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Alvarez-Rivera G, Sanz A, Cifuentes A, Ibánez E, Paape T, Lucas MM, Pueyo JJ. Flavonoid Accumulation Varies in Medicago truncatula in Response to Mercury Stress. FRONTIERS IN PLANT SCIENCE 2022; 13:933209. [PMID: 35874019 PMCID: PMC9301243 DOI: 10.3389/fpls.2022.933209] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/30/2022] [Accepted: 06/21/2022] [Indexed: 06/15/2023]
Abstract
Mercury (Hg) contamination is increasing worldwide in both wild ecosystems and agricultural soils due to natural processes, but mostly to anthropic activities. The molecular mechanisms involved in Hg toxicity and tolerance in plants have been extensively studied; however, the role of flavonoids in response to Hg stress remains to be investigated. We conducted a metabolomic study to analyze the changes induced at the secondary metabolite level in three Hg-tolerant and one Hg-sensitive Medicago truncatula cultivars. A total of 46 flavonoid compounds, classified into five different flavonoid families: anthocyanidins, flavones, isoflavones, pterocarpan flavonoids, and flavanones, along with their respective glycoconjugate derivatives, were identified in leaf and root tissues. The synthesis of free isoflavones, followed by monoglycosylation and further malonylation was shown to be characteristic of root samples, whereas higher glycosylation, followed by further acylation with coumaric and ferulic acid was characteristic of leaf tissues. While minor changes were observed in leaves, significant quantitative changes could be observed in roots upon Hg treatment. Some flavonoids were strongly upregulated in roots, including malonylglucosides of biochanin A, formononetin and medicarpin, and aglycones biochanin, daidzein, and irisolidone. Hg tolerance appeared to be mainly associated to the accumulation of formononetin MalGlc, tricin GlcAGlcA, and afrormosin Glc II in leaves, whereas aglycone accumulation was associated with tolerance to Hg stress in roots. The results evidence the alteration of the flavonoid metabolic profile and their glycosylation processes in response to Hg stress. However, notable differences existed between varieties, both in the basal metabolic profile and in the response to treatment with Hg. Overall, we observed an increase in flavonoid production in response to Hg stress, and Hg tolerance appeared to be associated to a characteristic glycosylation pattern in roots, associated with the accumulation of aglycones and monoglycosylated flavonoids. The findings are discussed in the context of the flavonoid biosynthetic pathway to provide a better understanding of the role of these secondary metabolites in the response and tolerance to Hg stress in M. truncatula.
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Affiliation(s)
| | - Aurora Sanz
- Institute of Agricultural Sciences, ICA-CSIC, Madrid, Spain
| | - Alejandro Cifuentes
- Laboratory of Foodomics, CIAL-CSIC, Institute of Food Science Research, Madrid, Spain
| | - Elena Ibánez
- Laboratory of Foodomics, CIAL-CSIC, Institute of Food Science Research, Madrid, Spain
| | - Timothy Paape
- Brookhaven National Laboratory, Upton, NY, United States
| | | | - José J. Pueyo
- Institute of Agricultural Sciences, ICA-CSIC, Madrid, Spain
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2
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Rodríguez S, Correa-Galeote D, Sánchez-Pérez M, Ramírez M, Isidra-Arellano MC, Reyero-Saavedra MDR, Zamorano-Sánchez D, Hernández G, Valdés-López O, Girard L. A Novel OmpR-Type Response Regulator Controls Multiple Stages of the Rhizobium etli - Phaseolus vulgaris N 2-Fixing Symbiosis. Front Microbiol 2021; 11:615775. [PMID: 33384681 PMCID: PMC7769827 DOI: 10.3389/fmicb.2020.615775] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2020] [Accepted: 11/26/2020] [Indexed: 11/22/2022] Open
Abstract
OmpR, is one of the best characterized response regulators families, which includes transcriptional regulators with a variety of physiological roles including the control of symbiotic nitrogen fixation (SNF). The Rhizobium etli CE3 genome encodes 18 OmpR-type regulators; the function of the majority of these regulators during the SNF in common bean, remains elusive. In this work, we demonstrated that a R. etli mutant strain lacking the OmpR-type regulator RetPC57 (ΔRetPC57), formed less nodules when used as inoculum for common bean. Furthermore, we observed reduced expression level of bacterial genes involved in Nod Factors production (nodA and nodB) and of plant early-nodulation genes (NSP2, NIN, NF-YA and ENOD40), in plants inoculated with ΔRetPC57. RetPC57 also contributes to the appropriate expression of genes which products are part of the multidrug efflux pumps family (MDR). Interestingly, nodules elicited by ΔRetPC57 showed increased expression of genes relevant for Carbon/Nitrogen nodule metabolism (PEPC and GOGAT) and ΔRetPC57 bacteroids showed higher nitrogen fixation activity as well as increased expression of key genes directly involved in SNF (hfixL, fixKf, fnrN, fixN, nifA and nifH). Taken together, our data show that the previously uncharacterized regulator RetPC57 is a key player in the development of the R. etli - P. vulgaris symbiosis.
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Affiliation(s)
- Susana Rodríguez
- Programa de Biología de Sistemas y Biología Sintética, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico
| | - David Correa-Galeote
- Programa de Biología de Sistemas y Biología Sintética, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico
| | - Mishael Sánchez-Pérez
- Programa de Biología de Sistemas y Biología Sintética, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico.,Programa de Genómica Computacional, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico
| | - Mario Ramírez
- Programa de Genómica Funcional de Eucariontes, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico
| | - Mariel C Isidra-Arellano
- Laboratorio de Genómica Funcional de Leguminosas, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla de Baz, Mexico
| | - María Del Rocío Reyero-Saavedra
- Laboratorio de Genómica Funcional de Leguminosas, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla de Baz, Mexico
| | - David Zamorano-Sánchez
- Programa de Biología de Sistemas y Biología Sintética, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico
| | - Georgina Hernández
- Programa de Genómica Funcional de Eucariontes, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico
| | - Oswaldo Valdés-López
- Laboratorio de Genómica Funcional de Leguminosas, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla de Baz, Mexico
| | - Lourdes Girard
- Programa de Biología de Sistemas y Biología Sintética, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico
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El-Gazzar N, Almaary K, Ismail A, Polizzi G. Influence of Funneliformis mosseae enhanced with titanium dioxide nanoparticles (TiO2NPs) on Phaseolus vulgaris L. under salinity stress. PLoS One 2020; 15:e0235355. [PMID: 32817671 PMCID: PMC7446817 DOI: 10.1371/journal.pone.0235355] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Accepted: 06/14/2020] [Indexed: 11/18/2022] Open
Abstract
The Arbuscular mycorrhizal fungi (AMF) (Funneliformis mosseae), are the most widely distributed symbiont assisting plants to overcome counteractive environmental conditions. In order to improve the sustainability and the activity of AMF, the use of nanotechnology was important. The main objective of this study was to investigate the effect of titanium dioxide nanoparticles (TiO2NPs) on the activity of AMF in common bean roots as well as its activity under salinity stress using morphological and molecular methods. The activity of AMF colonization has increased in the presence of TiO2NPs especially for arbuscule activity (A%), which increased three times with the presence of TiO2NPs. The improvement rate of Funneliformis mosseae on plant growth increased from 180% to 224% of control at the lowest level of salinity and increased from 48% to 130% at higher salinity level, respectively. The AMF dependencies for plant dry biomass increased in the presence of TiO2NPs from 277% in the absence of salinity to 465 and 883% % at low and high salinity levels, respectively. The presence of AMF co-inoculated with TiO2NPs resulted in increasing the salinity tolerance of plants at all levels and reached 110% at salinity level of 100 mM NaCl. Quantitative colonization methods showed that the molecular intensity ratio and the relative density of paired inocula AMF Nest (NS) or chitin synthases gene (Chs) with TiO2NPs were higher significantly P.>0.05 than single inoculants of AMF gene in roots under the presence or the absence of salinity by about two folds and about 40%. Hence, the positive effect of TiO2NPs was confined to its effect on AMF not on bean plants itself.
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Affiliation(s)
- Nashwa El-Gazzar
- Botany and Microbiology Department, Faculty of Science, Zagazig University, Zagazig, Egypt
- * E-mail:
| | - Khalid Almaary
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Ahmed Ismail
- Plant Pathology Research Institute, Agricultural Research Center, Giza, Egypt
| | - Giancarlo Polizzi
- Dipartimento di Gestionedei Sistemi Agroalimentari e Ambientali, Sezione di Patologia Vegetale, Catania, Italy
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Stambulska UY, Bayliak MM. Legume-Rhizobium Symbiosis: Secondary Metabolites, Free Radical Processes, and Effects of Heavy Metals. BIOACTIVE MOLECULES IN FOOD 2019. [DOI: 10.1007/978-3-319-76887-8_43-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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Liu A, Contador CA, Fan K, Lam HM. Interaction and Regulation of Carbon, Nitrogen, and Phosphorus Metabolisms in Root Nodules of Legumes. FRONTIERS IN PLANT SCIENCE 2018; 9:1860. [PMID: 30619423 PMCID: PMC6305480 DOI: 10.3389/fpls.2018.01860] [Citation(s) in RCA: 60] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2018] [Accepted: 11/30/2018] [Indexed: 05/19/2023]
Abstract
Members of the plant family Leguminosae (Fabaceae) are unique in that they have evolved a symbiotic relationship with rhizobia (a group of soil bacteria that can fix atmospheric nitrogen). Rhizobia infect and form root nodules on their specific host plants before differentiating into bacteroids, the symbiotic form of rhizobia. This complex relationship involves the supply of C4-dicarboxylate and phosphate by the host plants to the microsymbionts that utilize them in the energy-intensive process of fixing atmospheric nitrogen into ammonium, which is in turn made available to the host plants as a source of nitrogen, a macronutrient for growth. Although nitrogen-fixing bacteroids are no longer growing, they are metabolically active. The symbiotic process is complex and tightly regulated by both the host plants and the bacteroids. The metabolic pathways of carbon, nitrogen, and phosphate are heavily regulated in the host plants, as they need to strike a fine balance between satisfying their own needs as well as those of the microsymbionts. A network of transporters for the various metabolites are responsible for the trafficking of these essential molecules between the two partners through the symbiosome membrane (plant-derived membrane surrounding the bacteroid), and these are in turn regulated by various transcription factors that control their expressions under different environmental conditions. Understanding this complex process of symbiotic nitrogen fixation is vital in promoting sustainable agriculture and enhancing soil fertility.
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Affiliation(s)
- Ailin Liu
- Centre for Soybean Research, State Key Laboratory of Agrobiotechnology, Shatin, Hong Kong
- School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
| | - Carolina A. Contador
- Centre for Soybean Research, State Key Laboratory of Agrobiotechnology, Shatin, Hong Kong
- School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
| | - Kejing Fan
- Centre for Soybean Research, State Key Laboratory of Agrobiotechnology, Shatin, Hong Kong
- School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
| | - Hon-Ming Lam
- Centre for Soybean Research, State Key Laboratory of Agrobiotechnology, Shatin, Hong Kong
- School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
- *Correspondence: Hon-Ming Lam,
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Hui F, Liu J, Gao Q, Lou B. Piriformospora indica confers cadmium tolerance in Nicotiana tabacum. J Environ Sci (China) 2015; 37:184-91. [PMID: 26574103 DOI: 10.1016/j.jes.2015.06.005] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2014] [Revised: 05/12/2015] [Accepted: 06/03/2015] [Indexed: 06/05/2023]
Abstract
Piriformospora indica, a root-colonizing endophytic fungus of Sebacinales, promotes plant growth and confers resistance against biotic and abiotic stresses. In order to confirm the influence of P. indica on growth, proline, malondialdehyde (MDA), chlorophyll, and cadmium (Cd) amounts in Nicotiana tabacum under Cd stress, hydroponics, pot and field trials were conducted. The results showed that P. indica can store Cd in plant roots and reduce leaf Cd content, reduce the concentration of MDA, and increase the proline and chlorophyll content and the activities of catalase, peroxidase, and superoxide dismutase under hydroponic Cd stress. RT-PCR analysis showed that the relative expression level of genes Gsh2, TaPCS1, oas1, GPX, and Hsp70 in colonized plants was 4.3, 1.4, 2.9, 1.7, and 6.9 fold higher than in un-colonized plants respectively. Cd exposure significantly reduced un-colonized plants' agronomic traits compared to P. indica-colonized ones. Our results suggested that P. indica can sequester Cd in roots, so that much less cadmium was transported to leaves, and the increased concentrations of antioxidant enzymes, pigments and proline contents, as well as the higher expression of stress-related phytochelatin biosynthesis genes in P. indica-inoculated plants, may also serve to protect N. tabacum plants against oxidative damage, enhancing Cd tolerance.
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Affiliation(s)
- Feiqiong Hui
- Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China; China Tobacco Guizhou Industrial Co., Ltd., Guiyang 550001, China.
| | - Jian Liu
- China Tobacco Guizhou Industrial Co., Ltd., Guiyang 550001, China
| | - Qikang Gao
- Analysis Center of Agrobiology and Environmental Sciences, Zhejiang University, China
| | - Binggan Lou
- Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China.
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7
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Kalloniati C, Krompas P, Karalias G, Udvardi MK, Rennenberg H, Herschbach C, Flemetakis E. Nitrogen-Fixing Nodules Are an Important Source of Reduced Sulfur, Which Triggers Global Changes in Sulfur Metabolism in Lotus japonicus. THE PLANT CELL 2015; 27:2384-400. [PMID: 26296963 PMCID: PMC4815097 DOI: 10.1105/tpc.15.00108] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2015] [Revised: 07/20/2015] [Accepted: 08/03/2015] [Indexed: 05/09/2023]
Abstract
We combined transcriptomic and biochemical approaches to study rhizobial and plant sulfur (S) metabolism in nitrogen (N) fixing nodules (Fix(+)) of Lotus japonicus, as well as the link of S-metabolism to symbiotic nitrogen fixation and the effect of nodules on whole-plant S-partitioning and metabolism. Our data reveal that N-fixing nodules are thiol-rich organs. Their high adenosine 5'-phosphosulfate reductase activity and strong (35)S-flux into cysteine and its metabolites, in combination with the transcriptional upregulation of several rhizobial and plant genes involved in S-assimilation, highlight the function of nodules as an important site of S-assimilation. The higher thiol content observed in nonsymbiotic organs of N-fixing plants in comparison to uninoculated plants could not be attributed to local biosynthesis, indicating that nodules are an important source of reduced S for the plant, which triggers whole-plant reprogramming of S-metabolism. Enhanced thiol biosynthesis in nodules and their impact on the whole-plant S-economy are dampened in plants nodulated by Fix(-) mutant rhizobia, which in most respects metabolically resemble uninoculated plants, indicating a strong interdependency between N-fixation and S-assimilation.
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Affiliation(s)
- Chrysanthi Kalloniati
- Department of Biotechnology, Agricultural University of Athens, 11855 Athens, Greece
| | - Panagiotis Krompas
- Department of Biotechnology, Agricultural University of Athens, 11855 Athens, Greece
| | - Georgios Karalias
- Department of Biotechnology, Agricultural University of Athens, 11855 Athens, Greece
| | - Michael K Udvardi
- Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401
| | - Heinz Rennenberg
- Institute of Forest Sciences, Chair of Tree Physiology, Faculty of Environment and Natural Resources, Albert-Ludwigs-University Freiburg, 79110 Freiburg, Germany College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Cornelia Herschbach
- Institute of Forest Sciences, Chair of Tree Physiology, Faculty of Environment and Natural Resources, Albert-Ludwigs-University Freiburg, 79110 Freiburg, Germany
| | - Emmanouil Flemetakis
- Department of Biotechnology, Agricultural University of Athens, 11855 Athens, Greece
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8
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Tkacz A, Poole P. Role of root microbiota in plant productivity. JOURNAL OF EXPERIMENTAL BOTANY 2015; 66:2167-75. [PMID: 25908654 PMCID: PMC4986727 DOI: 10.1093/jxb/erv157] [Citation(s) in RCA: 96] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2015] [Revised: 03/09/2015] [Accepted: 03/12/2015] [Indexed: 05/19/2023]
Abstract
The growing human population requires increasing amounts of food, but modern agriculture has limited possibilities for increasing yields. New crop varieties may be bred to have increased yields and be more resistant to environmental stress and pests. However, they still require fertilization to supplement essential nutrients that are normally limited in the soil. Soil microorganisms present an opportunity to reduce the requirement for inorganic fertilization in agriculture. Microorganisms, due to their enormous genetic pool, are also a potential source of biochemical reactions that recycle essential nutrients for plant growth. Microbes that associate with plants can be considered to be part of the plant's pan-genome. Therefore, it is essential for us to understand microbial community structure and their 'metagenome' and how it is influenced by different soil types and crop varieties. In the future we may be able to modify and better utilize the soil microbiota potential for promoting plant growth.
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Affiliation(s)
- Andrzej Tkacz
- Department of Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK
| | - Philip Poole
- Department of Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK
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Smith FA, Smith SE. How harmonious are arbuscular mycorrhizal symbioses? Inconsistent concepts reflect different mindsets as well as results. THE NEW PHYTOLOGIST 2015; 205:1381-1384. [PMID: 25420770 DOI: 10.1111/nph.13202] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Affiliation(s)
- F Andrew Smith
- Soil Science, School of Agriculture, Food & Wine, the University of Adelaide, Adelaide, SA, 5005, Australia
| | - Sally E Smith
- Soil Science, School of Agriculture, Food & Wine, the University of Adelaide, Adelaide, SA, 5005, Australia
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Robert G, Muñoz N, Melchiorre M, Sánchez F, Lascano R. Expression of animal anti-apoptotic gene Ced-9 enhances tolerance during Glycine max L.-Bradyrhizobium japonicum interaction under saline stress but reduces nodule formation. PLoS One 2014; 9:e101747. [PMID: 25050789 PMCID: PMC4106779 DOI: 10.1371/journal.pone.0101747] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2014] [Accepted: 06/10/2014] [Indexed: 12/30/2022] Open
Abstract
The mechanisms by which the expression of animal cell death suppressors in economically important plants conferred enhanced stress tolerance are not fully understood. In the present work, the effect of expression of animal antiapoptotic gene Ced-9 in soybean hairy roots was evaluated under root hairs and hairy roots death-inducing stress conditions given by i) Bradyrhizobium japonicum inoculation in presence of 50 mM NaCl, and ii) severe salt stress (150 mM NaCl), for 30 min and 3 h, respectively. We have determined that root hairs death induced by inoculation in presence of 50 mM NaCl showed characteristics of ordered process, with increased ROS generation, MDA and ATP levels, whereas the cell death induced by 150 mM NaCl treatment showed non-ordered or necrotic-like characteristics. The expression of Ced-9 inhibited or at least delayed root hairs death under these treatments. Hairy roots expressing Ced-9 had better homeostasis maintenance, preventing potassium release; increasing the ATP levels and controlling the oxidative damage avoiding the increase of reactive oxygen species production. Even when our results demonstrate a positive effect of animal cell death suppressors in plant cell ionic and redox homeostasis under cell death-inducing conditions, its expression, contrary to expectations, drastically inhibited nodule formation even under control conditions.
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Affiliation(s)
- Germán Robert
- Instituto de Fisiología y Recursos Genéticos Vegetales, Centro de Investigaciones Agropecuarias-INTA, Córdoba, Argentina
- Cátedra de Fisiología Vegetal, Facultad de Ciencias Exactas Físicas y Naturales, Universidad Nacional de Córdoba, Córdoba, Argentina
| | - Nacira Muñoz
- Instituto de Fisiología y Recursos Genéticos Vegetales, Centro de Investigaciones Agropecuarias-INTA, Córdoba, Argentina
- Cátedra de Fisiología Vegetal, Facultad de Ciencias Exactas Físicas y Naturales, Universidad Nacional de Córdoba, Córdoba, Argentina
| | - Mariana Melchiorre
- Instituto de Fisiología y Recursos Genéticos Vegetales, Centro de Investigaciones Agropecuarias-INTA, Córdoba, Argentina
| | - Federico Sánchez
- Departamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México
| | - Ramiro Lascano
- Instituto de Fisiología y Recursos Genéticos Vegetales, Centro de Investigaciones Agropecuarias-INTA, Córdoba, Argentina
- Cátedra de Fisiología Vegetal, Facultad de Ciencias Exactas Físicas y Naturales, Universidad Nacional de Córdoba, Córdoba, Argentina
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Yoon HJ, Hossain MS, Held M, Hou H, Kehl M, Tromas A, Sato S, Tabata S, Andersen SU, Stougaard J, Ross L, Szczyglowski K. Lotus japonicus SUNERGOS1 encodes a predicted subunit A of a DNA topoisomerase VI that is required for nodule differentiation and accommodation of rhizobial infection. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2014; 78:811-21. [PMID: 24661810 PMCID: PMC4282747 DOI: 10.1111/tpj.12520] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2013] [Revised: 02/13/2014] [Accepted: 03/05/2014] [Indexed: 05/05/2023]
Abstract
A symbiotic mutant of Lotus japonicus, called sunergos1-1 (suner1-1), originated from a har1-1 suppressor screen. suner1-1 supports epidermal infection by Mesorhizobium loti and initiates cell divisions for organogenesis of nodule primordia. However, these processes appear to be temporarily stalled early during symbiotic interaction, leading to a low nodule number phenotype. This defect is ephemeral and near wild-type nodule numbers are reached by suner1-1 at a later point after infection. Using an approach that combined map-based cloning and next-generation sequencing we have identified the causative mutation and show that the suner1-1 phenotype is determined by a weak recessive allele, with the corresponding wild-type SUNER1 locus encoding a predicted subunit A of a DNA topoisomerase VI. Our data suggest that at least one function of SUNER1 during symbiosis is to participate in endoreduplication, which is an essential step during normal differentiation of functional, nitrogen-fixing nodules.
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Affiliation(s)
- Hwi Joong Yoon
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research CentreLondon, ON, N5V 4T3, Canada
- Department of Biology, University of Western OntarioLondon, ON, N6A 5B7, Canada
| | - Md Shakhawat Hossain
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research CentreLondon, ON, N5V 4T3, Canada
| | - Mark Held
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research CentreLondon, ON, N5V 4T3, Canada
- Department of Biology, University of Western OntarioLondon, ON, N6A 5B7, Canada
| | - Hongwei Hou
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research CentreLondon, ON, N5V 4T3, Canada
| | - Marilyn Kehl
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research CentreLondon, ON, N5V 4T3, Canada
- Department of Biology, University of Western OntarioLondon, ON, N6A 5B7, Canada
| | - Alexandre Tromas
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research CentreLondon, ON, N5V 4T3, Canada
| | - Shusei Sato
- Kazusa DNA Research InstituteKisarazu, Chiba, 292-0812, Japan
| | - Satoshi Tabata
- Kazusa DNA Research InstituteKisarazu, Chiba, 292-0812, Japan
| | - Stig Uggerhøj Andersen
- Centre for Carbohydrate Recognition and Signalling, Department of Molecular Biology and Genetics, Aarhus UniversityGustav Wieds Vej 10, 8000, Aarhus C, Denmark
| | - Jens Stougaard
- Centre for Carbohydrate Recognition and Signalling, Department of Molecular Biology and Genetics, Aarhus UniversityGustav Wieds Vej 10, 8000, Aarhus C, Denmark
| | - Loretta Ross
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research CentreLondon, ON, N5V 4T3, Canada
| | - Krzysztof Szczyglowski
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research CentreLondon, ON, N5V 4T3, Canada
- Department of Biology, University of Western OntarioLondon, ON, N6A 5B7, Canada
- *For correspondence (e-mail )
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Abd-Alla MH, Bagy MK, El-enany AWES, Bashandy SR. Activation of Rhizobium tibeticum with flavonoids enhances nodulation, nitrogen fixation, and growth of fenugreek (Trigonella foenum-graecum L.) grown in cobalt-polluted soil. ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2014; 66:303-315. [PMID: 24366585 DOI: 10.1007/s00244-013-9980-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2013] [Accepted: 12/03/2013] [Indexed: 06/03/2023]
Abstract
The goal of this study was to investigate the response of activation of Rhizobium tibeticum with mixture of hesperetin and apigenin to improve growth, nodulation, and nitrogen fixation of fenugreek grown under cobalt (Co) stress. The current study showed that high concentrations of Co-induced noxious effects on rhizobial growth, nod gene expression, nodulation, phenylalanine ammonia-lyase (PAL) and glutamine synthetase (GS) activities, total flavonoid content, and nitrogen fixation. Addition of a mixture of hesperetin and apigenin to growth medium supplemented with different concentrations of Co significantly increased bacterial growth. PAL activity of roots grown hydroponically at 100 mg kg(-1) Co and inoculated with induced R. tibeticum was significantly increased compared with plants receiving uninduced R. tibeticum. Total flavonoid content of root exudates of plants inoculated with activated R. tibeticum was significantly increased compared with inoculated plants with unactivated R. tibeticum or uninoculated plants at variant Co dosages. Application of 50 mg kg(-1) Co significantly increased nodulation, GS, nitrogenase activity, and biomass of plants inoculated with either or uninduced R. tibeticum. The total number and fresh mass of nodules, nitrogenase activity, and biomass of plants inoculated with induced cells grown in soil treated with 100 and 200 mg kg(-1) Co were significantly increased compared with plants inoculated with uninduced cells. Induced R. tibeticum with flavonoids significantly alleviates the adverse effect of Co on nod gene expression and therefore enhances nitrogen fixation. Induction of R. tibeticum with compatible flavonoids could be of practical importance in augmenting growth and nitrogen fixation of fenugreek grown in a Co-contaminated agroecosystem.
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Affiliation(s)
- Mohamed Hemida Abd-Alla
- Botany and Microbiology Department, Faculty of Science, Assiut University, Assuit, 71516, Egypt
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13
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Hogekamp C, Arndt D, Pereira PA, Becker JD, Hohnjec N, Küster H. Laser microdissection unravels cell-type-specific transcription in arbuscular mycorrhizal roots, including CAAT-box transcription factor gene expression correlating with fungal contact and spread. PLANT PHYSIOLOGY 2011; 157:2023-43. [PMID: 22034628 PMCID: PMC3327204 DOI: 10.1104/pp.111.186635] [Citation(s) in RCA: 131] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2011] [Accepted: 10/26/2011] [Indexed: 05/20/2023]
Abstract
Arbuscular mycorrhizae (AM) are the most widespread symbioses on Earth, promoting nutrient supply of most terrestrial plant species. To unravel gene expression in defined stages of Medicago truncatula root colonization by AM fungi, we here combined genome-wide transcriptome profiling based on whole mycorrhizal roots with real-time reverse transcription-PCR experiments that relied on characteristic cell types obtained via laser microdissection. Our genome-wide approach delivered a core set of 512 genes significantly activated by the two mycorrhizal fungi Glomus intraradices and Glomus mossae. Focusing on 62 of these genes being related to membrane transport, signaling, and transcriptional regulation, we distinguished whether they are activated in arbuscule-containing or the neighboring cortical cells harboring fungal hyphae. In addition, cortical cells from nonmycorrhizal roots served as a reference for gene expression under noncolonized conditions. Our analysis identified 25 novel arbuscule-specific genes and 37 genes expressed both in the arbuscule-containing and the adjacent cortical cells colonized by fungal hyphae. Among the AM-induced genes specifying transcriptional regulators were two members encoding CAAT-box binding transcription factors (CBFs), designated MtCbf1 and MtCbf2. Promoter analyses demonstrated that both genes were already activated by the first physical contact between the symbionts. Subsequently, and corresponding to our cell-type expression patterns, they were progressively up-regulated in those cortical areas colonized by fungal hyphae, including the arbuscule-containing cells. The encoded CBFs thus represent excellent candidates for regulators that mediate a sequential reprogramming of root tissues during the establishment of an AM symbiosis.
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Affiliation(s)
| | | | | | | | | | - Helge Küster
- Institut für Pflanzengenetik, Leibniz Universität Hannover, D–30419 Hannover, Germany (C.H., D.A., N.H., H.K.); Instituto Gulbenkian de Ciência, 2780–156 Oeiras, Portugal (P.A.P., J.D.B.)
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15
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Smith SE, Smith FA. Fresh perspectives on the roles of arbuscular mycorrhizal fungi in plant nutrition and growth. Mycologia 2011; 104:1-13. [PMID: 21933929 DOI: 10.3852/11-229] [Citation(s) in RCA: 120] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Recent research on arbuscular mycorrhizas has demonstrated that AM fungi play a significant role in plant phosphorus (P) uptake, regardless of whether the plant responds positively to colonization in terms of growth or P content. Here we focus particularly on implications of this finding for consideration of the balance between organic carbon (C) use by the fungi and P delivery (i.e. the C-P trade between the symbionts). Positive growth responses to arbuscular mycorrhizal (AM) colonization are attributed frequently to increased P uptake via the fungus, which results in relief of P deficiency and increased growth. Zero AM responses, compared with non-mycorrhizal (NM) plants, have conventionally been attributed to failure of the fungi to deliver P to the plants. Negative responses, combined with excessive C use, have been attributed to this failure. The fungi were viewed as parasites. Demonstration that the AM pathway of P uptake operates in such plants indicates that direct P uptake by the roots is reduced and that the fungi are not parasites but mutualists because they deliver P as well as using C. We suggest that poor plant growth is the result of P deficiency because AM fungi lower the amount of P taken up directly by roots but the AM uptake of P does compensate for the reduction. The implications of interplay between direct root uptake and AM fungal uptake of P also include increased tolerance of AM plants to toxins such as arsenate and increased success when competing with NM plants. Finally we discuss the new information on C-P trade in the context of control of the symbiosis by the fungus or the plant, including new information (from NM plants) on sugar transport and on the role of sucrose in the signaling network involved in responses of plants to P deprivation.
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Affiliation(s)
- Sally E Smith
- University of Adelaide, Adelaide, South Australia, Australia.
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Tavasolee A, Aliasgharzad N, Salehi GR, Mardi M, Asgharzadeh A, Akbarivala S. Effects of Co-Inoculation with Arbuscular Mycorrhizal Fungi and Rhizobia on Fungal Occupancy in Chickpea Root and Nodule Determined by Real-Time PCR. Curr Microbiol 2011; 63:107-14. [DOI: 10.1007/s00284-011-9951-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2010] [Accepted: 04/18/2011] [Indexed: 10/18/2022]
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Kang H, Zhu H, Chu X, Yang Z, Yuan S, Yu D, Wang C, Hong Z, Zhang Z. A novel interaction between CCaMK and a protein containing the Scythe_N ubiquitin-like domain in Lotus japonicus. PLANT PHYSIOLOGY 2011; 155:1312-24. [PMID: 21209278 PMCID: PMC3046588 DOI: 10.1104/pp.110.167965] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2010] [Accepted: 01/02/2011] [Indexed: 05/18/2023]
Abstract
In the Rhizobium-legume symbiosis, calcium/calmodulin-dependent protein kinase (CCaMK) is a key regulator for both rhizobial infection and nodule organogenesis. Deregulation of CCaMK by either a point mutation in the autophosphorylation site or the deletion of the carboxyl-terminal regulatory domain results in spontaneous nodule formation without rhizobia. However, the underlying biochemical mechanisms are poorly understood. Here, using the kinase domain of CCaMK as a bait in yeast two-hybrid screening, we identify a novel protein, CIP73 (for CCaMK-interacting protein of approximately 73 kD), that interacts with CCaMK. CIP73 contains a Scythe_N ubiquitin-like domain and belongs to the large ubiquitin superfamily. Deletion and mutagenesis analysis demonstrate that CIP73 could only interact with CCaMK when the calmodulin-binding domain and three EF-hand motifs are removed from the kinase domain. The amino-terminal 80 amino acid residues (80-160) of CCaMK are required for interacting with CIP73 in yeast cells. On the other hand, protein pull-down assay and bimolecular fluorescence complementation assay in Nicotiana benthamiana show that the full-length CCaMK could interact with CIP73 in vitro and in planta. Importantly, CCaMK phosphorylates the amino terminus of CIP73 in a Ca2+/calmodulin-dependent manner in vitro. CIP73 transcripts are preferentially expressed in roots, and very low expression is detected in leaves, stems, and nodules. The expression in roots is significantly decreased after inoculation of Mesorhizobium loti. RNA interference knockdown of CIP73 expression by hairy root transformation in Lotus japonicus led to decreased nodule formation, suggesting that CIP73 performed an essential role in nodulation.
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Affiliation(s)
| | | | | | | | | | | | | | | | - Zhongming Zhang
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China (H.K., H.Z., X.C., Z.Y., S.Y., D.Y., C.W., Z.Z.); Department of Microbiology, Molecular Biology, and Biochemistry, University of Idaho, Moscow, Idaho 83844–3052 (Z.H.)
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18
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Henckel K, Küster H, Stutz LJ, Goesmann A. MediPlEx - a tool to combine in silico & experimental gene expression profiles of the model legume Medicago truncatula. BMC Res Notes 2010; 3:262. [PMID: 20958970 PMCID: PMC2972298 DOI: 10.1186/1756-0500-3-262] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2010] [Accepted: 10/19/2010] [Indexed: 12/01/2022] Open
Abstract
BACKGROUND Expressed Sequence Tags (ESTs) are in general used to gain a first insight into gene activities from a species of interest. Subsequently, and typically based on a combination of EST and genome sequences, microarray-based expression analyses are performed for a variety of conditions. In some cases, a multitude of EST and microarray experiments are conducted for one species, covering different tissues, cell states, and cell types. Under these circumstances, the challenge arises to combine results derived from the different expression profiling strategies, with the goal to uncover novel information on the basis of the integrated datasets. FINDINGS Using our new analysis tool, MediPlEx (MEDIcago truncatula multiPLe EXpression analysis), expression data from EST experiments, oligonucleotide microarrays and Affymetrix GeneChips® can be combined and analyzed, leading to a novel approach to integrated transcriptome analysis. We have validated our tool via the identification of a set of well-characterized AM-specific and AM-induced marker genes, identified by MediPlEx on the basis of in silico and experimental gene expression profiles from roots colonized with AM fungi. CONCLUSIONS MediPlEx offers an integrated analysis pipeline for different sets of expression data generated for the model legume Medicago truncatula. As expected, in silico and experimental gene expression data that cover the same biological condition correlate well. The collection of differentially expressed genes identified via MediPlEx provides a starting point for functional studies in plant mutants. MediPlEx can freely be used at http://www.cebitec.uni-bielefeld.de/mediplex.
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Affiliation(s)
- Kolja Henckel
- Bioinformatics of Signaling Networks, Center for Biotechnology, Bielefeld University, Germany
| | - Helge Küster
- Unit IV - Plant Genomics, Institute for Plant Genetics, Leibniz Universität Hannover, Germany
| | - Leonhard J Stutz
- Computational Genomics, Center for Biotechnology, Bielefeld University, Germany
- Technical Faculty, Bielefeld University, Germany
| | - Alexander Goesmann
- Computational Genomics, Center for Biotechnology, Bielefeld University, Germany
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Sun C, Johnson JM, Cai D, Sherameti I, Oelmüller R, Lou B. Piriformospora indica confers drought tolerance in Chinese cabbage leaves by stimulating antioxidant enzymes, the expression of drought-related genes and the plastid-localized CAS protein. JOURNAL OF PLANT PHYSIOLOGY 2010; 167:1009-17. [PMID: 20471134 DOI: 10.1016/j.jplph.2010.02.013] [Citation(s) in RCA: 155] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2009] [Revised: 02/03/2010] [Accepted: 02/03/2010] [Indexed: 05/05/2023]
Abstract
Piriformospora indica, a root-colonizing endophytic fungus of Sebacinales, promotes plant growth and confers resistance against biotic and abiotic stress. The fungus strongly colonizes the roots of Chinese cabbage, promotes root and shoot growth, and promotes lateral root formation. When colonized plants were exposed to polyethylene glycol to mimic drought stress, the activities of peroxidases, catalases and superoxide dismutases in the leaves were upregulated within 24h. The fungus retarded the drought-induced decline in the photosynthetic efficiency and the degradation of chlorophylls and thylakoid proteins. The expression levels of the drought-related genes DREB2A, CBL1, ANAC072 and RD29A were upregulated in the drought-stressed leaves of colonized plants. Furthermore, the CAS mRNA level for the thylakoid membrane associated Ca(2+)-sensing regulator and the amount of the CAS protein increased. We conclude that antioxidant enzyme activities, drought-related genes and CAS are three crucial targets of P. indica in Chinese cabbage leaves during the establishment of drought tolerance. P. indica-colonized Chinese cabbage provides a good model system to study root-to-shoot communication.
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Affiliation(s)
- Chao Sun
- Institute of Plant Physiology, Friedrich-Schiller-University Jena, Jena, Germany
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20
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Dermatsev V, Weingarten-Baror C, Resnick N, Gadkar V, Wininger S, Kolotilin I, Mayzlish-Gati E, Zilberstein A, Koltai H, Kapulnik Y. Microarray analysis and functional tests suggest the involvement of expansins in the early stages of symbiosis of the arbuscular mycorrhizal fungus Glomus intraradices on tomato (Solanum lycopersicum). MOLECULAR PLANT PATHOLOGY 2010; 11:121-35. [PMID: 20078781 PMCID: PMC6640415 DOI: 10.1111/j.1364-3703.2009.00581.x] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Arbuscular mycorrhizal (AM) symbiosis occurs between fungi of the phylum Glomeromycota and most terrestrial plants. However, little is known about the molecular symbiotic signalling between AM fungi (AMFs) and non-leguminous plant species. We sought to further elucidate the molecular events occurring in tomato, a non-leguminous host plant, during the early, pre-symbiotic stage of AM symbiosis, i.e. immediately before and after contact between the AMF (Glomus intraradices) and the host. We adopted a semi-synchronized AMF root infection protocol, followed by genomic-scale, microarray-based, gene expression profiling at several defined time points during pre-symbiotic AM stages. The microarray results suggested differences in the number of differentially expressed genes and in the differential regulation of several functional groups of genes at the different time points examined. The microarray results were validated and one of the genes induced during contact between AMF and tomato, the expansin-like EXLB1, was functionally analysed. Expansins, encoded by a large multigene family, facilitate plant cell expansion. However, no biological or biochemical function has yet been established for plant-originated expansin-like proteins. EXLB1 transcripts were localized early during the association to cells that may perceive the fungal signal, and later during the association in close proximity to sites of AMF hypha-root colonization. Moreover, in transgenic roots, we demonstrated that a reduction in the steady-state level of EXLB1 transcript was correlated with a reduced rate of infection, reduced arbuscule expansion and reduced AMF spore formation.
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Affiliation(s)
- Vladimir Dermatsev
- Department of Agronomy and Natural Resources, Institute of Plant Sciences, Agricultural Research Organization (ARO), The Volcani Center, PO Box 6, Bet Dagan 50250, Israel
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21
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Vadassery J, Oelmüller R. Calcium signaling in pathogenic and beneficial plant microbe interactions: what can we learn from the interaction between Piriformospora indica and Arabidopsis thaliana. PLANT SIGNALING & BEHAVIOR 2009; 4:1024-7. [PMID: 19829075 PMCID: PMC2819509 DOI: 10.4161/psb.4.11.9800] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2009] [Accepted: 08/12/2009] [Indexed: 05/19/2023]
Abstract
Elevation of intracellular calcium levels in a plant cell is an early signaling event in many mutualistic and pathogenic plant/microbe interactions. In pathogenic plant/fungus interactions, receptor-mediated cytoplasmic calcium elevations induce defense genes via the activation of ion fluxes at the plasma membrane, an oxidative burst and MAPK activation. Mycorrhizal and beneficial endophytic plant/fungus interactions result in a better plant performance through sequencial cytoplasmic and nuclear calcium elevations. The specificity of the calcium responses depends on the calcium signature, its amplitude, duration, frequency and location, a selective activation of calcium channels in the diverse cellular membranes and the stimulation of calcium-dependent signaling components. Arabidopsis contains more than 100 genes for calcium-binding proteins and channels and the response to pathogens and beneficial fungi relies on a highly specific activation of individual members of these protein families. Genetic tools are required to understand this complex response patterns and the cross talks between the individual calcium-dependent signaling pathways. The beneficial interaction of Arabidopsis with the growth-promoting endophyte Piriformospora indica provides a nice model system to unravel signaling events leading to mutualistic or pathogenic plant/fungus interactions.
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Affiliation(s)
| | - Ralf Oelmüller
- Institut für Allgemeine Botanik und Pflanzenphysiologie; Jena, Germany
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Jasiński M, Kachlicki P, Rodziewicz P, Figlerowicz M, Stobiecki M. Changes in the profile of flavonoid accumulation in Medicago truncatula leaves during infection with fungal pathogen Phoma medicaginis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2009; 47:847-53. [PMID: 19541494 DOI: 10.1016/j.plaphy.2009.05.004] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2008] [Revised: 05/20/2009] [Accepted: 05/22/2009] [Indexed: 05/13/2023]
Abstract
Medicago truncatula is a model species for the study of the unique secondary metabolism in legumes. LC/MS/MS analysis was used to identify and profile flavonoid glycoconjugates and free aglycones in leaves of M. truncatula (ecotype R108-1) infected with the fungal pathogen Phoma medicaginis. Use of a high resolution analyzer with a collision induced dissociation tandem mass spectrometer (CID MS/MS) permitted structural elucidation of target secondary metabolites and four new acylated flavone glycosides have been identified. Changes in the phytoalexin medicarpin and its isoflavone precursors were quantitatively monitored at various time points after fungal spore application. Application of spores induced disease symptoms in the leaves of infected plants and resulted in an increase in the medicarpin precursors formononetin 7-O-glucoside and malonylated formononetin 7-O-glucoside between one and three days post-infection. Relative concentrations of medicarpin were highest five days post-infection. The rapid increase of these molecules was clearly positively correlated to the infection process as certain of them were absent in uninfected leaves, suggesting that the relative rate of their synthesis is tightly related with the infection process.
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Affiliation(s)
- Michał Jasiński
- Institute of Bioorganic Chemistry PAS, Noskowskiego 12/14, 61-704 Poznań, Poland
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Yuksel B, Memon AR. Legume small GTPases and their role in the establishment of symbiotic associations with Rhizobium spp. PLANT SIGNALING & BEHAVIOR 2009; 4:257-60. [PMID: 19794839 PMCID: PMC2664483 DOI: 10.4161/psb.4.4.7868] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2009] [Accepted: 01/16/2009] [Indexed: 05/03/2023]
Abstract
Small GTP-binding genes act as molecular switches regulating myriad of cellular processes including vesicle-mediated intracellular trafficking, signal transduction, cytoskeletal reorganization and cell division in plants and animals. Even though these genes are well conserved both functionally and sequentially across whole Eukaryotae, occasional lineage-specific diversification in some plant species in terms of both functional and expressional characteristics have been reported. Hence, comparative phyletic and correlative functional analyses of legume small GTPases homologs with the genes from other Metazoa and Embryophyta species would be very beneficial for gleaning out the small GTPases that could have specialized in legume-specific processes; e.g., nodulation. The completion of genome sequences of two model legumes, Medicago truncatula and Lotus japonicus will significantly improve our knowledge about mechanism of biological processes taking place in legume-rhizobia symbiotic associations. Besides, the need for molecular switches coordinating busy cargo-trafficking between symbiosis partners would suggest a possible subfunctionalization of small GTPases in Fabaceae for these functions. Therefore, more detailed investigation into the functional characteristics of legume small GTPases would be helpful for the illumination of the events initialized with the perception of bacteria by host, followed by the formation of infection thread and the engulfment of rhizobial bacteria, and end with the senescence of nitrogen-fixing organelles, nodules. In summary, a more thorough functional and evolutionary characterization of small GTPases across the main lineages of Embryophyta is significant for better comprehension of evolutionary history of Plantae, that is because, these genes are associated with multitude of vital biological processes including organogenesis.
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Affiliation(s)
- Bayram Yuksel
- The Scientific and Technological Research Council of Turkey (TUBITAK), Marmara Research Center, Genetic Engineering and Biotechnology Institute, Plant Molecular Biology Laboratory, Gebze, Kocaeli, Turkey.
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Characterization of a Mesorhizobium loti alpha-type carbonic anhydrase and its role in symbiotic nitrogen fixation. J Bacteriol 2009; 191:2593-600. [PMID: 19218391 DOI: 10.1128/jb.01456-08] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Carbonic anhydrase (CA) (EC 4.2.1.1) is a widespread enzyme catalyzing the reversible hydration of CO(2) to bicarbonate, a reaction that participates in many biochemical and physiological processes. Mesorhizobium loti, the microsymbiont of the model legume Lotus japonicus, possesses on the symbiosis island a gene (msi040) encoding an alpha-type CA homologue, annotated as CAA1. In the present work, the CAA1 open reading frame from M. loti strain R7A was cloned, expressed, and biochemically characterized, and it was proven to be an active alpha-CA. The biochemical and physiological roles of the CAA1 gene in free-living and symbiotic rhizobia were examined by using an M. loti R7A disruption mutant strain. Our analysis revealed that CAA1 is expressed in both nitrogen-fixing bacteroids and free-living bacteria during growth in batch cultures, where gene expression was induced by increased medium pH. L. japonicus plants inoculated with the CAA1 mutant strain showed no differences in top-plant traits and nutritional status but consistently formed a higher number of nodules exhibiting higher fresh weight, N content, nitrogenase activity, and delta(13)C abundance. Based on these results, we propose that although CAA1 is not essential for nodule development and symbiotic nitrogen fixation, it may participate in an auxiliary mechanism that buffers the bacteroid periplasm, creating an environment favorable for NH(3) protonation, thus facilitating its diffusion and transport to the plant. In addition, changes in the nodule delta(13)C abundance suggest the recycling of at least part of the HCO(3)(-) produced by CAA1.
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Délano-Frier JP, Tejeda-Sartorius M. Unraveling the network: Novel developments in the understanding of signaling and nutrient exchange mechanisms in the arbuscular mycorrhizal symbiosis. PLANT SIGNALING & BEHAVIOR 2008; 3:936-44. [PMID: 19513196 PMCID: PMC2633739 DOI: 10.4161/psb.6789] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2008] [Accepted: 08/15/2008] [Indexed: 05/20/2023]
Abstract
The arbuscular mycorrhhiza (AM) symbiosis involves an intricate network of signaling and biochemical pathways designed to ensure that a beneficial relationship is established between the plant and fungal partners as a result of a mutual nutrient exchange. Emerging data has been recently published to explain why the relationship is not always fair, as observed in prevalent parasitic AM relationships in which the plant host receives no phosphorus (P) in exchange for carbon (C) delivered to the fungus. The theory behind this unorthodox view of the AM relationship, together with the description of other recent developments in nutrient mobilization as well as in key aspects of the bi-directional signaling that culminates in the symbiotic association, is the subject of this review.
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Affiliation(s)
- John Paul Délano-Frier
- Unidad de Biotecnología e Ingeniería Genética de Plantas; Cinvestav-Campus Guanajuato; Irapuato, Guanajuato México
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Long HH, Schmidt DD, Baldwin IT. Native bacterial endophytes promote host growth in a species-specific manner; phytohormone manipulations do not result in common growth responses. PLoS One 2008; 3:e2702. [PMID: 18628963 PMCID: PMC2444036 DOI: 10.1371/journal.pone.0002702] [Citation(s) in RCA: 115] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2008] [Accepted: 06/19/2008] [Indexed: 11/18/2022] Open
Abstract
BACKGROUND All plants in nature harbor a diverse community of endophytic bacteria which can positively affect host plant growth. Changes in plant growth frequently reflect alterations in phytohormone homoeostasis by plant-growth-promoting (PGP) rhizobacteria which can decrease ethylene (ET) levels enzymatically by 1-aminocyclopropane-1-carboxylate (ACC) deaminase or produce indole acetic acid (IAA). Whether these common PGP mechanisms work similarly for different plant species has not been rigorously tested. METHODOLOGY/PRINCIPAL FINDINGS We isolated bacterial endophytes from field-grown Solanum nigrum; characterized PGP traits (ACC deaminase activity, IAA production, phosphate solubilization and seedling colonization); and determined their effects on their host, S. nigrum, as well as on another Solanaceous native plant, Nicotiana attenuata. In S. nigrum, a majority of isolates that promoted root growth were associated with ACC deaminase activity and IAA production. However, in N. attenuata, IAA but not ACC deaminase activity was associated with root growth. Inoculating N. attenuata and S. nigrum with known PGP bacteria from a culture collection (DSMZ) reinforced the conclusion that the PGP effects are not highly conserved. CONCLUSIONS/SIGNIFICANCE We conclude that natural endophytic bacteria with PGP traits do not have general and predictable effects on the growth and fitness of all host plants, although the underlying mechanisms are conserved.
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Affiliation(s)
- Hoang Hoa Long
- Max Planck Institute for Chemical Ecology, Jena, Germany
| | | | - Ian T. Baldwin
- Max Planck Institute for Chemical Ecology, Jena, Germany
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Mohamed NM, Cicirelli EM, Kan J, Chen F, Fuqua C, Hill RT. Diversity and quorum-sensing signal production of Proteobacteria associated with marine sponges. Environ Microbiol 2008; 10:75-86. [PMID: 18211268 DOI: 10.1111/j.1462-2920.2007.01431.x] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Marine sponges are hosts to diverse and dense bacterial communities and thus provide a potential environment for quorum sensing. Quorum sensing, a key factor in cell-cell communication and bacterial colonization of higher animals, might be involved in the symbiotic interactions between bacteria and their sponge hosts. Given that marine Proteobacteria are known to produce N-acyl homoserine lactone (AHL) signal molecules, we tested the production of AHLs by Alpha- and Gammaproteobacteria isolated from marine sponges Mycale laxissima and Ircinia strobilina and the surrounding water column. We used three different AHL biodetection systems in diffusion assays: Chromobacterium violaceum, Agrobacterium tumefaciens and Sinorhizobium meliloti with optimal sensitivity to short-chain (C4-C6), moderate-chain (C8-C12) and long-chain (>or= C14) AHLs respectively. Thirteen of 23 isolates from M. laxissima and five of 25 isolates from I. strobilina were found to produce AHLs. Signals were detected from two of eight proteobacterial strains from the water column. Thin-layer chromatographic assays based on the A. tumefaciens reporter system were utilized to determine the AHL profiles of the positive isolates. The types and amounts of AHLs synthesized varied considerably among the strains. Small ribosomal rRNA gene sequencing revealed that the AHL-producing alphaproteobacterial isolates were mainly from the Silicibacter-Ruegeria subgroup of the Roseobacter clade. Two-dimensional gel electrophoresis (2DGE)-based proteomic analyses were congruent with phylogenetic relationships but provided higher resolution to differentiate these closely related AHL-producing strains.
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Affiliation(s)
- Naglaa M Mohamed
- Center of Marine Biotechnology, University of Maryland Biotechnology Institute, Baltimore, MD 21202, USA
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Ferrarini A, De Stefano M, Baudouin E, Pucciariello C, Polverari A, Puppo A, Delledonne M. Expression of Medicago truncatula genes responsive to nitric oxide in pathogenic and symbiotic conditions. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2008; 21:781-90. [PMID: 18624641 DOI: 10.1094/mpmi-21-6-0781] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Nitric oxide (NO) is involved in diverse physiological processes in plants, including growth, development, response to pathogens, and interactions with beneficial microorganisms. In this work, a dedicated microarray representing the widest database available of NO-related transcripts in plants has been produced with 999 genes identified by a cDNA amplified fragment length polymorphism analysis as modulated in Medicago truncatula roots treated with two NO donors. The microarray then was used to monitor the expression of NO-responsive genes in M. truncatula during the incompatible interaction with the foliar pathogen Colletotrichum trifolii race 1 and during the symbiotic interaction with Sinorhizobium meliloti 1,021. A wide modulation of NO-related genes has been detected during the hypersensitive reaction or during nodule formation and is discussed with special emphasis on the physiological relevance of these genes in the context of the two biotic interactions. This work clearly shows that NO-responsive genes behave differently depending on the plant organ and on the type of interaction, strengthening the need to consider regulatory networks, including different signaling molecules.
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Affiliation(s)
- Alberto Ferrarini
- Dipartimento Scientifico e Tecnologico, Università degli Studi di Verona, 37134 Verona, Italy
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Teillet A, Garcia J, de Billy F, Gherardi M, Huguet T, Barker DG, de Carvalho-Niebel F, Journet EP. api, A novel Medicago truncatula symbiotic mutant impaired in nodule primordium invasion. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2008; 21:535-46. [PMID: 18393613 DOI: 10.1094/mpmi-21-5-0535] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Genetic approaches have proved to be extremely useful in dissecting the complex nitrogen-fixing Rhizobium-legume endosymbiotic association. Here we describe a novel Medicago truncatula mutant called api, whose primary phenotype is the blockage of rhizobial infection just prior to nodule primordium invasion, leading to the formation of large infection pockets within the cortex of noninvaded root outgrowths. The mutant api originally was identified as a double symbiotic mutant associated with a new allele (nip-3) of the NIP/LATD gene, following the screening of an ethylmethane sulphonate-mutagenized population. Detailed characterization of the segregating single api mutant showed that rhizobial infection is also defective at the earlier stage of infection thread (IT) initiation in root hairs, as well as later during IT growth in the small percentage of nodules which overcome the primordium invasion block. Neither modulating ethylene biosynthesis (with L-alpha-(2-aminoethoxyvinylglycine or 1-aminocyclopropane-1-carboxylic acid) nor reducing ethylene sensitivity in a skl genetic background alters the basic api phenotype, suggesting that API function is not closely linked to ethylene metabolism or signaling. Genetic mapping places the API gene on the upper arm of the M. truncatula linkage group 4, and epistasis analyses show that API functions downstream of BIT1/ERN1 and LIN and upstream of NIP/LATD and the DNF genes.
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Affiliation(s)
- Alice Teillet
- Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR CNRS-INRA 2594/441, F-31320 Castanet-Tolosan, France
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Navazio L, Mariani P. Calcium opens the dialogue between plants and arbuscular mycorrhizal fungi. PLANT SIGNALING & BEHAVIOR 2008; 3:229-30. [PMID: 19704636 PMCID: PMC2634184 DOI: 10.4161/psb.3.4.5093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2007] [Accepted: 09/27/2007] [Indexed: 05/14/2023]
Abstract
Calcium ion is considered a ubiquitous second messenger in all eukaryotic cells. Analysis of intracellular Ca(2+) concentration dynamics has demonstrated its signalling role in plant cells in response to a wide array of environmental cues. The implication of Ca(2+) in the early steps of the arbuscular mycorrhizal symbiosis has been frequently claimed, mainly by analogy with what firmly demonstrated in the rhizobium-legume symbiosis. We recently documented transient Ca(2+) changes in plant cells challenged with diffusible molecules released by arbuscular mycorrhizal fungi. Ca(2+) measurements by the recombinant aequorin method provided new insights into the molecular communications between plants and these beneficial fungi.
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Affiliation(s)
- Lorella Navazio
- Dipartimento di Biologia; Università di Padova; Padova, Italy
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Meschini EP, Blanco FA, Zanetti ME, Beker MP, Küster H, Pühler A, Aguilar OM. Host genes involved in nodulation preference in common bean (Phaseolus vulgaris)-rhizobium etli symbiosis revealed by suppressive subtractive hybridization. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2008; 21:459-68. [PMID: 18321191 DOI: 10.1094/mpmi-21-4-0459] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Common bean cultivars are nodulated preferentially by Rhizobium etli lineages from the same center of host diversification. Nodulation was found to be earlier and numerous in bean plants inoculated with the cognate strain. We predicted that analysis of transcripts at early stages of the interaction between host and rhizobium would identify plant genes that are most likely to be involved in this preferential nodulation. Therefore, we applied a suppressive subtractive hybridization approach in which cDNA from a Mesoamerican cultivar inoculated with either the more- or less-efficient strain of R. etli was used as the driver and the tester, respectively. Forty-one independent tentative consensus sequences (TCs) were obtained and classified into different functional categories. Of 11 selected TCs, 9 were confirmed by quantitative reverse-transcriptase polymerase chain reaction. Two genes show high homology to previously characterized plant receptors. Two other upregulated genes encode for Rab11, a member of the small GTP-binding protein family, and HAP5, a subunit of the heterotrimeric CCAAT-transcription factor. Interestingly, one of the TCs encodes for an isoflavone reductase, which may lead to earlier Nod factor production by specific strains of rhizobia. The transcript abundance of selected cDNAs also was found to be higher in mature nodules of the more efficient interaction. Small or no differences were observed when an Andean bean cultivar was inoculated with a cognate strain, suggesting involvement of these genes in the strain-specific response. The potential role of these genes in the early preferential symbiotic interaction is discussed.
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Affiliation(s)
- Eitel Peltzer Meschini
- Instituto de Biotecnología y Biología Molecular, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, 1900-La Plata, Argentina
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Osborne B, Bergman B. Why Does Gunnera Do It and Other Angiosperms Don't? An Evolutionary Perspective on the Gunnera–Nostoc Symbiosis. ACTA ACUST UNITED AC 2008. [DOI: 10.1007/7171_2007_116] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
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Chen C, Gao M, Liu J, Zhu H. Fungal symbiosis in rice requires an ortholog of a legume common symbiosis gene encoding a Ca2+/calmodulin-dependent protein kinase. PLANT PHYSIOLOGY 2007; 145:1619-28. [PMID: 17965173 PMCID: PMC2151686 DOI: 10.1104/pp.107.109876] [Citation(s) in RCA: 76] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2007] [Accepted: 10/23/2007] [Indexed: 05/18/2023]
Abstract
In natural ecosystems, many plants are able to establish mutually beneficial symbioses with microorganisms. Of critical importance to sustainable agriculture are the symbioses formed between more than 80% of terrestrial plants and arbuscular mycorrhizal (AM) fungi and between legumes and nitrogen-fixing rhizobial bacteria. Interestingly, the two symbioses share overlapping signaling pathways in legumes, suggesting that the evolutionarily recent root nodule symbiosis may have acquired functions from the ancient AM symbiosis. The Medicago truncatula DMI3 (DOESN'T MAKE INFECTIONS3) gene (MtDMI3) and its orthologs in legumes are required for both bacterial and fungal symbioses. MtDMI3 encodes a Ca(2+)/calmodulin-dependent protein kinase (CCaMK) essential for the transduction of the Ca(2+) signal induced by the perception of Nod factors. Putative orthologs of MtDMI3 are also present in non-legumes, but their function in AM symbiosis has not been demonstrated in any non-legume species. Here, we combine reverse genetic approaches and a cross-species complementation test to characterize the function of the rice (Oryza sativa) ortholog of MtDMI3, namely, OsDMI3, in AM symbiosis. We demonstrate that OsDMI3 is not only required for AM symbiosis in rice but also is able to complement a M. truncatula dmi3 mutant, indicating an equivalent role of MtDMI3 orthologs in non-legumes.
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Affiliation(s)
- Caiyan Chen
- Department of Plant and Soil Sciences, University of Kentucky, Lexington, Kentucky 40546, USA
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Ludidi NN, Pellny TK, Kiddle G, Dutilleul C, Groten K, VAN Heerden PDR, Dutt S, Powers SJ, Römer P, Foyer CH. Genetic variation in pea (Pisum sativum L.) demonstrates the importance of root but not shoot C/N ratios in the control of plant morphology and reveals a unique relationship between shoot length and nodulation intensity. PLANT, CELL & ENVIRONMENT 2007; 30:1256-68. [PMID: 17727416 DOI: 10.1111/j.1365-3040.2007.01699.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
Nodule numbers are regulated through systemic auto-regulatory signals produced by shoots and roots. The relative effects of shoot and root genotype on nodule numbers together with relationships to organ biomass, carbon (C) and nitrogen (N) status, and related parameters were measured in pea (Pisum sativum) exploiting natural genetic variation in maturity and apparent nodulation intensity. Reciprocal grafting experiments between the early (Athos), intermediate (Phönix) and late (S00182) maturity phenotypes were performed and Pearson's correlation coefficients for the parameters were calculated. No significant correlations were found between shoot C/N ratios and plant morphology parameters, but the root C/N ratio showed a strong correlation with root fresh and dry weights as well as with shoot fresh weight with less significant interactions with leaf number. Hence, the root C/N ratio rather than shoot C/N had a predominant influence on plant morphology when pea plants are grown under conditions of symbiotic nitrogen supply. The only phenotypic characteristic that showed a statistically significant correlation with nodulation intensity was shoot length, which accounted for 68.5% of the variation. A strong linear relationship was demonstrated between shoot length and nodule numbers. Hence, pea nodule numbers are controlled by factors related to shoot extension, but not by shoot or root biomass accumulation, total C or total N. The relationship between shoot length and nodule numbers persisted under field conditions. These results suggest that stem height could be used as a breeding marker for the selection of pea cultivars with high nodule numbers and high seed N contents.
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Affiliation(s)
- Ndiko N Ludidi
- Crop Performance and Improvement Division, Rothamsted Research, Harpenden, Herts AL5 2JQ, UK
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Estrada-Navarrete G, Alvarado-Affantranger X, Olivares JE, Guillén G, Díaz-Camino C, Campos F, Quinto C, Gresshoff PM, Sanchez F. Fast, efficient and reproducible genetic transformation of Phaseolus spp. by Agrobacterium rhizogenes. Nat Protoc 2007; 2:1819-24. [PMID: 17641650 DOI: 10.1038/nprot.2007.259] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
This transformation procedure generates, with high efficiency (70-90%), hairy roots in cultivars, landraces and accessions of Phaseolus vulgaris (common bean) and other Phaseolus spp. Hairy roots rapidly develop after wounding young plantlets with Agrobacterium rhizogenes, at the cotyledon node, and keeping the plants in high-humidity conditions. Callogenesis always precedes hairy-root formation, and after 15 days, when roots develop at wounded sites, the stem with the normal root is cleaved below the hairy root zone. Transgenic roots and nodules co-transformed with a binary vector can be easily identified using a reporter gene. This procedure, in addition to inducing robust transgenic hairy roots that are susceptible to being nodulated by rhizobia and to fixing nitrogen efficiently, sets the foundation for a high-throughput functional genomics approach on the study of root biology and root-microbe interactions. This protocol can be completed within 30 days.
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Affiliation(s)
- Georgina Estrada-Navarrete
- Departamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Av. Universidad 2001, Colonia Chamilpa, CP 62210, Cuernavaca, Morelos, México
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Andriankaja A, Boisson-Dernier A, Frances L, Sauviac L, Jauneau A, Barker DG, de Carvalho-Niebel F. AP2-ERF transcription factors mediate Nod factor dependent Mt ENOD11 activation in root hairs via a novel cis-regulatory motif. THE PLANT CELL 2007; 19:2866-85. [PMID: 17827349 PMCID: PMC2048698 DOI: 10.1105/tpc.107.052944] [Citation(s) in RCA: 84] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2007] [Revised: 07/26/2007] [Accepted: 08/14/2007] [Indexed: 05/17/2023]
Abstract
Rhizobium Nod factors (NFs) are specific lipochitooligosaccharides that activate host legume signaling pathways essential for initiating the nitrogen-fixing symbiotic association. This study describes the characterization of cis-regulatory elements and trans-interacting factors that regulate NF-dependent and epidermis-specific gene transcription in Medicago truncatula. Detailed analysis of the Mt ENOD11 promoter using deletion, mutation, and gain-of-function constructs has led to the identification of an NF-responsive regulatory unit (the NF box) sufficient to direct NF-elicited expression in root hairs. NF box-mediated expression requires a major GCC-like motif, which is also essential for the binding of root hair-specific nuclear factors. Yeast one-hybrid screening has identified three closely related AP2/ERF transcription factors (ERN1 to ERN3) that are able to bind specifically to the NF box. ERN1 is identical to an ERF-like factor identified recently. Expression analysis has revealed that ERN1 and ERN2 genes are upregulated in root hairs following NF treatment and that this activation requires a functional NFP gene. Transient expression assays in Nicotiana benthamiana have further shown that nucleus-targeted ERN1 and ERN2 factors activate NF box-containing reporters, whereas ERN3 represses ERN1/ERN2-dependent transcription activation. A model is proposed for the fine-tuning of NF-elicited gene transcription in root hairs involving the interplay between repressor and activator ERN factors.
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Affiliation(s)
- Andry Andriankaja
- Laboratory of Plant Microbe Interactions, Centre National de la Recherche Scientifique-Institut National de la Recherche Agronomique, BP 52627, Castanet-Tolosan Cedex, France
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Radutoiu S, Madsen LH, Madsen EB, Jurkiewicz A, Fukai E, Quistgaard EMH, Albrektsen AS, James EK, Thirup S, Stougaard J. LysM domains mediate lipochitin-oligosaccharide recognition and Nfr genes extend the symbiotic host range. EMBO J 2007; 26:3923-35. [PMID: 17690687 PMCID: PMC1994126 DOI: 10.1038/sj.emboj.7601826] [Citation(s) in RCA: 240] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2007] [Accepted: 07/18/2007] [Indexed: 11/08/2022] Open
Abstract
Legume-Rhizobium symbiosis is an example of selective cell recognition controlled by host/non-host determinants. Individual bacterial strains have a distinct host range enabling nodulation of a limited set of legume species and vice versa. We show here that expression of Lotus japonicus Nfr1 and Nfr5 Nod-factor receptor genes in Medicago truncatula and L. filicaulis, extends their host range to include bacterial strains, Mesorhizobium loti or DZL, normally infecting L. japonicus. As a result, the symbiotic program is induced, nodules develop and infection threads are formed. Using L. japonicus mutants and domain swaps between L. japonicus and L. filicaulis NFR1 and NFR5, we further demonstrate that LysM domains of the NFR1 and NFR5 receptors mediate perception of the bacterial Nod-factor signal and that recognition depends on the structure of the lipochitin-oligosaccharide Nod-factor. We show that a single amino-acid variation in the LysM2 domain of NFR5 changes recognition of the Nod-factor synthesized by the DZL strain and suggests a possible binding site for bacterial lipochitin-oligosaccharide signal molecules.
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Affiliation(s)
- Simona Radutoiu
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Aarhus, Denmark
| | - Lene H Madsen
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Aarhus, Denmark
| | - Esben B Madsen
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Aarhus, Denmark
| | - Anna Jurkiewicz
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Aarhus, Denmark
| | - Eigo Fukai
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Aarhus, Denmark
| | - Esben M H Quistgaard
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Aarhus, Denmark
| | - Anita S Albrektsen
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Aarhus, Denmark
| | - Euan K James
- School of Life Sciences, University of Dundee, Dundee, UK
| | - Søren Thirup
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Aarhus, Denmark
| | - Jens Stougaard
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Aarhus, Denmark
- Laboratory of Gene Expression, Department of Molecular Biology, University of Aarhus, Gustav Wieds Vej 10, 8000 Aarhus C, Denmark. Tel.: +45 89 42 50 11; Fax: +45 86 20 12 22; E-mail:
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Siciliano V, Genre A, Balestrini R, Cappellazzo G, deWit PJGM, Bonfante P. Transcriptome analysis of arbuscular mycorrhizal roots during development of the prepenetration apparatus. PLANT PHYSIOLOGY 2007. [PMID: 18287488 DOI: 10.1104/pp.107] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Information on changes in the plant transcriptome during early interaction with arbuscular mycorrhizal (AM) fungi is still limited since infections are usually not synchronized and plant markers for early stages of colonization are not yet available. A prepenetration apparatus (PPA), organized in epidermal cells during appressorium development, has been reported to be responsible for assembling a trans-cellular tunnel to accommodate the invading fungus. Here, we used PPAs as markers for cell responsiveness to fungal contact to investigate gene expression at this early stage of infection with minimal transcript dilution. PPAs were identified by confocal microscopy in transformed roots of Medicago truncatula expressing green fluorescent protein-HDEL, colonized by the AM fungus Gigaspora margarita. A PPA-targeted suppressive-subtractive cDNA library was built, the cDNAs were cloned and sequenced, and, consequently, 107 putative interaction-specific genes were identified. The expression of a subset of 15 genes, selected by reverse northern dot blot screening, and five additional genes, potentially involved in PPA formation, was analyzed by real-time reverse transcription-polymerase chain reaction and compared with an infection stage, 48 h after the onset of the PPA. Comparison of the expression profile of G. margarita-inoculated wild type and the mycorrhiza-defective dmi3-1 mutant of M. truncatula revealed that an expansin-like gene, expressed in wild-type epidermis during PPA development, can be regarded as an early host marker for successful mycorrhization. A putative Avr9/Cf-9 rapidly elicited gene, found to be up-regulated in the mutant, suggests novel regulatory roles for the DMI3 protein in the early mycorrhization process.
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Affiliation(s)
- Valeria Siciliano
- Dipartimento di Biologia Vegetale, Università di Torino and Istituto Protezione Piante-CNR, Torino, Italy
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40
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Siciliano V, Genre A, Balestrini R, Cappellazzo G, deWit PJGM, Bonfante P. Transcriptome analysis of arbuscular mycorrhizal roots during development of the prepenetration apparatus. PLANT PHYSIOLOGY 2007; 144:1455-66. [PMID: 17468219 PMCID: PMC1914140 DOI: 10.1104/pp.107.097980] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2007] [Accepted: 04/13/2007] [Indexed: 05/15/2023]
Abstract
Information on changes in the plant transcriptome during early interaction with arbuscular mycorrhizal (AM) fungi is still limited since infections are usually not synchronized and plant markers for early stages of colonization are not yet available. A prepenetration apparatus (PPA), organized in epidermal cells during appressorium development, has been reported to be responsible for assembling a trans-cellular tunnel to accommodate the invading fungus. Here, we used PPAs as markers for cell responsiveness to fungal contact to investigate gene expression at this early stage of infection with minimal transcript dilution. PPAs were identified by confocal microscopy in transformed roots of Medicago truncatula expressing green fluorescent protein-HDEL, colonized by the AM fungus Gigaspora margarita. A PPA-targeted suppressive-subtractive cDNA library was built, the cDNAs were cloned and sequenced, and, consequently, 107 putative interaction-specific genes were identified. The expression of a subset of 15 genes, selected by reverse northern dot blot screening, and five additional genes, potentially involved in PPA formation, was analyzed by real-time reverse transcription-polymerase chain reaction and compared with an infection stage, 48 h after the onset of the PPA. Comparison of the expression profile of G. margarita-inoculated wild type and the mycorrhiza-defective dmi3-1 mutant of M. truncatula revealed that an expansin-like gene, expressed in wild-type epidermis during PPA development, can be regarded as an early host marker for successful mycorrhization. A putative Avr9/Cf-9 rapidly elicited gene, found to be up-regulated in the mutant, suggests novel regulatory roles for the DMI3 protein in the early mycorrhization process.
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Affiliation(s)
- Valeria Siciliano
- Dipartimento di Biologia Vegetale, Università di Torino and Istituto Protezione Piante-CNR, Torino, Italy
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Larkan NJ, Smith SE, Barker SJ. Position of the reduced mycorrhizal colonisation (Rmc) locus on the tomato genome map. MYCORRHIZA 2007; 17:311-318. [PMID: 17285306 DOI: 10.1007/s00572-007-0106-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2006] [Accepted: 12/20/2006] [Indexed: 05/13/2023]
Abstract
Our research aims to investigate the molecular communication between land plants and arbuscular mycorrhizal (AM) fungi in the establishment of symbiosis. We have identified a mutation in the facultative AM host tomato, which we named rmc. Plants that are homozygous for rmc no longer host most AM fungi. The mutation also affects the interaction of tomato with root knot nematode and Fusarium wilt. However, the function/s encoded by the intact Rmc locus is/are unknown. To clone and sequence the gene or genes that comprise the Rmc locus, we have initiated a positional cloning project. In this paper, we report the construction of mapping populations and use of molecular markers from the published genome map to identify the location of Rmc on tomato chromosome 8. Nucleotide binding site-leucine rich repeat resistance genes, reported to reside in the same region of that chromosome, provided insufficient differences to develop cleaved amplified polymorphic sequence markers. Therefore, we were unable to map these sequences in relation to rmc. Our results potentiate future work to identify the Rmc function and to determine the genetic basis for the multiple plant-microbe interaction functions that the rmc mutation has defined.
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Affiliation(s)
- Nicholas J Larkan
- School of Plant Biology M084, Centre for Soil-Plant Interactions, The University of Western Australia, 35 Stirling Highway, Crawley, WA, 6009, Australia
- Centre for Soil-Plant Interactions, Perth, Australia
- Agriculture and Agri-Food Canada, 107 Science Place, Saskatoon, Saskatchewan, S7N0X2, Canada
| | - Sally E Smith
- Soil and Land Systems, School of Earth and Environmental Sciences, The University of Adelaide, Adelaide, SA, 5005, Australia
- Centre for Soil-Plant Interactions, Perth, Australia
| | - Susan J Barker
- School of Plant Biology M084, Centre for Soil-Plant Interactions, The University of Western Australia, 35 Stirling Highway, Crawley, WA, 6009, Australia.
- Centre for Soil-Plant Interactions, Perth, Australia.
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Tesfaye M, Liu J, Allan DL, Vance CP. Genomic and genetic control of phosphate stress in legumes. PLANT PHYSIOLOGY 2007; 144:594-603. [PMID: 17556523 PMCID: PMC1914184 DOI: 10.1104/pp.107.097386] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2007] [Accepted: 04/10/2007] [Indexed: 05/15/2023]
Affiliation(s)
- Mesfin Tesfaye
- United States Department of Agriculture Agricultural Research Service , University of Minnesota, St. Paul, Minnesota 55108, USA
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Navazio L, Moscatiello R, Genre A, Novero M, Baldan B, Bonfante P, Mariani P. A diffusible signal from arbuscular mycorrhizal fungi elicits a transient cytosolic calcium elevation in host plant cells. PLANT PHYSIOLOGY 2007; 144:673-81. [PMID: 17142489 PMCID: PMC1914206 DOI: 10.1104/pp.106.086959] [Citation(s) in RCA: 91] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2006] [Accepted: 11/21/2006] [Indexed: 05/12/2023]
Abstract
The implication of calcium as intracellular messenger in the arbuscular mycorrhizal (AM) symbiosis has not yet been directly demonstrated, although often envisaged. We used soybean (Glycine max) cell cultures stably expressing the bioluminescent Ca(2+) indicator aequorin to detect intracellular Ca(2+) changes in response to the culture medium of spores of Gigaspora margarita germinating in the absence of the plant partner. Rapid and transient elevations in cytosolic free Ca(2+) were recorded, indicating that diffusible molecules released by the mycorrhizal fungus are perceived by host plant cells through a Ca(2+)-mediated signaling. Similar responses were also triggered by two Glomus isolates. The fungal molecules active in generating the Ca(2+) transient were constitutively released in the medium, and the induced Ca(2+) signature was not modified by the coculture of germinating spores with plant cells. Even ungerminated spores were able to generate the signaling molecules, as proven when the germination was blocked by a low temperature. The fungal molecules were found to be stable to heat treatment, of small molecular mass (<3 kD), and, on the basis of extraction with an organic solvent, partially lipophilic. Evidence for the specificity of such an early fungal signal to the AM symbiosis is suggested by the lack of a Ca(2+) response in cultured cells of the nonhost plant Arabidopsis (Arabidopsis thaliana) and by the up-regulation in soybean cells of genes related to Medicago truncatula DMI1, DMI2, and DMI3 and considered essential for the establishment of the AM symbiosis.
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Affiliation(s)
- Lorella Navazio
- Dipartimento di Biologia, Università di Padova, 35131 Padova, Italy.
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Cooper J. Early interactions between legumes and rhizobia: disclosing complexity in a molecular dialogue. J Appl Microbiol 2007; 103:1355-65. [DOI: 10.1111/j.1365-2672.2007.03366.x] [Citation(s) in RCA: 245] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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45
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Shahollari B, Vadassery J, Varma A, Oelmüller R. A leucine-rich repeat protein is required for growth promotion and enhanced seed production mediated by the endophytic fungus Piriformospora indica in Arabidopsis thaliana. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2007; 50:1-13. [PMID: 17397506 DOI: 10.1111/j.1365-313x.2007.03028.x] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Piriformospora indica, a basidiomycete of the Sebacinaceae family, promotes the growth, development and seed production of a variety of plant species. Arabidopsis plants colonized with the fungus produce 22% more seeds than uncolonized plants. Deactivating the Arabidopsis single-copy gene DMI-1, which encodes an ion carrier required for mycorrihiza formation in legumes, does not affect the beneficial interaction between the two symbiotic partners. We used cellular and molecular responses initiated during the establishment of the interaction between P. indica and Arabidopsis roots to isolate mutants that fail to respond to the fungus. An ethylmethane sulfonate mutant (Piriformospora indica-insensitive-2; pii-2), and a corresponding insertion line, are impaired in a leucine-rich repeat protein (At1g13230). The protein pii-2, which contains a putative endoplasmic reticulum retention signal, is also found in Triton X-100-insoluble plasma membrane microdomains, suggesting that it is present in the endoplasmic reticulum/plasma membrane continuum in Arabidopsis roots. The microdomains also contain an atypical receptor protein (At5g16590) containing leucine-rich repeats, the message of which is transiently upregulated in Arabidopsis roots in response to P. indica. This response is not detectable in At1g13230 mutants, and the protein is not detectable in the At1g13230 mutant microdomains. Partial deactivation of a gene for a sphingosine kinase, which is required for the biosynthesis of sphingolipid found in plasma membrane microdomains, also affects the Arabidopsis/P. indica interaction. Thus, pii-2, and presumably also At5g16590, two proteins present in plasma membrane microdomains, appear to be involved in P. indica-induced growth promotion and enhanced seed production in Arabidopsis thaliana.
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Affiliation(s)
- Bationa Shahollari
- Friedrich-Schiller-Universität Jena, Institut für Allgemeine Botanik and Pflanzenphysiologie, Dornburger Str. 159, 07743 Jena, Germany
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Vailleau F, Sartorel E, Jardinaud MF, Chardon F, Genin S, Huguet T, Gentzbittel L, Petitprez M. Characterization of the interaction between the bacterial wilt pathogen Ralstonia solanacearum and the model legume plant Medicago truncatula. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2007; 20:159-67. [PMID: 17313167 DOI: 10.1094/mpmi-20-2-0159] [Citation(s) in RCA: 76] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
The soilborne pathogen Ralstonia solanacearum is the causal agent of bacterial wilt and attacks more than 200 plant species, including some legumes and the model legume plant Medicago truncatula. We have demonstrated that M. truncatula accessions Jemalong A17 and F83005.5 are susceptible to R. solanacearum and, by screening 28 R. solanacearum strains on the two M. truncatula lines, differential interactions were identified. R. solanacearum GMI1000 infected Jemalong A17 line, and disease symptoms were dependent upon functional hrp genes. An in vitro root inoculation method was employed to demonstrate that R. solanacearum colonized M. truncatula via the xylem and intercellular spaces. R. solanacearum multiplication was restricted by a factor greater than 1 x 10(5) in the resistant line F83005.5 compared with susceptible Jemalong A17. Genetic analysis of recombinant inbred lines from a cross between Jemalong A17 and F83005.5 revealed the presence of major quantitative trait loci for bacterial wilt resistance located on chromosome 5. The results indicate that the root pathosystem for M. truncatula will provide useful traits for molecular analyses of disease and resistance in this model plant species.
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Affiliation(s)
- Fabienne Vailleau
- INP-ENSAT, Laboratoire de Biotechnologie et Amélioration des Plantes, BP32607, 31326 Castanet-Tolosan cedex, France.
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47
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Estrada-Navarrete G, Alvarado-Affantranger X, Olivares JE, Díaz-Camino C, Santana O, Murillo E, Guillén G, Sánchez-Guevara N, Acosta J, Quinto C, Li D, Gresshoff PM, Sánchez F. Agrobacterium rhizogenes transformation of the Phaseolus spp.: a tool for functional genomics. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2006; 19:1385-93. [PMID: 17153923 DOI: 10.1094/mpmi-19-1385] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
A fast, reproducible, and efficient transformation procedure employing Agrobacterium rhizogenes was developed for Phaseolus vulgaris L. wild accessions, landraces, and cultivars and for three other species belonging to the genus Phaseolus: P. coccineus, P. lunatus, and P. acutifolius. Induced hairy roots are robust and grow quickly. The transformation frequency is between 75 and 90% based on the 35-S promoter-driven green fluorescent protein and beta-glucuronidase expression reporter constructs. When inoculated with Rhizobium tropici, transgenic roots induce normal determinate nodules that fix nitrogen as efficiently as inoculated standard roots. The A. rhizogenes-induced hairy root transformation in the genus Phaseolus sets the foundation for functional genomics programs focused on root physiology, root metabolism, and root-microbe interactions.
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Affiliation(s)
- Georgina Estrada-Navarrete
- Departamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Apartado Postal 510-3, Cuernavaca, Morelos 62271, México
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48
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Murray JD, Karas BJ, Sato S, Tabata S, Amyot L, Szczyglowski K. A cytokinin perception mutant colonized by Rhizobium in the absence of nodule organogenesis. Science 2006; 315:101-4. [PMID: 17110535 DOI: 10.1126/science.1132514] [Citation(s) in RCA: 291] [Impact Index Per Article: 16.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
In legumes, Nod-factor signaling by rhizobia initiates the development of the nitrogen-fixing nodule symbiosis, but the direct cell division stimulus that brings about nodule primordia inception in the root cortex remains obscure. We showed that Lotus japonicus plants homozygous for a mutation in the HYPERINFECTED 1 (HIT1) locus exhibit abundant infection-thread formation but fail to initiate timely cortical cell divisions in response to rhizobial signaling. We demonstrated that the corresponding gene encodes a cytokinin receptor that is required for the activation of the nodule inception regulator Nin and nodule organogenesis.
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Affiliation(s)
- Jeremy D Murray
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research Centre, 1391 Sandford Street, London, Ontario N5V 4T3, Canada
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Balestrini R, Lanfranco L. Fungal and plant gene expression in arbuscular mycorrhizal symbiosis. MYCORRHIZA 2006; 16:509-524. [PMID: 17004063 DOI: 10.1007/s00572-006-0069-2] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2006] [Accepted: 07/05/2006] [Indexed: 05/12/2023]
Abstract
Arbuscular mycorrhizas (AMs) are a unique example of symbiosis between two eukaryotes, soil fungi and plants. This association induces important physiological changes in each partner that lead to reciprocal benefits, mainly in nutrient supply. The symbiosis results from modifications in plant and fungal cell organization caused by specific changes in gene expression. Recently, much effort has gone into studying these gene expression patterns to identify a wider spectrum of genes involved. We aim in this review to describe AM symbiosis in terms of current knowledge on plant and fungal gene expression profiles.
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Affiliation(s)
- Raffaella Balestrini
- Istituto per la Protezione delle Piante-Sezione di Torino-CNR, Viale Mattioli 25, 10125, Turin, Italy.
| | - Luisa Lanfranco
- Dipartimento di Biologia Vegetale, Università di Torino, Viale Mattioli 25, 10125, Turin, Italy
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Murray J, Karas B, Ross L, Brachmann A, Wagg C, Geil R, Perry J, Nowakowski K, MacGillivary M, Held M, Stougaard J, Peterson L, Parniske M, Szczyglowski K. Genetic suppressors of the Lotus japonicus har1-1 hypernodulation phenotype. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2006; 19:1082-91. [PMID: 17022172 DOI: 10.1094/mpmi-19-1082] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Lotus japonicus har1 mutants respond to inoculation with Mesorhizobium loti by forming an excessive number of nodules due to genetic lesions in the HAR1 autoregulatory receptor kinase gene. In order to expand the repertoire of mutants available for the genetic dissection of the root nodule symbiosis (RNS), a screen for suppressors of the L. japonicus har1-1 hypernodulation phenotype was performed. Of 150,000 M2 plants analyzed, 61 stable L. japonicus double-mutant lines were isolated. In the context of the har1-1 mutation, 26 mutant lines were unable to form RNS, whereas the remaining 35 mutant lines carried more subtle symbiotic phenotypes, either forming white ineffective nodules or showing reduced nodulation capacity. When challenged with Glomus intraradices, 18 of the 61 suppressor lines were unable to establish a symbiosis with this arbuscular mycorrhiza fungus. Using a combined approach of genetic mapping, targeting induced local lesions in genomics, and sequencing, all non-nodulating mutant lines were characterized and shown to represent new alleles of at least nine independent symbiotic loci. The class of mutants with reduced nodulation capacity was of particular interest because some of them may specify novel plant functions that regulate nodule development in L. japonicus. To facilitate mapping of the latter class of mutants, an introgression line, in which the har1-1 allele was introduced into a polymorphic background of L. japonicus ecotype MG20, was constructed.
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Affiliation(s)
- Jeremy Murray
- Agriculture and Agri-Food Canada, Southern Crop Protection and Food Research Centre, 1391 Sandford Street, London, Ontario N5V 4T3, Canada
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