTB-05. The analysis of Sphingomonas morindae sp. NBD5 and Sphingopyxis sp. USTB-05 genomes gives an insight into the new pathway for MP production. These genes for the transformation of glucose to MP were also found in Sphingomonas morindae sp. NBD5 and Sphingopyxis sp. USTB-05. This study expands the understanding of the pathway for complete biosynthesis of MP by Sphingomonas morindae sp. NBD5 and Sphingopyxis sp. USTB-05.
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Affiliation(s)
| | | | | | | | | | | | - Hai Yan
- Correspondence: (H.Y.); (Y.L.)
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3
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Zhao Z, Chen J, Ci F, Pang H, Cheng N, Xing A. α-Carotene: a valuable carotenoid in biological and medical research. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2022; 102:5606-5617. [PMID: 35478460 DOI: 10.1002/jsfa.11966] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Revised: 04/24/2022] [Accepted: 04/27/2022] [Indexed: 06/14/2023]
Abstract
α-Carotene, one of the C40 carotenes, is a natural lipid-soluble terpene. The chemical structure of α-carotene is based on the unsaturated polyene chain skeleton, with an ε-ring and a β-ring on each side of the skeleton. α-Carotene is widely found in dietary fruits and vegetables, and the concentration depends on the plant species. In addition, processing methods and storage conditions used in the food and medical industries can alter the concentration of α-carotene in raw materials. This review of α-carotene summarizes the major studies on chemical structure, source, extraction, detection, biosynthesis, processing effect, bioactivity, medicine, and biotechnology. Whether α-carotene supplementation or a diet rich in fruits and vegetables has a positive effect on the prevention of cancer, cardiovascular disease, and other diseases is the focus of this study. © 2022 Society of Chemical Industry.
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Affiliation(s)
- Zilong Zhao
- Department of Environmental and Food Engineering, Liuzhou Vocational and Technical College, Liuzhou, China
| | - Jing Chen
- Department of Environmental and Food Engineering, Liuzhou Vocational and Technical College, Liuzhou, China
| | - FangFang Ci
- Weihai Institute for Food and Drug Control, Weihai, China
| | - He Pang
- Ningbo Innolux Optoelectronics Ltd, Innolux Display Group, Innolux Corporation, Ningbo, China
| | - Ning Cheng
- Department of Environmental and Food Engineering, Liuzhou Vocational and Technical College, Liuzhou, China
| | - Aijia Xing
- Department of Food Engineering, Harbin University of Science and Technology (Rongcheng Campus), Weihai, China
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Maltsev Y, Maltseva K, Kulikovskiy M, Maltseva S. Influence of Light Conditions on Microalgae Growth and Content of Lipids, Carotenoids, and Fatty Acid Composition. BIOLOGY 2021; 10:1060. [PMID: 34681157 PMCID: PMC8533579 DOI: 10.3390/biology10101060] [Citation(s) in RCA: 57] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 10/13/2021] [Accepted: 10/14/2021] [Indexed: 02/06/2023]
Abstract
Microalgae are a valuable natural resource for a variety of value-added products. The growth of microalgae is determined by the impact of many factors, but, from the point of view of the implementation of autotrophic growth, light is of primary importance. This work presents an overview of the influence of light conditions on the growth of microalgae, the content of lipids, carotenoids, and the composition of fatty acids in their biomass, taking into account parameters such as the intensity, duration of lighting, and use of rays of different spectral composition. The optimal light intensity for the growth of microalgae lies in the following range: 26-400 µmol photons m-2 s-1. An increase in light intensity leads to an activation of lipid synthesis. For maximum lipid productivity, various microalgae species and strains need lighting of different intensities: from 60 to 700 µmol photons m-2 s-1. Strong light preferentially increases the triacylglyceride content. The intensity of lighting has a regulating effect on the synthesis of fatty acids, carotenoids, including β-carotene, lutein and astaxanthin. In intense lighting conditions, saturated fatty acids usually accumulate, as well as monounsaturated ones, and the number of polyunsaturated fatty acids decreases. Red as well as blue LED lighting improves the biomass productivity of microalgae of various taxonomic groups. Changing the duration of the photoperiod, the use of pulsed light can stimulate microalgae growth, the production of lipids, and carotenoids. The simultaneous use of light and other stresses contributes to a stronger effect on the productivity of algae.
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Affiliation(s)
- Yevhen Maltsev
- Laboratory of Molecular Systematics of Aquatic Plants, K.A. Timiryazev Institute of Plant Physiology RAS, IPP RAS, 127276 Moscow, Russia; (M.K.); (S.M.)
| | - Kateryna Maltseva
- Faculty of Chemistry and Biology, Bogdan Khmelnitsky Melitopol State Pedagogical University, 72312 Melitopol, Ukraine;
| | - Maxim Kulikovskiy
- Laboratory of Molecular Systematics of Aquatic Plants, K.A. Timiryazev Institute of Plant Physiology RAS, IPP RAS, 127276 Moscow, Russia; (M.K.); (S.M.)
| | - Svetlana Maltseva
- Laboratory of Molecular Systematics of Aquatic Plants, K.A. Timiryazev Institute of Plant Physiology RAS, IPP RAS, 127276 Moscow, Russia; (M.K.); (S.M.)
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Lehmann M, Vamvaka E, Torrado A, Jahns P, Dann M, Rosenhammer L, Aziba A, Leister D, Rühle T. Introduction of the Carotenoid Biosynthesis α-Branch Into Synechocystis sp. PCC 6803 for Lutein Production. FRONTIERS IN PLANT SCIENCE 2021; 12:699424. [PMID: 34295345 PMCID: PMC8291087 DOI: 10.3389/fpls.2021.699424] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Accepted: 06/09/2021] [Indexed: 06/13/2023]
Abstract
Lutein, made by the α-branch of the methyl-erythritol phosphate (MEP) pathway, is one of the most abundant xanthophylls in plants. It is involved in the structural stabilization of light-harvesting complexes, transfer of excitation energy to chlorophylls and photoprotection. In contrast, lutein and the α-branch of the MEP pathway are not present in cyanobacteria. In this study, we genetically engineered the cyanobacterium Synechocystis for the missing MEP α-branch resulting in lutein accumulation. A cassette comprising four Arabidopsis thaliana genes coding for two lycopene cyclases (AtLCYe and AtLCYb) and two hydroxylases (AtCYP97A and AtCYP97C) was introduced into a Synechocystis strain that lacks the endogenous, cyanobacterial lycopene cyclase cruA. The resulting synlut strain showed wild-type growth and only moderate changes in total pigment composition under mixotrophic conditions, indicating that the cruA deficiency can be complemented by Arabidopsis lycopene cyclases leaving the endogenous β-branch intact. A combination of liquid chromatography, UV-Vis detection and mass spectrometry confirmed a low but distinct synthesis of lutein at rates of 4.8 ± 1.5 nmol per liter culture at OD730 (1.03 ± 0.47 mmol mol-1 chlorophyll). In conclusion, synlut provides a suitable platform to study the α-branch of the plastidic MEP pathway and other functions related to lutein in a cyanobacterial host system.
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Affiliation(s)
- Martin Lehmann
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-University Munich, Munich, Germany
| | - Evgenia Vamvaka
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-University Munich, Munich, Germany
| | - Alejandro Torrado
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-University Munich, Munich, Germany
| | - Peter Jahns
- Plant Biochemistry, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany
| | - Marcel Dann
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-University Munich, Munich, Germany
| | - Lea Rosenhammer
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-University Munich, Munich, Germany
| | - Amel Aziba
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-University Munich, Munich, Germany
| | - Dario Leister
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-University Munich, Munich, Germany
| | - Thilo Rühle
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-University Munich, Munich, Germany
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Maroneze MM, Caballero-Guerrero B, Zepka LQ, Jacob-Lopes E, Pérez-Gálvez A, Roca M. Accomplished High-Resolution Metabolomic and Molecular Studies Identify New Carotenoid Biosynthetic Reactions in Cyanobacteria. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:6212-6220. [PMID: 32400160 DOI: 10.1021/acs.jafc.0c01306] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Cyanobacteria and microalgae are characterized by a rich and varied profile of chlorophyll (8-20 mg/g) and carotenoid (>2.2 mg/g) pigments, being noteworthy material for natural pigment production in the food industry. We propose a systematic workflow that uses high-performance liquid chromatography (HPLC) coupled with high-resolution tandem mass spectrometry in a broadband collision-induced dissociation mode (bbCID) acquisition mode to simultaneously obtain MS and MSn spectra. Metabolomic studies showed for the first time the presence of carotenoids with 5,6-epoxy-groups (5,6-epoxy- and 5,8-furanoid β-cryptoxanthin), carotenoids from the α-branch (5,8-furanoid-2'-3'-didehydro α-cryptoxanthin), and 2'-dehydrodeoxomyxol in cyanobacteria. To support the new findings, an in silico search retrieved the putative sequences of carotenogenic enzymes involved in the corresponding biosynthetic pathways (ZEP, NSY, CrtL-b and CrtR) in the analyzed cyanobacteria species. Consequently, high-throughput metabolomics studies assisted by molecular analysis offer a powerful tool for providing insights into the characterization of bioactive compounds and their metabolism in cyanobacteria and microalgae.
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Affiliation(s)
- Mariana Manzoni Maroneze
- Department of Food Science and Technology, Federal University of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Belén Caballero-Guerrero
- Microbiology Service, Instituto de la Grasa (CSIC), University Campus, Building 46, 41013 Sevilla, Spain
| | - Leila Queiroz Zepka
- Department of Food Science and Technology, Federal University of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Eduardo Jacob-Lopes
- Department of Food Science and Technology, Federal University of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Antonio Pérez-Gálvez
- Food Phytochemistry Department, Instituto de la Grasa (CSIC), University Campus, Building 46, 41013 Sevilla, Spain
| | - María Roca
- Food Phytochemistry Department, Instituto de la Grasa (CSIC), University Campus, Building 46, 41013 Sevilla, Spain
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7
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Resilience and self-regulation processes of microalgae under UV radiation stress. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C: PHOTOCHEMISTRY REVIEWS 2020. [DOI: 10.1016/j.jphotochemrev.2019.100322] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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8
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Sugiyama K, Takaichi S. Carotenogenesis in cyanobacteria: CruA/CruP-type and CrtL-type lycopene cyclases. J GEN APPL MICROBIOL 2020; 66:53-58. [PMID: 32224594 DOI: 10.2323/jgam.2020.01.005] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
Cyanobacteria are oxygenic photoautotrophic prokaryotes containing chlorophylls and carotenoids, and the latter play important roles in light-harvesting, protection of excess light, assembly of pigment-protein complexes, and stabilization of lipid membranes. Cyanobacteria produce many kinds of carotenoids, such as β-carotene, zeaxanthin, echinenone, and myxol glycosides, which have a cyclic structure at one or both end(s). Cyclization of lycopene is a branch point in carotenoid biosynthesis to β-carotene and γ-carotene. Two types of lycopene cyclases, CruA/CruP-type and CrtL-type, are functionally confirmed in only five species, while homologous genes are found in the genomes of most cyanobacteria. This review summarizes the carotenogenesis pathways and the functional enzymes along with genes, focusing particularly on the cyclization of lycopene by distinct types of lycopene cyclases in cyanobacteria.
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Affiliation(s)
- Kenjiro Sugiyama
- Department of Applied Chemistry, School of Advanced Engineering, Kogakuin University
| | - Shinichi Takaichi
- Department of Molecular Microbiology, Faculty of Life Science, Tokyo University of Agriculture
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9
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Lim H, Tanaka A, Tanaka R, Ito H. In Vitro Enzymatic Activity Assays Implicate the Existence of the Chlorophyll Cycle in Chlorophyll b-Containing Cyanobacteria. PLANT & CELL PHYSIOLOGY 2019; 60:2672-2683. [PMID: 31392311 DOI: 10.1093/pcp/pcz157] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Accepted: 08/02/2019] [Indexed: 06/10/2023]
Abstract
In plants, chlorophyll (Chl) a and b are interconvertible by the action of three enzymes-chlorophyllide a oxygenase, Chl b reductase (CBR) and 7-hydroxymethyl chlorophyll a reductase (HCAR). These reactions are collectively referred to as the Chl cycle. In plants, this cyclic pathway ubiquitously exists and plays essential roles in acclimation to different light conditions at various developmental stages. By contrast, only a limited number of cyanobacteria species produce Chl b, and these include Prochlorococcus, Prochloron, Prochlorothrix and Acaryochloris. In this study, we investigated a possible existence of the Chl cycle in Chl b synthesizing cyanobacteria by testing in vitro enzymatic activities of CBR and HCAR homologs from Prochlorothrix hollandica and Acaryochloris RCC1774. All of these proteins show respective CBR and HCAR activity in vitro, indicating that both cyanobacteria possess the potential to complete the Chl cycle. It is also found that CBR and HCAR orthologs are distributed only in the Chl b-containing cyanobacteria that habitat shallow seas or freshwater, where light conditions change dynamically, whereas they are not found in Prochlorococcus species that usually habitat environments with fixed lighting. Taken together, our results implicate a possibility that the Chl cycle functions for light acclimation in Chl b-containing cyanobacteria.
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Affiliation(s)
- HyunSeok Lim
- Institute of Low Temperature Science, Hokkaido University, N19 W8, Sapporo, 060-0819 Japan
| | - Ayumi Tanaka
- Institute of Low Temperature Science, Hokkaido University, N19 W8, Sapporo, 060-0819 Japan
| | - Ryouichi Tanaka
- Institute of Low Temperature Science, Hokkaido University, N19 W8, Sapporo, 060-0819 Japan
| | - Hisashi Ito
- Institute of Low Temperature Science, Hokkaido University, N19 W8, Sapporo, 060-0819 Japan
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Bogacz-Radomska L, Harasym J. β-Carotene—properties and production methods. FOOD QUALITY AND SAFETY 2018. [DOI: 10.1093/fqsafe/fyy004] [Citation(s) in RCA: 78] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Ludmila Bogacz-Radomska
- Department of Biotechnology and Food Analysis, Faculty of Engineering and Economics, Wroclaw University of Economics, Wroclaw, Poland
| | - Joanna Harasym
- Department of Biotechnology and Food Analysis, Faculty of Engineering and Economics, Wroclaw University of Economics, Wroclaw, Poland
- Department of Agriculture and Forestry Engineering, College of Agricultural and Forestry Engineering, University of Valladolid, Valladolid, Spain
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12
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Yabuzaki J. Carotenoids Database: structures, chemical fingerprints and distribution among organisms. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 2017; 2017:3053444. [PMID: 28365725 PMCID: PMC5574413 DOI: 10.1093/database/bax004] [Citation(s) in RCA: 153] [Impact Index Per Article: 21.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/13/2016] [Accepted: 01/16/2017] [Indexed: 01/24/2023]
Abstract
To promote understanding of how organisms are related via carotenoids, either evolutionarily or symbiotically, or in food chains through natural histories, we built the Carotenoids Database. This provides chemical information on 1117 natural carotenoids with 683 source organisms. For extracting organisms closely related through the biosynthesis of carotenoids, we offer a new similarity search system 'Search similar carotenoids' using our original chemical fingerprint 'Carotenoid DB Chemical Fingerprints'. These Carotenoid DB Chemical Fingerprints describe the chemical substructure and the modification details based upon International Union of Pure and Applied Chemistry (IUPAC) semi-systematic names of the carotenoids. The fingerprints also allow (i) easier prediction of six biological functions of carotenoids: provitamin A, membrane stabilizers, odorous substances, allelochemicals, antiproliferative activity and reverse MDR activity against cancer cells, (ii) easier classification of carotenoid structures, (iii) partial and exact structure searching and (iv) easier extraction of structural isomers and stereoisomers. We believe this to be the first attempt to establish fingerprints using the IUPAC semi-systematic names. For extracting close profiled organisms, we provide a new tool 'Search similar profiled organisms'. Our current statistics show some insights into natural history: carotenoids seem to have been spread largely by bacteria, as they produce C30, C40, C45 and C50 carotenoids, with the widest range of end groups, and they share a small portion of C40 carotenoids with eukaryotes. Archaea share an even smaller portion with eukaryotes. Eukaryotes then have evolved a considerable variety of C40 carotenoids. Considering carotenoids, eukaryotes seem more closely related to bacteria than to archaea aside from 16S rRNA lineage analysis. Database URL : http://carotenoiddb.jp.
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Affiliation(s)
- Junko Yabuzaki
- Center for Information Biology, National Institute of Genetics, Yata 1111, Mishima, Shizuoka 411-8540, Japan
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Hamada F, Murakami A, Akimoto S. Adaptation of Divinyl Chlorophyll a/b-Containing Cyanobacterium to Different Light Conditions: Three Strains of Prochlorococcus marinus. J Phys Chem B 2017; 121:9081-9090. [DOI: 10.1021/acs.jpcb.7b04835] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Fumiya Hamada
- Graduate
School of Science, Kobe University, Kobe 657-8501, Japan
| | - Akio Murakami
- Graduate
School of Science, Kobe University, Kobe 657-8501, Japan
- Kobe University Research Center for Inland Seas, Awaji 656-2401, Japan
| | - Seiji Akimoto
- Graduate
School of Science, Kobe University, Kobe 657-8501, Japan
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Xiong W, Shen G, Bryant DA. Synechocystis sp. PCC 6803 CruA (sll0147) encodes lycopene cyclase and requires bound chlorophyll a for activity. PHOTOSYNTHESIS RESEARCH 2017; 131:267-280. [PMID: 27743323 DOI: 10.1007/s11120-016-0316-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2016] [Accepted: 10/06/2016] [Indexed: 05/15/2023]
Abstract
The genome of the model cyanobacterium, Synechococcus sp. PCC 7002, encodes two paralogs of CruA-type lycopene cyclases, SynPCC7002_A2153 and SynPCC7002_A0043, which are denoted cruA and cruP, respectively. Unlike the wild-type strain, a cruA deletion mutant is light-sensitive, grows slowly, and accumulates lycopene, γ-carotene, and 1-OH-lycopene; however, this strain still produces β-carotene and other carotenoids derived from it. Expression of cruA from Synechocystis sp. PCC 6803 (cruA 6803) in Escherichia coli strains that synthesize either lycopene or γ-carotene did not lead to the synthesis of either γ-carotene or β-carotene, respectively. However, expression of this orthologous cruA 6803 gene (sll0147) in the Synechococcus sp. PCC 7002 cruA deletion mutant produced strains with phenotypic properties identical to the wild type. CruA6803 was purified from Synechococcus sp. PCC 7002 by affinity chromatography, and the purified protein was pale yellow-green due to the presence of bound chlorophyll (Chl) a and β-carotene. Native polyacrylamide gel electrophoresis of the partly purified protein in the presence of lithium dodecylsulfate at 4 °C confirmed that the protein was yellow-green in color. When purified CruA6803 was assayed in vitro with either lycopene or γ-carotene as substrate, β-carotene was synthesized. These data establish that CruA6803 is a lycopene cyclase and that it requires a bound Chl a molecule for activity. Possible binding sites for Chl a and the potential regulatory role of the Chl a in coordination of Chl and carotenoid biosynthesis are discussed.
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Affiliation(s)
- Wei Xiong
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, 16802, USA
| | - Gaozhong Shen
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, 16802, USA
| | - Donald A Bryant
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, 16802, USA.
- Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT, 59717, USA.
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15
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Takaichi S, Yokoyama A, Mochimaru M, Uchida H, Murakami A. Carotenogenesis diversification in phylogenetic lineages of Rhodophyta. JOURNAL OF PHYCOLOGY 2016; 52:329-338. [PMID: 27273528 DOI: 10.1111/jpy.12411] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2015] [Accepted: 03/07/2016] [Indexed: 06/06/2023]
Abstract
Carotenoid composition is very diverse in Rhodophyta. In this study, we investigated whether this variation is related to the phylogeny of this group. Rhodophyta consists of seven classes, and they can be divided into two groups on the basis of their morphology. The unicellular group (Cyanidiophyceae, Porphyridiophyceae, Rhodellophyceae, and Stylonematophyceae) contained only β-carotene and zeaxanthin, "ZEA-type carotenoids." In contrast, within the macrophytic group (Bangiophyceae, Compsopogonophyceae, and Florideophyceae), Compsopogonophyceae contained antheraxanthin in addition to ZEA-type carotenoids, "ANT-type carotenoids," whereas Bangiophyceae contained α-carotene and lutein along with ZEA-type carotenoids, "LUT-type carotenoids." Florideophyceae is divided into five subclasses. Ahnfeltiophycidae, Hildenbrandiophycidae, and Nemaliophycidae contained LUT-type carotenoids. In Corallinophycidae, Hapalidiales and Lithophylloideae in Corallinales contained LUT-type carotenoids, whereas Corallinoideae in Corallinales contained ANT-type carotenoids. In Rhodymeniophycidae, most orders contained LUT-type carotenoids; however, only Gracilariales contained ANT-type carotenoids. There is a clear relationship between carotenoid composition and phylogenetics in Rhodophyta. Furthermore, we searched open genome databases of several red algae for references to the synthetic enzymes of the carotenoid types detected in this study. β-Carotene and zeaxanthin might be synthesized from lycopene, as in land plants. Antheraxanthin might require zeaxanthin epoxydase, whereas α-carotene and lutein might require two additional enzymes, as in land plants. Furthermore, Glaucophyta contained ZEA-type carotenoids, and Cryptophyta contained β-carotene, α-carotene, and alloxanthin, whose acetylenic group might be synthesized from zeaxanthin by an unknown enzyme. Therefore, we conclude that the presence or absence of the four enzymes is related to diversification of carotenoid composition in these three phyla.
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Affiliation(s)
- Shinichi Takaichi
- Department of Biology, Nippon Medical School, Musashino, 180-0023, Japan
| | - Akiko Yokoyama
- R&D Center for Algae Biomass and Energy System, University of Tsukuba, Tsukuba, 305-8572, Japan
| | - Mari Mochimaru
- Department of Natural Sciences, Komazawa University, Setagaya, Tokyo, 154-8525, Japan
| | - Hiroko Uchida
- Research Center for Inland Seas, Kobe University, Awaji, 656-2401, Japan
| | - Akio Murakami
- Research Center for Inland Seas, Kobe University, Awaji, 656-2401, Japan
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16
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Hamada F, Murakami A, Akimoto S. Comparative Analysis of Ultrafast Excitation Energy-Transfer Pathways in Three Strains of Divinyl Chlorophyll a/b-Containing Cyanobacterium, Prochlorococcus marinus. J Phys Chem B 2015; 119:15593-600. [DOI: 10.1021/acs.jpcb.5b10073] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Fumiya Hamada
- Graduate
School of Science, Kobe University, Kobe 657-8501, Japan
| | - Akio Murakami
- Graduate
School of Science, Kobe University, Kobe 657-8501, Japan
- Kobe University Research Center for Inland Seas, Awaji 656-2401, Japan
| | - Seiji Akimoto
- Graduate
School of Science, Kobe University, Kobe 657-8501, Japan
- Molecular
Photoscience Research Center, Kobe University, Kobe 657-8501, Japan
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17
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Qin X, Wang W, Chang L, Chen J, Wang P, Zhang J, He Y, Kuang T, Shen JR. Isolation and characterization of a PSI-LHCI super-complex and its sub-complexes from a siphonaceous marine green alga, Bryopsis Corticulans. PHOTOSYNTHESIS RESEARCH 2015; 123:61-76. [PMID: 25214185 DOI: 10.1007/s11120-014-0039-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2014] [Accepted: 09/03/2014] [Indexed: 05/24/2023]
Abstract
A novel super-complex of photosystem I (PSI)-light-harvesting complex I (LHCI) was isolated from a siphonaceous marine green alga, Bryopsis corticulans. The super-complex contained 9-10 Lhca antennas as external LHCI bound to the core complex. The super-complex was further disintegrated into PSI core and LHCI sub-complexes, and analysis of the pigment compositions by high-performance liquid chromatography revealed unique characteristics of the B. corticulans PSI in that one PSI core contained around 14 α-carotenes and 1-2 ε-carotenes. This is in sharp contrast to the PSI core from higher plants and most cyanobacteria where only β-carotenes were present, and is the first report for an α-carotene-type PSI core complex among photosynthetic eukaryotes, suggesting a structural flexibility of the PSI core. Lhca antennas from B. corticulans contained seven kinds of carotenoids (siphonaxanthin, all-trans neoxanthin, 9'-cis neoxanthin, violaxanthin, siphonein, ε-carotene, and α-carotene) and showed a high carotenoid:chlorophyll ratio of around 7.5:13. PSI-LHCI super-complex and PSI core showed fluorescence emission peaks at 716 and 718 nm at 77 K, respectively; whereas two Lhca oligomers had fluorescence peaks at 681 and 684 nm, respectively. By comparison with spinach PSI preparations, it was found that B. corticulans PSI had less red chlorophylls, most of them are present in the core complex but not in the outer light-harvesting systems. These characteristics may contribute to the fine tuning of the energy transfer network, and to acclimate to the ever-changing light conditions under which the unique green alga inhabits.
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Affiliation(s)
- Xiaochun Qin
- Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China,
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18
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Muthukrishnan T, Abed RMM, Dobretsov S, Kidd B, Finnie AA. Long-term microfouling on commercial biocidal fouling control coatings. BIOFOULING 2014; 30:1155-1164. [PMID: 25390938 DOI: 10.1080/08927014.2014.972951] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The current study investigated the microbial community composition of the biofilms that developed on 11 commercial biocidal coatings, including examples of the three main historic types, namely self-polishing copolymer (SPC), self-polishing hybrid (SPH) and controlled depletion polymer (CDP), after immersion in the sea for one year. The total wet weight of the biofilm and the total bacterial density were significantly influenced by all coatings. Pyrosequencing of 16S rRNA genes revealed distinct bacterial community structures on the different types of coatings. Flavobacteria accounted for the dissimilarity between communities developed on the control and SPC (16%) and the control and SPH coatings (17%), while Alphaproteobacteria contributed to 14% of the dissimilarity between the control and CDP coatings. The lowest number of operational taxonomic units was found on Intersmooth 100, while the lowest biomass and density of bacteria was detected on other SPC coatings. The experiments demonstrated that the nature and quantity of biofilm present differed from coating to coating with clear differences between copper-free and copper-based biocidal coatings.
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Affiliation(s)
- Thirumahal Muthukrishnan
- a Department of Marine Science and Fisheries , College of Agricultural and Marine Sciences, Sultan Qaboos University , Oman
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19
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Loughlin P, Lin Y, Chen M. Chlorophyll d and Acaryochloris marina: current status. PHOTOSYNTHESIS RESEARCH 2013; 116:277-93. [PMID: 23615924 DOI: 10.1007/s11120-013-9829-y] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2013] [Accepted: 04/14/2013] [Indexed: 05/03/2023]
Abstract
The discovery of the chlorophyll d-containing cyanobacterium Acaryochloris marina in 1996 precipitated a shift in our understanding of oxygenic photosynthesis. The presence of the red-shifted chlorophyll d in the reaction centre of the photosystems of Acaryochloris has opened up new avenues of research on photosystem energetics and challenged the unique status of chlorophyll a in oxygenic photosynthesis. In this review, we detail the chemistry and role of chlorophyll d in photosynthesis and summarise the unique adaptations that have allowed the proliferation of Acaryochloris in diverse ecological niches around the world.
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Affiliation(s)
- Patrick Loughlin
- School of Biological Sciences (A08), University of Sydney, Sydney, NSW, 2006, Australia
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20
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Domonkos I, Kis M, Gombos Z, Ughy B. Carotenoids, versatile components of oxygenic photosynthesis. Prog Lipid Res 2013; 52:539-61. [PMID: 23896007 DOI: 10.1016/j.plipres.2013.07.001] [Citation(s) in RCA: 141] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2013] [Revised: 07/19/2013] [Accepted: 07/19/2013] [Indexed: 12/13/2022]
Abstract
Carotenoids (CARs) are a group of pigments that perform several important physiological functions in all kingdoms of living organisms. CARs serve as protective agents, which are essential structural components of photosynthetic complexes and membranes, and they play an important role in the light harvesting mechanism of photosynthesizing plants and cyanobacteria. The protection against reactive oxygen species, realized by quenching of singlet oxygen and the excited states of photosensitizing molecules, as well as by the scavenging of free radicals, is one of the main biological functions of CARs. X-ray crystallographic localization of CARs revealed that they are present at functionally and structurally important sites of both the PSI and PSII reaction centers. Characterization of a CAR-less cyanobacterial mutant revealed that while the absence of CARs prevents the formation of PSII complexes, it does not abolish the assembly and function of PSI. CAR molecules assist in the formation of protein subunits of the photosynthetic complexes by gluing together their protein components. In addition to their aforementioned indispensable functions, CARs have a substantial role in the formation and maintenance of proper cellular architecture, and potentially also in the protection of the translational machinery under stress conditions.
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Affiliation(s)
- Ildikó Domonkos
- Institute of Plant Biology, Biological Research Centre of Hungarian Academy of Sciences, P.O. Box 521, H-6701 Szeged, Hungary
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