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Tajbakhsh K, Stanowska O, Neels A, Perren A, Zboray R. 3D Virtual Histopathology by Phase-Contrast X-Ray Micro-CT for Follicular Thyroid Neoplasms. IEEE TRANSACTIONS ON MEDICAL IMAGING 2024; 43:2670-2678. [PMID: 38437150 DOI: 10.1109/tmi.2024.3372602] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/06/2024]
Abstract
Histological analysis is the core of follicular thyroid carcinoma (FTC) classification. The histopathological criteria of capsular and vascular invasion define malignancy and aggressiveness of FTC. Analysis of multiple sections is cumbersome and as only a minute tissue fraction is analyzed during histopathology, under-sampling remains a problem. Application of an efficient tool for complete tissue imaging in 3D would speed-up diagnosis and increase accuracy. We show that X-ray propagation-based imaging (XPBI) of paraffin-embedded tissue blocks is a valuable complementary method for follicular thyroid carcinoma diagnosis and assessment. It enables a fast, non-destructive and accurate 3D virtual histology of the FTC resection specimen. We demonstrate that XPBI virtual slices can reliably evaluate capsular invasions. Then we discuss the accessible morphological information from XPBI and their significance for vascular invasion diagnosis. We show 3D morphological information that allow to discern vascular invasions. The results are validated by comparing XPBI images with clinically accepted histology slides revised by and under supervision of two experienced endocrine pathologists.
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2
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Agrawal AK, Gupta C, Singh B, Kashyap Y, Shukla M. Quantitative phase contrast X-ray tomography of aluminium metal matrix composite. Appl Radiat Isot 2024; 204:111149. [PMID: 38134854 DOI: 10.1016/j.apradiso.2023.111149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2023] [Revised: 12/11/2023] [Accepted: 12/13/2023] [Indexed: 12/24/2023]
Abstract
The quantitative assessment of micro-structure and load-induced damages in Al-SiC metal matrix composites (MMC) is important for its design optimization, performance evaluation and structure-property correlation. X-ray Phase contrast micro-tomography is potentially used for evaluation of its 3 dimensional micro-structure manifested in the form of voids, cracks, embedded particles, and load-induced damages. However, the contrast between Al matrix and SiC particles is insufficient for their clear morphological identification and quantitative assessment. In the present study, we have proposed and applied single image-based phase retrieval as a pre-processing step to micro-tomography reconstruction for improved assessment of micro-structure and cohesion-induced damages in Al-SiC MMC. The advantages of applying different phase retrieval techniques in the enhancement of image quality and morphological quantification of SiC particles, pores and cohesion damages are discussed. It is observed that the Paganin method offers the best improvement in contrast to noise ratio for the measurement of SiC particles embedded in the Al matrix.
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Affiliation(s)
- Ashish K Agrawal
- Technical Physics Division, Bhabha Atomic Research Centre, Mumbai, India; Homi Bhabha National Institute, Mumbai, 400 094, India.
| | - Chiradeep Gupta
- Mechanical Metallurgy Division, Bhabha Atomic Research Centre, Mumbai, India; Homi Bhabha National Institute, Mumbai, 400 094, India
| | - Balwant Singh
- Technical Physics Division, Bhabha Atomic Research Centre, Mumbai, India; Homi Bhabha National Institute, Mumbai, 400 094, India
| | - Yogesh Kashyap
- Technical Physics Division, Bhabha Atomic Research Centre, Mumbai, India; Homi Bhabha National Institute, Mumbai, 400 094, India
| | - Mayank Shukla
- Technical Physics Division, Bhabha Atomic Research Centre, Mumbai, India; Homi Bhabha National Institute, Mumbai, 400 094, India
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3
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Zhao Y, Zheng M, Li Y, Han S, Li F, Qi B, Liu D, Hu C. Suppressing multi-material and streak artifacts with an accelerated 3D iterative image reconstruction algorithm for in-line X-ray phase-contrast computed tomography. OPTICS EXPRESS 2022; 30:19684-19704. [PMID: 36221738 DOI: 10.1364/oe.459924] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Accepted: 05/09/2022] [Indexed: 06/16/2023]
Abstract
In-line X-ray phase-contrast computed tomography typically contains two independent procedures: phase retrieval and computed tomography reconstruction, in which multi-material and streak artifacts are two important problems. To address these problems simultaneously, an accelerated 3D iterative image reconstruction algorithm is proposed. It merges the above-mentioned two procedures into one step, and establishes the data fidelity term in raw projection domain while introducing 3D total variation regularization term in image domain. Specifically, a transport-of-intensity equation (TIE)-based phase retrieval method is updated alternately for different areas of the multi-material sample. Simulation and experimental results validate the effectiveness and efficiency of the proposed algorithm.
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4
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Albers J, Svetlove A, Alves J, Kraupner A, di Lillo F, Markus MA, Tromba G, Alves F, Dullin C. Elastic transformation of histological slices allows precise co-registration with microCT data sets for a refined virtual histology approach. Sci Rep 2021; 11:10846. [PMID: 34035350 PMCID: PMC8149420 DOI: 10.1038/s41598-021-89841-w] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Accepted: 04/16/2021] [Indexed: 11/24/2022] Open
Abstract
Although X-ray based 3D virtual histology is an emerging tool for the analysis of biological tissue, it falls short in terms of specificity when compared to conventional histology. Thus, the aim was to establish a novel approach that combines 3D information provided by microCT with high specificity that only (immuno-)histochemistry can offer. For this purpose, we developed a software frontend, which utilises an elastic transformation technique to accurately co-register various histological and immunohistochemical stainings with free propagation phase contrast synchrotron radiation microCT. We demonstrate that the precision of the overlay of both imaging modalities is significantly improved by performing our elastic registration workflow, as evidenced by calculation of the displacement index. To illustrate the need for an elastic co-registration approach we examined specimens from a mouse model of breast cancer with injected metal-based nanoparticles. Using the elastic transformation pipeline, we were able to co-localise the nanoparticles to specifically stained cells or tissue structures into their three-dimensional anatomical context. Additionally, we performed a semi-automated tissue structure and cell classification. This workflow provides new insights on histopathological analysis by combining CT specific three-dimensional information with cell/tissue specific information provided by classical histology.
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Affiliation(s)
- Jonas Albers
- Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Göttingen, Germany.
| | - Angelika Svetlove
- Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Göttingen, Germany.,Translational Molecular Imaging, Max-Planck-Institute for Experimental Medicine, Göttingen, Germany
| | - Justus Alves
- Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Göttingen, Germany
| | | | | | - M Andrea Markus
- Translational Molecular Imaging, Max-Planck-Institute for Experimental Medicine, Göttingen, Germany
| | | | - Frauke Alves
- Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Göttingen, Germany.,Translational Molecular Imaging, Max-Planck-Institute for Experimental Medicine, Göttingen, Germany.,Clinic for Hematology and Medical Oncology, University Medical Center Göttingen, Göttingen, Germany
| | - Christian Dullin
- Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Göttingen, Germany
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5
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Longo E, Sancey L, Cedola A, Barbier EL, Bravin A, Brun F, Bukreeva I, Fratini M, Massimi L, Greving I, Le Duc G, Tillement O, De La Rochefoucauld O, Zeitoun P. 3D Spatial Distribution of Nanoparticles in Mice Brain Metastases by X-ray Phase-Contrast Tomography. Front Oncol 2021; 11:554668. [PMID: 34113554 PMCID: PMC8185349 DOI: 10.3389/fonc.2021.554668] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Accepted: 04/30/2021] [Indexed: 02/01/2023] Open
Abstract
Characterizing nanoparticles (NPs) distribution in multiple and complex metastases is of fundamental relevance for the development of radiological protocols based on NPs administration. In the literature, there have been advances in monitoring NPs in tissues. However, the lack of 3D information is still an issue. X-ray phase-contrast tomography (XPCT) is a 3D label-free, non-invasive and multi-scale approach allowing imaging anatomical details with high spatial and contrast resolutions. Here an XPCT qualitative study on NPs distribution in a mouse brain model of melanoma metastases injected with gadolinium-based NPs for theranostics is presented. For the first time, XPCT images show the NPs uptake at micrometer resolution over the full brain. Our results revealed a heterogeneous distribution of the NPs inside the melanoma metastases, bridging the gap in spatial resolution between magnetic resonance imaging and histology. Our findings demonstrated that XPCT is a reliable technique for NPs detection and can be considered as an emerging method for the study of NPs distribution in organs.
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Affiliation(s)
- Elena Longo
- Helmholtz-Zentrum Hereon, Institute of Materials Physics, Geesthacht, Germany.,Laboratoire d'Optique Appliquée UMR7639, ENSTA-CNRS-Ecole Polytechnique IP Paris, Palaiseau, France
| | - Lucie Sancey
- Institute for Advanced Biosciences U1209 UMR5309 UGA, Allée des Alpes-Site Santé, La Tronche, France
| | | | - Emmanuel L Barbier
- Univ. Grenoble Alpes, Inserm, U1216, Grenoble Institut Neurosciences, GIN, Grenoble, France
| | - Alberto Bravin
- European Synchrotron Radiation Facility, Grenoble, France
| | | | - Inna Bukreeva
- Institute of Nanotechnology-CNR, Rome-Unit, Rome, Italy.,P. N. Lebedev Physical Institute, RAS, Moscow, Russia
| | - Michela Fratini
- Institute of Nanotechnology-CNR, Rome-Unit, Rome, Italy.,IRCCS Santa Lucia Foundation, Rome, Italy
| | - Lorenzo Massimi
- Institute of Nanotechnology-CNR, Rome-Unit, Rome, Italy.,Department of Medical Physics and Biomedical Engineering, University College London, London, United Kingdom
| | - Imke Greving
- Helmholtz-Zentrum Hereon, Institute of Materials Physics, Geesthacht, Germany
| | | | - Olivier Tillement
- Institut lumière-matière, UMR5306, Université Claude Bernard Lyon1-CNRS, Université de Lyon, Villeurbanne, France
| | | | - Philippe Zeitoun
- Laboratoire d'Optique Appliquée UMR7639, ENSTA-CNRS-Ecole Polytechnique IP Paris, Palaiseau, France
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Wagner W, Dullin C, Andreas S, Lizé M. Three-dimensional assessment of bronchiectasis in a mouse model of mucociliary clearance disorder. ERJ Open Res 2021; 7:00635-2020. [PMID: 33816598 PMCID: PMC8005675 DOI: 10.1183/23120541.00635-2020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Accepted: 12/07/2020] [Indexed: 11/17/2022] Open
Abstract
Bronchiectasis is a chronic pathological condition characterised by abnormal enlargement of the lung's conductive airways. It is associated with a lack of ciliary motility and restricted mucociliary clearance in diseases such as primary ciliary dyskinesia (PCD) or “immotile cilia syndrome”. Recent studies have shown an increase in the prevalence of bronchiectasis, causing a significant burden on public healthcare systems [1, 2]. The mechanisms that trigger and drive the development of bronchiectasis have yet to be fully elucidated. Murine models of immotile cilia or reduced mucociliary clearance failed to display signs of bronchiectasis in multiple studies, raising questions about the suitability of murine models for non-cystic fibrosis (CF) bronchiectasis and hindering the development of targeted therapies [3]. Synchrotron-based imaging allows for detection of bronchiectasis-like phenotypes in mice with mucociliary clearance disordershttps://bit.ly/3gXGdP3
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Affiliation(s)
- Willi Wagner
- University of Heidelberg, Dept of Diagnostic and Interventional Radiology, Translational Lung Research Center Heidelberg (TLRC), German Center for Lung Research (DZL), Heidelberg, Germany.,University Medical Center Goettingen, Institute for Diagnostic and Interventional Radiology, Goettingen, Germany
| | - Christian Dullin
- University Medical Center Goettingen, Institute for Diagnostic and Interventional Radiology, Goettingen, Germany.,Max-Planck-Institute for Experimental Medicine, Goettingen, Germany
| | - Stefan Andreas
- Bayer AG, Cardiovascular Research, Lung Diseases, Wuppertal, Germany
| | - Muriel Lizé
- Bayer AG, Cardiovascular Research, Lung Diseases, Wuppertal, Germany
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Abstract
Nanotechnology has been widely applied to medical interventions for prevention, diagnostics, and therapeutics of diseases, and the application of nanotechnology for medical purposes, which is called as a term "nanomedicine" has received tremendous attention. In particular, the design and development of nanoparticle for biosensors have received a great deal of attention, since those are most impactful area of clinical translation showing potential breakthrough in early diagnosis of diseases such as cancers and infections. For example, the nanoparticles that have intrinsic unique features such as magnetic responsive characteristics or photoluminescence can be utilized for noninvasive visualization of inner body. Drug delivery that makes use of drug-containing nanoparticles as a carrier is another field of study, in which the particulate form nanomedicine is given by parenteral administration for further systemic targeting to pathological tissues. In addition, encapsulation into nanoparticles gives the opportunity to secure the sensitive therapeutic payloads that are readily degraded or deactivated until reached to the target in biological environments, or to provide sufficient solubilization (e.g., to deliver compounds which have physicochemical properties that strongly limit their aqueous solubility and therefore systemic bioavailability). The nanomedicine is further intended to enhance the targeting index such as increased specificity and reduced false binding, thus improve the diagnostic and therapeutic performances. In this chapter, principles of nanomaterials for medicine will be thoroughly covered with applications for imaging-based diagnostics and therapeutics.
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Affiliation(s)
- Jinmyoung Joo
- Department of Biomedical Engineering, Ulsan National Institute of Science and Technology, Ulsan, South Korea.
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8
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Peruzzi N, Veress B, Dahlin LB, Salditt T, Andersson M, Eckermann M, Frohn J, Robisch AL, Bech M, Ohlsson B. 3D analysis of the myenteric plexus of the human bowel by X-ray phase-contrast tomography - a future method? Scand J Gastroenterol 2020; 55:1261-1267. [PMID: 32907418 DOI: 10.1080/00365521.2020.1815079] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
OBJECTIVES Light microscopical analysis in two dimensions, combined with immunohistochemistry, is presently the gold standard to describe the enteric nervous system (ENS). Our aim was to assess the usefulness of three-dimensional (3D) imaging by X-ray phase-contrast tomography in evaluating the ENS of the human bowel. MATERIAL AND METHODS Myenteric ganglia were identified in full-thickness biopsies of the ileum and colon by hematoxylin & eosin staining. A1-mm biopsy punch was taken from the paraffin blocks and placed into a Kapton® tube for subsequent tomographic investigation. The samples were scanned, without further preparation, using phase-contrast tomography at two different scales: overview scans (performed with laboratory setups), which allowed localization of the nervous tissue (∼1µm effective voxel size); and high-resolution scans (performed with a synchrotron endstation), which imaged localized regions of 320x320x320 µm3 (176 nm effective voxel size). RESULTS The contrast allowed us to follow the shape and the size changes of the ganglia, as well as to study their cellular components together with the cells and cellular projections of the periganglional space. Furthermore, it was possible to show the 3D network of the myenteric plexus and to quantify its volume within the samples. CONCLUSIONS Phase-contrast X-ray tomography can be applied for volume analyses of the human ENS and to study tissue components in unstained paraffin-embedded tissue biopsies. This technique could potentially be used to study disease mechanisms, and to compare healthy and diseased tissues in clinical research.
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Affiliation(s)
- Niccolò Peruzzi
- Division of Medical Radiation Physics, Department of Clinical Sciences, Lund University, Lund, Sweden
| | - Béla Veress
- Department of Pathology, Skåne University Hospital, Malmö, Sweden
| | - Lars B Dahlin
- Department of Translational Medicine - Hand Surgery, Lund University, Malmö, Sweden.,Department of Hand Surgery, Skåne University Hospital, Malmö, Sweden
| | - Tim Salditt
- Institute for X-Ray Physics, University of Göttingen, Göttingen, Germany.,Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, Germany
| | - Mariam Andersson
- Department of Applied Mathematics and Computer Science, Technical University of Denmark, Lyngby, Denmark.,Danish Research Centre for Magnetic Resonance (DRCMR), Center for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Hvidovre, Hvidovre, Denmark
| | - Marina Eckermann
- Institute for X-Ray Physics, University of Göttingen, Göttingen, Germany.,Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, Germany
| | - Jasper Frohn
- Institute for X-Ray Physics, University of Göttingen, Göttingen, Germany
| | - Anna-Lena Robisch
- Institute for X-Ray Physics, University of Göttingen, Göttingen, Germany
| | - Martin Bech
- Division of Medical Radiation Physics, Department of Clinical Sciences, Lund University, Lund, Sweden
| | - Bodil Ohlsson
- Lund University, Skåne University Hospital, Department of Internal Medicine, Malmö, Sweden
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9
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Günther B, Gradl R, Jud C, Eggl E, Huang J, Kulpe S, Achterhold K, Gleich B, Dierolf M, Pfeiffer F. The versatile X-ray beamline of the Munich Compact Light Source: design, instrumentation and applications. JOURNAL OF SYNCHROTRON RADIATION 2020; 27:1395-1414. [PMID: 32876618 PMCID: PMC7467334 DOI: 10.1107/s1600577520008309] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2020] [Accepted: 06/22/2020] [Indexed: 05/08/2023]
Abstract
Inverse Compton scattering provides means to generate low-divergence partially coherent quasi-monochromatic, i.e. synchrotron-like, X-ray radiation on a laboratory scale. This enables the transfer of synchrotron techniques into university or industrial environments. Here, the Munich Compact Light Source is presented, which is such a compact synchrotron radiation facility based on an inverse Compton X-ray source (ICS). The recent improvements of the ICS are reported first and then the various experimental techniques which are most suited to the ICS installed at the Technical University of Munich are reviewed. For the latter, a multipurpose X-ray application beamline with two end-stations was designed. The beamline's design and geometry are presented in detail including the different set-ups as well as the available detector options. Application examples of the classes of experiments that can be performed are summarized afterwards. Among them are dynamic in vivo respiratory imaging, propagation-based phase-contrast imaging, grating-based phase-contrast imaging, X-ray microtomography, K-edge subtraction imaging and X-ray spectroscopy. Finally, plans to upgrade the beamline in order to enhance its capabilities are discussed.
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Affiliation(s)
- Benedikt Günther
- Department of Physics, Technical University of Munich, James-Franck-Straße 1, 85748 Garching, Germany
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
| | - Regine Gradl
- Department of Physics, Technical University of Munich, James-Franck-Straße 1, 85748 Garching, Germany
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
| | - Christoph Jud
- Department of Physics, Technical University of Munich, James-Franck-Straße 1, 85748 Garching, Germany
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
| | - Elena Eggl
- Department of Physics, Technical University of Munich, James-Franck-Straße 1, 85748 Garching, Germany
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
| | - Juanjuan Huang
- Department of Physics, Technical University of Munich, James-Franck-Straße 1, 85748 Garching, Germany
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
| | - Stephanie Kulpe
- Department of Physics, Technical University of Munich, James-Franck-Straße 1, 85748 Garching, Germany
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
| | - Klaus Achterhold
- Department of Physics, Technical University of Munich, James-Franck-Straße 1, 85748 Garching, Germany
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
| | - Bernhard Gleich
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
| | - Martin Dierolf
- Department of Physics, Technical University of Munich, James-Franck-Straße 1, 85748 Garching, Germany
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
| | - Franz Pfeiffer
- Department of Physics, Technical University of Munich, James-Franck-Straße 1, 85748 Garching, Germany
- Munich School of BioEngineering, Technical University of Munich, Boltzmannstraße 11, 85748 Garching, Germany
- Department of Diagnostic and Interventional Radiology, Klinikum rechts der Isar, Technical University of Munich, Ismaninger Straße 22, 81675 Munich, Germany
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10
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In vivo monitoring of bone microstructure by propagation-based phase-contrast computed tomography using monochromatic synchrotron light. J Transl Med 2020; 100:72-83. [PMID: 31641229 DOI: 10.1038/s41374-019-0337-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Revised: 10/03/2019] [Accepted: 10/03/2019] [Indexed: 11/09/2022] Open
Abstract
Hard X-ray phase-contrast imaging is sensitive to density variation in objects and shows a dose advantage for in vivo observation over absorption-contrast imaging. We examined the capability of propagation-based phase-contrast tomography (PB-PCT) with single-distance phase retrieval for tracking of bone structure and mineral changes using monochromatic synchrotron light. Female mice underwent ovariectomy and drill-hole surgery in the right tibial diaphysis and were divided into two groups: OVX and OVX-E (n = 6 each); the latter group was treated with intraperitoneal administration of 14,15-epoxyeicosatrienoic acid (14,15-EET) for promoting bone repair. Age-matched mice subjected to sham ovariectomy and drill-hole surgery (Sham) were also prepared (n = 6). In vivo CT scans of the drilled defect were acquired 3, 7, and 11 days after surgery, and tomographic images were matched by three-dimensional registration between successive time points for monitoring the process of defect filling. In addition, using absorption-contrast CT as the reference method, the validity of PB-PCT was evaluated in one mouse by comparing images of tibial metaphyseal bone between the two methods in terms of bone geometry as well as the measure of mineralization. Although phase retrieval is strictly valid only for single-material objects, PB-PCT, with its lower radiation dose, could provide a depiction of bone structure similar to that from absorption-contrast CT. There was a significant correlation of linear absorption coefficients between the two methods, indicating the possibility of a rough estimate of the measure of mineralization by PB-PCT. Indeed, delayed bone regeneration (OVX vs. Sham) and the efficacy of 14,15-EET for improving osteoporotic bone repair (OVX-E vs. OVX) could be detected in both bone volume and mineralization by PB-PCT. Thus, in combination with single-distance phase retrieval, PB-PCT would have great potential for providing a valuable tool to track changes in bone structure and mineralization, and for evaluating the effects of therapeutic interventions as well.
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11
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Zhao Y, Ji D, Chen Y, Jian J, Zhao X, Zhao Q, Lv W, Xin X, Yang T, Hu C. A new in-line X-ray phase-contrast computed tomography reconstruction algorithm based on adaptive-weighted anisotropic TpV regularization for insufficient data. JOURNAL OF SYNCHROTRON RADIATION 2019; 26:1330-1342. [PMID: 31274462 DOI: 10.1107/s1600577519005095] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2019] [Accepted: 04/13/2019] [Indexed: 06/09/2023]
Abstract
In-line X-ray phase-contrast computed tomography (IL-PCCT) is a valuable tool for revealing the internal detailed structures in weakly absorbing objects (e.g. biological soft tissues), and has a great potential to become clinically applicable. However, the long scanning time for IL-PCCT will result in a high radiation dose to biological samples, and thus impede the wider use of IL-PCCT in clinical and biomedical imaging. To alleviate this problem, a new iterative CT reconstruction algorithm is presented that aims to decrease the radiation dose by reducing the projection views, while maintaining the high quality of reconstructed images. The proposed algorithm combines the adaptive-weighted anisotropic total p-variation (AwaTpV, 0 < p < 1) regularization technique with projection onto convex sets (POCS) strategy. Noteworthy, the AwaTpV regularization term not only contains the horizontal and vertical image gradients but also adds the diagonal image gradients in order to enforce the directional continuity in the gradient domain. To evaluate the effectiveness and ability of the proposed algorithm, experiments with a numerical phantom and synchrotron IL-PCCT were performed, respectively. The results demonstrated that the proposed algorithm had the ability to significantly reduce the artefacts caused by insufficient data and effectively preserved the edge details under noise-free and noisy conditions, and thus could be used as an effective approach to decrease the radiation dose for IL-PCCT.
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Affiliation(s)
- Yuqing Zhao
- School of Biomedical Engineering and Technology, Tianjin Medical University, Tianjin 300070, People's Republic of China
| | - Dongjiang Ji
- The School of Science, Tianjin University of Technology and Education, Tianjin 300222, People's Republic of China
| | - Yingpin Chen
- School of Physics and Information Engineering, Minnan Normal University, 363000 Fujian, People's Republic of China
| | - Jianbo Jian
- Radiation Oncology Department, Tianjin Medical University General Hospital, Tianjin 300070, People's Republic of China
| | - Xinyan Zhao
- Liver Research Center, Beijing Friendship Hospital, Capital Medical University, 100050 Beijing, People's Republic of China
| | - Qi Zhao
- School of Biomedical Engineering and Technology, Tianjin Medical University, Tianjin 300070, People's Republic of China
| | - Wenjuan Lv
- School of Biomedical Engineering and Technology, Tianjin Medical University, Tianjin 300070, People's Republic of China
| | - Xiaohong Xin
- School of Biomedical Engineering and Technology, Tianjin Medical University, Tianjin 300070, People's Republic of China
| | - Tingting Yang
- School of Biomedical Engineering and Technology, Tianjin Medical University, Tianjin 300070, People's Republic of China
| | - Chunhong Hu
- School of Biomedical Engineering and Technology, Tianjin Medical University, Tianjin 300070, People's Republic of China
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12
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Larsson E, Gürsoy D, De Carlo F, Lilleodden E, Storm M, Wilde F, Hu K, Müller M, Greving I. Nanoporous gold: a hierarchical and multiscale 3D test pattern for characterizing X-ray nano-tomography systems. JOURNAL OF SYNCHROTRON RADIATION 2019; 26:194-204. [PMID: 30655485 PMCID: PMC6337890 DOI: 10.1107/s1600577518015242] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2018] [Accepted: 10/28/2018] [Indexed: 05/21/2023]
Abstract
Full-field transmission X-ray microscopy (TXM) is a well established technique, available at various synchrotron beamlines around the world as well as by laboratory benchtop devices. One of the major TXM challenges, due to its nanometre-scale resolution, is the overall instrument stability during the acquisition of the series of tomographic projections. The ability to correct for vertical and horizontal distortions of each projection image during acquisition is necessary in order to achieve the effective 3D spatial resolution. The effectiveness of such an image alignment is also heavily influenced by the absorption properties and strong contrast of specific features in the scanned sample. Here it is shown that nanoporous gold (NPG) can be used as an ideal 3D test pattern for evaluating and optimizing the performance of a TXM instrument for hard X-rays at a synchrotron beamline. Unique features of NPG, such as hierarchical structures at multiple length scales and high absorbing capabilities, makes it an ideal choice for characterization, which involves a combination of a rapid-alignment algorithm applied on the acquired projections followed by the extraction of a set of both 2D- and 3D-descriptive image parameters. This protocol can be used for comparing the efficiency of TXM instruments at different synchrotron beamlines in the world or benchtop devices, based on a reference library of scanned NPG samples, containing information about the estimated horizontal and vertical alignment values, 2D qualitative parameters and quantitative 3D parameters. The possibility to tailor the ligament sizes of NPG to match the achievable resolution in combination with the high electron density of gold makes NPG an ideal 3D test pattern for evaluating the status and performance of a given synchrotron-based or benchtop-based TXM setup.
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Affiliation(s)
- Emanuel Larsson
- Institute of Materials Research, Helmholtz-Zentrum Geesthacht, Max-Planck-Straße 1, Geesthacht 21502, Germany
| | - Doğa Gürsoy
- Advanced Photon Source, Argonne National Laboratory, Argonne, IL 60439, USA
- Department of Electrical Engineering and Computer Science, Northwestern University, Evanston, IL 60208, USA
| | - Francesco De Carlo
- Advanced Photon Source, Argonne National Laboratory, Argonne, IL 60439, USA
| | - Erica Lilleodden
- Institute of Materials Research, Helmholtz-Zentrum Geesthacht, Max-Planck-Straße 1, Geesthacht 21502, Germany
- Institute of Advanced Ceramics, Hamburg University of Technology, Hamburg 21073, Germany
| | | | - Fabian Wilde
- Institute of Materials Research, Helmholtz-Zentrum Geesthacht, Max-Planck-Straße 1, Geesthacht 21502, Germany
| | - Kaixiong Hu
- School of Logistics Engineering, Wuhan University of Technology, 1040 Heping Road, Wuhan, Hubei 430063, People’s Republic of China
| | - Martin Müller
- Institute of Materials Research, Helmholtz-Zentrum Geesthacht, Max-Planck-Straße 1, Geesthacht 21502, Germany
| | - Imke Greving
- Institute of Materials Research, Helmholtz-Zentrum Geesthacht, Max-Planck-Straße 1, Geesthacht 21502, Germany
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13
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Wagner WL, Wuennemann F, Pacilé S, Albers J, Arfelli F, Dreossi D, Biederer J, Konietzke P, Stiller W, Wielpütz MO, Accardo A, Confalonieri M, Cova M, Lotz J, Alves F, Kauczor HU, Tromba G, Dullin C. Towards synchrotron phase-contrast lung imaging in patients - a proof-of-concept study on porcine lungs in a human-scale chest phantom. JOURNAL OF SYNCHROTRON RADIATION 2018; 25:1827-1832. [PMID: 30407195 DOI: 10.1107/s1600577518013401] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Accepted: 09/20/2018] [Indexed: 05/23/2023]
Abstract
In-line free propagation phase-contrast synchrotron tomography of the lungs has been shown to provide superior image quality compared with attenuation-based computed tomography (CT) in small-animal studies. The present study was performed to prove the applicability on a human-patient scale using a chest phantom with ventilated fresh porcine lungs. Local areas of interest were imaged with a pixel size of 100 µm, yielding a high-resolution depiction of anatomical hallmarks of healthy lungs and artificial lung nodules. Details like fine spiculations into surrounding alveolar spaces were shown on a micrometre scale. Minor differences in artificial lung nodule density were detected by phase retrieval. Since we only applied a fraction of the X-ray dose used for clinical high-resolution CT scans, it is believed that this approach may become applicable to the detailed assessment of focal lung lesions in patients in the future.
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Affiliation(s)
- Willi L Wagner
- Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany
| | - Felix Wuennemann
- Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany
| | | | - Jonas Albers
- Institute for Diagnostic and Interventional Radiology, University Medical Center Goettingen, Goettingen, Germany
| | - Fulvia Arfelli
- Department of Physics, University of Trieste and INFN, Trieste, Italy
| | | | - Jürgen Biederer
- Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany
| | - Philip Konietzke
- Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany
| | - Wolfram Stiller
- Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany
| | - Mark O Wielpütz
- Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany
| | - Agostino Accardo
- Department of Engineering and Architecture, University of Trieste, Trieste, Italy
| | | | - Maria Cova
- Department of Radiology, University of Trieste, ASUITS, Trieste, Italy
| | - Joachim Lotz
- Institute for Diagnostic and Interventional Radiology, University Medical Center Goettingen, Goettingen, Germany
| | - Frauke Alves
- Institute for Diagnostic and Interventional Radiology, University Medical Center Goettingen, Goettingen, Germany
| | - Hans Ulrich Kauczor
- Diagnostic and Interventional Radiology, University Hospital Heidelberg, Heidelberg, Germany
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14
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Goyens J, Vasilopoulou-Kampitsi M, Claes R, Sijbers J, Mancini L. Enhanced contrast in X-ray microtomographic images of the membranous labyrinth using different X-ray sources and scanning modes. J Anat 2018; 233:770-782. [PMID: 30277260 DOI: 10.1111/joa.12885] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/20/2018] [Indexed: 12/21/2022] Open
Abstract
The vestibular system, located in the inner ear, plays a crucial role in balance and gaze stabilisation by sensing head movements. The interconnected tubes with membranous walls of the vestibular system are located in the skull bone (the 'membranous labyrinth'). Unfortunately, these membranes are very hard to visualise using three-dimensional (3D) X-ray imaging techniques. This difficulty arises due to the embedment of the membranes in the dense skull bone, the thinness of the membranes, and the small difference in X-ray absorption between the membranes and the surrounding fluid. In this study, we compared the visualisation of very small specimens (lizard heads with vestibular systems smaller than 3 mm) by X-ray computed micro-tomography (μCT) based on synchrotron radiation and conventional sources. A visualisation protocol using conventional X-ray μCT would be very useful thanks to the ease of access and lower cost. Careful optimisation of the acquisition parameters enables detection of the membranes by using μCT scanners based on conventional microfocus sources, but in some cases a low contrast-to-noise ratio (CNR) prevents fast and reliable segmentation of the membranes. Synchrotron radiation μCT proved to be preferable for the visualisation of the small samples with very thin membranes, because of their high demands for spatial and contrast resolution. The best contrast was obtained by using synchrotron radiation μCT working in phase-contrast mode, leading to up to twice as high CNRs than the best conventional μCT results. The CNR of the synchrotron radiation μCT scans was sufficiently high enough to enable the construction of a 3D model by the means of semi-automatic segmentation of the membranous labyrinth. Membrane thickness was found to range between 2.7 and 36.3 μm. Hence, the minimal membrane thickness was found to be much smaller than described previously in the literature (between 10 and 50 μm).
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Affiliation(s)
- Jana Goyens
- Laboratory of Functional Morphology, University of Antwerp, Antwerp, Belgium
| | | | - Raf Claes
- Laboratory of Functional Morphology, University of Antwerp, Antwerp, Belgium
| | - Jan Sijbers
- Imec-Vision Lab, University of Antwerp, Antwerp, Belgium
| | - Lucia Mancini
- Elettra - Sincrotrone Trieste S.C.p.A., Basovizza, Trieste, Italy
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15
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Saccomano M, Albers J, Tromba G, Dobrivojević Radmilović M, Gajović S, Alves F, Dullin C. Synchrotron inline phase contrast µCT enables detailed virtual histology of embedded soft-tissue samples with and without staining. JOURNAL OF SYNCHROTRON RADIATION 2018; 25:1153-1161. [PMID: 29979177 DOI: 10.1107/s1600577518005489] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2017] [Accepted: 04/09/2018] [Indexed: 05/20/2023]
Abstract
Synchrotron radiation micro-computed tomography (SRµCT) based virtual histology, in combination with dedicated ex vivo staining protocols and/or phase contrast, is an emerging technology that makes use of three-dimensional images to provide novel insights into the structure of tissue samples at microscopic resolution with short acquisition times of the order of minutes or seconds. However, the high radiation dose creates special demands on sample preparation and staining. As a result of the lack of specific staining in virtual histology, it can supplement but not replace classical histology. Therefore, the aim of this study was to establish and compare optimized ex vivo staining and acquisition protocols for SRµCT-based virtual histology of soft-tissue samples, which could be integrated into the standard workflow of classical histology. The high grade of coherence of synchrotron radiation allows the application of propagation-based phase contrast imaging (PBI). In this study, PBI yielded a strong increase in image quality even at lower radiation doses and consequently prevented any damage to the tissue samples or the embedding material. This work has demonstrated that the improvement in contrast-to-noise ratio by PBI enabled label-free virtual histology of soft-tissue specimens embedded in paraffin to a level of detail that exceeds that achieved with staining protocols.
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Affiliation(s)
- Mara Saccomano
- Translational Molecular Imaging, Max Planck Institute for Experimental Medicine, Germany
| | - Jonas Albers
- Translational Molecular Imaging, Max Planck Institute for Experimental Medicine, Germany
| | | | | | - Srećko Gajović
- Croatian Institute for Brain Research, University of Zagreb School of Medicine, Zagreb, Croatia
| | - Frauke Alves
- Translational Molecular Imaging, Max Planck Institute for Experimental Medicine, Germany
| | - Christian Dullin
- Translational Molecular Imaging, Max Planck Institute for Experimental Medicine, Germany
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16
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X-ray based virtual histology allows guided sectioning of heavy ion stained murine lungs for histological analysis. Sci Rep 2018; 8:7712. [PMID: 29769600 PMCID: PMC5955938 DOI: 10.1038/s41598-018-26086-0] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Accepted: 05/01/2018] [Indexed: 01/10/2023] Open
Abstract
Examination of histological or immunohistochemically stained 2D sections of embedded tissue is one of the most frequently used tools in biomedical research and clinical routine. Since to date, targeted sectioning of specific regions of interest (ROI) in the sample is not possible, we aimed at developing a guided sectioning approach based on x-ray 3D virtual histology for heavy ion stained murine lung samples. For this purpose, we increased the contrast to noise ratio of a standard benchtop microCT by 5–10-fold using free-propagation phase contrast imaging and thus substantially improved image quality. We then show that microCT 3D datasets deliver more precise anatomical information and quantification of the sample than traditional histological sections, which display deformations of the tissue. To quantify these deformations caused by sectioning we developed the “Displacement Index (DI)”, which combines block-matching with the calculation of the local mutual information. We show that the DI substantially decreases when a femtosecond laser microtome is used for sections as opposed to a traditional microtome. In conclusion, our microCT based virtual histology approach can be used as a supplement and a guidance tool for traditional histology, providing 3D measurement capabilities and offering the ability to perform sectioning directly at an ROI.
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17
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Dullin C, Albers J, Tromba G, Andrä M, Ramilli M, Bergamaschi A. MÖNCH detector enables fast and low-dose free-propagation phase-contrast computed tomography of in situ mouse lungs. JOURNAL OF SYNCHROTRON RADIATION 2018; 25:565-569. [PMID: 29488938 PMCID: PMC5829681 DOI: 10.1107/s160057751701668x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/23/2017] [Accepted: 11/20/2017] [Indexed: 06/08/2023]
Abstract
Due to the complexity of the underlying pathomechanism, in vivo mouse lung-disease models continue to be of great importance in preclinical respiratory research. Longitudinal studies following the cause of a disease or evaluating treatment efficacy are of particular interest but challenging due to the small size of the mouse lung and the fast breathing rate. Synchrotron-based in-line phase-contrast computed tomography imaging has been successfully applied in lung research in various applications, but mostly at dose levels that forbid longitudinal in vivo studies. Here, the novel charge-integrating hybrid detector MÖNCH is presented, which enables imaging of mouse lungs at a pixel size of 25 µm, in less than 10 s and with an entrance dose of about 70 mGy, which therefore will allow longitudinal lung disease studies to be performed in mouse models.
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Affiliation(s)
- Christian Dullin
- Institute for Diagnostic and Interventional Radiology, University Medical Center, Robert Koch Strasse 40, Göttingen, Lower Saxony 37075, Germany
- Elettra-Sincrotrone Trieste, Strada Statale 14, km 163.5 in AREA Science Park, Trieste, Friuli Venezia Giulia 34149, Italy
| | - Jonas Albers
- Institute for Diagnostic and Interventional Radiology, University Medical Center, Robert Koch Strasse 40, Göttingen, Lower Saxony 37075, Germany
| | - Giuliana Tromba
- Elettra-Sincrotrone Trieste, Strada Statale 14, km 163.5 in AREA Science Park, Trieste, Friuli Venezia Giulia 34149, Italy
| | - Marie Andrä
- Paul Scherrer Institute, 5232 Villigen PSI, Switzerland
| | - Marco Ramilli
- Paul Scherrer Institute, 5232 Villigen PSI, Switzerland
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18
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Markus MA, Borowik S, Reichardt M, Tromba G, Alves F, Dullin C. X-ray-based lung function measurement reveals persistent loss of lung tissue elasticity in mice recovered from allergic airway inflammation. Am J Physiol Lung Cell Mol Physiol 2017; 313:L763-L771. [PMID: 28775094 DOI: 10.1152/ajplung.00136.2017] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2017] [Revised: 06/29/2017] [Accepted: 07/28/2017] [Indexed: 11/22/2022] Open
Abstract
Chronic asthma patients experience difficulties even years after the inciting allergen. Although studies in small animal asthma models have enormously advanced progress in uncovering the mechanisms of inception and development of the disease, little is known about the processes involved in the persistence of asthma symptoms in the absence of allergen exposure. Long-term asthma mouse models have so far been scarce or not been able to reproduce the findings in patients. Here we used a common ovalbumin-induced acute allergic airway inflammation mouse model to study lung function and remodeling after a 4-mo recovery period. We show by X-ray-based lung function measurements that the recovered mice continue to show impaired lung function by displaying significant air trapping compared with controls. High-resolution synchrotron phase-contrast computed tomography of structural alterations and diaphragm motion analysis suggest that these changes in pulmonary function are the result of a pronounced loss in lung elasticity. Histology of lung sections confirmed that this is most likely caused by a decrease in elastic fibers, indicating that remodeling can develop or persist independent of acute inflammation and is closely related to a loss in lung function. Our findings demonstrate that this X-ray-based imaging platform has the potential to comprehensively and noninvasively unravel long-term effects in preclinical mouse models of allergic airway inflammation and thus benefits our understanding of chronic asthma.
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Affiliation(s)
- M Andrea Markus
- Max-Plank-Institute for Experimental Medicine, Göttingen, Germany
| | - Sergej Borowik
- Institute for Hematology and Medical Oncology, University Medical Center Göttingen, Germany
| | - Marius Reichardt
- Institute for Hematology and Medical Oncology, University Medical Center Göttingen, Germany
| | | | - Frauke Alves
- Max-Plank-Institute for Experimental Medicine, Göttingen, Germany.,Institute for Hematology and Medical Oncology, University Medical Center Göttingen, Germany.,Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Germany
| | - Christian Dullin
- Synchrotron Light Source "Elettra," Trieste, Italy; and .,Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Germany
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19
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Pelaz B, Alexiou C, Alvarez-Puebla RA, Alves F, Andrews AM, Ashraf S, Balogh LP, Ballerini L, Bestetti A, Brendel C, Bosi S, Carril M, Chan WCW, Chen C, Chen X, Chen X, Cheng Z, Cui D, Du J, Dullin C, Escudero A, Feliu N, Gao M, George M, Gogotsi Y, Grünweller A, Gu Z, Halas NJ, Hampp N, Hartmann RK, Hersam MC, Hunziker P, Jian J, Jiang X, Jungebluth P, Kadhiresan P, Kataoka K, Khademhosseini A, Kopeček J, Kotov NA, Krug HF, Lee DS, Lehr CM, Leong KW, Liang XJ, Ling Lim M, Liz-Marzán LM, Ma X, Macchiarini P, Meng H, Möhwald H, Mulvaney P, Nel AE, Nie S, Nordlander P, Okano T, Oliveira J, Park TH, Penner RM, Prato M, Puntes V, Rotello VM, Samarakoon A, Schaak RE, Shen Y, Sjöqvist S, Skirtach AG, Soliman MG, Stevens MM, Sung HW, Tang BZ, Tietze R, Udugama BN, VanEpps JS, Weil T, Weiss PS, Willner I, Wu Y, Yang L, Yue Z, Zhang Q, Zhang Q, Zhang XE, Zhao Y, Zhou X, Parak WJ. Diverse Applications of Nanomedicine. ACS NANO 2017; 11:2313-2381. [PMID: 28290206 PMCID: PMC5371978 DOI: 10.1021/acsnano.6b06040] [Citation(s) in RCA: 765] [Impact Index Per Article: 109.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2016] [Indexed: 04/14/2023]
Abstract
The design and use of materials in the nanoscale size range for addressing medical and health-related issues continues to receive increasing interest. Research in nanomedicine spans a multitude of areas, including drug delivery, vaccine development, antibacterial, diagnosis and imaging tools, wearable devices, implants, high-throughput screening platforms, etc. using biological, nonbiological, biomimetic, or hybrid materials. Many of these developments are starting to be translated into viable clinical products. Here, we provide an overview of recent developments in nanomedicine and highlight the current challenges and upcoming opportunities for the field and translation to the clinic.
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Affiliation(s)
- Beatriz Pelaz
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
| | - Christoph Alexiou
- ENT-Department, Section of Experimental Oncology & Nanomedicine
(SEON), Else Kröner-Fresenius-Stiftung-Professorship for Nanomedicine, University Hospital Erlangen, 91054 Erlangen, Germany
| | - Ramon A. Alvarez-Puebla
- Department of Physical Chemistry, Universitat Rovira I Virgili, 43007 Tarragona, Spain
- ICREA, Pg. Lluís Companys 23, 08010 Barcelona, Spain
| | - Frauke Alves
- Department of Haematology and Medical Oncology, Department of Diagnostic
and Interventional Radiology, University
Medical Center Göttingen, 37075 Göttingen Germany
- Department of Molecular Biology of Neuronal Signals, Max-Planck-Institute for Experimental Medicine, 37075 Göttingen, Germany
| | - Anne M. Andrews
- California NanoSystems Institute, Department of Chemistry
and Biochemistry and Department of Psychiatry and Semel Institute
for Neuroscience and Human Behavior, Division of NanoMedicine and Center
for the Environmental Impact of Nanotechnology, and Department of Materials Science
and Engineering, University of California,
Los Angeles, Los Angeles, California 90095, United States
| | - Sumaira Ashraf
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
| | - Lajos P. Balogh
- AA Nanomedicine & Nanotechnology Consultants, North Andover, Massachusetts 01845, United States
| | - Laura Ballerini
- International School for Advanced Studies (SISSA/ISAS), 34136 Trieste, Italy
| | - Alessandra Bestetti
- School of Chemistry & Bio21 Institute, University of Melbourne, Parkville, Victoria 3010, Australia
| | - Cornelia Brendel
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
| | - Susanna Bosi
- Department of Chemical
and Pharmaceutical Sciences, University
of Trieste, 34127 Trieste, Italy
| | - Monica Carril
- CIC biomaGUNE, Paseo de Miramón 182, 20014, Donostia - San Sebastián, Spain
- Ikerbasque, Basque Foundation
for Science, 48013 Bilbao, Spain
| | - Warren C. W. Chan
- Institute of Biomaterials
and Biomedical Engineering, University of
Toronto, Toronto, Ontario M5S 3G9, Canada
| | - Chunying Chen
- CAS Center for Excellence in Nanoscience and CAS Key
Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, National Center for Nanoscience and Technology of
China, Beijing 100190, China
| | - Xiaodong Chen
- School of Materials
Science and Engineering, Nanyang Technological
University, Singapore 639798
| | - Xiaoyuan Chen
- Laboratory of Molecular Imaging and Nanomedicine,
National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, Maryland 20892, United States
| | - Zhen Cheng
- Molecular
Imaging Program at Stanford and Bio-X Program, Canary Center at Stanford
for Cancer Early Detection, Stanford University, Stanford, California 94305, United States
| | - Daxiang Cui
- Institute of Nano Biomedicine and Engineering, Department of Instrument
Science and Engineering, School of Electronic Information and Electronical
Engineering, National Center for Translational Medicine, Shanghai Jiao Tong University, 200240 Shanghai, China
| | - Jianzhong Du
- Department of Polymeric Materials, School of Materials
Science and Engineering, Tongji University, Shanghai, China
| | - Christian Dullin
- Department of Haematology and Medical Oncology, Department of Diagnostic
and Interventional Radiology, University
Medical Center Göttingen, 37075 Göttingen Germany
| | - Alberto Escudero
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
- Instituto
de Ciencia de Materiales de Sevilla. CSIC, Universidad de Sevilla, 41092 Seville, Spain
| | - Neus Feliu
- Department of Clinical Science, Intervention, and Technology (CLINTEC), Karolinska Institutet, 141 86 Stockholm, Sweden
| | - Mingyuan Gao
- Institute of Chemistry, Chinese
Academy of Sciences, 100190 Beijing, China
| | | | - Yury Gogotsi
- Department of Materials Science and Engineering and A.J. Drexel Nanomaterials
Institute, Drexel University, Philadelphia, Pennsylvania 19104, United States
| | - Arnold Grünweller
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
| | - Zhongwei Gu
- College of Polymer Science and Engineering, Sichuan University, 610000 Chengdu, China
| | - Naomi J. Halas
- Departments of Physics and Astronomy, Rice
University, Houston, Texas 77005, United
States
| | - Norbert Hampp
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
| | - Roland K. Hartmann
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
| | - Mark C. Hersam
- Departments of Materials Science and Engineering, Chemistry,
and Medicine, Northwestern University, Evanston, Illinois 60208, United States
| | - Patrick Hunziker
- University Hospital, 4056 Basel, Switzerland
- CLINAM,
European Foundation for Clinical Nanomedicine, 4058 Basel, Switzerland
| | - Ji Jian
- Department of Polymer Science and Engineering and Center for
Bionanoengineering and Department of Chemical and Biological Engineering, Zhejiang University, 310027 Hangzhou, China
| | - Xingyu Jiang
- CAS Center for Excellence in Nanoscience and CAS Key
Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, National Center for Nanoscience and Technology of
China, Beijing 100190, China
| | - Philipp Jungebluth
- Thoraxklinik Heidelberg, Universitätsklinikum
Heidelberg, 69120 Heidelberg, Germany
| | - Pranav Kadhiresan
- Institute of Biomaterials
and Biomedical Engineering, University of
Toronto, Toronto, Ontario M5S 3G9, Canada
| | | | | | - Jindřich Kopeček
- Biomedical Polymers Laboratory, University of Utah, Salt Lake City, Utah 84112, United States
| | - Nicholas A. Kotov
- Emergency Medicine, University of Michigan, Ann Arbor, Michigan 48019, United States
| | - Harald F. Krug
- EMPA, Federal Institute for Materials
Science and Technology, CH-9014 St. Gallen, Switzerland
| | - Dong Soo Lee
- Department of Molecular Medicine and Biopharmaceutical
Sciences and School of Chemical and Biological Engineering, Seoul National University, Seoul, South Korea
| | - Claus-Michael Lehr
- Department of Pharmacy, Saarland University, 66123 Saarbrücken, Germany
- HIPS - Helmhotz Institute for Pharmaceutical Research Saarland, Helmholtz-Center for Infection Research, 66123 Saarbrücken, Germany
| | - Kam W. Leong
- Department of Biomedical Engineering, Columbia University, New York City, New York 10027, United States
| | - Xing-Jie Liang
- CAS Center for Excellence in Nanoscience and CAS Key
Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, National Center for Nanoscience and Technology of
China, Beijing 100190, China
- Laboratory of Controllable Nanopharmaceuticals, Chinese Academy of Sciences (CAS), 100190 Beijing, China
| | - Mei Ling Lim
- Department of Clinical Science, Intervention, and Technology (CLINTEC), Karolinska Institutet, 141 86 Stockholm, Sweden
| | - Luis M. Liz-Marzán
- CIC biomaGUNE, Paseo de Miramón 182, 20014, Donostia - San Sebastián, Spain
- Ikerbasque, Basque Foundation
for Science, 48013 Bilbao, Spain
- Biomedical Research Networking Center in Bioengineering Biomaterials and Nanomedicine, Ciber-BBN, 20014 Donostia - San Sebastián, Spain
| | - Xiaowei Ma
- Laboratory of Controllable Nanopharmaceuticals, Chinese Academy of Sciences (CAS), 100190 Beijing, China
| | - Paolo Macchiarini
- Laboratory of Bioengineering Regenerative Medicine (BioReM), Kazan Federal University, 420008 Kazan, Russia
| | - Huan Meng
- California NanoSystems Institute, Department of Chemistry
and Biochemistry and Department of Psychiatry and Semel Institute
for Neuroscience and Human Behavior, Division of NanoMedicine and Center
for the Environmental Impact of Nanotechnology, and Department of Materials Science
and Engineering, University of California,
Los Angeles, Los Angeles, California 90095, United States
| | - Helmuth Möhwald
- Department of Interfaces, Max-Planck
Institute of Colloids and Interfaces, 14476 Potsdam, Germany
| | - Paul Mulvaney
- School of Chemistry & Bio21 Institute, University of Melbourne, Parkville, Victoria 3010, Australia
| | - Andre E. Nel
- California NanoSystems Institute, Department of Chemistry
and Biochemistry and Department of Psychiatry and Semel Institute
for Neuroscience and Human Behavior, Division of NanoMedicine and Center
for the Environmental Impact of Nanotechnology, and Department of Materials Science
and Engineering, University of California,
Los Angeles, Los Angeles, California 90095, United States
| | - Shuming Nie
- Emory University, Atlanta, Georgia 30322, United States
| | - Peter Nordlander
- Departments of Physics and Astronomy, Rice
University, Houston, Texas 77005, United
States
| | - Teruo Okano
- Tokyo Women’s Medical University, Tokyo 162-8666, Japan
| | | | - Tai Hyun Park
- Department of Molecular Medicine and Biopharmaceutical
Sciences and School of Chemical and Biological Engineering, Seoul National University, Seoul, South Korea
- Advanced Institutes of Convergence Technology, Suwon, South Korea
| | - Reginald M. Penner
- Department of Chemistry, University of
California, Irvine, California 92697, United States
| | - Maurizio Prato
- Department of Chemical
and Pharmaceutical Sciences, University
of Trieste, 34127 Trieste, Italy
- CIC biomaGUNE, Paseo de Miramón 182, 20014, Donostia - San Sebastián, Spain
- Ikerbasque, Basque Foundation
for Science, 48013 Bilbao, Spain
| | - Victor Puntes
- ICREA, Pg. Lluís Companys 23, 08010 Barcelona, Spain
- Institut Català de Nanotecnologia, UAB, 08193 Barcelona, Spain
- Vall d’Hebron University Hospital
Institute of Research, 08035 Barcelona, Spain
| | - Vincent M. Rotello
- Department
of Chemistry, University of Massachusetts, Amherst, Massachusetts 01003, United States
| | - Amila Samarakoon
- Institute of Biomaterials
and Biomedical Engineering, University of
Toronto, Toronto, Ontario M5S 3G9, Canada
| | - Raymond E. Schaak
- Department of Chemistry, The
Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Youqing Shen
- Department of Polymer Science and Engineering and Center for
Bionanoengineering and Department of Chemical and Biological Engineering, Zhejiang University, 310027 Hangzhou, China
| | - Sebastian Sjöqvist
- Department of Clinical Science, Intervention, and Technology (CLINTEC), Karolinska Institutet, 141 86 Stockholm, Sweden
| | - Andre G. Skirtach
- Department of Interfaces, Max-Planck
Institute of Colloids and Interfaces, 14476 Potsdam, Germany
- Department of Molecular Biotechnology, University of Ghent, B-9000 Ghent, Belgium
| | - Mahmoud G. Soliman
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
| | - Molly M. Stevens
- Department of Materials,
Department of Bioengineering, Institute for Biomedical Engineering, Imperial College London, London SW7 2AZ, United Kingdom
| | - Hsing-Wen Sung
- Department of Chemical Engineering and Institute of Biomedical
Engineering, National Tsing Hua University, Hsinchu City, Taiwan,
ROC 300
| | - Ben Zhong Tang
- Hong Kong Branch of Chinese National Engineering Research Center for Tissue Restoration and Reconstruction, Hong Kong, China
| | - Rainer Tietze
- ENT-Department, Section of Experimental Oncology & Nanomedicine
(SEON), Else Kröner-Fresenius-Stiftung-Professorship for Nanomedicine, University Hospital Erlangen, 91054 Erlangen, Germany
| | - Buddhisha N. Udugama
- Institute of Biomaterials
and Biomedical Engineering, University of
Toronto, Toronto, Ontario M5S 3G9, Canada
| | - J. Scott VanEpps
- Emergency Medicine, University of Michigan, Ann Arbor, Michigan 48019, United States
| | - Tanja Weil
- Institut für
Organische Chemie, Universität Ulm, 89081 Ulm, Germany
- Max-Planck-Institute for Polymer Research, 55128 Mainz, Germany
| | - Paul S. Weiss
- California NanoSystems Institute, Department of Chemistry
and Biochemistry and Department of Psychiatry and Semel Institute
for Neuroscience and Human Behavior, Division of NanoMedicine and Center
for the Environmental Impact of Nanotechnology, and Department of Materials Science
and Engineering, University of California,
Los Angeles, Los Angeles, California 90095, United States
| | - Itamar Willner
- Institute of Chemistry, The Center for
Nanoscience and Nanotechnology, The Hebrew
University of Jerusalem, Jerusalem 91904, Israel
| | - Yuzhou Wu
- Max-Planck-Institute for Polymer Research, 55128 Mainz, Germany
- School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology, 430074 Wuhan, China
| | | | - Zhao Yue
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
| | - Qian Zhang
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
| | - Qiang Zhang
- School of Pharmaceutical Science, Peking University, 100191 Beijing, China
| | - Xian-En Zhang
- National Laboratory of Biomacromolecules,
CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Chaoyang District, Beijing, 100101, China
| | - Yuliang Zhao
- CAS Center for Excellence in Nanoscience and CAS Key
Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, National Center for Nanoscience and Technology of
China, Beijing 100190, China
| | - Xin Zhou
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Wolfgang J. Parak
- Fachbereich Physik, Fachbereich Medizin, Fachbereich Pharmazie, and Department of Chemistry, Philipps Universität Marburg, 35037 Marburg, Germany
- CIC biomaGUNE, Paseo de Miramón 182, 20014, Donostia - San Sebastián, Spain
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20
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Dullin C, Markus MA, Larsson E, Tromba G, Hülsmann S, Alves F. X-Ray based Lung Function measurement-a sensitive technique to quantify lung function in allergic airway inflammation mouse models. Sci Rep 2016; 6:36297. [PMID: 27805632 PMCID: PMC5090985 DOI: 10.1038/srep36297] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2016] [Accepted: 10/13/2016] [Indexed: 11/30/2022] Open
Abstract
In mice, along with the assessment of eosinophils, lung function measurements, most commonly carried out by plethysmography, are essential to monitor the course of allergic airway inflammation, to examine therapy efficacy and to correlate animal with patient data. To date, plethysmography techniques either use intubation and/or restraining of the mice and are thus invasive, or are limited in their sensitivity. We present a novel unrestrained lung function method based on low-dose planar cinematic x-ray imaging (X-Ray Lung Function, XLF) and demonstrate its performance in monitoring OVA induced experimental allergic airway inflammation in mice and an improved assessment of the efficacy of the common treatment dexamethasone. We further show that XLF is more sensitive than unrestrained whole body plethysmography (UWBP) and that conventional broncho-alveolar lavage and histology provide only limited information of the efficacy of a treatment when compared to XLF. Our results highlight the fact that a multi-parametric imaging approach as delivered by XLF is needed to address the combined cellular, anatomical and functional effects that occur during the course of asthma and in response to therapy.
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Affiliation(s)
- C Dullin
- Institute for Diagnostic and Interventional Radiology, University Medical Center Goettingen, Germany.,Italian Synchrotron Light Source 'Elettra' Trieste, Italy
| | - M A Markus
- Max-Plank-Institute for Experimental Medicine, Dept. of Molecular Biology of Neuronal Signals, Goettingen, Germany
| | - E Larsson
- Italian Synchrotron Light Source 'Elettra' Trieste, Italy
| | - G Tromba
- Italian Synchrotron Light Source 'Elettra' Trieste, Italy
| | - S Hülsmann
- Clinic for Anesthesiology, University Medical Center, Goettingen, Germany
| | - F Alves
- Institute for Diagnostic and Interventional Radiology, University Medical Center Goettingen, Germany.,Max-Plank-Institute for Experimental Medicine, Dept. of Molecular Biology of Neuronal Signals, Goettingen, Germany.,Department of Hematology and Medical Oncology, University Medical Center, Goettingen, Germany
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21
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Sena G, Nogueira L, Braz D, Almeida A, Gonzalez M, Azambuja P, Colaço M, Barroso R. Ecdysis period of Rhodnius prolixus head investigated using phase contrast synchrotron microtomography. Phys Med 2016; 32:812-7. [DOI: 10.1016/j.ejmp.2016.05.051] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/23/2016] [Revised: 05/09/2016] [Accepted: 05/10/2016] [Indexed: 10/21/2022] Open
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22
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Weber L, Langer M, Tavella S, Ruggiu A, Peyrin F. Quantitative evaluation of regularized phase retrieval algorithms on bone scaffolds seeded with bone cells. Phys Med Biol 2016; 61:N215-31. [DOI: 10.1088/0031-9155/61/9/n215] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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23
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Larsson E, Tromba G, Uvdal K, Accardo A, Monego SD, Biffi S, Garrovo C, Lorenzon A, Dullin C. Quantification of structural alterations in lung disease—a proposed analysis methodology of CT scans of preclinical mouse models and patients. Biomed Phys Eng Express 2015. [DOI: 10.1088/2057-1976/1/3/035201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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24
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Pacilè S, Brun F, Dullin C, Nesterest YI, Dreossi D, Mohammadi S, Tonutti M, Stacul F, Lockie D, Zanconati F, Accardo A, Tromba G, Gureyev TE. Clinical application of low-dose phase contrast breast CT: methods for the optimization of the reconstruction workflow. BIOMEDICAL OPTICS EXPRESS 2015; 6:3099-3112. [PMID: 26309770 PMCID: PMC4541534 DOI: 10.1364/boe.6.003099] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2015] [Revised: 07/03/2015] [Accepted: 07/06/2015] [Indexed: 05/29/2023]
Abstract
Results are presented of a feasibility study of three-dimensional X-ray tomographic mammography utilising in-line phase contrast. Experiments were performed at SYRMEP beamline of Elettra synchrotron. A specially designed plastic phantom and a mastectomy sample containing a malignant lesion were used to study the reconstructed image quality as a function of different image processing operations. Detailed evaluation and optimization of image reconstruction workflows have been carried out using combinations of several advanced computed tomography algorithms with different pre-processing and post-processing steps. Special attention was paid to the effect of phase retrieval on the diagnostic value of the reconstructed images. A number of objective image quality indices have been applied for quantitative evaluation of the results, and these were compared with subjective assessments of the same images by three experienced radiologists and one pathologist. The outcomes of this study provide practical guidelines for the optimization of image processing workflows in synchrotron-based phase-contrast mammo-tomography.
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Affiliation(s)
- S. Pacilè
- Elettra - Sincrotrone Trieste S.C.p.A., Basovizza (Trieste),
Italy
- Department of Engineering and Architecture, University of Trieste, Trieste,
Italy
| | - F. Brun
- Elettra - Sincrotrone Trieste S.C.p.A., Basovizza (Trieste),
Italy
- Department of Engineering and Architecture, University of Trieste, Trieste,
Italy
| | - C. Dullin
- Department of Diagnostic and Interventional Radiology, University Hospital Goettingen, Goettingen,
Germany
| | - Y. I. Nesterest
- Commonwealth Scientific and Industrial Research Organisation, Melbourne,
Australia
| | - D. Dreossi
- Elettra - Sincrotrone Trieste S.C.p.A., Basovizza (Trieste),
Italy
| | - S. Mohammadi
- Elettra - Sincrotrone Trieste S.C.p.A., Basovizza (Trieste),
Italy
- The Abdus Salam International Centre for Theoretical Physics, Trieste,
Italy
- now at LAC+ USC Medical Center, Los Angeles, CA,
USA
| | - M. Tonutti
- AOU - Trieste Hospital, Department of Radiology, Trieste,
Italy
| | - F. Stacul
- AOU - Trieste Hospital, Department of Radiology, Trieste,
Italy
| | - D. Lockie
- Maroondah BreastScreen, Melbourne,
Australia
| | - F. Zanconati
- Department of Medical Science-Unit of Pathology, University of Trieste, Trieste,
Italy
| | - A. Accardo
- Department of Engineering and Architecture, University of Trieste, Trieste,
Italy
| | - G. Tromba
- Elettra - Sincrotrone Trieste S.C.p.A., Basovizza (Trieste),
Italy
| | - T. E. Gureyev
- Commonwealth Scientific and Industrial Research Organisation, Melbourne,
Australia
- School of Physics and Astronomy, Monash University, Clayton, VIC,
Australia
- School of Science and Engineering, University of New England, Armidale, NSW,
Australia
- ARC Centre of Excellence in Advanced Molecular Imaging, The University of Melbourne, Parkville,
Australia
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25
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Dullin C, Larsson E, Tromba G, Markus AM, Alves F. Phase-contrast computed tomography for quantification of structural changes in lungs of asthma mouse models of different severity. JOURNAL OF SYNCHROTRON RADIATION 2015; 22:1106-11. [PMID: 26134818 PMCID: PMC4489538 DOI: 10.1107/s1600577515006177] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2014] [Accepted: 03/26/2015] [Indexed: 05/03/2023]
Abstract
Lung imaging in mouse disease models is crucial for the assessment of the severity of airway disease but remains challenging due to the small size and the high porosity of the organ. Synchrotron inline free-propagation phase-contrast computed tomography (CT) with its intrinsic high soft-tissue contrast provides the necessary sensitivity and spatial resolution to analyse the mouse lung structure in great detail. Here, this technique has been applied in combination with single-distance phase retrieval to quantify alterations of the lung structure in experimental asthma mouse models of different severity. In order to mimic an in vivo situation as close as possible, the lungs were inflated with air at a constant physiological pressure. Entire mice were embedded in agarose gel and imaged using inline free-propagation phase-contrast CT at the SYRMEP beamline (Synchrotron Light Source, `Elettra', Trieste, Italy). The quantification of the obtained phase-contrast CT data sets revealed an increasing lung soft-tissue content in mice correlating with the degree of the severity of experimental allergic airways disease. In this way, it was possible to successfully discriminate between healthy controls and mice with either mild or severe allergic airway disease. It is believed that this approach may have the potential to evaluate the efficacy of novel therapeutic strategies that target airway remodelling processes in asthma.
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Affiliation(s)
- Christian Dullin
- Institute of Diagnostic and Interventional Radiology, University Medical Center Goettingen, Robert Koch Strasse 40, Goettingen, Lower Saxony 37075, Germany
| | - Emanuel Larsson
- Elettra-Sincrotrone Trieste, Strada Statale 14, km 163,5 in AREA Science Park, Basovizza (Trieste) 34149, Italy
- Department of Architecture and Engineering, University of Trieste, Trieste, Italy
- Department of Physics, Chemistry and Biology, Linkoeping University, SE-581 83 Linkoeping, Sweden
| | - Giuliana Tromba
- Elettra-Sincrotrone Trieste, Strada Statale 14, km 163,5 in AREA Science Park, Basovizza (Trieste) 34149, Italy
| | - Andrea M. Markus
- Department of Haematology and Medical Oncology, University Medical Center Goettingen, Robert Koch Strasse 40, Goettingen, Lower Saxony 37075, Germany
| | - Frauke Alves
- Institute of Diagnostic and Interventional Radiology, University Medical Center Goettingen, Robert Koch Strasse 40, Goettingen, Lower Saxony 37075, Germany
- Department of Haematology and Medical Oncology, University Medical Center Goettingen, Robert Koch Strasse 40, Goettingen, Lower Saxony 37075, Germany
- Department of Molecular Biology of Neuronal Signals, Max Planck Institut for Experimental Medicine, Hermann-Rein-Strasse 3, Goettingen, Lower Saxony 37075, Germany
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26
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Dullin C, dal Monego S, Larsson E, Mohammadi S, Krenkel M, Garrovo C, Biffi S, Lorenzon A, Markus A, Napp J, Salditt T, Accardo A, Alves F, Tromba G. Functionalized synchrotron in-line phase-contrast computed tomography: a novel approach for simultaneous quantification of structural alterations and localization of barium-labelled alveolar macrophages within mouse lung samples. JOURNAL OF SYNCHROTRON RADIATION 2015; 22:143-55. [PMID: 25537601 PMCID: PMC4294027 DOI: 10.1107/s1600577514021730] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2014] [Accepted: 10/02/2014] [Indexed: 05/19/2023]
Abstract
Functionalized computed tomography (CT) in combination with labelled cells is virtually non-existent due to the limited sensitivity of X-ray-absorption-based imaging, but would be highly desirable to realise cell tracking studies in entire organisms. In this study we applied in-line free propagation X-ray phase-contrast CT (XPCT) in an allergic asthma mouse model to assess structural changes as well as the biodistribution of barium-labelled macrophages in lung tissue. Alveolar macrophages that were barium-sulfate-loaded and fluorescent-labelled were instilled intratracheally into asthmatic and control mice. Mice were sacrificed after 24 h, lungs were kept in situ, inflated with air and scanned utilizing XPCT at the SYRMEP beamline (Elettra Synchrotron Light Source, Italy). Single-distance phase retrieval was used to generate data sets with ten times greater contrast-to-noise ratio than absorption-based CT (in our setup), thus allowing to depict and quantify structural hallmarks of asthmatic lungs such as reduced air volume, obstruction of airways and increased soft-tissue content. Furthermore, we found a higher concentration as well as a specific accumulation of the barium-labelled macrophages in asthmatic lung tissue. It is believe that XPCT will be beneficial in preclinical asthma research for both the assessment of therapeutic response as well as the analysis of the role of the recruitment of macrophages to inflammatory sites.
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MESH Headings
- Algorithms
- Allergens/toxicity
- Animals
- Asthma/chemically induced
- Asthma/diagnostic imaging
- Asthma/pathology
- Barium Sulfate/pharmacokinetics
- Cell Line, Transformed
- Cell Movement
- Contrast Media/pharmacokinetics
- Disease Models, Animal
- Female
- Image Processing, Computer-Assisted
- Imaging, Three-Dimensional
- Lung/cytology
- Lung/diagnostic imaging
- Macrophages, Alveolar/diagnostic imaging
- Macrophages, Alveolar/physiology
- Macrophages, Alveolar/transplantation
- Mice
- Mice, Inbred BALB C
- Microscopy, Fluorescence
- Ovalbumin/immunology
- Ovalbumin/toxicity
- Synchrotrons
- Tomography, X-Ray Computed/instrumentation
- Tomography, X-Ray Computed/methods
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Affiliation(s)
- Christian Dullin
- Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Robert Koch Strasse 40, 37075 Göttingen, Germany
| | | | - Emanuel Larsson
- Elettra Sincrotrone Trieste, Strada Statale 14, km 163.5 in AREA Science Park, 34149 Basovizza (Trieste), Italy
- Department of Architecture and Engineering, University of Trieste, Trieste, Italy
- Department of Physics, Chemistry and Biology, Linköping University, SE-581 83 Linkoeping, Sweden
| | - Sara Mohammadi
- Elettra Sincrotrone Trieste, Strada Statale 14, km 163.5 in AREA Science Park, 34149 Basovizza (Trieste), Italy
| | - Martin Krenkel
- Institute for X-ray Physics, University of Göttingen, Göttingen, Germany
| | - Chiara Garrovo
- Institute for Maternal and Child Health, IRCCS Burlo Garofolo, Trieste, Italy
| | - Stefania Biffi
- Institute for Maternal and Child Health, IRCCS Burlo Garofolo, Trieste, Italy
| | - Andrea Lorenzon
- Cluster in Biomedicine, AREA Science Park Basovizza, Trieste, Italy
| | - Andrea Markus
- Department of Haematology and Medical Oncology, University Medical Center Göttingen, Robert Koch Strasse 40, 37075 Göttingen, Germany
| | - Joanna Napp
- Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Robert Koch Strasse 40, 37075 Göttingen, Germany
- Department of Haematology and Medical Oncology, University Medical Center Göttingen, Robert Koch Strasse 40, 37075 Göttingen, Germany
- Molecular Biology of Neuronal Signals, Max Planck Institute for Experimental Medicine, Hermann-Rein-Strasse 3, 37075 Göttingen, Germany
| | - Tim Salditt
- Institute for X-ray Physics, University of Göttingen, Göttingen, Germany
| | - Agostino Accardo
- Department of Architecture and Engineering, University of Trieste, Trieste, Italy
| | - Frauke Alves
- Institute for Diagnostic and Interventional Radiology, University Medical Center Göttingen, Robert Koch Strasse 40, 37075 Göttingen, Germany
- Department of Haematology and Medical Oncology, University Medical Center Göttingen, Robert Koch Strasse 40, 37075 Göttingen, Germany
- Molecular Biology of Neuronal Signals, Max Planck Institute for Experimental Medicine, Hermann-Rein-Strasse 3, 37075 Göttingen, Germany
| | - Giuliana Tromba
- Elettra Sincrotrone Trieste, Strada Statale 14, km 163.5 in AREA Science Park, 34149 Basovizza (Trieste), Italy
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