The polycyclic aromatic hydrocarbon phenanthrene causes oxidative stress and alters polyamine metabolism in the aquatic liverwort Riccia fluitans L

Functionally coherent transcriptional responses of Jatropha curcas and Pseudomonas fragi for rhizosphere mediated degradation of pyrene

Pyrene is an extremely hazardous, carcinogenic polycyclic aromatic hydrocarbon (PAH). The plant-microbe interaction between Pseudomonas fragi DBC and Jatropha curcas was employed for biodegradation of pyrene and their transcriptional responses were compared. The genome of P. fragi DBC had genes for PAH degrading enzymes i.e. dioxygenases and dehydrogenases, along with root colonization (trpD, trpG, trpE and trpF), chemotaxis (flhF and flgD), stress adaptation (gshA, nuoHBEKNMG), and detoxification (algU and yfc). The transcriptional expression of catA and yfc that respectively code for catabolic enzyme (catechol-1, 2-dioxygnase) and glutathione-s-transferase for detoxification functions were quantitatively measured by qPCR. The catA was expressed in presence of artificial root exudate with or without pyrene, and glucose confirming the non-selective approach of bacteria, as desired. Pyrene induced 100-fold increase of yfc expression than catA, while there was no expression of yfc in absence of pyrene. The transcriptome of plant roots, in presence of pyrene, with or without P. fragi DBC inoculation was analysed. The P. fragi DBC could upregulate the genes for plant growth, induced the systemic acquired resistance and also ameliorated the stress response in Jatropha roots.

The Method and Study of Detecting Phenanthrene in Seawater Based on a Carbon Nanotube-Chitosan Oligosaccharide Modified Electrode Immunosensor

Phenanthrene (PHE), as a structurally simple, tricyclic, polycyclic aromatic hydrocarbon (PAHs), is widely present in marine environments and organisms, with serious ecological and health impacts. It is crucial to study fast and simple high-sensitivity detection methods for phenanthrene in seawater for the environment and the human body. In this paper, a immunosensor was prepared by using a multi-wall carbon nanotube (MWCNTs)-chitosan oligosaccharide (COS) nanocomposite membrane loaded with phenanthrene antibody. The principle was based on the antibody-antigen reaction in the immune reaction, using the strong electron transfer ability of multi-walled carbon nanotubes, coupled with chitosan oligosaccharides with an excellent film formation and biocompatibility, to amplify the detection signal. The content of the phenanthrene in seawater was studied via differential pulse voltammetry (DPV) using a potassium ferricyanide system as a redox probe. The antibody concentration, pH value, and probe concentration were optimized. Under the optimal experimental conditions, the response peak current of the phenanthrene was inversely proportional to the concentration of phenanthrene, in the range from 0.5 ng·mL-1 to 80 ng·mL-1, and the detection limit was 0.30 ng·mL-1. The immune sensor was successfully applied to the detection of phenanthrene in marine water, with a recovery rate of 96.1~101.5%, and provided a stable, sensitive, and accurate method for the real-time monitoring of marine environments.

Biochar application for remediation of organic toxic pollutants in contaminated soils; An update

Bioremediation of organic contaminants has become a major environmental concern in the last few years, due to its bio-resistance and potential to accumulate in the environment. The use of diverse technologies, involving chemical and physical principles, and passive uptake utilizing sorption using ecofriendly substrates have drawn a lot of interest. Biochar has got attention mainly due to its simplicity of manufacturing, treatment, and disposal, as it is a less expensive and more efficient material, and has a lot of potential for the remediation of organic contaminants. This review highlighted the adverse impact of persistent organic pollutants on the environment and soil biota. The utilization of biochar to remediate soil and contaminated compounds i.e., pesticides, polycyclic aromatic hydrocarbons, antibiotics, and organic dyes has also been discussed. The soil application of biochar has a significant impact on the biodegradation, leaching, and sorption/desorption of organic contaminants. The sorption/desorption of organic contaminants is influenced by chemical composition and structure, porosity, surface area, pH, and elemental ratios, and surface functional groups of biochar. All the above biochar characteristics depend on the type of feedstock and pyrolysis conditions. However, the concentration and nature of organic pollutants significantly alters the sorption capability of biochar. Therefore, the physicochemical properties of biochar and soils/wastewater, and the nature of organic contaminants, should be evaluated before biochar application to soil and wastewater. Future initiatives, however, are needed to develop biochars with better adsorption capacity, and long-term sustainability for use in the xenobiotic/organic contaminant remediation strategy.

Concentration-dependent effects of effusol and juncusol from Juncus compressus on seedling development of Arabidopsis thaliana

Juncus species are valuable sources of phenanthrene compounds that have been used in traditional Chinese medicine for thousands of years. Effusol and juncusol are the most investigated compounds reported to have antimicrobial and anticancer effects; however, to date, their effects on higher plants have not been investigated. In this study, we examined the effects of effusol and juncusol on the growth and other biochemical parameters of the dicot model plant Arabidopsis thaliana in a concentration-dependent manner with a focus on polyamine metabolism. Phenanthrene induced toxic effects on plant growth and development, while effusol and juncusol induced higher biomass and maintained antioxidant defence mechanisms associated with reduced polyamine degradation. Taken together, our results suggest that these compounds could be good candidates for new biopesticide or biostimulant plant growth regulators in the future.

Phenanthrene stress response and phytoremediation potential of free-floating fern Azolla filiculoides Lam

In this study, the potential of Azolla filiculoides, a freshwater fern species, on phenanthrene phytoremediation and biodegradation was investigated. Furthermore, the effect of phenanthrene on growth performance, photosynthetic activity and biosynthesis, and accumulation of secondary metabolites of A. filiculodes were evaluated. Plants were grown in a nitrogen-free Hoagland and exposed to different phenanthrene concentrations (0, 1, 5, and 10 mg/L). Exposure to 10 mg/L phenanthrene caused a significant reduction (42%) in Azolla filiculoides growth compared to control on day 14. The photosynthetic pigment content of A. filiculoides treated with 1 and 5 mg/L was almost the same as the control, while 10 mg/L phenanthrene was significantly reduced. In comparison to unplanted controls, the biodegradation percentages obtained from the planted growth medium were found to be 88, 69, and 60%, respectively, for the application of 1, 5, and 10 mg/L phenanthrene. Data on plant growth, photosynthetic pigments, secondary metabolite contents, and biodegradation percentages indicated the tolerance level and the effective phytoremediation potential of A. filiculoides for phenanthrene was <10 mg/L. The results indicated that A. filiculoides is highly effective in phytoremediation of low concentrations of phenanthrene pollution in a short time.

Biochemical and Metabolic Plant Responses toward Polycyclic Aromatic Hydrocarbons and Heavy Metals Present in Atmospheric Pollution

Heavy metals (HMs) and polycyclic aromatic hydrocarbons (PAHs) are toxic components of atmospheric particles. These pollutants induce a wide variety of responses in plants, leading to tolerance or toxicity. Their effects on plants depend on many different environmental conditions, not only the type and concentration of contaminant, temperature or soil pH, but also on the physiological or genetic status of the plant. The main detoxification process in plants is the accumulation of the contaminant in vacuoles or cell walls. PAHs are normally transformed by enzymatic plant machinery prior to conjugation and immobilization; heavy metals are frequently chelated by some molecules, with glutathione, phytochelatins and metallothioneins being the main players in heavy metal detoxification. Besides these detoxification mechanisms, the presence of contaminants leads to the production of the reactive oxygen species (ROS) and the dynamic of ROS production and detoxification renders different outcomes in different scenarios, from cellular death to the induction of stress resistances. ROS responses have been extensively studied; the complexity of the ROS response and the subsequent cascade of effects on phytohormones and metabolic changes, which depend on local concentrations in different organelles and on the lifetime of each ROS species, allow the plant to modulate its responses to different environmental clues. Basic knowledge of plant responses toward pollutants is key to improving phytoremediation technologies.

PAHs in an urban-industrial area: The role of lichen transplants in the detection of local and study area scale patterns

Spatial variation of the levels of polycyclic aromatic hydrocarbons (PAHs) was evaluated within an urban-industrial district where the main anthropogenic pressures are a 15 MW biomass power plant (BPP) and road traffic. The use of a high-density lichen transplant network and wind quantitative relationships made it possible to perform a hierarchical analysis of contamination. Combined uni-bi and multivariate statistical analyses of the resulting databases revealed a dual pattern. In its surroundings (local scale), the BPP affected the bioaccumulation of fluoranthene, pyrene and total PAHs, although a confounding effect of traffic (mostly petrol/gasoline engines) was evident. Spatial variation of the rate of diesel vehicles showed a significant association with that of acenaphthylene, acenaphthene, fluorene, anthracene and naphthalene. The series of high-speed wind values suggests that wind promotes diffusion rather than dispersion of the monitored PAHs. At the whole study area scale, the BPP was a source of acenaphthylene and acenaphthene, while diesel vehicles were a source of acenaphthylene. PAHs contamination strongly promotes oxidative stress (a threefold increase vs pre-exposure levels) in lichen transplants, suggesting a marked polluting effect of anthropogenic sources especially at the expense of the mycobiont. The proposed monitoring approach could improve the apportionment of the different contributions of point and linear anthropogenic sources of PAHs, mitigating the reciprocal biases affecting their spatial patterns.

ROS-Scavenging Enzymes as an Antioxidant Response to High Concentration of Anthracene in the Liverwort Marchantia polymorpha L

Marchantia polymorpha L. responds to environmental changes using a myriad set of physiological responses, some unique to the lineage related to the lack of a vascular- and root-system. This study investigates the physiological response of M. polymorpha to high doses of anthracene analysing the antioxidant enzymes and their relationship with the photosynthetic processes, as well as their transcriptomic response. We found an anthracene dose-dependent response reducing plant biomass and associated to an alteration of the ultrastructure of a 23.6% of chloroplasts. Despite a reduction in total thallus-chlorophyll of 31.6% of Chl a and 38.4% of Chl b, this was not accompanied by a significant change in the net photosynthesis rate and maximum quantum efficiency (Fv/Fm). However, we found an increase in the activity of main ROS-detoxifying enzymes of 34.09% of peroxidase and 692% of ascorbate peroxidase, supported at transcriptional level with the upregulation of ROS-related detoxifying responses. Finally, we found that M. polymorpha tolerated anthracene-stress under the lowest concentration used and can suffer physiological alterations under higher concentrations tested related to the accumulation of anthracene within plant tissues. Our results show that M. polymorpha under PAH stress condition activated two complementary physiological responses including the activation of antioxidant mechanisms and the accumulation of the pollutant within plant tissues to mitigate the damage to the photosynthetic apparatus.

Dopamine Alleviates Hydrocarbon Stress in Brassica oleracea through Modulation of Physio-Biochemical Attributes and Antioxidant Defense Systems

Hydrocarbon stress has become one of the most restrictive factors for crop choice and productivity in most parts of the world. Dopamine (DA) has positively influenced the metabolic, physiological and biochemical activities besides the growth of plants under numerous abiotic stress conditions. The current study was performed to analyze the potential of DA to alleviate hydrocarbon stress and improve growth of Brassica oleracea plants. Hydrocarbon stress in plants was induced by growing in 5% and 10% crude oil contaminated soil. Crude oil stressed plants exhibited reduced growth besides decreased level of photosynthetic pigments and gas exchange attributes. Moreover, oil stressed plants showed elevated level of hydrogen peroxide (H₂O₂), electrolyte leakage (EL), malondialdehyde (MDA) and superoxide radical (O^2-). However, exogenous application of 50, 100 and 200 μmol L^-1 DA improved photosynthesis, shoot and root dry weight of B. oleracea seedlings growing in hydrocarbon amended soil. Additionally, DA100 treatments improved non-enzymatic and enzymatic antioxidants of treated seedlings. Our results demonstrate that increased gas exchange attributes, modulation of osmoregulators and improved activity of the antioxidative enzymes alleviated hydrocarbon stress in DA supplemented B. oleracea plants. Consequently, the first time observed ameliorative role of DA in hydrocarbon stress opens a new arena for application of this dynamic biomolecule for sustainable crop production.

Anthracene induces oxidative stress and activation of antioxidant and detoxification enzymes in Ulva lactuca (Chlorophyta)

In order to analyze whether the marine macroalga Ulva lactuca can absorb and metabolize anthracene (ANT), the alga was cultivated with 5 µM ANT for 0-72 h, and the level of ANT was detected in the culture medium, and in the alga. The level of ANT rapidly decreased in the culture medium reaching a minimal level at 6 h, and rapidly increased in the alga reaching a maximal level at 12 h and then decreased to reach a minimal level at 48 h of culture. In addition, ANT induced an increase in hydrogen peroxide that remained until 72 h and a higher increase in superoxide anions that reach a maximal level at 24 h and remained unchanged until 72 h, indicating that ANT induced an oxidative stress condition. ANT induced an increase in lipoperoxides that reached a maximal level at 24 h and decreased at 48 h indicating that oxidative stress caused membrane damage. The activity of antioxidant enzymes SOD, CAT, AP, GR and GP increased in the alga treated with ANT whereas DHAR remained unchanged. The level of transcripts encoding these antioxidant enzymes increased and those encoding DHAR did not change. Inhibitors of monooxygenases, dioxygenases, polyphenol oxidases, glutathione-S-transferases and sulfotransferases induced an increase in the level of ANT in the alga cultivated for 24 h. These results strongly suggest that ANT is rapidly absorbed and metabolized in U. lactuca and the latter involves Phase I and II metabolizing enzymes.

Variations of Structural and Functional Traits of Azolla pinnata R. Br. in Response to Crude Oil Pollution in Arid Regions

In oil-producing countries, water pollution by crude petroleum oil frequently occurs and causes many environmental problems. This study aims to investigate the effect of crude petroleum oil on the growth and functional trails of the economically important freshwater plant Azolla pinnata R. Br. and to report on the plant’s resistance to this abiotic stress. Plants were raised in an open greenhouse experiment under different levels of crude oil pollution ranging from 0.5 to 2.0 g/L. Plant functional traits were monitored over a three-week period. Plant cover of A. pinnata was decreased with the increased levels of oil pollution. The total chlorophyll content decreased from 0.76 mg/g fresh weight under 2 g/L oil treatment after 21 days of growth. The chlorophyll a/b ratio exceeded the unity at crude oil treatments above 1 g/L, with values reaching 2.78 after seven days, while after 21 days, the ratio ranged from 1.14 to 1.31. The carotenoid content ranged from 0.17 mg/g in the control to 0.11 mg/g in the 2 g/L oil treatment. The carotenoid content varied over time in relation to DNA% damage, which increased from 3.63% in the control to 11.36% in the highest oil treatment level of 2 g/L. The crude oil stress caused severe damage in the frond tissues and chloroplast structure of A. pinnata, including a less compacted palisade, the malformation of the epidermis, the disintegration of parenchyma tissue, and the lysis and malformation of the chloroplasts. Since A. pinnata cannot withstand high concentrations of crude oil pollution, it is for use in the remediation of slightly polluted freshwaters up to 0.5 g/L.

Sex-Specific Differences in the Toxic Effects of Heavy Fuel Oil on Sea Urchin (Strongylocentrotus intermedius)

The purpose of this study was to explore and compare the sex-specific differences in the toxic effects of water-accommodated fractions of 380# heavy fuel oil (HFO WAF) on the sea urchin Strongylocentrotus intermedius. Sea urchins were acutely exposed to HFO WAF at different nominal concentrations (0%, 10% and 20%) for seven days. The results showed that females had a higher polycyclic aromatic hydrocarbons (PAHs) bioaccumulation in gonad tissues and that both the total antioxidant capacity (TAC) and lipid peroxidation (LPO) levels in the gonad tissues of females were much higher than those of males. The PAHs bioaccumulation in gametes indicated that parents’ exposure could lead to a transfer of PAHs to their offspring, and eggs had higher TAC and LPO than sperms. After maternal and paternal exposure to HFO WAF, the frequency of morphological abnormalities of the offspring was increased when compared to the control. Overall, these results indicated that maternal exposure to HFO WAF could cause more significantly toxic effects on sea urchins than paternal exposure could, which could lead to more significantly negative effects on their offspring.

Biochemical and functional responses of stream invertebrate shredders to post-wildfire contamination

Forests in Mediterranean Europe including Portugal are highly susceptible to wildfires. Freshwaters are often exposed to post-wildfire contamination that contains several toxic substances, which may impose risk to freshwater organisms and ecosystem functions. However, knowledge on the impacts of post-wildfire runoffs from different origins on freshwater biota is scarce. In forest streams, invertebrate shredders have a major contribution to aquatic detrital-based food webs, by translocating energy and nutrients from plant-litter to higher trophic levels. We investigated the leaf consumption behaviour and the responses of oxidative and neuronal stress enzymatic biomarkers in the freshwater invertebrate shredder Allogamus ligonifer after short-term exposure (96 h) to post-wildfire runoff samples from Pinus and Eucalyptus plantation forests and stream water from a burnt catchment in Portugal. Chemical analyses indicated the presence of various metals and PAHs at considerable concentrations in all samples, although the levels were higher in the runoff samples from forests than in the stream water. The shredding activity was severely inhibited by exposure to increased concentrations of post-wildfire runoff samples from both forests. The dose-response patterns of enzymatic biomarkers suggest oxidative and neuronal stress in the shredders upon exposure to increasing concentrations of post-wildfire runoffs. The impacts were more pronounced for the runoffs from the burnt forests. Moreover, the response patterns suggest that the energy from the feeding activity of shredders might have contributed to alleviate the stress in A. ligonifer. Overall, the outcomes suggest that the post-wildfire contamination can induce sublethal effects on invertebrate shredders with impacts on key ecological processes in streams.

Benzopyrene induces oxidative stress and increases expression and activities of antioxidant enzymes, and CYP450 and GST metabolizing enzymes in Ulva lactuca (Chlorophyta)

Benzopyrene is rapidly incorporated and metabolized, and induces oxidative stress and activation of antioxidant enzymes, and CYP450 and GST metabolizing enzymes in Ulva lactuca. To analyze absorption and metabolism of benzo[a]pyrene (BaP) in Ulva lactuca, the alga was cultivated with 5 µM of BaP for 72 h. In the culture medium, BaP level rapidly decreased reaching a minimal level at 12 h and, in the alga, BaP level increased until 6 h, remained stable until 24 h, and decreased until 72 h indicating that BaP is being metabolized in U. lactuca. In addition, BaP induced an initial increase in hydrogen peroxide decreasing until 24 h, superoxide anions level that remained high until 72 h, and lipoperoxides that initially increased and decreased until 72 h, showing that BaP induced oxidative stress. Activities of antioxidant enzymes superoxide dismutase (SOD), catalase (CAT), ascorbate peroxidase (AP), glutathione reductase (GR) and glutathione peroxidase (GP) were increased, whereas dehydroascorbate reductase (DHAR) activity was unchanged. The level of transcripts encoding these antioxidant enzymes was increased, but transcripts encoding DHAR remained unchanged. Interestingly, the activity of glutathione-S-transferase (GST) was also increased, and inhibitors of cytochrome P450 (CYP450) and GST activities enhanced the level of BaP in algal tissue, suggesting that these enzymes participate in BaP metabolism.

Study on removal of pyrene by Agropyron cristatum L. in pyrene-Ni co-contaminated soil

Heavy metals and polycyclic aromatic hydrocarbons (PAHs) co-contamination in the soil is widespread. Phytoremediation is often used to remediate co-contaminated soil, but few studies focused on the effects of nickel on the dissipation and uptake of pyrene in phytoremediation. The dissipation of pyrene, the uptake, and distribution of pyrene in Agropyron cristatum L. (A. cristatum) were investigated in this study in the presence of nickel. The pyrene removal rate in single pyrene-contaminated soil with A. cristatum cultivation (48.97%) was the highest, which was higher than that of the co-contamination (47.88%). This was due to the high soil microbial activity and high dissolved organic matter (DOM) contents. In single pyrene-contaminated soil, pyrene was mainly accumulated in the soluble fraction in shoots and on the cell wall in roots of A. cristatuma. Besides, nickel could promote the adsorption of pyrene on the cell wall. Pyrene in A. cristatum could be transported through the apoplast and symplast, and the pyrene contents in the symplast were 2-3 times that of the apoplast. The uptake of pyrene by A. cristatum included both active absorption and passive transportation. Active absorption involved H⁺ transport and energy conversion processes, and passive transport was associated with water protein channels.

Toxicities of polystyrene nano- and microplastics toward marine bacterium Halomonas alkaliphila

Nano- and microplastics have been shown to cause negative effects on marine organisms. However, the toxicities of nano- and microplastics toward marine bacteria are poorly understood. In this study, we investigated the toxic effects of polystyrene nano- and microplastics on the marine bacterium Halomonas alkaliphila by determining growth inhibition, chemical composition, inorganic nitrogen conversion efficiencies and reactive oxygen species (ROS) generation. The results showed that both nano- and microplastics inhibited the growth of H. alkaliphila in high concentrations, while nanoplastics rather than microplastics influenced the growth inhibition, chemical composition and ammonia conversion efficiencies of H. alkaliphila at concentration of 80 mg/L. The ROS generation indicated oxidative stress induced by nano- but not microplastics, and the oxidative stress induced by nanoplastics may provide a significant effect on bacteria. Furthermore, the positively charged nanoplastics (amine-modified 50 nm) induced higher oxidative stress toward bacteria than that induced by negatively charged nanoplastics (non-modified 55 nm). The increased extracellular polymeric substances as evidenced by transmission electron microscope (TEM) observation suggested the possible bacterial protective mechanisms. The present study illustrates for the first time the impact of plastics debris on the inorganic nitrogen conversion efficiencies of marine bacteria. Our findings highlight the effects of microplastics on the ecological function of marine organisms.

Comparative transcriptome analysis of Zea mays in response to petroleum hydrocarbon stress

The use of plants for the improvement of soils contaminated with hydrocarbons has been a primary research focus in phytoremediation studies. Obtaining insights regarding genes that are differentially induced by petroleum hydrocarbon stress and understanding plant response mechanisms against petroleum hydrocarbons at molecular level is essential for developing better phytoremediation strategies to remove these hazardous contaminants. The purpose of this study was to analyze the transcriptomal profile changes under hydrocarbon stress in maize plants and identify the genes associated with the phytoremediative capacity. Zea mays GeneChips were used to analyze the global transcriptome profiles of maize treated with different concentrations of petroleum hydrocarbons. In total, 883, 1281, and 2162 genes were differentially induced or suppressed in the comparisons of 0 (control) vs. 1% crude petroleum, 1 vs. 5% crude petroleum, and 0 vs. 5% crude petroleum, respectively. The differentially expressed genes were functionally associated with the osmotic stress response mechanism, likely preventing the uptake of water from the roots, and the phytoremediative capacity of plants, e.g., secretory pathway genes. The results presented here show the regulatory mechanisms in the response to petroleum hydrocarbon pollution in soil. Our study provides global gene expression data of Z. mays in response to petroleum hydrocarbon stress that could be useful for further studies investigating the biodegradation mechanism in maize and other plants.

Carotenoid and superoxide dismutase are the most effective antioxidants participating in ROS scavenging in phenanthrene accumulated wheat leaf

Polycyclic aromatic hydrocarbons (PAHs) are a kind of pollutants which could stimulate stress reaction in plant cells. In this study, we systematically verify that PAHs could induce an oxidative stress in plants, and describe their damages on wheat leaf subcellular structure and organelle, together with the contributions of antioxidants working against reactive oxygen species. The observation of transmission electron microscope exhibits that cell structures become plasmolyzed and distorted, and organelles disappear under phenanthrene (a model PAH) treatments. Osmiophilic granules arise with increasing phenanthrene concentrations, displaying the evidence for oxidative stress. As more H₂O₂ produce, and the accumulation of H₂O₂ is a fatal reason for cell death under PAH treatments. Through cluster analysis, Pearson correlation coefficient, principal component analysis and redundancy analysis, carotenoid and superoxide dismutase are the two most effective antioxidants to scavenge superoxide radicals among nine major antioxidants (ascorbate, glutathione, polyamines, α-tocopherol, carotenoid, catalases, ascorbate peroxidase, superoxide dismutase and glutathione-S-transferase), glutathione-S-transferase is a potential antioxidant, and Asa-GSH cycle would turn active under higher phenanthrene treatments. Ascorbate peroxidase and α-tocopherol would cause leaf moisture increase. Thus, this work provides better comprehension on the antioxidant performances and their potential application to improving plants' resistance under PAH pollution in the environment.

Detoxification of polycyclic aromatic hydrocarbons (PAHs) in Arabidopsis thaliana involves a putative flavonol synthase

Polycyclic aromatic hydrocarbons (PAHs) are environmental contaminants with cytotoxic, teratogenic and carcinogenic properties. Bioremediation studies with bacteria have led to the identification of dioxygenases (DOXs) in the first step to degrade these recalcitrant compounds. In this study, we characterized the role of the Arabidopsis thaliana AT5G05600, a putative DOX of the flavonol synthase family, in the transformation of PAHs. Phenotypic analysis of loss-of-function mutant lines showed that these plant lines were less sensitive to the toxic effects of phenanthrene, suggesting possible roles of this gene in PAH degradation in vivo. Interestingly, these mutant lines showed less accumulation of H₂O₂ after PAH exposure. Transgenic lines over-expressing At5g05600 showed a hypersensitive response and more oxidative stress after phenanthrene treatments. Moreover, fluorescence spectra results of biochemical assays with the recombinant His-tagged protein AT5G05600 detected chemical modifications of phenanthrene. Taken together, these results support the hypothesis that AT5G05600 is involved in the catabolism of PAHs and the accumulation of toxic intermediates during PAH biotransformation in plants. This research represents the first step in the design of transgenic plants with the potential to degrade PAHs, leading to the development of vigorous plant varieties that can reduce the levels of these pollutants in the environment.

Dietary pollutants induce oxidative stress, altering maternal antioxidant provisioning and reproductive output in the temperate sea urchin Evechinus chloroticus

Evidence is growing to suggest that the capacity to withstand oxidative stress may play an important role in shaping life-history trade-offs, although little is known on the relationship in broadcast spawning marine invertebrates. In this group, variation in gamete quantity and quality are important drivers of offspring survival and successful recruitment. Therefore the provisioning of eggs with antioxidants may be an important driver of life history strategies because they play a critical role in preventing damage from reactive oxygen species to macromolecules. In this study, a suite of oxidative stress biomarkers was measured in the gonads and eggs of the sea urchin Evechinus chloroticus exposed to polycyclic aromatic hydrocarbons (PAHs). Links between oxidative stress markers and core components of fitness including fecundity, gamete quality and maternal transfer of antioxidants were assessed. Experimental induction of oxidative stress was achieved via exposure to a mix of four PAHs over a 21-day period. In PAH exposed individuals, we observed a significant upregulation of the antioxidant defence and detoxification enzymes SOD, CAT, GR, GPx and GST, as well as a greater pool of the non-enzymatic antioxidant glutathione in gonad tissue and eggs. In contrast, glutathione redox status was not affected by PAH exposure, with the percentage of reduced glutathione remaining at approximately 80% in both gonad tissue and released eggs. PAH-exposed adults experienced greater than three- and five-fold increases in oxidative protein and lipid damage, respectively, in gonad tissue. In contrast, eggs maintained low levels of damage, not differing from baseline levels found in eggs released from PAH-naïve mothers. PAH exposure also resulted in a 2-fold reduction in fecundity of reproductively mature females but no significant alteration to egg diameter. Although PAH-exposed females released fewer eggs, successful fertilisation of those eggs was slightly enhanced with average rates ranging from 90-99% in comparison to 76-90% in control eggs. Early-stage offspring reflected maternal antioxidant status with populations derived from PAH-exposed mothers demonstrating significantly higher antioxidant levels than those derived from PAH-naïve mothers. This maternally inherited protection enhanced the capacity of embryos to minimise oxidative damage to lipids and proteins during early development but, despite this, did not reduce the proportion of morphological abnormalities in the population. Overall, these findings indicate that when faced with short-term contaminant stress E. chloroticus has the capacity to trade high reproductive output during a spawning event for a greater antioxidant investment in eggs. However, this production of potentially more resilient offspring did not translate to a fitness gain, at least for the early larval stages in the present experimental conditions.

Pollutant resilience in embryos of the Antarctic sea urchin Sterechinus neumayeri reflects maternal antioxidant status

Legacy pollutants, including polycyclic aromatic hydrocarbons (PAHs) and metals, can occur in high concentrations in some Antarctic marine environments, particularly near scientific research stations. Oxidative stress is an important unifying feature underlying the toxicity of many chemical contaminants to aquatic organisms. However, the potential impacts of pollutants on the oxidative physiology of Antarctic marine invertebrates are not well documented. Sterechinus neumayeri is a common animal in the shallow subtidal benthos surrounding Antarctica, and is considered an important keystone species. The aim of the present study was to collect baseline oxidative biomarker data for S. neumayeri and to investigate the impacts of field exposure to chemical contaminants on gamete health and parent-to-offspring transfer of oxidative stress resilience. We analysed antioxidant enzyme activities, levels of the molecular antioxidant glutathione, protein carbonylation, lipid peroxidation and levels of 8-OHdG as oxidative stress biomarkers in S. neumayeri from a contaminant-impacted site near McMurdo Station and a relatively pristine site at Cape Evans. Biomarkers were analysed in adult gamete tissue and in early stage embryos exposed to AN8 fuel oil. PAHs were quantified as a proxy for contamination and were found to be elevated in urchins from the contaminated site (up to 231.67ng/g DW). These contaminant-experienced adult urchins produced eggs with greater levels of a broad suite of antioxidants, particularly superoxide dismutase, catalase and glyoxalase-I, than those from Cape Evans. In addition, embryos that were derived from contaminant-experienced mothers were endowed with higher baseline levels of antioxidants, which conferred an enhanced capacity to minimize oxidative damage to lipids, proteins and DNA when exposed to AN8 fuel. This pattern was strongest following exposure to 900ppm AN8, where lipid and protein damage was 5-7 times greater than baseline levels in contaminant-naïve female embryos in comparison to 3-4 times greater in contaminant-experienced female embryos. Despite this inherited resilience against oxidative stress, abnormal development was as high in these embryos when exposed to AN8 as in those derived from contaminant-naïve mothers (up to 80% abnormality), implying the conferred advantage may not translate to a fitness or survival gain, at least up to the blastulae stage. Our findings document the first evidence for parent-to-offspring transfer of oxidative stress resilience in an Antarctic marine invertebrate.

Stress signaling in response to polycyclic aromatic hydrocarbon exposure in Arabidopsis thaliana involves a nucleoside diphosphate kinase, NDPK-3

The study is the first to reveal the proteomic response in plants to a single PAH stress, and indicates that NDPK3 is a positive regulator in the Arabidopsis response to phenanthrene stress. Polycyclic aromatic hydrocarbons (PAHs) are highly carcinogenic pollutants that are byproducts of carbon-based fuel combustion, and tend to persist in the environment for long periods of time. PAHs elicit complex, damaging responses in plants, and prior research at the physiological, biochemical, and transcriptional levels has indicated that reactive oxygen species (ROS) and oxidative stress play major roles in the PAH response. However, the proteomic response has remained largely unexplored. This study hypothesized that the proteomic response in Arabidopsis thaliana to phenanthrene, a model PAH, would include a strong oxidative stress signature, and would provide leads to potential signaling molecules involved. To explore that proteomic signature, we performed 2D-PAGE experiments and identified 30 proteins levels that were significantly altered including catalases (CAT), ascorbate peroxidase (APX), peroxiredoxins (POD), glutathione-S-transferase, and glutathione reductase. Also upregulated was nucleoside diphosphate kinase 3 (NDPK-3), a protein known to have metabolic and stress signaling functions. To address whether NDPK-3 functions upstream of the oxidative stress response, we measured levels of stress-responsive enzymes in NDPK-3 overexpressor, loss-of-function knockout, and wild-type plant lines. In the NDPK-3 overexpressor, the enzyme activities of APX, CAT, POD, as well as superoxide dismutase were all increased compared to wild type; in the NDPK-3 knockout line, these enzymes had reduced activity. This pattern occurred in untreated as well as phenanthrene-treated plants. These data support a model in which NDPK-3 is a positive regulator of the Arabidopsis stress response to PAHs.

Phytoremediation of phenanthrene by transgenic plants transformed with a naphthalene dioxygenase system from Pseudomonas

Genes from microbes for degrading polycyclic aromatic hydrocarbons (PAHs) are seldom used to improve the ability of plants to remediate the pollution because the initiation of the microbial degradation of PAHs is catalyzed by a multienzyme system. In this study, for the first time, we have successfully transferred the complex naphthalene dioxygenase system of Pseudomonas into Arabidopsis and rice, the model dicot and monocot plant. As in bacteria, all four genes of the naphthalene dioxygenase system can be simultaneously expressed and assembled to an active enzyme in transgenic plants. The naphthalene dioxygenase system can develop the capacity of plants to tolerate a high concentration of phenanthrene and metabolize phenanthrene in vivo. As a result, transgenic plants showed improved uptake of phenanthrene from the environment over wild-type plants. In addition, phenanthrene concentrations in shoots and roots of transgenic plants were generally lower than that of wild type plants. Transgenic plants with a naphthalene dioxygenase system bring the promise of an efficient and environmental-friendly technology for cleaning up PAHs contaminated soil and water.

Metabolic engineering of Arabidopsis for remediation of different polycyclic aromatic hydrocarbons using a hybrid bacterial dioxygenase complex

The widespread presence of polycyclic aromatic hydrocarbons (PAHs) and their potential harm to various organisms has generated interest in efficiently eliminating these compounds from the environment. Phytoremediation is an efficient technology for cleaning up pollutants. However, unlike microorganisms, plants lack the catabolic pathway for complete degradation of these dangerous groups of compounds. One way to enhance the potential of plants for remediation of these compounds is by transferring genes involved in xenobiotic degradation from microbes to plants. In this paper, four genes, namely nidA and nidB (encoding the large and small subunits of naphthalene dioxygenase of Mycobacterium vanbaalenii PYR-1) as well as NahAa and NahAb (encoding flavoprotein reductase and ferredoxin of the electron-transport chain of the Pseudomonas putida G7 naphthalene dioxygenase system), were transferred and ectopically expressed in Arabidopsis thaliana. Transgenic Arabidopsis plants overexpressing the heterozygous naphthalene dioxygenase system exhibited enhanced tolerance toward 2-4 rings PAHs. Transgenic plants assimilated PAHs from the culture media faster and accumulated less in vivo than wild-type plants. Furthermore, examination of metabolic intermediates by gas chromatography-mass spectrometry revealed that the naphthalene metabolic pathway in transgenic plants mainly involves the dioxygenase pathway. Taken together, our findings suggest that grafting the naphthalene dioxygenase complex into plants is a possible strategy to breed PAH-tolerant plants to efficiently degrade PAHs in the environment.

Regulation of polyamine metabolism in Pyropia cinnamomea (W.A. Nelson), an important mechanism for reducing UV-B-induced oxidative damage

It is generally accepted that ultraviolet (UV) radiation can have adverse affects on phototrophic organisms, independent of ozone depletion. The red intertidal seaweed Pyropia cinnamomea W.A. Nelson (previously Porphyra cinnamomea Sutherland et al. 2011), similar to many other intertidal macrophytes, is exposed to high levels of UV radiation on a daily basis due to emersion in the upper littoral zone. It has been shown that seaweeds, like higher plants, respond to an increased activity of antioxidative enzymes when exposed to stress. However, earlier investigations have shown that P. cinnamomea also compensates for stress due to UV radiation by increasing polyamine (PA) levels, especially bound-soluble and bound-insoluble PAs. The PA precursor putrescine (PUT) can be synthesized via two enzymatic pathways: arginine decarboxylase (ADC) and ornithine decarboxylase (ODC). Both of these enzymes showed increased activity in P. cinnamomea under UV stress. In higher plants, ADC is the enzyme responsible for increased PA levels during stress exposure, while ODC is correlated with cell division and reproduction. However, there are contrary findings in the literature. Using two irreversible inhibitors, we identified the enzyme most likely responsible for increased PUT synthesis and therefore increased stress tolerance in P. cinnamomea. Our results show that changes in the PA synthesis pathway in P. cinnamomea under UV stress are based on an increased activity of ADC. When either inhibitor was added, lipid hydroperoxide levels increased even under photosynthetically active radiation, suggesting that PAs are involved in protection mechanisms under normal light conditions as well. We also show that under optimum or low-stress conditions, ODC activity is correlated with PUT synthesis.

Challenges in tracing the fate and effects of atmospheric polycyclic aromatic hydrocarbon deposition in vascular plants

Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous organic pollutants that raise environmental concerns because of their toxicity. Their accumulation in vascular plants conditions harmful consequences to human health because of their position in the food chain. Consequently, understanding how atmospheric PAHs are taken up in plant tissues is crucial for risk assessment. In this review we synthesize current knowledge about PAH atmospheric deposition, accumulation in both gymnosperms and angiosperms, mechanisms of transfer, and ecological and physiological effects. PAHs emitted in the atmosphere partition between gas and particulate phases and undergo atmospheric deposition on shoots and soil. Most PAH concentration data from vascular plant leaves suggest that contamination occurs by both direct (air-leaf) and indirect (air-soil-root) pathways. Experimental studies demonstrate that PAHs affect plant growth, interfering with plant carbon allocation and root symbioses. Photosynthesis remains the most studied physiological process affected by PAHs. Among scientific challenges, identifying specific physiological transfer mechanisms and improving the understanding of plant-symbiont interactions in relation to PAH pollution remain pivotal for both fundamental and applied environmental sciences.

The organophosphate insecticide Coumaphos induces oxidative stress and increases antioxidant and detoxification defences in the green macroalgae Ulva pertusa

It is well established that many pesticides used in the farming and horticultural industries are harmful to not only the target species they were developed for, but also other organisms. Organophosphates were introduced as a replacement for the organochlorines and are generally considered non-toxic to plants and algae. This study investigated the impact of Coumaphos, a commonly used organophosphate, on the estuarine macrophyte Ulva pertusa. In a seven-day experiment U. pertusa cultures were exposed to four environmentally relevant concentrations of Coumaphos (0.01 mg/L, 0.05 mg/L, 0.1mg/L, 0.5 mg/L), well below the aqueous solubility maximum of the insecticide. The impact of Coumaphos was determined at a cellular level by assessing oxidative damage in the form of protein carbonyl and lipid hydroperoxide levels. Furthermore, non-enzymatic antioxidant levels and changes in the levels of enzymatic antioxidants and the enzyme GST were measured. Concentrations of Coumaphos above 0.01 mg/L caused rapid increases in the levels of protein carbonyls and lipid hydroperoxides peaking after 2-3 days of exposure, followed by a rapid decline in both markers of oxidative stress. Glutathione levels and the activities SOD, CAT, GR, APOX and GST all increased in response to the higher concentrations of Coumaphos tested and remained elevated for the duration of the experiment. These results demonstrate that environmentally relevant levels of the insecticide Coumaphos can cause oxidative damage and increase the antioxidant scavenging capacity, and GST activity in U. pertusa. This could potentially alter resource allocation within this alga, impacting algal growth and development, with possible indirect ecological consequences.

Effects of ultraviolet radiation on an intertidal trematode parasite: an assessment of damage and protection

Trematode parasites are integral components of intertidal ecosystems which experience high levels of ultraviolet radiation. Although these parasites mostly live within hosts, their life cycle involves free-living larval transmission stages such as cercariae which are directly exposed to ambient conditions. UV has previously been shown to considerably reduce the survival of cercariae. Here, we investigated potential mechanisms of protection and damage related to UV in the intertidal trematode Maritrema novaezealandensis. Firstly, the presence of sunscreen compounds (i.e. mycosporine-like amino acids) was quantified in the parasite tissue producing cercariae within a snail host, as well as in the free-swimming cercariae themselves. Secondly, levels of oxidative stress in cercariae after exposure to UV were investigated (i.e.protein carbonyls, catalase and superoxide dismutase). Thirdly, the DNA damage (i.e. cyclobutane–pyrimidine dimers) was compared between cercariae exposed and not exposed to UV. Lastly, functional aspects(survival and infectivity) of cercariae were assessed, comparing cercariae under light conditions versus dark after exposure to UV. We confirmed the presence of my cosporine-like amino acids in cercariae-producing tissue from within snail hosts, but were unable to do so in cercariae directly. Results further suggested that exposure to UV induced high levels of oxidative stress in cercariae which was accompanied by a reduction in the levels of protective antioxidant enzymes present. We also identified higher levels of DNA damage in cercariae exposed to UV, compared with those not exposed. Moreover, no clear effect of light condition was found on survival and infectivity of cercariae after exposure to UV. We concluded that cercariae are highly susceptible to UV damage and that they have very little scope for protection against or repair of UV-induced damage.

Stress responses to phenol in Arabidopsis and transcriptional changes revealed by microarray analysis

Phenols are toxic, environmentally persistent products of the chemical industry that are capable of bioaccumulation and biomagnifications in the food chain. Little is known of how plants respond to this compound. To understand the transcriptional changes under phenol, microarray experiments on Arabidopsis thaliana were performed. Microarray results revealed numerous perturbations in signaling and metabolic pathways. The results indicated that the phenol response was related to reactive oxygen species (ROS) accumulation and oxidative conditions, including ROS generated for pathogen defense.

Atmospheric phenanthrene pollution modulates carbon allocation in red clover (Trifolium pratense L.)

The influence of atmospheric phenanthrene (PHE) exposure (160 μg m(-3)) during one month on carbon allocation in clover was investigated by integrative (plant growth analysis) and instantaneous (13)CO(2) pulse-labelling approaches. PHE exposure diminished plant growth parameters (relative growth rate and net assimilation rate) and disturbed photosynthesis (carbon assimilation rate and chlorophyll content), leading to a 25% decrease in clover biomass. The root-shoot ratio was significantly enhanced (from 0.32 to 0.44). Photosynthates were identically allocated to leaves while less allocated to stems and roots. PHE exposure had a significant overall effect on the (13)C partitioning among clover organs as more carbon was retained in leaves at the expense of roots and stems. The findings indicate that PHE decreases root exudation or transfer to symbionts and in leaves, retains carbon in a non-structural form diverting photosynthates away from growth and respiration (emergence of an additional C loss process).

Ultraviolet radiation and echinoderms: past, present and future perspectives

There is general consensus that solar ultraviolet radiation (UVR) negatively impacts many marine species. Echinoderms are ubiquitous within the marine environment, with members of the phyla often long-lived and numerically dominant within the benthic macrofauna, consequently the impact of UVR on the population dynamics of these organisms will influence marine communities and ecosystems. Research to date has shown that exposure of echinoderms to solar UVR can, affect reproduction and development, change behaviour, cause numerous biochemical and physiological changes and potentially cause increased mutation rates, by causing DNA damage. There is also considerable evidence that echinoderms utilise several different mechanisms to protect themselves against excessive UVR and subsequent UVR-induced damage. However, these protective mechanisms may pose conflicting selection pressures on echinoderms, as UVR is an additional stressor in oceans subjected to anthropogenic-induced climate change. This review summarises our knowledge of the effects of UVR on the Echinodermata. We outline the research conducted to date, highlight key studies on UVR that have utilised echinoderms and look to the future of UVR research in a rapidly changing ocean.

Sea ice protects the embryos of the Antarctic sea urchin Sterechinus neumayeri from oxidative damage due to naturally enhanced levels of UV-B radiation

The ‘ozone hole’ has caused an increase in ultraviolet B radiation (UV-B, 280–320 nm) penetrating Antarctic coastal marine ecosystems, however the direct effect of this enhanced UV-B on pelagic organisms remains unclear. Oxidative stress, the in vivo production of reactive oxygen species to levels high enough to overcome anti-oxidant defences, is a key outcome of exposure to solar radiation, yet to date few studies have examined this physiological response in Antarctic marine species in situ or in direct relation to the ozone hole. To assess the biological effects of UV-B, in situ experiments were conducted at Cape Armitage in McMurdo Sound, Antarctica (77.06°S, 164.42°E) on the common Antarctic sea urchin Sterechinus neumayeri Meissner (Echinoidea) over two consecutive 4-day periods in the spring of 2008 (26–30 October and 1–5 November). The presence of the ozone hole, and a corresponding increase in UV-B exposure, resulted in unequivocal increases in oxidative damage to lipids and proteins, and developmental abnormality in embryos of S. neumayeri growing in open waters. Results also indicate that embryos have only a limited capacity to increase the activities of protective antioxidant enzymes, but not to levels sufficient to prevent severe oxidative damage from occurring. Importantly, results show that the effect of the ozone hole is largely mitigated by sea ice coverage. The present findings suggest that the coincidence of reduced stratospheric ozone and a reduction in sea ice coverage may produce a situation in which significant damage to Antarctic marine ecosystems may occur.

Transcriptional responses to polycyclic aromatic hydrocarbon-induced stress in Arabidopsis thaliana reveal the involvement of hormone and defense signaling pathways

BACKGROUND

Polycyclic aromatic hydrocarbons (PAHs) are toxic, widely-distributed, environmentally persistent, and carcinogenic byproducts of carbon-based fuel combustion. Previously, plant studies have shown that PAHs induce oxidative stress, reduce growth, and cause leaf deformation as well as tissue necrosis. To understand the transcriptional changes that occur during these processes, we performed microarray experiments on Arabidopsis thaliana L. under phenanthrene treatment, and compared the results to published Arabidopsis microarray data representing a variety of stress and hormone treatments. In addition, to probe hormonal aspects of PAH stress, we assayed transgenic ethylene-inducible reporter plants as well as ethylene pathway mutants under phenanthrene treatment.

RESULTS

Microarray results revealed numerous perturbations in signaling and metabolic pathways that regulate reactive oxygen species (ROS) and responses related to pathogen defense. A number of glutathione S-transferases that may tag xenobiotics for transport to the vacuole were upregulated. Comparative microarray analyses indicated that the phenanthrene response was closely related to other ROS conditions, including pathogen defense conditions. The ethylene-inducible transgenic reporters were activated by phenanthrene. Mutant experiments showed that PAH inhibits growth through an ethylene-independent pathway, as PAH-treated ethylene-insensitive etr1-4 mutants exhibited a greater growth reduction than WT. Further, phenanthrene-treated, constitutive ethylene signaling mutants had longer roots than the untreated control plants, indicating that the PAH inhibits parts of the ethylene signaling pathway.

CONCLUSIONS

This study identified major physiological systems that participate in the PAH-induced stress response in Arabidopsis. At the transcriptional level, the results identify specific gene targets that will be valuable in finding lead compounds and engineering increased tolerance. Collectively, the results open a number of new avenues for researching and improving plant resilience and PAH phytoremediation.