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Li Z, Wei J, He W, Cao X, Zhou X, Tian Q. Effect of plant-soil system on the restoration of community stability after wildfire in the northeast margin of Qinghai-Tibet plateau. Sci Rep 2024; 14:10706. [PMID: 38729979 PMCID: PMC11087542 DOI: 10.1038/s41598-024-61621-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2024] [Accepted: 05/07/2024] [Indexed: 05/12/2024] Open
Abstract
Wildfires, as an environmental filter, are pivotal ecological disturbances that reshape plant communities and soil dynamics, playing a crucial role in regulating biogeographic patterns and ecosystem services. In this study, we aim to explore the effects of wildfires on forest ecosystems, specifically focusing on the plant-soil feedback mechanisms within the northeastern margin of the Qinghai-Tibet Plateau (QTP). Utilizing Partial Least Squares Path Modeling (PLS-PM), we investigated the interrelationships among soil physicochemical properties, enzyme activities, species diversity, and community stability at varying post-fire recovery stages (5, 15, and 23 years). Results indicated that in the early recovery stages, rapid changes in soil properties such as decreased pH (p < 0.001) and increased nutrient availability facilitate the emergence of early successional species with high resource utilization traits. As the ecosystem evolved toward a climax community, the soil and vegetation exhibit increased stability. Furthermore, soil enzyme activities displayed dynamic patterns that corresponded with changes in soil nutrient content, directly influencing the regeneration and diversity of plant communities. Importantly, our study documented a transition in the influence of soil properties on community stability from direct positive effects in initial recovery phases to negative impacts in later stages, while indirect benefits accrue through increased species diversity and enzyme activity. Vegetation composition and structure changed dynamically with recovery time during community succession. Plant nutrient absorption and accumulation affected nutrient dynamics in the soil, influencing plant regeneration, distribution, and diversity. Our results underscore the complex interactions between soil and vegetation that drive the recovery dynamics post-wildfire, highlighting the resilience of forest ecosystems to fire disturbances. This study contributes to the understanding of post-fire recovery processes and offers valuable insights for the management and restoration of fire-affected forest ecosystems.
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Affiliation(s)
- Zizhen Li
- College of Forestry, Gansu Agricultural University, Lanzhou, China
| | - Jia Wei
- Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China
| | - Wanpeng He
- College of Forestry, Gansu Agricultural University, Lanzhou, China
| | - Xueping Cao
- College of Forestry, Gansu Agricultural University, Lanzhou, China
| | - Xiaolei Zhou
- College of Forestry, Gansu Agricultural University, Lanzhou, China.
| | - Qing Tian
- Gansu Academy of Agricultural Sciences, Lanzhou, China.
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2
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Delory BM, Callaway RM, Semchenko M. A trait-based framework linking the soil metabolome to plant-soil feedbacks. THE NEW PHYTOLOGIST 2024; 241:1910-1921. [PMID: 38124274 DOI: 10.1111/nph.19490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Accepted: 11/30/2023] [Indexed: 12/23/2023]
Abstract
By modifying the biotic and abiotic properties of the soil, plants create soil legacies that can affect vegetation dynamics through plant-soil feedbacks (PSF). PSF are generally attributed to reciprocal effects of plants and soil biota, but these interactions can also drive changes in the identity, diversity and abundance of soil metabolites, leading to more or less persistent soil chemical legacies whose role in mediating PSF has rarely been considered. These chemical legacies may interact with microbial or nutrient legacies to affect species coexistence. Given the ecological importance of chemical interactions between plants and other organisms, a better understanding of soil chemical legacies is needed in community ecology. In this Viewpoint, we aim to: highlight the importance of belowground chemical interactions for PSF; define and integrate soil chemical legacies into PSF research by clarifying how the soil metabolome can contribute to PSF; discuss how functional traits can help predict these plant-soil interactions; propose an experimental approach to quantify plant responses to the soil solution metabolome; and describe a testable framework relying on root economics and seed dispersal traits to predict how plant species affect the soil metabolome and how they could respond to soil chemical legacies.
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Affiliation(s)
- Benjamin M Delory
- Institute of Ecology, Leuphana University of Lüneburg, Lüneburg, 21335, Germany
- Copernicus Institute of Sustainable Development, Utrecht University, Utrecht, 3584 CB, the Netherlands
| | - Ragan M Callaway
- Division of Biological Sciences and Institute on Ecosystems, University of Montana, Missoula, MT, 59812, USA
| | - Marina Semchenko
- Institute of Ecology and Earth Sciences, University of Tartu, Liivi 2, 50409, Tartu, Estonia
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3
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Kushwaha P, Soto Velázquez AL, McMahan C, Neilson JW. Field to Greenhouse: How Stable Is the Soil Microbiome after Removal from the Field? Microorganisms 2024; 12:110. [PMID: 38257936 PMCID: PMC10818785 DOI: 10.3390/microorganisms12010110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Revised: 12/29/2023] [Accepted: 01/03/2024] [Indexed: 01/24/2024] Open
Abstract
Plant-soil feedback (PSF) processes impact plant productivity and ecosystem function, but they are poorly understood because PSFs vary significantly with plant and soil type, plant growth stage, and environmental conditions. Controlled greenhouse studies are essential to unravel the mechanisms associating PSFs with plant productivity; however, successful implementation of these controlled experiments is constrained by our understanding of the persistence of the soil microbiome during the transition from field to greenhouse. This study evaluates the preservation potential of a field soil microbiome when stored in the laboratory under field temperature and moisture levels. Soil microbial diversity, taxonomic composition, and functional potential were evaluated via amplicon sequencing at the start of storage (W0), week 3 (W3), week 6 (W6), and week 9 (W9) to determine the effect of storage time on soil microbiome integrity. Though microbial richness remained stable, Shannon diversity indices decreased significantly at W6 for bacteria/archaea and W3 for fungi. Bacterial/archaeal community composition also remained stable, whereas the fungal community changed significantly during the first 3 weeks. Functional predictions revealed increased capacity for chemoheterotrophy for bacteria/archaea and decreased relative proportions of arbuscular mycorrhizal and ectomycorrhizal fungi. We show that preservation of the field soil microbiome must be a fundamental component of experimental design. Either greenhouse experiments should be initiated within 3 weeks of field soil collection, or a preliminary incubation study should be conducted to determine the time and storage conditions required to sustain the integrity of the specific field soil microbiome being studied.
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Affiliation(s)
- Priyanka Kushwaha
- Department of Environmental Science, The University of Arizona, Tucson, AZ 85721, USA; (P.K.); (A.L.S.V.)
| | - Ana L. Soto Velázquez
- Department of Environmental Science, The University of Arizona, Tucson, AZ 85721, USA; (P.K.); (A.L.S.V.)
| | - Colleen McMahan
- USDA Agricultural Research Service, Western Regional Research Center, Albany, CA 94710, USA;
| | - Julia W. Neilson
- Department of Environmental Science, The University of Arizona, Tucson, AZ 85721, USA; (P.K.); (A.L.S.V.)
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4
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Aaronson JK, Kulmatiski A, Forero LE, Grenzer J, Norton JM. Are Plant-Soil Feedbacks Caused by Many Weak Microbial Interactions? BIOLOGY 2023; 12:1374. [PMID: 37997973 PMCID: PMC10669423 DOI: 10.3390/biology12111374] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Accepted: 10/26/2023] [Indexed: 11/25/2023]
Abstract
We used high-throughput sequencing and multivariate analyses to describe soil microbial community composition in two four-year field plant-soil feedback (PSF) experiments in Minnesota, USA and Jena, Germany. In descending order of variation explained, microbial community composition differed between the two study sites, among years, between bulk and rhizosphere soils, and among rhizosphere soils cultivated by different plant species. To try to identify soil organisms or communities that may cause PSF, we correlated plant growth responses with the microbial community composition associated with different plants. We found that plant biomass was correlated with values on two multivariate axes. These multivariate axes weighted dozens of soil organisms, suggesting that PSF was not caused by individual pathogens or symbionts but instead was caused by 'many weak' plant-microbe interactions. Taken together, the results suggest that PSFs result from complex interactions that occur within the context of a much larger soil microbial community whose composition is determined by factors associated with 'site' or year, such as soil pH, soil type, and weather. The results suggest that PSFs may be highly variable and difficult to reproduce because they result from complex interactions that occur in the context of a larger soil microbial community.
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Affiliation(s)
- Julia K. Aaronson
- Wildland Resources and the Ecology Center, Utah State University, Logan, UT 84322, USA; (J.K.A.); (L.E.F.); (J.G.)
| | - Andrew Kulmatiski
- Wildland Resources and the Ecology Center, Utah State University, Logan, UT 84322, USA; (J.K.A.); (L.E.F.); (J.G.)
| | - Leslie E. Forero
- Wildland Resources and the Ecology Center, Utah State University, Logan, UT 84322, USA; (J.K.A.); (L.E.F.); (J.G.)
| | - Josephine Grenzer
- Wildland Resources and the Ecology Center, Utah State University, Logan, UT 84322, USA; (J.K.A.); (L.E.F.); (J.G.)
| | - Jeanette M. Norton
- Plants, Soils and Climate Department and the Ecology Center, Utah State University, Logan, UT 84322, USA;
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5
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Afzal MR, Naz M, Ashraf W, Du D. The Legacy of Plant Invasion: Impacts on Soil Nitrification and Management Implications. PLANTS (BASEL, SWITZERLAND) 2023; 12:2980. [PMID: 37631191 PMCID: PMC10458916 DOI: 10.3390/plants12162980] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2023] [Revised: 08/14/2023] [Accepted: 08/16/2023] [Indexed: 08/27/2023]
Abstract
Plant invasions can have long-lasting impacts on soil nitrification, which plays a critical role in nutrient cycling and plant growth. This review examines the legacy effects of plant invasion on soil nitrification, focusing on the underlying mechanisms, context dependence, and implications for management. We synthesize literature on the positive, negative and neutral legacy effects of plant invasion on soil nitrification, highlighting the complexity of these effects and the need for further research to fully understand them. Positive legacy effects include increased soil microbial biomass or activity, potentially enhancing nutrient availability for plants. However, negative legacy effects, like reduced nitrifier abundance, can result in decreased soil nitrification rates and nutrient availability. In some cases, changes to nitrification during active invasion appear transitory after the removal of invasive plants, indicating neutral short-term legacies. We discuss the context dependence of legacy effects considering factors, including location, specific invasive plant species, and other environmental conditions. Furthermore, we discuss the implications of these legacy effects for management and restoration strategies, such as the removal or control of invasive plants, and potential approaches for restoring ecosystems with legacy effects on soil nitrification. Finally, we highlight future research directions, including further investigation into the mechanisms and context dependence of legacy effects, and the role of plant-microbe interactions. Overall, this review provides insights into the legacy effects of plant invasion on soil nitrification and their implications for ecosystems.
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Affiliation(s)
- Muhammad Rahil Afzal
- Institute of Environment and Ecology, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, China;
| | - Misbah Naz
- Institute of Environment and Ecology, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, China;
| | - Waqas Ashraf
- Soil and Water Testing Laboratory for Research, Ayub Agricultural Research Institute Faisalabad, Punjab 38850, Pakistan;
| | - Daolin Du
- Institute of Environment and Ecology, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, China;
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Xi N, McCarthy-Neumann S, Feng J, Wu H, Wang W, Semchenko M. Light availability and plant shade tolerance modify plant-microbial interactions and feedbacks in subtropical trees. THE NEW PHYTOLOGIST 2023; 238:393-404. [PMID: 36647239 DOI: 10.1111/nph.18737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2022] [Accepted: 01/08/2023] [Indexed: 06/17/2023]
Abstract
Plant-soil feedbacks (PSFs) are an important mechanism of species coexistence in forest communities. However, evidence remains limited for how light availability regulates PSFs in species with different shade tolerance via changes in plant-microbial interactions. Here we tested in a glasshouse experiment how PSFs changed as a function of light availability and tree shade tolerance. Soil bacterial and fungal communities were profiled using the 16S rRNA and ITS2 gene sequencing, respectively. Under low light, individual PSFs were positively related to shade tolerance, while the least shade-tolerant species produced the most positive PSFs under high light. Pairwise PSFs between species with contrasting shade tolerance were strongly positive under high light but negative under low light, thereby promoting the dominance of less shade-tolerant species in forest gaps and species coexistence under closed canopy, respectively. Under high light, PSFs were related to soil microbial composition and diversity, with the relative abundance of arbuscular mycorrhizal fungi being the primary driver of PSFs. Under low light, none of soil microbial properties were significantly related to PSFs. These findings indicate PSFs and plant shade tolerance interact to promote species coexistence and improve our understanding of how soil microbes contribute to variation in PSFs.
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Affiliation(s)
- Nianxun Xi
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Ministry of Education, College of Forestry, Hainan University, Haikou, 570228, China
- State Key Laboratory of Biocontrol and School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, China
| | - Sarah McCarthy-Neumann
- Department of Forestry, Michigan State University, East Lansing, MI, 48824, USA
- Department of Agricultural and Environmental Sciences, Tennessee State University, Nashville, TN, 37209, USA
| | - Jiayi Feng
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, and Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Xingke Road 723, Guangzhou, 510650, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Haibin Road 1119, Nansha, Guangzhou, 511458, China
| | - Hangyu Wu
- State Key Laboratory of Biocontrol and School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, China
| | - Weitao Wang
- State Key Laboratory of Biocontrol and School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, China
| | - Marina Semchenko
- Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, 51005, Tartu, Estonia
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de Vries F, Lau J, Hawkes C, Semchenko M. Plant-soil feedback under drought: does history shape the future? Trends Ecol Evol 2023:S0169-5347(23)00054-X. [PMID: 36973124 DOI: 10.1016/j.tree.2023.03.001] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Revised: 03/02/2023] [Accepted: 03/03/2023] [Indexed: 03/29/2023]
Abstract
Plant-soil feedback (PSF) is widely recognised as a driver of plant community composition, but understanding of its response to drought remains in its infancy. Here, we provide a conceptual framework for the role of drought in PSF, considering plant traits, drought severity, and historical precipitation over ecological and evolutionary timescales. Comparing experimental studies where plants and microbes do or do not share a drought history (through co-sourcing or conditioning), we hypothesise that plants and microbes with a shared drought history experience more positive PSF under subsequent drought. To reflect real-world responses to drought, future studies need to explicitly include plant-microbial co-occurrence and potential co-adaptation and consider the precipitation history experienced by both plants and microbes.
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Affiliation(s)
- Franciska de Vries
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands.
| | - Jennifer Lau
- Department of Biology and Environmental Resilience Institute, Indiana University, IN, USA
| | - Christine Hawkes
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, USA
| | - Marina Semchenko
- Institute of Ecology and Earth Sciences, University of Tartu, Liivi 2, 50409 Tartu, Estonia
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8
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Rembelski M, Fraterrigo J. Drought reduces invasive grass performance by disrupting plant-microbe interactions that enhance plant nitrogen supply. Oecologia 2023; 201:549-564. [PMID: 36598562 DOI: 10.1007/s00442-022-05307-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2022] [Accepted: 12/16/2022] [Indexed: 01/05/2023]
Abstract
Non-native invasive plants can promote their dominance in novel ecosystems by accelerating soil nutrient cycling via interactions with decomposer microbes. Changes in abiotic conditions associated with frequent or prolonged drought may disrupt these interactions, but the effects of disruption on invasive plant performance and the underpinning mechanisms are poorly understood. Here, we used rainout shelters in an experimental field setting to test the hypothesis that drought reduces invasive plant performance by reducing microbial metabolic activity, resulting in decreased nitrogen flow to plants. We imposed growing season drought on populations of the exotic grass Microstegium vimineum, a widespread invasive plant in eastern deciduous forests, and quantified effects on aboveground and belowground biomass, and carbon (C) and nitrogen (N) cycling among plants, decomposers, and soil. Drought resulted in a 24% decrease in soil respiration, a 16% decrease in phenol oxidase enzyme activity, a 12% decrease in dissolved organic N concentration, and a decrease in the C:N ratio of particulate organic matter, suggesting reduced microbial metabolic activity and nutrient mining of soil organic matter. Drought also reduced aboveground Microstegium biomass 33% and increased Microstegium leaf C:N ratio, consistent with a decline in plant N uptake. We conclude that drought can reduce the performance of existing invasive species populations by suppressing plant-microbe interactions that increase nitrogen supply to plants, which may have consequences for the persistence of invasive plants under hydrologic change.
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Affiliation(s)
- Mara Rembelski
- Department of Natural Resources and Environmental Sciences, University of Illinois, Urbana, IL, 61801, USA
| | - Jennifer Fraterrigo
- Department of Natural Resources and Environmental Sciences, University of Illinois, Urbana, IL, 61801, USA. .,Program in Ecology, Evolution and Conservation Biology, University of Illinois, Urbana, IL, 61801, USA.
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9
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Duell EB, Bever JD, Wilson GWT. Role of plant relatedness in plant-soil feedback dynamics of sympatric Asclepias species. Ecol Evol 2023; 13:e9763. [PMID: 36713479 PMCID: PMC9873585 DOI: 10.1002/ece3.9763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Revised: 12/10/2022] [Accepted: 01/06/2023] [Indexed: 01/26/2023] Open
Abstract
Plants affect associated biotic and abiotic edaphic factors, with reciprocal feedbacks from soil characteristics affecting plants. These two-way interactions between plants and soils are collectively known as plant-soil feedbacks (PSFs). The role of phylogenetic relatedness and evolutionary histories have recently emerged as a potential driver of PSFs, although the strength and direction of feedbacks among sympatric congeners are not well-understood. We examined plant-soil feedback responses of Asclepias syriaca, a common clonal milkweed species, with several sympatric congeners across a gradient of increasing phylogenetic distances (A. tuberosa, A. viridis, A. sullivantii, and A. verticillata, respectively). Plant-soil feedbacks were measured through productivity and colonization by arbuscular mycorrhizal (AM) fungi. Asclepias syriaca produced less biomass in soils conditioned by the most phylogenetically distant species (A. verticillata), relative to conspecific-conditioned soils. Similarly, arbuscular mycorrhizal (AM) fungal colonization of A. syriaca roots was reduced when grown in soils conditioned by A. verticillata, compared with colonization in plants grown in soil conditioned by any of the other three Asclepias species, indicating mycorrhizal associations are a potential mechanism of observed positive PSFs. This display of differences between the most phylogenetically distant, but not close or intermediate, paring(s) suggests a potential phylogenetic threshold, although other exogenous factors cannot be ruled out. Overall, these results highlight the potential role of phylogenetic distance in influencing positive PSFs through mutualists. The role of phylogenetic relatedness and evolutionary histories have recently emerged as a potential driver of plant-soil feedbacks (PSFs), although the strength and direction of feedbacks among sympatric congeners are not well-understood. Congeneric, sympatric milkweeds typically generated positive PSFs in terms of productivity and AM fungal colonization, suggesting the low likelihood of coexistence among tested pairs, with a strength of feedback increasing as the phylogenetic distance increases.
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Affiliation(s)
- Eric B. Duell
- Kansas Biological Survey & Center for Ecological ResearchLawrenceKansasUSA
| | - James D. Bever
- Kansas Biological Survey & Center for Ecological ResearchLawrenceKansasUSA,Department of Ecology & Evolutionary BiologyUniversity of KansasLawrenceKansasUSA
| | - Gail W. T. Wilson
- Department of Natural Resource Ecology & ManagementOklahoma State UniversityStillwaterOklahomaUSA
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He C, Han T, Liu C, Sun P, Liao D, Li X. Deciphering the effects of genotype and climatic factors on the performance, active ingredients and rhizosphere soil properties of Salvia miltiorrhiza. FRONTIERS IN PLANT SCIENCE 2023; 14:1110860. [PMID: 37152152 PMCID: PMC10157250 DOI: 10.3389/fpls.2023.1110860] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Accepted: 03/28/2023] [Indexed: 05/09/2023]
Abstract
Introduction Salvia miltiorrhiza Bunge is an important medicinal herb, which is widely cultivated in most parts of China. It has attracted considerable attention because of its pharmacological properties and potential health benefits. Methods We used a field experiment to determine the effects of different genotypes and climatic factors on the performance (plant biomass, morphological parameters), active ingredients, rhizosphere soil physicochemical properties and microbial composition of S. miltiorrhiza at five cultivation locations. Results The results showed that these parameters were significantly different in the six different genotypes of S. miltiorrhiza from five producing areas. Genotype and soil physicochemical properties were the main factors affecting the growth traits of S. miltiorrhiza, while genotype, climate and soil physicochemical properties were the main factors affecting the content of active components of S. miltiorrhiza. Microbial phospholipid fatty acid analysis showed that the biomass of Gram-positive and Gram-negative bacteria was affected by the genotypes of S. miltiorrhiza plants, while the biomass of arbuscular mycorrhizal fungi, fungi, Gram-positive and Gram-negative bacteria was affected by climate factors. Discussion Based on the main results, DS993 was the most suitable genotype for S. miltiorrhiza in the five producing areas from the perspective of comprehensive growth traits and medicinal components, while DS993 and DS2000 were suitable for planting in Shandong province from the perspective of origin. DS996 is not suitable for all of the above production areas. These results are helpful to understand the ecological adaptability of different genotypes of S. miltiorrhiza resources, and to select appropriate S. miltiorrhiza genotypes for specific planting areas, so as to maximize yield and quality.
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Affiliation(s)
| | | | | | | | | | - Xianen Li
- *Correspondence: Dengqun Liao, ; Xianen Li,
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11
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Lundell S, Batbaatar A, Carlyle CN, Lamb EG, Otfinowski R, Schellenberg MP, Bennett JA. Plant responses to soil biota depend on precipitation history, plant diversity, and productivity. Ecology 2022; 103:e3784. [PMID: 35672930 DOI: 10.1002/ecy.3784] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 04/18/2022] [Accepted: 05/05/2022] [Indexed: 12/13/2022]
Abstract
Soil biota are critical drivers of plant growth, population dynamics, and community structure and thus have wide-ranging effects on ecosystem function. Interactions between plants and soil biota are complex, however, and can depend on the diversity and productivity of the plant community and environmental conditions. Plant-soil biota interactions may be especially important during stressful periods, such as drought, when plants can gain great benefits from beneficial biota but may be susceptible to antagonists. How soil biota respond to drought is also important and can influence plant growth following drought and leave legacies that affect future plant responses to soil biota and further drought. To explore how drought legacies and plant community context influence plant growth responses to soil biota and further drought, we collected soils from 12 grasslands varying in plant diversity and productivity where precipitation was experimentally reduced. We used these soils as inoculum in a growth chamber experiment testing how precipitation history (ambient or reduced) and soil biota (live or sterile soil inoculum) mediate plant growth and drought responses within an experimental plant community. We also tested whether these responses differed with the diversity and productivity of the community where the soil was collected. Plant growth responses to soil biota were positive when inoculated with soils from less diverse and productive plant communities and became negative as the diversity and productivity of the conditioning community increased. At low diversity, however, positive soil biota effects on plant growth were eliminated if precipitation had been reduced in the field, suggesting that diversity loss may heighten climate change sensitivity. Differences among species within the experimental community in their responses to soil biota and drought suggest that species benefitting from less drought sensitive soil biota may be able to compensate for some of this loss of productivity. Regardless of the plant species and soil origin, further drought eliminated any effects of soil biota on plant growth. Consequently, soil biota may be unable to buffer the effects of drought on primary productivity or other ecosystem functions as extreme events increase in frequency.
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Affiliation(s)
- Seth Lundell
- Department of Plant Sciences, University of Saskatchewan, Saskatoon, Canada
| | - Amgaa Batbaatar
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada.,Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada
| | - Cameron N Carlyle
- Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada
| | - Eric G Lamb
- Department of Plant Sciences, University of Saskatchewan, Saskatoon, Canada
| | - Rafael Otfinowski
- Department of Biology, The University of Winnipeg, Winnipeg, Manitoba, Canada
| | - Michael P Schellenberg
- Swift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, Saskatchewan, Canada
| | - Jonathan A Bennett
- Department of Plant Sciences, University of Saskatchewan, Saskatoon, Canada
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12
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Lozano YM, Aguilar-Trigueros CA, Ospina JM, Rillig MC. Drought legacy effects on root morphological traits and plant biomass via soil biota feedback. THE NEW PHYTOLOGIST 2022; 236:222-234. [PMID: 35719096 DOI: 10.1111/nph.18327] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2022] [Accepted: 06/14/2022] [Indexed: 05/22/2023]
Abstract
Drought causes soil feedback effects on plant performance. However, how the linkages between conditioned soil biota and root traits contribute to explain plant-soil feedback (PSF) as a function of drought is unknown. We utilized soil inoculum from a conditioning experiment where grassland species grew under well-watered and drought conditions, and their soil fungi were analyzed. Under well-watered conditions, we grew 21 grassland species with those inocula from either conspecific or heterospecific soils. At harvest, plant biomass and root traits were measured. Negative PSF (higher biomass in heterospecific than in conspecific soils) was predominant, and favored in drought-conditioned soils. Previous drought affected the relationship between root traits and fungal groups. Specific root surface area (SRSA) was higher in heterospecific than in conspecific droughted soils and was linked to an increase in saprotroph richness. Overall, root diameter was higher in conspecific soils and was linked to mutualist and pathogen composition, whereas the decrease of root : shoot in heterospecific soils was linked to pathogenic fungi. Drought legacy affects biomass and root morphological traits via conditioned soil biota, even after the drought conditions have disappeared. This provides new insights into the role that soil biota have modulating PSF responses to drought.
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Affiliation(s)
- Yudi M Lozano
- Institute of Biology, Plant Ecology, Freie Universität Berlin, D-14195, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), D-14195, Berlin, Germany
| | - Carlos A Aguilar-Trigueros
- Institute of Biology, Plant Ecology, Freie Universität Berlin, D-14195, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), D-14195, Berlin, Germany
| | - Jenny M Ospina
- Institute of Biology, Plant Ecology, Freie Universität Berlin, D-14195, Berlin, Germany
| | - Matthias C Rillig
- Institute of Biology, Plant Ecology, Freie Universität Berlin, D-14195, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), D-14195, Berlin, Germany
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Gebauer L, Breitkreuz C, Heintz-Buschart A, Reitz T, Buscot F, Tarkka M, Bouffaud ML. Water Deficit History Selects Plant Beneficial Soil Bacteria Differently Under Conventional and Organic Farming. Front Microbiol 2022; 13:824437. [PMID: 35770171 PMCID: PMC9234553 DOI: 10.3389/fmicb.2022.824437] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Accepted: 04/29/2022] [Indexed: 01/04/2023] Open
Abstract
Water deficit tolerance is critical for plant fitness and survival, especially when successive drought events happen. Specific soil microorganisms are however able to improve plant tolerance to stresses, such as those displaying a 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity. Microorganisms adapted to dry conditions can be selected by plants over time because of properties such as sporulation, substrate preference, or cell-wall thickness. However, the complexity and interconnection between abiotic factors, like drought or soil management, and biotic factors, like plant species identity, make it difficult to elucidate the general selection processes of such microorganisms. Using a pot experiment in which wheat and barley were grown on conventional and organic farming soils, we determined the effect of water deficit history on soil microorganisms by comparing single and successive events of water limitation. The analysis showed that water deficit strongly impacts the composition of both the total microbial community (16S rRNA genes) and one of ACC deaminase-positive (acdS+) microorganisms in the rhizosphere. In contrast, successive dry conditions moderately influence the abundance and diversity of both communities compared to a single dry event. We revealed interactive effects of the farming soil type and the water deficit conditioning treatment. Indeed, possibly due to better nutrient status, plants grown on soils from conventional farming showed higher growth and were able to select more adapted microbial taxa. Some of them are already known for their plant-beneficial properties like the Actinobacteria Streptomyces, but interestingly, some Proteobacteria were also enriched after a water deficit history under conventional farming. Our approach allowed us to identify key microbial taxa promoting drought adaptation of cereals, thus improving our understanding of drought effects on plant-microbe interactions.
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Affiliation(s)
- Lucie Gebauer
- Helmholtz Centre for Environmental Research, Halle, Germany
| | | | - Anna Heintz-Buschart
- Helmholtz Centre for Environmental Research, Halle, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Biosystems Data Analysis Group, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands
| | - Thomas Reitz
- Helmholtz Centre for Environmental Research, Halle, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - François Buscot
- Helmholtz Centre for Environmental Research, Halle, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - Mika Tarkka
- Helmholtz Centre for Environmental Research, Halle, Germany
| | - Marie-Lara Bouffaud
- Helmholtz Centre for Environmental Research, Halle, Germany
- *Correspondence: Marie-Lara Bouffaud
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14
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Zhang M, Li X, Xing F, Li Z, Liu X, Li Y. Soil Microbial Legacy Overrides the Responses of a Dominant Grass and Nitrogen-Cycling Functional Microbes in Grassland Soil to Nitrogen Addition. PLANTS (BASEL, SWITZERLAND) 2022; 11:1305. [PMID: 35631730 PMCID: PMC9145027 DOI: 10.3390/plants11101305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 05/03/2022] [Accepted: 05/12/2022] [Indexed: 06/15/2023]
Abstract
Both atmospheric nitrogen (N) deposition and soil microbial legacy (SML) can affect plant performance, the activity of soil N-cycling functional microbes and the relative abundance of N-cycling functional genes (NCFGs). In the grassland vegetation successional process, how the interaction of SML and N deposition affects the performance of dominant grass and NCFGs remains unclear. Therefore, we planted Leymus chinensis, a dominant grass in the Songnen grassland, in the soil taken from the early, medium, late, and stable successional stages. We subjected the plants to soil sterilization and N addition treatments and measured the plant traits and NCFG abundances (i.e., nifH, AOB amoA, nirS, and nirK). Our results showed the biomass and ramet number of L. chinensis in sterilized soil were significantly higher than those in non-sterilized soil, indicating that SML negatively affects the growth of L. chinensis. However, N addition increased the plant biomass and the AOB amoA gene abundance only in sterilized soils, implying that SML overrode the N addition effects because SML buffered the effects of increasing soil N availability on NCFGs. Therefore, we emphasize the potential role of SML in assessing the effects of N deposition on dominant plant performance and NCFGs in the grassland vegetation succession.
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Affiliation(s)
- Minghui Zhang
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (M.Z.); (X.L.); (Z.L.); (X.L.); (Y.L.)
- Jilin Provincial Key Laboratory of Ecological Restoration and Ecosystem Management, Northeast Normal University, Changchun 130024, China
| | - Xueli Li
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (M.Z.); (X.L.); (Z.L.); (X.L.); (Y.L.)
- Jilin Provincial Key Laboratory of Ecological Restoration and Ecosystem Management, Northeast Normal University, Changchun 130024, China
| | - Fu Xing
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (M.Z.); (X.L.); (Z.L.); (X.L.); (Y.L.)
- Jilin Provincial Key Laboratory of Ecological Restoration and Ecosystem Management, Northeast Normal University, Changchun 130024, China
| | - Zhuo Li
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (M.Z.); (X.L.); (Z.L.); (X.L.); (Y.L.)
- Jilin Provincial Key Laboratory of Ecological Restoration and Ecosystem Management, Northeast Normal University, Changchun 130024, China
| | - Xiaowei Liu
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (M.Z.); (X.L.); (Z.L.); (X.L.); (Y.L.)
- Jilin Provincial Key Laboratory of Ecological Restoration and Ecosystem Management, Northeast Normal University, Changchun 130024, China
| | - Yanan Li
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (M.Z.); (X.L.); (Z.L.); (X.L.); (Y.L.)
- Jilin Provincial Key Laboratory of Ecological Restoration and Ecosystem Management, Northeast Normal University, Changchun 130024, China
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15
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Xi N, Crawford KM, De Long JR. Plant landscape abundance and soil fungi modulate drought effects on plant–soil feedbacks. OIKOS 2022. [DOI: 10.1111/oik.08836] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Nianxun Xi
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Ministry of Education, College of Forestry, Hainan Univ. Haikou China
- School of Ecology, Sun Yat‐sen Univ. Guangzhou China
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16
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Changes in precipitation patterns can destabilize plant species coexistence via changes in plant-soil feedback. Nat Ecol Evol 2022; 6:546-554. [PMID: 35347257 DOI: 10.1038/s41559-022-01700-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Accepted: 02/10/2022] [Indexed: 01/04/2023]
Abstract
Climate change can alter species coexistence through changes in biotic interactions. By describing reciprocal interactions between plants and soil microbes, plant-soil feedback (PSF) has emerged as a powerful framework for predicting plant species coexistence and community dynamics, but little is known about how PSF will respond to changing climate conditions. Hence, the context dependency of PSF has recently gained attention. Water availability is a major driver of all biotic interactions, and it is expected that precipitation patterns will change with ongoing climate change. We tested how soil water content affects PSF by conducting a full factorial pairwise PSF experiment using eight plant species common to southeastern United States coastal prairies under three watering treatments. We found coexistence-stabilizing negative PSF at drier-than-average conditions shifted to coexistence-destabilizing positive PSF under wetter-than-average conditions. A simulation model parameterized with the experimental results supports the prediction that more positive PSF accelerates the erosion of diversity within communities while decreasing the predictability in plant community composition. Our results underline the importance of considering environmental context dependency of PSF in light of a rapidly changing climate.
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17
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Water shifts the balance of coexistence. Nat Ecol Evol 2022; 6:496-497. [PMID: 35347262 DOI: 10.1038/s41559-022-01725-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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18
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Walker JB, Rinehart S, Greenberg‐Pines G, White WK, DeSantiago R, Lipson DA, Long JD. Aboveground competition influences density‐dependent effects of cordgrass on sediment biogeochemistry. Ecol Evol 2022; 12:e8722. [PMID: 35356584 PMCID: PMC8939245 DOI: 10.1002/ece3.8722] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2021] [Revised: 02/08/2022] [Accepted: 02/22/2022] [Indexed: 11/06/2022] Open
Abstract
Interspecific interactions between plants influence plant phenotype, distribution, abundance, and community structure. Each of these can, in turn, impact sediment biogeochemistry. Although the population and community level impacts of these interactions have been extensively studied, less is known about their effect on sediment biogeochemistry. This is surprising given that many plants are categorized as foundation species that exert strong control on community structure. In southern California salt marshes, we used clipping experiments to manipulate aboveground neighbor presence to study interactions between two dominant plants, Pacific cordgrass (Spartina foliosa) and perennial pickleweed (Sarcocornia pacifica). We also measured how changes in cordgrass stem density influenced sediment biogeochemistry. Pickleweed suppressed cordgrass stem density but had no effect on aboveground biomass. For every cordgrass stem lost per square meter, porewater ammonium increased 0.3–1.0 µM. Thus, aboveground competition with pickleweed weakened the effects of cordgrass on sediment biogeochemistry. Predictions about plant–soil feedbacks, especially under future climate scenarios, will be improved when plant–plant interactions are considered, particularly those containing dominant and foundation species.
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Affiliation(s)
- Janet B. Walker
- Department of Biology San Diego State University San Diego California USA
- Coastal and Marine Institute San Diego State University San Diego California USA
- Southern California Coastal Water Research Project Costa Mesa California USA
| | - Shelby Rinehart
- Department of Biology San Diego State University San Diego California USA
- Coastal and Marine Institute San Diego State University San Diego California USA
- Department of Biological Sciences University of Alabama Tuscaloosa Alabama USA
| | - Gabriel Greenberg‐Pines
- Department of Biology San Diego State University San Diego California USA
- Coastal and Marine Institute San Diego State University San Diego California USA
- Department of Zoology and Biodiversity Research Centre University of British Columbia Vancouver BC Canada
| | - Wendi K. White
- Department of Biology San Diego State University San Diego California USA
- Coastal and Marine Institute San Diego State University San Diego California USA
- Department of Biology University of Massachusetts Boston Boston Massachusetts USA
| | - Ric DeSantiago
- Department of Biology San Diego State University San Diego California USA
- Coastal and Marine Institute San Diego State University San Diego California USA
- Department of Environmental Science and Policy University of California Davis Davis California USA
| | - David A. Lipson
- Department of Biology San Diego State University San Diego California USA
| | - Jeremy D. Long
- Department of Biology San Diego State University San Diego California USA
- Coastal and Marine Institute San Diego State University San Diego California USA
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19
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Plant-soil feedback of the invasive Sorghum halepense on Hainan island, China. Biol Invasions 2022. [DOI: 10.1007/s10530-022-02736-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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20
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Huang K, Kardol P, Yan X, Luo X, Guo H. Plant–soil biota interactions explain shifts in plant community composition under global change. Funct Ecol 2021. [DOI: 10.1111/1365-2435.13940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Kailing Huang
- College of Resources and Environmental Sciences Nanjing Agricultural University Nanjing China
| | - Paul Kardol
- Department of Forest Ecology and Management Swedish University of Agricultural Sciences Umeå Sweden
| | - Xuebin Yan
- College of Resources and Environmental Sciences Nanjing Agricultural University Nanjing China
| | - Xi Luo
- College of Resources and Environmental Sciences Nanjing Agricultural University Nanjing China
| | - Hui Guo
- College of Resources and Environmental Sciences Nanjing Agricultural University Nanjing China
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21
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Nuske SJ, Fajardo A, Nuñez MA, Pauchard A, Wardle DA, Nilsson MC, Kardol P, Smith JE, Peltzer DA, Moyano J, Gundale MJ. Soil biotic and abiotic effects on seedling growth exhibit context-dependent interactions: evidence from a multi-country experiment on Pinus contorta invasion. THE NEW PHYTOLOGIST 2021; 232:303-317. [PMID: 33966267 DOI: 10.1111/nph.17449] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2020] [Accepted: 05/04/2021] [Indexed: 06/12/2023]
Abstract
The success of invasive plants is influenced by many interacting factors, but evaluating multiple possible mechanisms of invasion success and elucidating the relative importance of abiotic and biotic drivers is challenging, and therefore rarely achieved. We used live, sterile or inoculated soil from different soil origins (native range and introduced range plantation; and invaded plots spanning three different countries) in a fully factorial design to simultaneously examine the influence of soil origin and soil abiotic and biotic factors on the growth of invasive Pinus contorta. Our results displayed significant context dependency in that certain soil abiotic conditions in the introduced ranges (soil nitrogen, phosphorus or carbon content) influenced responses to inoculation treatments. Our findings do not support the enemy release hypothesis or the enhanced mutualism hypothesis, as biota from native and plantation ranges promoted growth similarly. Instead, our results support the missed mutualism hypothesis, as biota from invasive ranges were the least beneficial for seedling growth. Our study provides a novel perspective on how variation in soil abiotic factors can influence plant-soil feedbacks for an invasive tree across broad biogeographical contexts.
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Affiliation(s)
- Susan J Nuske
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, 90183, Sweden
| | - Alex Fajardo
- Instituto de Investigación Interdisciplinario (I3), Universidad de Talca, Campus Lircay, Talca, 3460000, Chile
| | - Martin A Nuñez
- Grupo de Ecología de Invasiones, INIBIOMA-UNComa, CONICET, Bariloche, 8400, Argentina
- Department of Biology and Biochemistry, University of Houston, Houston, TX, 77204, USA
| | - Aníbal Pauchard
- Laboratorio de Invasiones Biológicas (LIB), Facultad de Ciencias Forestales, Universidad de Concepción, Concepción, Chile
- Institute of Ecology and Biodiversity (IEB), Santiago, Chile
| | - David A Wardle
- Asian School of the Environment, College of Science, Nanyong Technological University, Singapore, 639798, Singapore
| | - Marie-Charlotte Nilsson
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, 90183, Sweden
| | - Paul Kardol
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, 90183, Sweden
| | - Jane E Smith
- US Department of Agriculture, Forest Service, Pacific Northwest Research Station, Corvallis, OR, 97331, USA
| | - Duane A Peltzer
- Manaaki Whenua Landcare Research, Lincoln, 7608, New Zealand
| | - Jaime Moyano
- Grupo de Ecología de Invasiones, INIBIOMA-UNComa, CONICET, Bariloche, 8400, Argentina
| | - Michael J Gundale
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, 90183, Sweden
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22
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Persistence of plant-mediated microbial soil legacy effects in soil and inside roots. Nat Commun 2021; 12:5686. [PMID: 34584090 PMCID: PMC8478921 DOI: 10.1038/s41467-021-25971-z] [Citation(s) in RCA: 49] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Accepted: 08/25/2021] [Indexed: 01/04/2023] Open
Abstract
Plant-soil feedbacks are shaped by microbial legacies that plants leave in the soil. We tested the persistence of these legacies after subsequent colonization by the same or other plant species using 6 typical grassland plant species. Soil fungal legacies were detectable for months, but the current plant effect on fungi amplified in time. By contrast, in bacterial communities, legacies faded away rapidly and bacteria communities were influenced strongly by the current plant. However, both fungal and bacterial legacies were conserved inside the roots of the current plant species and their composition significantly correlated with plant growth. Hence, microbial soil legacies present at the time of plant establishment play a vital role in shaping plant growth even when these legacies have faded away in the soil due the growth of the current plant species. We conclude that soil microbiome legacies are reversible and versatile, but that they can create plant-soil feedbacks via altering the endophytic community acquired during early ontogeny. Legacies of past plant communities are likely to influence plant-soil interactions. Here, the authors report a reciprocal transplant experiment showing that soil microbial legacies shaped by previous plants persist for soil fungi and root endophytes but can be reversed by a next generation of plants for soil bacteria.
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23
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Allen WJ, Sapsford SJ, Dickie IA. Soil sample pooling generates no consistent inference bias: a meta-analysis of 71 plant-soil feedback experiments. THE NEW PHYTOLOGIST 2021; 231:1308-1315. [PMID: 33982798 DOI: 10.1111/nph.17455] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Accepted: 05/03/2021] [Indexed: 06/12/2023]
Abstract
There is current debate on how soil sample pooling affects the measurement of plant-soil feedbacks. Several studies have suggested that pooling soil samples among experimental units reduces variance and can bias estimates of plant-soil feedbacks. However, it is unclear whether pooling has resulted in systematic mismeasurement of plant-soil feedbacks in the literature. Using data from 71 experiments, we tested whether pairwise plant-soil feedback direction, magnitude and variance differed among soil pooling treatments. We also tested whether pooling has altered our understanding of abiotic and biotic drivers that influence pairwise plant-soil feedbacks. Pooling of soil samples among experimental units was used in 42% of examined experiments. Contrary to predictions, pooling did not affect mean pairwise plant-soil feedback effect size or within-experiment variance. Accounting for soil sample pooling also did not significantly alter our understanding of the drivers of pairwise plant-soil feedbacks. We conclude that there is no evidence that soil sample pooling systematically biases estimates of plant-soil feedback direction, magnitude, variance or drivers across many studies. Given the debate of whether to pool soil samples, researchers should be aware of potential criticisms and carefully consider how experimental design and soil pooling methods influence interpretation of experiments.
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Affiliation(s)
- Warwick J Allen
- Bio-Protection Research Centre, School of Biological Sciences, University of Canterbury, Christchurch, 8140, New Zealand
| | - Sarah J Sapsford
- School of Biological Sciences, University of Canterbury, Christchurch, 8140, New Zealand
| | - Ian A Dickie
- Bio-Protection Research Centre, School of Biological Sciences, University of Canterbury, Christchurch, 8140, New Zealand
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24
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Martorell C, MartÍnez-Blancas A, García-Meza D. Plant-soil feedbacks depend on drought stress, functional group, and evolutionary relatedness in a semiarid grassland. Ecology 2021; 102:e03499. [PMID: 34314034 DOI: 10.1002/ecy.3499] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Revised: 04/15/2021] [Accepted: 06/04/2021] [Indexed: 11/08/2022]
Abstract
Plant-soil feedback (PSF) occurs when plants change the biota and physicochemical properties of the soil, and these changes affect future survival or growth of plants. PSF depends on several factors such as plant functional attributes (e.g., life cycle or photosynthetic metabolism) and the environment. PSF often turn positive under dry conditions because soil biota confers drought tolerance. Conspecifics and close relatives share pathogens and consume similar resources, exerting negative PSF on each other. These ideas have mostly been tested under controlled conditions, while field studies remain scarce. To reevaluate these findings in nature, we analyzed plant-soil feedbacks over a drought-stress gradient in a phosphorus-limited semiarid grassland. We planted seedlings of 17 species in plots where community composition had been monitored for six years. To determine PSF intensity, we measured how seedling longevity was affected by previous occupancy of conspecifics and heterospecifics. The previous occupancy-survival relationship (OSR) was used as a proxy for PSF. Evidence for OSRs was found in one-third of the species pairs, with inconclusive evidence for the rest suggesting weak feedbacks. This is in line with the expectation that PSFs in the field are weaker than under controlled conditions. As expected, positive PSFs were more frequent as drought stress increased. The strongest OSRs were caused in dry plots by C4 perennial grasses, which had very positive OSRs on several C3 annual forbs, but negative effects on each other. Well-documented differences between these two functional groups may explain this result: C3 plants are more sensitive to drought, and thus may be favored by tolerance-conferring microbiota; in contrast, water-efficient C4 perennial grasses compete for phosphorus strongly, perhaps driving strong negative PSFs between them. Finally, close relatives had more negative OSRs on each other than on distant relatives as expected, although only in dry plots. This pattern was mostly due to the negative effects of closely related C4 grasses under dry conditions, and their positive effects on distantly related dicots. Our results highlight the importance of plant traits and of the environmental context in determining the direction and strength of PSFs under field conditions.
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Affiliation(s)
- Carlos Martorell
- Departamento de Ecología y Recursos Naturales, Facultad de Ciencias, Universidad Nacional Autónoma de México, Coyoacán, 04510, Ciudad de México, Mexico
| | - Alejandra MartÍnez-Blancas
- Departamento de Ecología y Recursos Naturales, Facultad de Ciencias, Universidad Nacional Autónoma de México, Coyoacán, 04510, Ciudad de México, Mexico.,Posgrado en Ciencias Biológicas, Universidad Nacional Autónoma de México, Avenida Universitaria 3000, Coyoacán, C.P. 04510, Ciudad de México, Mexico
| | - Diego García-Meza
- Departamento de Ecología y Recursos Naturales, Facultad de Ciencias, Universidad Nacional Autónoma de México, Coyoacán, 04510, Ciudad de México, Mexico
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25
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The temporal development of plant-soil feedback is contingent on competition and nutrient availability contexts. Oecologia 2021; 196:185-194. [PMID: 33847804 DOI: 10.1007/s00442-021-04919-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2021] [Accepted: 04/08/2021] [Indexed: 10/21/2022]
Abstract
Strength and direction of plant-soil feedback (PSF), the reciprocal interactions between plants and soil, can change over time and have distinct effects on different life stages. PSF and its temporal development can also be modified by external biotic and abiotic factors such as competition and resource availability, yet most PSF research is conducted in simple experimental settings without considering temporal changes. Here I have studied the effect of different competitive settings (intraspecific, interspecific, and no competition) and nutrient addition on the magnitude and direction of biomass-based PSF (performance in conspecific relative to heterospecific inoculum) across 46 grassland species, estimated at the 4th, 10th, and 13th month of the response phase. I also examined whether conspecific inoculum had a long-term effect on plant survival at the 36th month, and whether biomass-based PSF may predict survival-based PSF effects. PSF pooled across all treatments and time points was negative, but a significant overall temporal trend or differences among competitive settings were missing. PSF developed unimodally for interspecific competition across the three time points, whereas it declined gradually in case of intraspecific and no competition. Nutrient addition attenuated negative biomass-based PSF and eliminated negative effects of conspecific inoculum on survival. Interspecific differences in biomass-based PSF were related to survival-based PSF, but only after nutrient addition. This study demonstrates that PSF is dynamic and modulated by external abiotic and biotic factors. PSF research should consider the temporal dynamics of focal communities to properly estimate how PSF contributes to community changes, preferably directly in the field.
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26
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Wang M, Tang X, Sun X, Jia B, Xu H, Jiang S, Siemann E, Lu X. An invasive plant rapidly increased the similarity of soil fungal pathogen communities. ANNALS OF BOTANY 2021; 127:327-336. [PMID: 33159517 PMCID: PMC7872125 DOI: 10.1093/aob/mcaa191] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Accepted: 10/30/2020] [Indexed: 05/06/2023]
Abstract
BACKGROUND AND AIMS Plant invasions can change soil microbial communities and affect subsequent invasions directly or indirectly via foliar herbivory. It has been proposed that invaders promote uniform biotic communities that displace diverse, spatially variable communities (the biotic homogenization hypothesis), but this has not been experimentally tested for soil microbial communities, so the underlying mechanisms and dynamics are unclear. Here, we compared density-dependent impacts of the invasive plant Alternanthera philoxeroides and its native congener A. sessilis on soil fungal communities, and their feedback effects on plants and a foliar beetle. METHODS We conducted a plant-soil feedback (PSF) experiment and a laboratory bioassay to examine PSFs associated with the native and invasive plants and a beetle feeding on them. We also characterized the soil fungal community using high-throughput sequencing. KEY RESULTS We found locally differentiated soil fungal pathogen assemblages associated with high densities of the native plant A. sessilis but little variation in those associated with the invasive congener A. philoxeroides, regardless of plant density. In contrast, arbuscular mycorrhizal fungal assemblages associated with high densities of the invasive plant were more variable. Soil biota decreased plant shoot mass but their effect was weak for the invasive plant growing in native plant-conditioned soils. PSFs increased the larval biomass of a beetle reared on leaves of the native plant only. Moreover, PSFs on plant shoot and root mass and beetle mass were predicted by different pathogen taxa in a plant species-specific manner. CONCLUSION Our results suggest that plant invasions can rapidly increase the similarity of soil pathogen assemblages even at low plant densities, leading to taxonomically and functionally homogeneous soil communities that may limit negative soil effects on invasive plants.
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Affiliation(s)
- Meiling Wang
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Hubei, China
- School of Life Sciences, Central China Normal University, Hubei, China
| | - Xuefei Tang
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Hubei, China
- School of Life Sciences, Central China Normal University, Hubei, China
| | - Xiaoqiu Sun
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Hubei, China
- College of Plant Sciences & Technology, Huazhong Agricultural University, Hubei, China
| | - Bingbing Jia
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Hubei, China
- School of Life Sciences, Central China Normal University, Hubei, China
| | - Hao Xu
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Hubei, China
- College of Plant Sciences & Technology, Huazhong Agricultural University, Hubei, China
| | - Suai Jiang
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Hubei, China
- College of Plant Sciences & Technology, Huazhong Agricultural University, Hubei, China
| | - Evan Siemann
- Biosciences Department, Rice University, Houston, TX, USA
| | - Xinmin Lu
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Hubei, China
- College of Plant Sciences & Technology, Huazhong Agricultural University, Hubei, China
- For correspondence. E-mail
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27
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Johnson NC, Gibson KS. Understanding Multilevel Selection May Facilitate Management of Arbuscular Mycorrhizae in Sustainable Agroecosystems. FRONTIERS IN PLANT SCIENCE 2021; 11:627345. [PMID: 33574827 PMCID: PMC7870699 DOI: 10.3389/fpls.2020.627345] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Accepted: 12/30/2020] [Indexed: 05/08/2023]
Abstract
Studies in natural ecosystems show that adaptation of arbuscular mycorrhizal (AM) fungi and other microbial plant symbionts to local environmental conditions can help ameliorate stress and optimize plant fitness. This local adaptation arises from the process of multilevel selection, which is the simultaneous selection of a hierarchy of groups. Studies of multilevel selection in natural ecosystems may inform the creation of sustainable agroecosystems through developing strategies to effectively manage crop microbiomes including AM symbioses. Field experiments show that the species composition of AM fungal communities varies across environmental gradients, and that the biomass of AM fungi and their benefits for plants generally diminish when fertilization and irrigation eliminate nutrient and water limitations. Furthermore, pathogen protection by mycorrhizas is only important in environments prone to plant damage due to pathogens. Consequently, certain agricultural practices may inadvertently select for less beneficial root symbioses because the conventional agricultural practices of fertilization, irrigation, and use of pesticides can make these symbioses superfluous for optimizing crop performance. The purpose of this paper is to examine how multilevel selection influences the flow of matter, energy, and genetic information through mycorrhizal microbiomes in natural and agricultural ecosystems, and propose testable hypotheses about how mycorrhizae may be actively managed to increase agricultural sustainability.
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Affiliation(s)
- Nancy Collins Johnson
- School of Earth & Sustainability, Northern Arizona University, Flagstaff, AZ, United States
- Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, United States
| | - Kara Skye Gibson
- Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, United States
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28
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Xi N, Bloor JMG, Chu C. Soil microbes alter seedling performance and biotic interactions under plant competition and contrasting light conditions. ANNALS OF BOTANY 2020; 126:1089-1098. [PMID: 32686833 PMCID: PMC7596364 DOI: 10.1093/aob/mcaa134] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Accepted: 07/13/2020] [Indexed: 05/31/2023]
Abstract
BACKGROUND AND AIMS Growing evidence suggests that the net effect of soil microbes on plants depends on both abiotic and biotic conditions, but the context-dependency of soil feedback effects remains poorly understood. Here we test for interactions between the presence of conspecific soil microbes, plant competition and light availability on tree seedling performance. METHODS Seedlings of two congeneric tropical tree species, Bauhinia brachycarpa and Bauhinia variegata, were grown in either sterilized soil or soil conditioned by conspecific soil microorganisms in a two-phase greenhouse feedback experiment. We examined the interactive effects of soil treatment (live, sterilized), light availability (low, high) and plant competition (no competition, intraspecific and interspecific competition) on tree seedling biomass. We also investigated the linkages between the outcomes of soil feedback effects and soil microbial community structure. KEY RESULTS The outcomes of soil feedback effects on seedling biomass varied depending on both competition treatment and light availability. Under low light conditions, soil feedback effects were neutral irrespective of competition treatment and plant species. Soil feedback effects were negative in high light for seedlings with interspecific competition, but positive for seedlings growing alone or with intraspecific competition. Soil feedback effects for seedlings were driven by variation in the Gram-positive:Gram-negative bacteria ratio. Light and conspecific soil microbes had interactive effects on the competitive environment experienced by tree species; in low light the presence of conspecific soil microbes decreased plant competition intensity, whereas in high light both the intensity and the importance of competition increased for seedlings in the presence of soil microbes, irrespective of plant species. CONCLUSIONS Our findings underline the importance of light and plant competition for the outcomes of soil feedback effects on young tree seedlings, and suggest that reduced light availability may reduce the influence of conspecific soil microbes on plant-plant interactions.
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Affiliation(s)
- Nianxun Xi
- Department of Ecology, State Key Laboratory of Biocontrol and School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - Juliette M G Bloor
- INRAE, VetAgro-Sup, UREP, 5 Chemin de Beaulieu, Clermont-Ferrand, France
| | - Chengjin Chu
- Department of Ecology, State Key Laboratory of Biocontrol and School of Life Sciences, Sun Yat-sen University, Guangzhou, China
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29
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Lucero JE, Arab NM, Meyer ST, Pal RW, Fletcher RA, Nagy DU, Callaway RM, Weisser WW. Escape from natural enemies depends on the enemies, the invader, and competition. Ecol Evol 2020; 10:10818-10828. [PMID: 33072298 PMCID: PMC7548199 DOI: 10.1002/ece3.6737] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2020] [Revised: 06/05/2020] [Accepted: 06/29/2020] [Indexed: 11/19/2022] Open
Abstract
The enemy release hypothesis (ERH) attributes the success of some exotic plant species to reduced top‐down effects of natural enemies in the non‐native range relative to the native range. Many studies have tested this idea, but very few have considered the simultaneous effects of multiple kinds of enemies on more than one invasive species in both the native and non‐native ranges. Here, we examined the effects of two important groups of natural enemies–insect herbivores and soil biota–on the performance of Tanacetum vulgare (native to Europe but invasive in the USA) and Solidago canadensis (native to the USA but invasive in Europe) in their native and non‐native ranges, and in the presence and absence of competition. In the field, we replicated full‐factorial experiments that crossed insecticide, T. vulgare–S. canadensis competition, and biogeographic range (Europe vs. USA) treatments. In greenhouses, we replicated full‐factorial experiments that crossed soil sterilization, plant–soil feedback, and biogeographic range treatments. We evaluated the effects of experimental treatments on T. vulgare and S. canadensis biomass. The effects of natural enemies were idiosyncratic. In the non‐native range and relative to populations in the native range, T. vulgare escaped the negative effects of insect herbivores but not soil biota, depending upon the presence of S. canadensis; and S. canadensis escaped the negative effects of soil biota but not insect herbivores, regardless of competition. Thus, biogeographic escape from natural enemies depended upon the enemies, the invader, and competition.
Synthesis: By explicitly testing the ERH in terms of more than one kind of enemy, more than one invader, and more than one continent, this study enhances our nuanced perspective of how natural enemies can influence the performance of invasive species in their native and non‐native ranges.
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Affiliation(s)
| | - Nafiseh Mahdavi Arab
- Terrestrial Ecology Research Group Department of Ecology and Ecosystem Management School of Life Sciences Weihenstephan Technical University of Munich Freising Germany
| | - Sebastian T Meyer
- Terrestrial Ecology Research Group Department of Ecology and Ecosystem Management School of Life Sciences Weihenstephan Technical University of Munich Freising Germany
| | - Robert W Pal
- Department of Biological Sciences Montana Technological University Butte MT USA.,Institute of Biology Faculty of Sciences University of Pecs Pecs Hungary
| | - Rebecca A Fletcher
- School of Plant and Environmental Sciences Virginia Tech Blacksburg VA USA
| | - David U Nagy
- Institute of Biology Faculty of Sciences University of Pecs Pecs Hungary
| | - Ragan M Callaway
- Divison of Biological Sciences and the Institute on Ecosystems University of Montana Missoula MT USA
| | - Wolfgang W Weisser
- Terrestrial Ecology Research Group Department of Ecology and Ecosystem Management School of Life Sciences Weihenstephan Technical University of Munich Freising Germany
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30
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Werger L, Bergmann J, Weber E, Heinze J. Wind intensity affects fine root morphological traits with consequences for plant-soil feedback effects. AOB PLANTS 2020; 12:plaa050. [PMID: 33133480 PMCID: PMC7583724 DOI: 10.1093/aobpla/plaa050] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/04/2020] [Accepted: 09/07/2020] [Indexed: 06/11/2023]
Abstract
Wind influences the development, architecture and morphology of plant roots and may modify subsequent interactions between plants and soil (plant-soil feedbacks-PSFs). However, information on wind effects on fine root morphology is scarce and the extent to which wind changes plant-soil interactions remains unclear. Therefore, we investigated the effects of two wind intensity levels by manipulating surrounding vegetation height in a grassland PSF field experiment. We grew four common plant species (two grasses and two non-leguminous forbs) with soil biota either previously conditioned by these or other species and tested the effect of wind on root:shoot ratio, fine root morphological traits as well as the outcome for PSFs. Wind intensity did not affect biomass allocation (i.e. root:shoot ratio) in any species. However, fine-root morphology of all species changed under high wind intensity. High wind intensity increased specific root length and surface area and decreased root tissue density, especially in the two grasses. Similarly, the direction of PSFs changed under high wind intensity in all four species, but differences in biomass production on the different soils between high and low wind intensity were marginal and most pronounced when comparing grasses with forbs. Because soils did not differ in plant-available nor total nutrient content, the results suggest that wind-induced changes in root morphology have the potential to influence plant-soil interactions. Linking wind-induced changes in fine-root morphology to effects on PSF improves our understanding of plant-soil interactions under changing environmental conditions.
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Affiliation(s)
- Luise Werger
- Institute of Biochemistry and Biology, University of Potsdam, Potsdam, Germany
| | - Joana Bergmann
- Institute of Biology, Dahlem Center of Plant Science (DCPS), Freie Universität Berlin, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
- Leibniz Centre for Agricultural Landscape Research (ZALF), Müncheberg, Germany
| | - Ewald Weber
- Institute of Biochemistry and Biology, University of Potsdam, Potsdam, Germany
| | - Johannes Heinze
- Institute of Biochemistry and Biology, University of Potsdam, Potsdam, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
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31
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Microbiome Management by Biological and Chemical Treatments in Maize Is Linked to Plant Health. Microorganisms 2020; 8:microorganisms8101506. [PMID: 33007821 PMCID: PMC7599774 DOI: 10.3390/microorganisms8101506] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Revised: 09/25/2020] [Accepted: 09/29/2020] [Indexed: 01/04/2023] Open
Abstract
The targeted application of plant growth-promoting rhizobacteria (PGPR) provides the key for a future sustainable agriculture with reduced pesticide application. PGPR interaction with the indigenous microbiota is poorly understood, but essential to develop reliable applications. Therefore, Stenotrophomonas rhizophila SPA-P69 was applied as a seed coating and in combination with a fungicide based on the active ingredients fludioxonil, metalaxyl-M, captan and ziram. The plant performances and rhizosphere compositions of treated and non-treated maize plants of two field trials were analyzed. Plant health was significantly increased by treatment; however, overall corn yield was not changed. By applying high-throughput amplicon sequencing of the 16S rRNA and the ITS genes, the bacterial and fungal changes in the rhizosphere due to different treatments were determined. Despite the fact that treatments had a significant impact on the rhizosphere microbiota (9–12%), the field site was identified as the main driver (27–37%). The soil microbiota composition from each site was significantly different, which explains the site-specific effects. In this study we were able to show the first indications how PGPR treatments increase plant health via microbiome shifts in a site-specific manner. This way, first steps towards a detailed understanding of PGPRs and developments of consistently efficient applications in diverse environments are made.
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32
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Stein C, Mangan SA. Soil biota increase the likelihood for coexistence among competing plant species. Ecology 2020; 101:e03147. [PMID: 33460105 DOI: 10.1002/ecy.3147] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 05/01/2020] [Accepted: 06/09/2020] [Indexed: 01/28/2023]
Abstract
Theory predicts that stable species coexistence will occur when population growth rates of competitively dominant species are suppressed when at high conspecific density. Although there is now compelling evidence that plant communities exhibit negative density dependence, the relative importance of the underlying processes leading to these patterns is rarely tested. We coupled reciprocal greenhouse and field experiments with community dynamics modeling to untangle the relative importance of soil biota from competition as stabilizing forces to coexistence. We found that (1) plant-soil biotic interactions compared to competitive interactions were stronger stabilizing forces, (2) only the strength of plant-soil biotic interactions was dependent on plant evolutionary history, and (3) the variation in the strength of plant-soil biotic interactions was correlated with relative abundance patterns in an opposite way than was the variation in the strength of competitive interactions. Collectively, our results demonstrate the fundamental role soil biota have in maintaining plant community diversity.
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Affiliation(s)
- Claudia Stein
- Department of Biology and Environmental Sciences, Auburn University at Montgomery, 7061 Senator's Drive, Montgomery, Alabama, 36117, USA.,Tyson Research Center, Washington University in St. Louis, 6750 Tyson Valley Rd, Eureka, Missouri, 63025, USA
| | - Scott A Mangan
- Tyson Research Center, Washington University in St. Louis, 6750 Tyson Valley Rd, Eureka, Missouri, 63025, USA.,Department of Biological Sciences, Arkansas State University, Jonesboro, Arkansas, 72467, USA
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33
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De Long JR, Heinen R, Jongen R, Hannula SE, Huberty M, Kielak AM, Steinauer K, Bezemer TM. How plant–soil feedbacks influence the next generation of plants. Ecol Res 2020. [DOI: 10.1111/1440-1703.12165] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Jonathan R. De Long
- Department of Terrestrial Ecology Netherlands Institute of Ecology Wageningen The Netherlands
- Wageningen UR Greenhouse Horticulture Bleiswijk The Netherlands
| | - Robin Heinen
- Department of Terrestrial Ecology Netherlands Institute of Ecology Wageningen The Netherlands
- Institute of Biology, Section Plant Ecology and Phytochemistry Leiden University Leiden The Netherlands
- Lehrstuhl fur Terrestrische Okologie, Landnutzung und Umwelt Technische Universitat Munchen, Wissenschaftszentrum Weihenstephan fur Ernahrung Freising Germany
| | - Renske Jongen
- Department of Terrestrial Ecology Netherlands Institute of Ecology Wageningen The Netherlands
| | - S. Emilia Hannula
- Department of Terrestrial Ecology Netherlands Institute of Ecology Wageningen The Netherlands
| | - Martine Huberty
- Department of Terrestrial Ecology Netherlands Institute of Ecology Wageningen The Netherlands
- Institute of Biology, Section Plant Ecology and Phytochemistry Leiden University Leiden The Netherlands
| | - Anna M. Kielak
- Department of Terrestrial Ecology Netherlands Institute of Ecology Wageningen The Netherlands
| | - Katja Steinauer
- Department of Terrestrial Ecology Netherlands Institute of Ecology Wageningen The Netherlands
| | - T. Martijn Bezemer
- Department of Terrestrial Ecology Netherlands Institute of Ecology Wageningen The Netherlands
- Institute of Biology, Section Plant Ecology and Phytochemistry Leiden University Leiden The Netherlands
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34
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Crawford KM, Hawkes CV. Soil precipitation legacies influence intraspecific plant-soil feedback. Ecology 2020; 101:e03142. [PMID: 32813278 DOI: 10.1002/ecy.3142] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/12/2020] [Revised: 05/12/2020] [Accepted: 06/09/2020] [Indexed: 01/04/2023]
Abstract
Feedbacks between plants and soil microbial communities can play an important role in structuring plant communities. However, little is known about how soil legacies caused by environmental disturbances such as drought and extreme precipitation events may affect plant-soil feedback or whether plant-soil feedback operates within species as it does between species. If soil legacies alter plant-soil feedback among genotypes within a plant species, then soil legacies may alter the diversity within plant populations. We conducted a fully factorial pairwise plant-soil feedback experiment to test how precipitation legacies influenced intraspecific plant-soil feedbacks among three genotypes of a dominant grass species, Panicum virgatum. Panicum virgatum experienced negative intraspecific plant-soil feedback, i.e., genotypes generally performed worse on soil from the same genotype than different genotypes. Soil precipitation legacies reversed the rank order of the strength of negative feedback among the genotypes. Feedback is often positively correlated with plant relative abundance. Therefore, our results suggest that soil precipitation legacies may alter the genotypic composition of P. virgatum populations, favoring genotypes that develop less negative feedback. Changes in intraspecific diversity will likely further affect community structure and ecosystem functioning, and may constrain the ability of populations to respond to future changes in climate.
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Affiliation(s)
- Kerri M Crawford
- Department of Biology and Biochemistry, University of Houston, Houston, Texas, 77204, USA
| | - Christine V Hawkes
- Department of Integrative Biology, University of Texas at Austin, Austin, Texas, 78712, USA
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35
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Heinze J, Bezemer TM, Joshi J. Editorial: The Next Step: Disentangling the Role of Plant-Soil Feedbacks in Plant Performance and Species Coexistence Under Natural Conditions. Front Ecol Evol 2020. [DOI: 10.3389/fevo.2020.00231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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36
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Beals KK, Moore JAM, Kivlin SN, Bayliss SLJ, Lumibao CY, Moorhead LC, Patel M, Summers JL, Ware IM, Bailey JK, Schweitzer JA. Predicting Plant-Soil Feedback in the Field: Meta-Analysis Reveals That Competition and Environmental Stress Differentially Influence PSF. Front Ecol Evol 2020. [DOI: 10.3389/fevo.2020.00191] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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37
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Segnitz RM, Russo SE, Davies SJ, Peay KG. Ectomycorrhizal fungi drive positive phylogenetic plant-soil feedbacks in a regionally dominant tropical plant family. Ecology 2020; 101:e03083. [PMID: 32323299 DOI: 10.1002/ecy.3083] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Revised: 02/19/2020] [Accepted: 03/18/2020] [Indexed: 11/08/2022]
Abstract
While work in temperate forests suggests that there are consistent differences in plant-soil feedback (PSF) between plants with arbuscular and ectomycorrhizal associations, it is unclear whether these differences exist in tropical rainforests. We tested the effects of mycorrhizal type, phylogenetic relationships to overstory species, and soil fertility on the growth of tree seedlings in a tropical Bornean rainforest with a high diversity of both ectomycorrhizal and arbuscular mycorrhizal trees. We found that ectomycorrhizal tree seedlings had higher growth in soils conditioned by close relatives and that this was associated with higher mycorrhizal colonization. By contrast, arbuscular mycorrhizal tree seedlings generally grew more poorly in soils conditioned by close relatives. For ectomycorrhizal species, the phylogenetic trend was insensitive to soil fertility. For arbuscular mycorrhizal seedlings, however, the effect of growing in soils conditioned by close relatives became increasingly negative as soil fertility increased. Our results demonstrate consistent effects of mycorrhizal type on plant-soil feedbacks across forest biomes. The positive effects of ectomycorrhizal symbiosis may help explain biogeographic variation across tropical forests, such as familial dominance of the Dipterocarpaceae in southeast Asia. However, positive feedbacks also raise questions about the role of PSFs in maintaining tropical diversity.
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Affiliation(s)
- R Max Segnitz
- Department of Biology, Stanford University, Stanford, California, 94305-5020, USA
| | - Sabrina E Russo
- School of Biological Sciences, University of Nebraska, Lincoln, Nebraska, 68588-0118, USA
| | - Stuart J Davies
- Center for Tropical Forest Science, Smithsonian Institution, Washington, D.C., 20013-7012, USA
| | - Kabir G Peay
- Department of Biology, Stanford University, Stanford, California, 94305-5020, USA
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38
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Pineda A, Kaplan I, Hannula SE, Ghanem W, Bezemer TM. Conditioning the soil microbiome through plant-soil feedbacks suppresses an aboveground insect pest. THE NEW PHYTOLOGIST 2020; 226:595-608. [PMID: 31863484 PMCID: PMC7155073 DOI: 10.1111/nph.16385] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2019] [Accepted: 12/04/2019] [Indexed: 05/21/2023]
Abstract
Soils and their microbiomes are now recognized as key components of plant health, but how to steer those microbiomes to obtain their beneficial functions is still unknown. Here, we assess whether plant-soil feedbacks can be applied in a crop system to shape soil microbiomes that suppress herbivorous insects in above-ground tissues. We used four grass and four forb species to condition living soil. Then we inoculated those soil microbiomes into sterilized soil and grew chrysanthemum as a focal plant. We evaluated the soil microbiome in the inocula and after chrysanthemum growth, as well as plant and herbivore parameters. We show that inocula and inoculated soil in which a focal plant had grown harbor remarkably different microbiomes, with the focal plant exerting a strong negative effect on fungi, especially arbuscular mycorrhizal fungi. Soil inoculation consistently induced resistance against the thrips Frankliniella occidentalis, but not against the mite Tetranychus urticae, when compared with sterilized soil. Additionally, plant species shaped distinct microbiomes that had different effects on thrips, chlorogenic acid concentrations in leaves and plant growth. This study provides a proof-of-concept that the plant-soil feedback concept can be applied to steer soil microbiomes with the goal of inducing resistance above ground against herbivorous insects.
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Affiliation(s)
- Ana Pineda
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)Wageningen6700 ABthe Netherlands
| | - Ian Kaplan
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)Wageningen6700 ABthe Netherlands
- Department of EntomologyPurdue UniversityWest LafayetteIN47907USA
| | - S. Emilia Hannula
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)Wageningen6700 ABthe Netherlands
| | - Wadih Ghanem
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)Wageningen6700 ABthe Netherlands
- Department of EntomologyPurdue UniversityWest LafayetteIN47907USA
| | - T. Martijn Bezemer
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)Wageningen6700 ABthe Netherlands
- Institute of BiologySection Plant Ecology and PhytochemistryLeiden UniversityLeiden2300 RAthe Netherlands
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39
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Heinze J, Wacker A, Kulmatiski A. Plant-soil feedback effects altered by aboveground herbivory explain plant species abundance in the landscape. Ecology 2020; 101:e03023. [PMID: 32083736 DOI: 10.1002/ecy.3023] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/16/2019] [Revised: 01/08/2020] [Accepted: 01/30/2020] [Indexed: 01/03/2023]
Abstract
Relatively little is known about how plant-soil feedbacks (PSFs) may affect plant growth in field conditions where factors such as herbivory may be important. Using a potted experiment in a grassland, we measured PSFs with and without aboveground insect herbivory for 20 plant species. We then compared PSF values to plant landscape abundance. Aboveground herbivory had a large negative effect on PSF values. For 15 of 20 species, PSFs were more negative with herbivory than without. This occurred because plant biomass on "home" soils was smaller with herbivory than without. PSF values with herbivory were correlated with plant landscape abundance, whereas PSF values without herbivory were not. Shoot nitrogen concentrations suggested that plants create soils that increase nitrogen uptake, but that greater shoot nitrogen values increase herbivory and that the net effect of positive PSF and greater aboveground herbivory is less aboveground biomass. Results provided clear evidence that PSFs alone have limited power in explaining species abundances and that herbivory has stronger effects on plant biomass and growth on the landscape. Our results provide a potential explanation for observed differences between greenhouse and field PSF experiments and suggest that PSF experiments need to consider important biotic interactions, like aboveground herbivory, particularly when the goal of PSF research is to understand plant growth in field conditions.
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Affiliation(s)
- Johannes Heinze
- Institute of Biochemistry and Biology, University of Potsdam, Maulbeerallee 1, D-14469, Potsdam, Germany.,Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Altensteinstrasse 6, 14195, Berlin, Germany
| | - Alexander Wacker
- Zoological Institute and Museum, University of Greifswald, Loitzer Strasse 26, 17489, Greifswald, Germany
| | - Andrew Kulmatiski
- Department of Wildland Resources and the Ecology Center, Utah State University, 84322-5230, Logan, Utah, USA
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40
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Dietterich LH, Li A, Garvey SM, Casper BB. Aboveground Competition and Herbivory Overpower Plant-Soil Feedback Contributions to Succession in a Remediated Grassland. Front Ecol Evol 2019. [DOI: 10.3389/fevo.2019.00459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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41
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Duell EB, Zaiger K, Bever JD, Wilson GWT. Climate Affects Plant-Soil Feedback of Native and Invasive Grasses: Negative Feedbacks in Stable but Not in Variable Environments. Front Ecol Evol 2019. [DOI: 10.3389/fevo.2019.00419] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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42
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43
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Pugnaire FI, Morillo JA, Peñuelas J, Reich PB, Bardgett RD, Gaxiola A, Wardle DA, van der Putten WH. Climate change effects on plant-soil feedbacks and consequences for biodiversity and functioning of terrestrial ecosystems. SCIENCE ADVANCES 2019; 5:eaaz1834. [PMID: 31807715 PMCID: PMC6881159 DOI: 10.1126/sciadv.aaz1834] [Citation(s) in RCA: 106] [Impact Index Per Article: 21.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2019] [Accepted: 10/28/2019] [Indexed: 05/19/2023]
Abstract
Plant-soil feedbacks (PSFs) are interactions among plants, soil organisms, and abiotic soil conditions that influence plant performance, plant species diversity, and community structure, ultimately driving ecosystem processes. We review how climate change will alter PSFs and their potential consequences for ecosystem functioning. Climate change influences PSFs through the performance of interacting species and altered community composition resulting from changes in species distributions. Climate change thus affects plant inputs into the soil subsystem via litter and rhizodeposits and alters the composition of the living plant roots with which mutualistic symbionts, decomposers, and their natural enemies interact. Many of these plant-soil interactions are species-specific and are greatly affected by temperature, moisture, and other climate-related factors. We make a number of predictions concerning climate change effects on PSFs and consequences for vegetation-soil-climate feedbacks while acknowledging that they may be context-dependent, spatially heterogeneous, and temporally variable.
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Affiliation(s)
- Francisco I. Pugnaire
- Estación Experimental de Zonas Áridas, Consejo Superior de Investigaciones Científicas, Carretera de Sacramento s/n, La Cañada de San Urbano, E-04120 Almería, Spain
- Laboratorio Internacional en Cambio Global (LINCGlobal)
| | - José A. Morillo
- Estación Experimental de Zonas Áridas, Consejo Superior de Investigaciones Científicas, Carretera de Sacramento s/n, La Cañada de San Urbano, E-04120 Almería, Spain
- Laboratorio Internacional en Cambio Global (LINCGlobal)
| | - Josep Peñuelas
- Consejo Superior de Investigaciones Científicas, Global Ecology Unit CREAF-CSIC-UAB, Bellaterra, Catalonia E-08193, Spain
- CREAF, Cerdanyola del Vallès, Catalonia E-08193, Spain
| | - Peter B. Reich
- Department of Forest Resources, University of Minnesota, St. Paul, MN 55108, USA
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2753, Australia
| | - Richard D. Bardgett
- Department of Earth and Environmental Sciences, The University of Manchester, Michael Smith Building, Oxford Road, Manchester M13 9PT, UK
| | - Aurora Gaxiola
- Laboratorio Internacional en Cambio Global (LINCGlobal)
- Departamento de Ecología, Pontificia Universidad Católica de Chile, Alameda 340, Santiago, Chile
- Instituto de Ecología y Biodiversidad, Las Palmeras 3425, Santiago, Chile
| | - David A. Wardle
- Asian School of the Environment, Nanyang Technological University, 50 Nanyang Avenue, 639798, Singapore
| | - Wim H. van der Putten
- Department of Terrestrial Ecology, Netherlands Institute of Ecology, Post Office Box 50, 6700 AB Wageningen, Netherlands
- Department of Nematology, Wageningen University, 6708 PB Wageningen, Netherlands
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Veen GF, Wubs ERJ, Bardgett RD, Barrios E, Bradford MA, Carvalho S, De Deyn GB, de Vries FT, Giller KE, Kleijn D, Landis DA, Rossing WAH, Schrama M, Six J, Struik PC, van Gils S, Wiskerke JSC, van der Putten WH, Vet LEM. Applying the Aboveground-Belowground Interaction Concept in Agriculture: Spatio-Temporal Scales Matter. Front Ecol Evol 2019. [DOI: 10.3389/fevo.2019.00300] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
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The relative importance of plant-soil feedbacks for plant-species performance increases with decreasing intensity of herbivory. Oecologia 2019; 190:651-664. [DOI: 10.1007/s00442-019-04442-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2019] [Accepted: 06/19/2019] [Indexed: 11/25/2022]
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