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Saunders AN, Gallant JR. A review of the reproductive biology of mormyroid fishes: An emerging model for biomedical research. JOURNAL OF EXPERIMENTAL ZOOLOGY. PART B, MOLECULAR AND DEVELOPMENTAL EVOLUTION 2024; 342:144-163. [PMID: 38361399 DOI: 10.1002/jez.b.23242] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Revised: 12/13/2023] [Accepted: 01/17/2024] [Indexed: 02/17/2024]
Abstract
Mormyroidea is a superfamily of weakly electric African fishes with great potential as a model in a variety of biomedical research areas including systems neuroscience, muscle cell and craniofacial development, ion channel biophysics, and flagellar/ciliary biology. However, they are currently difficult to breed in the laboratory setting, which is essential for any tractable model organism. As such, there is a need to better understand the reproductive biology of mormyroids to breed them more reliably in the laboratory to effectively use them as a biomedical research model. This review seeks to (1) briefly highlight the biomedically relevant phenotypes of mormyroids and (2) compile information about mormyroid reproduction including sex differences, breeding season, sexual maturity, gonads, gametes, and courtship/spawning behaviors. We also highlight areas of mormyroid reproductive biology that are currently unexplored and/or have the potential for further investigation that may provide insights into more successful mormyroid laboratory breeding methods.
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Affiliation(s)
- Alyssa N Saunders
- Department of Integrative Biology, Michigan State University, East Lansing, Michigan, USA
- Ecology, Evolution, and Behavior Program, Michigan State University, East Lansing, Michigan, USA
| | - Jason R Gallant
- Department of Integrative Biology, Michigan State University, East Lansing, Michigan, USA
- Ecology, Evolution, and Behavior Program, Michigan State University, East Lansing, Michigan, USA
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Losilla M, Gallant JR. Molecular evolution of the ependymin-related gene epdl2 in African weakly electric fish. G3 (BETHESDA, MD.) 2023; 13:6931758. [PMID: 36529459 PMCID: PMC9997568 DOI: 10.1093/g3journal/jkac331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2022] [Revised: 11/01/2022] [Accepted: 11/16/2022] [Indexed: 12/23/2022]
Abstract
Gene duplication and subsequent molecular evolution can give rise to taxon-specific gene specializations. In previous work, we found evidence that African weakly electric fish (Mormyridae) may have as many as three copies of the epdl2 gene, and the expression of two epdl2 genes is correlated with electric signal divergence. Epdl2 belongs to the ependymin-related family (EPDR), a functionally diverse family of secretory glycoproteins. In this study, we first describe vertebrate EPDR evolution and then present a detailed evolutionary history of epdl2 in Mormyridae with emphasis on the speciose genus Paramormyrops. Using Sanger sequencing, we confirm three apparently functional epdl2 genes in Paramormyrops kingsleyae. Next, we developed a nanopore-based amplicon sequencing strategy and bioinformatics pipeline to obtain and classify full-length epdl2 gene sequences (N = 34) across Mormyridae. Our phylogenetic analysis proposes three or four epdl2 paralogs dating from early Paramormyrops evolution. Finally, we conducted selection tests which detected positive selection around the duplication events and identified ten sites likely targeted by selection in the resulting paralogs. These sites' locations in our modeled 3D protein structure involve four sites in ligand binding and six sites in homodimer formation. Together, these findings strongly imply an evolutionary mechanism whereby epdl2 genes underwent selection-driven functional specialization after tandem duplications in the rapidly speciating Paramormyrops. Considering previous evidence, we propose that epdl2 may contribute to electric signal diversification in mormyrids, an important aspect of species recognition during mating.
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Affiliation(s)
- Mauricio Losilla
- Department of Integrative Biology, Michigan State University, East Lansing, MI 48824, USA.,Graduate Program in Ecology, Evolution and Behavior, Michigan State University, East Lansing, MI 48824, USA
| | - Jason R Gallant
- Department of Integrative Biology, Michigan State University, East Lansing, MI 48824, USA.,Graduate Program in Ecology, Evolution and Behavior, Michigan State University, East Lansing, MI 48824, USA
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Ford KL, Albert JS. Is the medium the message? Functional diversity across abiotic gradients in freshwater electric fishes. Integr Comp Biol 2022; 62:945-957. [DOI: 10.1093/icb/icac010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Evolutionary transitions across abiotic gradients can occur among habitats at multiple spatial scales, and among taxa and biotas through a range of ecological and evolutionary time frames. Two diverse groups of electric fishes, Neotropical Gymnotiformes and Afrotropical Mormyroidea, offer interesting examples of potentially convergent evolution in aspects of morphological, physiological, and life history traits. We examined biogeographical, morphological, and functional patterns across these two groups to assess the degree of convergence in association with abiotic environmental variables. While there are superficial similarities across the groups and continents, we found substantially more differences in terms of habitat occupancy, electric signal diversity, and morphological disparity. These differences likely correlate to differences in biogeographical histories across the Neotropics and Afrotropics, biotic factors associated with aquatic life and electric signals, and sampling issues plaguing both groups. Additional research and sampling are required to make further inferences about how electric fishes transition throughout diverse freshwater habitats across both microevolutionary and macroevolutionary scales. We find little evidence that abiotic gradients in the freshwater habitat medium have driven convergent evolution of functional traits in these two continental radiations of electric fishes.
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Affiliation(s)
- Kassandra L Ford
- Institute of Ecology and Evolution, Universität Bern, Switzerland
- Department of Biology, University of Louisiana at Lafayette, USA
| | - James S Albert
- Department of Biology, University of Louisiana at Lafayette, USA
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Intergenus F1-hybrids of African weakly electric fish (Mormyridae: Gnathonemus petersii ♂ × Campylomormyrus compressirostris ♀) are fertile. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2022; 208:355-371. [PMID: 35119505 PMCID: PMC9123046 DOI: 10.1007/s00359-022-01542-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2021] [Revised: 01/09/2022] [Accepted: 01/10/2022] [Indexed: 11/16/2022]
Abstract
Hybridisation is an important element of adaptive radiation in fish but data are limited in weakly electric mormyrid fish in this respect. Recently, it has been shown that intragenus hybrids (Campylomormyrus) are fertile and are able to produce F2-fish. In this paper, we demonstrate that even intergenus hybrids (Gnathonemus petersii ♂ × Campylomormyrus compressirostris ♀) are fertile. Three artificial reproduction (AR) trials, with an average fertilisation rate of ca. 23%, yielded different numbers of survivals (maximally about 50%) of the F1-hybrids. The complete ontogenetic development of these hybrids is described concerning their morphology and electric organ discharge (EOD). Two EOD types emerged at the juvenile stage, which did not change up to adulthood. Type I consisted of four phases and Type II was triphasic. The minimum body length at sexual maturity was between 10 and 11 cm. Malformations, growth and mortality rates are also described.
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Hensley NM, Ellis EA, Leung NY, Coupart J, Mikhailovsky A, Taketa DA, Tessler M, Gruber DF, De Tomaso AW, Mitani Y, Rivers TJ, Gerrish GA, Torres E, Oakley TH. Selection, drift, and constraint in cypridinid luciferases and the diversification of bioluminescent signals in sea fireflies. Mol Ecol 2021; 30:1864-1879. [PMID: 33031624 PMCID: PMC11629831 DOI: 10.1111/mec.15673] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Revised: 09/09/2020] [Accepted: 09/18/2020] [Indexed: 02/07/2023]
Abstract
Understanding the genetic causes of evolutionary diversification is challenging because differences across species are complex, often involving many genes. However, cases where single or few genetic loci affect a trait that varies dramatically across a radiation of species provide tractable opportunities to understand the genetics of diversification. Here, we begin to explore how diversification of bioluminescent signals across species of cypridinid ostracods ("sea fireflies") was influenced by evolution of a single gene, cypridinid-luciferase. In addition to emission spectra ("colour") of bioluminescence from 21 cypridinid species, we report 13 new c-luciferase genes from de novo transcriptomes, including in vitro assays to confirm function of four of those genes. Our comparative analyses suggest some amino acid sites in c-luciferase evolved under episodic diversifying selection and may be associated with changes in both enzyme kinetics and colour, two enzymatic functions that directly impact the phenotype of bioluminescent signals. The analyses also suggest multiple other amino acid positions in c-luciferase evolved neutrally or under purifying selection, and may have impacted the variation of colour of bioluminescent signals across genera. Previous mutagenesis studies at candidate sites show epistatic interactions, which could constrain the evolution of c-luciferase function. This work provides important steps toward understanding the genetic basis of diversification of behavioural signals across multiple species, suggesting different evolutionary processes act at different times during a radiation of species. These results set the stage for additional mutagenesis studies that could explicitly link selection, drift, and constraint to the evolution of phenotypic diversification.
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Affiliation(s)
- Nicholai M. Hensley
- Department of Ecology, Evolution, & Marine Biology, University of California, Santa Barbara, Santa Barbara, CA, USA
| | - Emily A. Ellis
- Department of Ecology, Evolution, & Marine Biology, University of California, Santa Barbara, Santa Barbara, CA, USA
| | - Nicole Y. Leung
- Neuroscience Research Institute, University of California, Santa Barbara, Santa Barbara, CA, USA
- Department of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA, USA
| | - John Coupart
- Department of Ecology, Evolution, & Marine Biology, University of California, Santa Barbara, Santa Barbara, CA, USA
| | - Alexander Mikhailovsky
- Department of Chemistry and Biochemistry, University of California, Santa Barbara, Santa Barbara, CA, USA
| | - Daryl A. Taketa
- Department of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA, USA
| | - Michael Tessler
- American Museum of Natural History and New York University, New York, NY, USA
- Department of Biology, St. Francis College, Brooklyn, NY, USA
| | - David F. Gruber
- Department of Biology and Environmental Science, City University of New York Baruch College, New York, NY, USA
| | - Anthony W. De Tomaso
- Department of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA, USA
| | - Yasuo Mitani
- Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Sapporo, Japan
| | - Trevor J. Rivers
- Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, USA
| | - Gretchen A. Gerrish
- Department of Biology, University of Wisconsin – La Crosse, La Crosse, WI, USA
| | - Elizabeth Torres
- Department of Biological Sciences, California State University, Los Angeles, Los Angeles, CA, USA
| | - Todd H. Oakley
- Department of Ecology, Evolution, & Marine Biology, University of California, Santa Barbara, Santa Barbara, CA, USA
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Expanding evolutionary neuroscience: insights from comparing variation in behavior. Neuron 2021; 109:1084-1099. [PMID: 33609484 DOI: 10.1016/j.neuron.2021.02.002] [Citation(s) in RCA: 48] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 01/25/2021] [Accepted: 01/28/2021] [Indexed: 01/01/2023]
Abstract
Neuroscientists have long studied species with convenient biological features to discover how behavior emerges from conserved molecular, neural, and circuit level processes. With the advent of new tools, from viral vectors and gene editing to automated behavioral analyses, there has been a recent wave of interest in developing new, "nontraditional" model species. Here, we advocate for a complementary approach to model species development, that is, model clade development, as a way to integrate an evolutionary comparative approach with neurobiological and behavioral experiments. Capitalizing on natural behavioral variation in and investing in experimental tools for model clades will be a valuable strategy for the next generation of neuroscience discovery.
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Picq S, Sperling J, Cheng CJ, Carlson BA, Gallant JR. Genetic drift does not sufficiently explain patterns of electric signal variation among populations of the mormyrid electric fish Paramormyrops kingsleyae. Evolution 2020; 74:911-935. [PMID: 32187650 PMCID: PMC7816287 DOI: 10.1111/evo.13953] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2015] [Revised: 02/13/2020] [Accepted: 02/20/2020] [Indexed: 11/28/2022]
Abstract
Communication signals serve crucial survival and reproductive functions. In Gabon, the widely distributed mormyrid fish Paramormyrops kingsleyae emits an electric organ discharge (EOD) signal with a dual role in communication and electrolocation that exhibits remarkable variation: populations of P. kingsleyae have either biphasic or triphasic EODs, a feature that characterizes interspecific signal diversity among the Paramormyrops genus. We quantified variation in EODs of 327 P. kingsleyae from nine populations and compared it to genetic variation estimated from microsatellite loci. We found no correlation between electric signal and genetic distances, suggesting that EOD divergence cannot be explained by drift alone. An alternative hypothesis is that EOD differences are used for mate discrimination, which would require P. kingsleyae be capable of differentiating between divergent EOD waveforms. Using a habituation-dishabituation assay, we found that P. kingsleyae can discriminate between biphasic and triphasic EOD types. Nonetheless, patterns of genetic and electric organ morphology divergence provide evidence for hybridization between these signal types. Although reproductive isolation with respect to signal type is incomplete, our results suggest that EOD variation in P. kingsleyae could be a cue for assortative mating.
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Affiliation(s)
- Sophie Picq
- Michigan State University Department of Integrative Biology, East Lansing MI 48824 USA
| | - Joshua Sperling
- Cornell University Department of Neurobiology and Behavior, Ithaca NY 14853 USA
| | - Catherine J. Cheng
- Cornell University Department of Neurobiology and Behavior, Ithaca NY 14853 USA
| | - Bruce A. Carlson
- Washington University in St. Louis Department of Biology, St. Louis, MO 63130 USA
| | - Jason R. Gallant
- Michigan State University Department of Integrative Biology, East Lansing MI 48824 USA
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