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For: Shen Y, Zhang Y, Chen J, Lin H, Zhao M, Peng H, Liu L, Yuan G, Zhang S, Zhang Z, Pan G. Genome expression profile analysis reveals important transcripts in maize roots responding to the stress of heavy metal Pb. Physiol Plant 2013;147:270-82. [PMID: 22747913 DOI: 10.1111/j.1399-3054.2012.01670.x] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2012] [Accepted: 06/06/2012] [Indexed: 05/10/2023]
Number Cited by Other Article(s)
1
Zhang X, Li M, Ma X, Jin X, Wu X, Zhang H, Guan Z, Fu Z, Chen S, Wang P. Transcriptomics Combined with Physiology and Metabolomics Reveals the Mechanism of Tolerance to Lead Toxicity in Maize Seedling. PHYSIOLOGIA PLANTARUM 2024;176:e14547. [PMID: 39327540 DOI: 10.1111/ppl.14547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2024] [Revised: 07/21/2024] [Accepted: 08/12/2024] [Indexed: 09/28/2024]
2
Lou T, Lv S, Wang J, Wang D, Lin K, Zhang X, Zhang B, Guo Z, Yi Z, Li Y. Cell size and xylem differentiation regulating genes from Salicornia europaea contribute to plant salt tolerance. PLANT, CELL & ENVIRONMENT 2024;47:2640-2659. [PMID: 38558078 DOI: 10.1111/pce.14905] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Revised: 03/12/2024] [Accepted: 03/15/2024] [Indexed: 04/04/2024]
3
Ur Rahman S, Qin A, Zain M, Mushtaq Z, Mehmood F, Riaz L, Naveed S, Ansari MJ, Saeed M, Ahmad I, Shehzad M. Pb uptake, accumulation, and translocation in plants: Plant physiological, biochemical, and molecular response: A review. Heliyon 2024;10:e27724. [PMID: 38500979 PMCID: PMC10945279 DOI: 10.1016/j.heliyon.2024.e27724] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 02/17/2024] [Accepted: 03/06/2024] [Indexed: 03/20/2024]  Open
4
Zheng Z, Gao J, Wang C, Peng H, Zeng J, Chen F. Genome-wide identification and expression pattern analysis of the MATE gene family in carmine radish (Raphanus sativus L.). Gene 2023;887:147734. [PMID: 37625557 DOI: 10.1016/j.gene.2023.147734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Revised: 08/09/2023] [Accepted: 08/22/2023] [Indexed: 08/27/2023]
5
Ilyas MZ, Sa KJ, Ali MW, Lee JK. Toxic effects of lead on plants: integrating multi-omics with bioinformatics to develop Pb-tolerant crops. PLANTA 2023;259:18. [PMID: 38085368 DOI: 10.1007/s00425-023-04296-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2023] [Accepted: 11/15/2023] [Indexed: 12/18/2023]
6
Lu Y, Peng F, Wang Y, Yang Z, Li H. Transcriptomic analysis reveals the molecular mechanisms of Boehmeria nivea L. in response to antimonite and antimonate stresses. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023;343:118195. [PMID: 37229860 DOI: 10.1016/j.jenvman.2023.118195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2023] [Revised: 05/14/2023] [Accepted: 05/15/2023] [Indexed: 05/27/2023]
7
Gao PP, Liang H, Dong Y, Xue PY, Zhao QL, Yan JS, Ma W, Zhao JJ, Liu WJ. Transcriptomic mechanisms of reduced PM2.5-Pb retention in the leaves of the low-Pb-accumulation genotype of Chinese cabbage. JOURNAL OF HAZARDOUS MATERIALS 2023;444:130385. [PMID: 36403447 DOI: 10.1016/j.jhazmat.2022.130385] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Revised: 11/07/2022] [Accepted: 11/09/2022] [Indexed: 06/16/2023]
8
Zhang J, Zhang H, Wang P, Chen J, Cao Y. Gene Expression, Hormone Signaling, and Nutrient Uptake in the Root Regermination of Grafted Watermelon Plants with Different Pumpkin Rootstocks. JOURNAL OF PLANT GROWTH REGULATION 2023;42:1051-1066. [PMID: 0 DOI: 10.1007/s00344-022-10613-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Accepted: 01/19/2022] [Indexed: 05/20/2023]
9
Li Z, Jiang L, Wang C, Liu P, Ma L, Zou C, Pan G, Shen Y. Combined genome-wide association study and gene co-expression network analysis identified ZmAKINβγ1 involved in lead tolerance and accumulation in maize seedlings. Int J Biol Macromol 2023;226:1374-1386. [PMID: 36455818 DOI: 10.1016/j.ijbiomac.2022.11.250] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Revised: 11/15/2022] [Accepted: 11/22/2022] [Indexed: 11/29/2022]
10
Hou F, Zhang N, Ma L, An L, Zhou X, Zou C, Yang C, Pan G, Lübberstedt T, Shen Y. ZmbZIP54 and ZmFDX5 cooperatively regulate maize seedling tolerance to lead by mediating ZmPRP1 transcription. Int J Biol Macromol 2023;224:621-633. [PMID: 36273546 DOI: 10.1016/j.ijbiomac.2022.10.151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Revised: 09/14/2022] [Accepted: 10/17/2022] [Indexed: 11/05/2022]
11
Yao L, Wang J, Yang K, Hu N, Li B, Meng Y, Ma X, Si E, Shang X, Wang H. Proteomic analysis reveals molecular mechanism of Cd2+ tolerance in the leaves of halophyte Halogeton glomeratus. J Proteomics 2022;269:104703. [PMID: 36084920 DOI: 10.1016/j.jprot.2022.104703] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Revised: 07/30/2022] [Accepted: 08/01/2022] [Indexed: 11/24/2022]
12
Wang Y, Liu L, Pu X, Ma C, Qu H, Wei M, Zhang K, Wu Q, Li C. Transcriptome Analysis and SNP Identification Reveal That Heterologous Overexpression of Two Uncharacterized Genes Enhances the Tolerance of Magnaporthe oryzae to Manganese Toxicity. Microbiol Spectr 2022;10:e0260521. [PMID: 35638819 PMCID: PMC9241697 DOI: 10.1128/spectrum.02605-21] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Accepted: 04/20/2022] [Indexed: 11/20/2022]  Open
13
Ma L, An R, Jiang L, Zhang C, Li Z, Zou C, Yang C, Pan G, Lübberstedt T, Shen Y. Effects of ZmHIPP on lead tolerance in maize seedlings: Novel ideas for soil bioremediation. JOURNAL OF HAZARDOUS MATERIALS 2022;430:128457. [PMID: 35180524 DOI: 10.1016/j.jhazmat.2022.128457] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Revised: 01/28/2022] [Accepted: 02/07/2022] [Indexed: 05/19/2023]
14
Munsif F, Kong X, Khan A, Shah T, Arif M, Jahangir M, Akhtar K, Tang D, Zheng J, Liao X, Faisal S, Ali I, Iqbal A, Ahmad P, Zhou R. Identification of differentially expressed genes and pathways in isonuclear kenaf genotypes under salt stress. PHYSIOLOGIA PLANTARUM 2021;173:1295-1308. [PMID: 33135207 DOI: 10.1111/ppl.13253] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2020] [Revised: 05/27/2020] [Accepted: 10/21/2020] [Indexed: 06/11/2023]
15
Zhang J, Xiao Q, Wang P. Phosphate-solubilizing bacterium Burkholderia sp. strain N3 facilitates the regulation of gene expression and improves tomato seedling growth under cadmium stress. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021;217:112268. [PMID: 33930768 DOI: 10.1016/j.ecoenv.2021.112268] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Revised: 04/11/2021] [Accepted: 04/16/2021] [Indexed: 06/12/2023]
16
Hou F, Zhou X, Liu P, Yuan G, Zou C, Lübberstedt T, Pan G, Ma L, Shen Y. Genetic dissection of maize seedling traits in an IBM Syn10 DH population under the combined stress of lead and cadmium. Mol Genet Genomics 2021;296:1057-1070. [PMID: 34117523 DOI: 10.1007/s00438-021-01800-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 05/27/2021] [Indexed: 10/21/2022]
17
Wang Y, Meng Y, Mu S, Yan D, Xu X, Zhang L, Xu B. Changes in phenotype and gene expression under lead stress revealed key genetic responses to lead tolerance in Medicago sativa L. Gene 2021;791:145714. [PMID: 33979680 DOI: 10.1016/j.gene.2021.145714] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2021] [Revised: 04/28/2021] [Accepted: 05/06/2021] [Indexed: 10/21/2022]
18
Pb Stress and Ectomycorrhizas: Strong Protective Proteomic Responses in Poplar Roots Inoculated with Paxillus involutus Isolate and Characterized by Low Root Colonization Intensity. Int J Mol Sci 2021;22:ijms22094300. [PMID: 33919023 PMCID: PMC8122328 DOI: 10.3390/ijms22094300] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Revised: 04/16/2021] [Accepted: 04/18/2021] [Indexed: 01/11/2023]  Open
19
Tawab F, Munir I, Nasim Z, Khan MS, Tawab S, Nasim A, Iqbal A, Ahmad MA, Ali W, Munir R, Munir M, Asim N. Identification and characterization of a novel multi-stress responsive gene in Arabidopsis. PLoS One 2020;15:e0244030. [PMID: 33332435 PMCID: PMC7746274 DOI: 10.1371/journal.pone.0244030] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2020] [Accepted: 12/01/2020] [Indexed: 12/04/2022]  Open
20
Liu Y, Xue Y, Xie B, Zhu S, Lu X, Liang C, Tian J. Complex gene regulation between young and old soybean leaves in responses to manganese toxicity. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020;155:231-242. [PMID: 32781273 DOI: 10.1016/j.plaphy.2020.07.002] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Revised: 07/01/2020] [Accepted: 07/01/2020] [Indexed: 06/11/2023]
21
Szuba A, Marczak Ł, Kozłowski R. Role of the proteome in providing phenotypic stability in control and ectomycorrhizal poplar plants exposed to chronic mild Pb stress. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020;264:114585. [PMID: 32387672 DOI: 10.1016/j.envpol.2020.114585] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2019] [Revised: 03/09/2020] [Accepted: 04/09/2020] [Indexed: 06/11/2023]
22
Xie T, Liu Z, Wang G. Structural basis for monolignol oxidation by a maize laccase. NATURE PLANTS 2020;6:231-237. [PMID: 32123349 DOI: 10.1038/s41477-020-0595-5] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2019] [Accepted: 01/07/2020] [Indexed: 06/10/2023]
23
Gao J, Chen B, Lin H, Liu Y, Wei Y, Chen F, Li W. Identification and characterization of the glutathione S-Transferase (GST) family in radish reveals a likely role in anthocyanin biosynthesis and heavy metal stress tolerance. Gene 2020;743:144484. [PMID: 32081694 DOI: 10.1016/j.gene.2020.144484] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Revised: 02/14/2020] [Accepted: 02/15/2020] [Indexed: 11/26/2022]
24
Šiukšta R, Bondzinskaitė S, Kleizaitė V, Žvingila D, Taraškevičius R, Mockeliūnas L, Stapulionytė A, Mak K, Čėsnienė T. Response of Tradescantia plants to oxidative stress induced by heavy metal pollution of soils from industrial areas. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2019;26:44-61. [PMID: 30276686 DOI: 10.1007/s11356-018-3224-3] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Accepted: 09/13/2018] [Indexed: 06/08/2023]
25
Zhang G, Zhang T, Liu J, Zhang J, He C. Comprehensive analysis of differentially expressed genes reveals the molecular response to elevated CO 2 levels in two sea buckthorn cultivars. Gene 2018;660:120-127. [DOI: 10.1016/j.gene.2018.03.057] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2017] [Revised: 03/05/2018] [Accepted: 03/16/2018] [Indexed: 01/08/2023]
26
Transcriptome analysis in leaves of rice (Oryza sativa) under high manganese stress. Biologia (Bratisl) 2017. [DOI: 10.1515/biolog-2017-0048] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
27
Transcription Factors Responding to Pb Stress in Maize. Genes (Basel) 2017;8:genes8090231. [PMID: 28927013 PMCID: PMC5615364 DOI: 10.3390/genes8090231] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2017] [Revised: 09/07/2017] [Accepted: 09/15/2017] [Indexed: 12/23/2022]  Open
28
Transcriptomic and physiological analyses of Medicago sativa L. roots in response to lead stress. PLoS One 2017;12:e0175307. [PMID: 28388670 PMCID: PMC5384761 DOI: 10.1371/journal.pone.0175307] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2017] [Accepted: 03/23/2017] [Indexed: 12/16/2022]  Open
29
Li H, Hu T, Amombo E, Fu J. Transcriptome profilings of two tall fescue (Festuca arundinacea) cultivars in response to lead (Pb) stress. BMC Genomics 2017;18:145. [PMID: 28183269 PMCID: PMC5301350 DOI: 10.1186/s12864-016-3479-3] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2016] [Accepted: 12/29/2016] [Indexed: 11/10/2022]  Open
30
Song L, Prince S, Valliyodan B, Joshi T, Maldonado dos Santos JV, Wang J, Lin L, Wan J, Wang Y, Xu D, Nguyen HT. Genome-wide transcriptome analysis of soybean primary root under varying water-deficit conditions. BMC Genomics 2016;17:57. [PMID: 26769043 PMCID: PMC4714440 DOI: 10.1186/s12864-016-2378-y] [Citation(s) in RCA: 54] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2015] [Accepted: 01/06/2016] [Indexed: 11/10/2022]  Open
31
Tian S, Gu C, Liu L, Zhu X, Zhao Y, Huang S. Transcriptome Profiling of Louisiana iris Root and Identification of Genes Involved in Lead-Stress Response. Int J Mol Sci 2015;16:28087-97. [PMID: 26602925 PMCID: PMC4691031 DOI: 10.3390/ijms161226084] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2015] [Revised: 10/27/2015] [Accepted: 11/11/2015] [Indexed: 11/18/2022]  Open
32
Genome-wide identification and comparative analysis of grafting-responsive mRNA in watermelon grafted onto bottle gourd and squash rootstocks by high-throughput sequencing. Mol Genet Genomics 2015;291:621-33. [DOI: 10.1007/s00438-015-1132-5] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2015] [Accepted: 10/09/2015] [Indexed: 10/22/2022]
33
Wang J, Feng J, Jia W, Chang S, Li S, Li Y. Lignin engineering through laccase modification: a promising field for energy plant improvement. BIOTECHNOLOGY FOR BIOFUELS 2015;8:145. [PMID: 26379777 PMCID: PMC4570640 DOI: 10.1186/s13068-015-0331-y] [Citation(s) in RCA: 69] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2015] [Accepted: 09/01/2015] [Indexed: 05/05/2023]
34
Gong F, Yang L, Tai F, Hu X, Wang W. "Omics" of maize stress response for sustainable food production: opportunities and challenges. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY 2015;18:714-32. [PMID: 25401749 DOI: 10.1089/omi.2014.0125] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
35
Wang L, Yang H, Liu R, Fan G. Detoxification strategies and regulation of oxygen production and flowering of Platanus acerifolia under lead (Pb) stress by transcriptome analysis. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015;22:12747-12758. [PMID: 25913316 DOI: 10.1007/s11356-015-4563-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2015] [Accepted: 04/16/2015] [Indexed: 06/04/2023]
36
Xu L, Wang Y, Liu W, Wang J, Zhu X, Zhang K, Yu R, Wang R, Xie Y, Zhang W, Gong Y, Liu L. De novo sequencing of root transcriptome reveals complex cadmium-responsive regulatory networks in radish (Raphanus sativus L.). PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2015;236:313-23. [PMID: 26025544 DOI: 10.1016/j.plantsci.2015.04.015] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2014] [Revised: 04/04/2015] [Accepted: 04/20/2015] [Indexed: 05/04/2023]
37
Qin J, Wang X, Wang L, Zhu B, Zhang X, Yao Q, Xu P. Comparative transcriptome analysis reveals different molecular mechanisms of Bacillus coagulans 2-6 response to sodium lactate and calcium lactate during lactic acid production. PLoS One 2015;10:e0124316. [PMID: 25875592 PMCID: PMC4398400 DOI: 10.1371/journal.pone.0124316] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2014] [Accepted: 02/27/2015] [Indexed: 01/05/2023]  Open
38
Liu H, Yang X, Liao X, Zuo T, Qin C, Cao S, Dong L, Zhou H, Zhang Y, Liu S, Shen Y, Lin H, Lübberstedt T, Zhang Z, Pan G. Genome-wide comparative analysis of digital gene expression tag profiles during maize ear development. Genomics 2015;106:52-60. [PMID: 25847872 DOI: 10.1016/j.ygeno.2015.03.005] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2015] [Revised: 03/25/2015] [Accepted: 03/26/2015] [Indexed: 11/30/2022]
39
Liu X, Chu Z. Genome-wide evolutionary characterization and analysis of bZIP transcription factors and their expression profiles in response to multiple abiotic stresses in Brachypodium distachyon. BMC Genomics 2015. [PMID: 25887221 DOI: 10.1186/s12864-015-1457-1459] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2023]  Open
40
Genome-wide evolutionary characterization and analysis of bZIP transcription factors and their expression profiles in response to multiple abiotic stresses in Brachypodium distachyon. BMC Genomics 2015;16:227. [PMID: 25887221 PMCID: PMC4393604 DOI: 10.1186/s12864-015-1457-9] [Citation(s) in RCA: 71] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2014] [Accepted: 03/09/2015] [Indexed: 12/31/2022]  Open
41
Hou J, Liu X, Wang J, Zhao S, Cui B. Microarray-based analysis of gene expression in lycopersicon esculentum seedling roots in response to cadmium, chromium, mercury, and lead. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2015;49:1834-41. [PMID: 25565386 DOI: 10.1021/es504154y] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
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Gao J, Zhang Y, Lu C, Peng H, Luo M, Li G, Shen Y, Ding H, Zhang Z, Pan G, Lin H. The development dynamics of the maize root transcriptome responsive to heavy metal Pb pollution. Biochem Biophys Res Commun 2015;458:287-93. [PMID: 25645016 DOI: 10.1016/j.bbrc.2015.01.101] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2015] [Accepted: 01/21/2015] [Indexed: 11/25/2022]
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Ding H, Gao J, Qin C, Ma H, Huang H, Song P, Luo X, Lin H, Shen Y, Pan G, Zhang Z. The dynamics of DNA methylation in maize roots under Pb stress. Int J Mol Sci 2014;15:23537-54. [PMID: 25526567 PMCID: PMC4284779 DOI: 10.3390/ijms151223537] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2014] [Revised: 12/01/2014] [Accepted: 12/02/2014] [Indexed: 01/15/2023]  Open
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Ding H, Qin C, Luo X, Li L, Chen Z, Liu H, Gao J, Lin H, Shen Y, Zhao M, Lübberstedt T, Zhang Z, Pan G. Heterosis in early maize ear inflorescence development: a genome-wide transcription analysis for two maize inbred lines and their hybrid. Int J Mol Sci 2014;15:13892-915. [PMID: 25116687 PMCID: PMC4159830 DOI: 10.3390/ijms150813892] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2014] [Revised: 07/01/2014] [Accepted: 07/02/2014] [Indexed: 12/15/2022]  Open
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Shahid M, Pourrut B, Dumat C, Nadeem M, Aslam M, Pinelli E. Heavy-metal-induced reactive oxygen species: phytotoxicity and physicochemical changes in plants. REVIEWS OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2014;232:1-44. [PMID: 24984833 DOI: 10.1007/978-3-319-06746-9_1] [Citation(s) in RCA: 91] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
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Shen Y, Jiang Z, Lu S, Lin H, Gao S, Peng H, Yuan G, Liu L, Zhang Z, Zhao M, Rong T, Pan G. Combined small RNA and degradome sequencing reveals microRNA regulation during immature maize embryo dedifferentiation. Biochem Biophys Res Commun 2013;441:425-30. [PMID: 24183719 DOI: 10.1016/j.bbrc.2013.10.113] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2013] [Accepted: 10/16/2013] [Indexed: 11/18/2022]
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Shan J, Song W, Zhou J, Wang X, Xie C, Gao X, Xie T, Liu J. Transcriptome analysis reveals novel genes potentially involved in photoperiodic tuberization in potato. Genomics 2013;102:388-96. [PMID: 23856342 DOI: 10.1016/j.ygeno.2013.07.001] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2013] [Revised: 06/29/2013] [Accepted: 07/02/2013] [Indexed: 01/09/2023]
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Wang Y, Xu L, Chen Y, Shen H, Gong Y, Limera C, Liu L. Transcriptome profiling of radish (Raphanus sativus L.) root and identification of genes involved in response to Lead (Pb) stress with next generation sequencing. PLoS One 2013;8:e66539. [PMID: 23840502 PMCID: PMC3688795 DOI: 10.1371/journal.pone.0066539] [Citation(s) in RCA: 64] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2013] [Accepted: 05/07/2013] [Indexed: 11/19/2022]  Open
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Fuoco R, Bogani P, Capodaglio G, Del Bubba M, Abollino O, Giannarelli S, Spiriti MM, Muscatello B, Doumett S, Turetta C, Zangrando R, Zelano V, Buiatti M. Response to metal stress of Nicotiana langsdorffii plants wild-type and transgenic for the rat glucocorticoid receptor gene. JOURNAL OF PLANT PHYSIOLOGY 2013;170:668-75. [PMID: 23395537 DOI: 10.1016/j.jplph.2012.12.009] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2012] [Revised: 12/15/2012] [Accepted: 12/17/2012] [Indexed: 06/01/2023]
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