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Bi M, Li H, Meidl P, Zhu Y, Ryo M, Rillig MC. Number and dissimilarity of global change factors influences soil properties and functions. Nat Commun 2024; 15:8188. [PMID: 39294171 PMCID: PMC11410830 DOI: 10.1038/s41467-024-52511-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2024] [Accepted: 09/11/2024] [Indexed: 09/20/2024] Open
Abstract
Soil biota and functions are impacted by various anthropogenic stressors, including climate change, chemical pollution or microplastics. These stressors do not occur in isolation, and soil properties and functions appear to be directionally driven by the number of global change factors acting simultaneously. Building on this insight, we here hypothesize that co-acting factors with more diverse effect mechanisms, or higher dissimilarity, have greater impacts on soil properties and functions. We created a factor pool of 12 factors and calculated dissimilarity indices of randomly-chosen co-acting factors based on the measured responses of soil properties and functions to the single factors. Results show that not only was the number of factors important, but factor dissimilarity was also key for predicting factor joint effects. By analyzing deviations of soil properties and functions from three null model predictions, we demonstrate that higher factor dissimilarity and a larger number of factors could drive larger deviations from null models and trigger more frequent occurrence of synergistic factor net interactions on soil functions (decomposition rate, cellulase, and β-glucosidase activity), which provides mechanistic insights for understanding high-dimensional effects of factors. Our work highlights the importance of considering factor similarity in future research on interacting factors.
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Affiliation(s)
- Mohan Bi
- Freie Universität Berlin, Institute of Biology, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
| | - Huiying Li
- Freie Universität Berlin, Institute of Biology, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
| | - Peter Meidl
- Freie Universität Berlin, Institute of Biology, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
| | - Yanjie Zhu
- Freie Universität Berlin, Institute of Biology, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
| | - Masahiro Ryo
- Leibniz Centre for Agricultural Landscape Research (ZALF), Müncheberg, Germany
- Brandenburg University of Technology Cottbus-Senftenberg, Platz der Deutschen Einheit 1, Cottbus, Germany
| | - Matthias C Rillig
- Freie Universität Berlin, Institute of Biology, Berlin, Germany.
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany.
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2
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Schou MF, Cornwallis CK. Adaptation to fluctuating temperatures across life stages in endotherms. Trends Ecol Evol 2024; 39:841-850. [PMID: 38902165 DOI: 10.1016/j.tree.2024.05.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 05/16/2024] [Accepted: 05/24/2024] [Indexed: 06/22/2024]
Abstract
Accelerating rates of climate change have intensified research on thermal adaptation. Increasing temperature fluctuations, a prominent feature of climate change, means that the persistence of many species depends on both heat and cold tolerance across the entire life cycle. In endotherms, research has focused on specific life stages, with changes in thermoregulation across life rarely being examined. Consequently, there is a need to (i) analyse how heat and cold tolerance mechanisms coevolve, and (ii) test whether antagonistic effects between heat and cold tolerance across different life stages limit thermal adaptation. Information on genes influencing heat and cold tolerance and how they are expressed through life will enable more accurate modelling of species vulnerabilities to future climatic volatility.
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Affiliation(s)
- Mads F Schou
- Department of Biology, Aarhus University, 8000 Aarhus, Denmark.
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3
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Santos MA, Carromeu-Santos A, Quina AS, Antunes MA, Kristensen TN, Santos M, Matos M, Fragata I, Simões P. Experimental Evolution in a Warming World: The Omics Era. Mol Biol Evol 2024; 41:msae148. [PMID: 39034684 PMCID: PMC11331425 DOI: 10.1093/molbev/msae148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Revised: 06/25/2024] [Accepted: 07/12/2024] [Indexed: 07/23/2024] Open
Abstract
A comprehensive understanding of the genetic mechanisms that shape species responses to thermal variation is essential for more accurate predictions of the impacts of climate change on biodiversity. Experimental evolution with high-throughput resequencing approaches (evolve and resequence) is a highly effective tool that has been increasingly employed to elucidate the genetic basis of adaptation. The number of thermal evolve and resequence studies is rising, yet there is a dearth of efforts to integrate this new wealth of knowledge. Here, we review this literature showing how these studies have contributed to increase our understanding on the genetic basis of thermal adaptation. We identify two major trends: highly polygenic basis of thermal adaptation and general lack of consistency in candidate targets of selection between studies. These findings indicate that the adaptive responses to specific environments are rather independent. A review of the literature reveals several gaps in the existing research. Firstly, there is a paucity of studies done with organisms of diverse taxa. Secondly, there is a need to apply more dynamic and ecologically relevant thermal environments. Thirdly, there is a lack of studies that integrate genomic changes with changes in life history and behavioral traits. Addressing these issues would allow a more in-depth understanding of the relationship between genotype and phenotype. We highlight key methodological aspects that can address some of the limitations and omissions identified. These include the need for greater standardization of methodologies and the utilization of new technologies focusing on the integration of genomic and phenotypic variation in the context of thermal adaptation.
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Affiliation(s)
- Marta A Santos
- CE3C—Centre for Ecology, Evolution and Environmental Changes & CHANGE, Global Change and Sustainability Institute, Lisboa, Portugal
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
| | - Ana Carromeu-Santos
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
| | - Ana S Quina
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
- Egas Moniz Center for Interdisciplinary Research (CiiEM), Egas Moniz School of Health & Science, Almada, Portugal
| | - Marta A Antunes
- CE3C—Centre for Ecology, Evolution and Environmental Changes & CHANGE, Global Change and Sustainability Institute, Lisboa, Portugal
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
| | | | - Mauro Santos
- CE3C—Centre for Ecology, Evolution and Environmental Changes & CHANGE, Global Change and Sustainability Institute, Lisboa, Portugal
- Departament de Genètica i de Microbiologia, Grup de Genòmica, Bioinformàtica i Biologia Evolutiva (GBBE), Universitat Autonòma de Barcelona, Bellaterra, Spain
| | - Margarida Matos
- CE3C—Centre for Ecology, Evolution and Environmental Changes & CHANGE, Global Change and Sustainability Institute, Lisboa, Portugal
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
| | - Inês Fragata
- CE3C—Centre for Ecology, Evolution and Environmental Changes & CHANGE, Global Change and Sustainability Institute, Lisboa, Portugal
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
| | - Pedro Simões
- CE3C—Centre for Ecology, Evolution and Environmental Changes & CHANGE, Global Change and Sustainability Institute, Lisboa, Portugal
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
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Kristensen TN, Schönherz AA, Rohde PD, Sørensen JG, Loeschcke V. Selection for stress tolerance and longevity in Drosophila melanogaster have strong impacts on microbiome profiles. Sci Rep 2024; 14:17789. [PMID: 39090347 PMCID: PMC11294339 DOI: 10.1038/s41598-024-68753-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Accepted: 07/26/2024] [Indexed: 08/04/2024] Open
Abstract
There is experimental evidence that microbiomes have a strong influence on a range of host traits. Understanding the basis and importance of symbiosis between host and associated microorganisms is a rapidly developing research field, and we still lack a mechanistic understanding of ecological and genetic pressures affecting host-microbiome associations. Here Drosophila melanogaster lines from a large-scale artificial selection experiment were used to investigate whether the microbiota differ in lines selected for different stress resistance traits and longevity. Following multiple generations of artificial selection all selection regimes and corresponding controls had their microbiomes assessed. The microbiome was interrogated based on 16S rRNA sequencing. We found that the microbiome of flies from the different selection regimes differed markedly from that of the unselected control regime, and microbial diversity was consistently higher in selected relative to control regimes. Several common Drosophila bacterial species showed differentially abundance in the different selection regimes despite flies being exposed to similar environmental conditions for two generations prior to assessment. Our findings provide strong evidence for symbiosis between host and microbiomes but we cannot reveal whether the interactions are adaptive, nor whether they are caused by genetic or ecological factors.
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Affiliation(s)
- Torsten Nygaard Kristensen
- Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, 9220, Aalborg, Denmark.
| | - Anna A Schönherz
- Department of Animal and Veterinary Sciences, Aarhus University, Tjele, Denmark
| | - Palle Duun Rohde
- Department of Health Science and Technology, Aalborg University, Aalborg, Denmark
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Krittika S, Yadav P. Correlated changes in stress resistance and biochemical parameters in response to long-term protein restriction in Drosophila melanogaster. ROYAL SOCIETY OPEN SCIENCE 2024; 11:231741. [PMID: 39100164 PMCID: PMC11295984 DOI: 10.1098/rsos.231741] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Accepted: 05/02/2024] [Indexed: 08/06/2024]
Abstract
Studies in fruit flies, Drosophila melanogaster, have observed considerable variation in the effect of dietary protein restriction (PR) on various fitness traits. In addition, not only are there inconsistent results relating lifespan to stress resistance, but also the long-term effects of PR are unexplored. We study PR implementation across generations (long term) hypothesizing that it will be beneficial for fitness traits, stress resistance and storage reserves due to nutritional plasticity transferred by parents to offspring in earlier Drosophila studies. By imposing two concentrations of PR diets (50% and 70% of control protein) from the pre-adult and adult (age 1 day) stages of the flies, we assessed the stage-specific and long-term effect of the imposed PR. All long-term PR flies showed increased resistance against the tested stressors (starvation, desiccation, H2O2-induced oxidative stress). In addition, we also found long-term PR-induced increased stress resistance across generations. The PR flies also possessed higher protein and triglyceride (TG) content, reduced glucose and unaffected glycogen levels. We also assayed the effect of returning the PR flies to control (AL) food for a single generation and assessed their biochemical parameters to witness the transient PR effect. It was seen that TG content upon reversal was similar to AL flies except for PRI70 males; however, the glucose levels of PR males increased, while they were consistently lower in females. Taken altogether, our study suggests that long-term PR implementation contributes to increased stress resistance and was found to influence storage reserves in D. melanogaster.
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Affiliation(s)
- Sudhakar Krittika
- Fly Laboratory # 210, Anusandhan Kendra-II, School of Chemical & Biotechnology, SASTRA Deemed to be University, Thanjavur, Tamil Nadu 613401, India
| | - Pankaj Yadav
- Fly Laboratory # 210, Anusandhan Kendra-II, School of Chemical & Biotechnology, SASTRA Deemed to be University, Thanjavur, Tamil Nadu 613401, India
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Mikhailova DV, Shevchenko OG, Golubev DA, Platonova EY, Zemskaya NV, Shoeva OY, Gordeeva EI, Patov SA, Shaposhnikov MV, Khlestkina EK, Moskalev A. Antioxidant Properties and Geroprotective Potential of Wheat Bran Extracts with Increased Content of Anthocyanins. Antioxidants (Basel) 2023; 12:2010. [PMID: 38001863 PMCID: PMC10669849 DOI: 10.3390/antiox12112010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2023] [Revised: 11/12/2023] [Accepted: 11/15/2023] [Indexed: 11/26/2023] Open
Abstract
In recent years, there has been a focus on breeding wheat with high anthocyanin levels in order to improve food quality and human health. The objective of this study was to examine the antioxidant and geroprotective properties of wheat bran extracts using both in vitro and in vivo research methods. Two wheat lines were used: one with uncolored pericarp (anthocyanin-free) and another with colored pericarp (anthocyanin-containing). These lines differed in a specific region of chromosome 2A containing the Pp3/TaMyc1 gene, which regulates anthocyanin production. High-performance liquid chromatography-mass spectrometry revealed the presence of cyanidin glucoside and cyanidin arabinoside in the anthocyanin-containing wheat bran extract (+AWBE), while no anthocyanins were found in the anthocyanin-free wheat bran extract (-AWBE). The +AWBE showed higher radical scavenging activity (DPPH and ABTS assays) and membrane protective activity (AAPH oxidative hemolysis model) compared to the -AWBE. Both extracts extended the lifespan of female Drosophila, indicating geroprotective properties. This study demonstrates that wheat bran extracts with high anthocyanin levels have antioxidant and geroprotective effects. However, other secondary metabolites in wheat bran can also contribute to its antioxidant and geroprotective potential.
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Affiliation(s)
- Daria V. Mikhailova
- Institute of Biology of Komi Scientific Centre of the Ural Branch of the RAS, 167982 Syktyvkar, Russia
| | - Oksana G. Shevchenko
- Institute of Biology of Komi Scientific Centre of the Ural Branch of the RAS, 167982 Syktyvkar, Russia
| | - Denis A. Golubev
- Institute of Biology of Komi Scientific Centre of the Ural Branch of the RAS, 167982 Syktyvkar, Russia
| | - Elena Y. Platonova
- Institute of Biology of Komi Scientific Centre of the Ural Branch of the RAS, 167982 Syktyvkar, Russia
| | - Nadezhda V. Zemskaya
- Institute of Biology of Komi Scientific Centre of the Ural Branch of the RAS, 167982 Syktyvkar, Russia
- Federal Research Center N. I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR), 190031 St. Petersburg, Russia
| | - Olesya Yu. Shoeva
- Institute of Cytology and Genetics of the Siberian Branch of Russian Academy of Sciences (ICG SB RAS), 630090 Novosibirsk, Russia
| | - Elena I. Gordeeva
- Institute of Cytology and Genetics of the Siberian Branch of Russian Academy of Sciences (ICG SB RAS), 630090 Novosibirsk, Russia
| | - Sergey A. Patov
- Institute of Chemistry of Komi Scientific Centre of the Ural Branch of the RAS, 167000 Syktyvkar, Russia
| | - Mikhail V. Shaposhnikov
- Institute of Biology of Komi Scientific Centre of the Ural Branch of the RAS, 167982 Syktyvkar, Russia
- Federal Research Center N. I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR), 190031 St. Petersburg, Russia
| | - Elena K. Khlestkina
- Federal Research Center N. I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR), 190031 St. Petersburg, Russia
| | - Alexey Moskalev
- Institute of Biology of Komi Scientific Centre of the Ural Branch of the RAS, 167982 Syktyvkar, Russia
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7
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Wang X, Liu L, Guo S, Liu B, Zhai Y, Yan S, Shen J, Ullah F, Li Z. Tweedle gene family of Drosophila suzukii (Matsumura) larva enhances the basal tolerance to cold and hypoxia. PEST MANAGEMENT SCIENCE 2023; 79:3012-3021. [PMID: 36966456 DOI: 10.1002/ps.7476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 03/22/2023] [Accepted: 03/26/2023] [Indexed: 06/18/2023]
Abstract
BACKGROUND Drosophila suzukii (Matsumura) is considered a quarantine pest in the A2 list because it causes serious infection and huge economic losses. Cold and controlled atmosphere treatments have been used to control immature stage pests in fresh fruits. Herein, the basal tolerance response of D. suzukii egg, larva and pupa to cold and hypoxia stress were studied, and underlying transcriptome mechanisms in the larva were pinpointed. RESULTS The third instar was more tolerant than 12-h-old egg and 8-day-old pupa when treated at 3 °C + 1% O2 for 7 days, with 34.00% ± 5.22% larval survival. Hypoxia influenced the effect of cold treatment on D. suzukii. Larval survival decreased at 3 °C + 1% O2 , but increased at 0 °C + 1% O2 . Survival increased with temperature between 0 and 5 °C + 1% O2 , but decreased significantly at 25 °C + 1% O2 . RNA-sequencing results showed that the Tweedle (Twdl) family was upregulated and uniquely enriched in larvae treated at 3 °C + 1% O2 . In addition, RNA interference-mediated silencing of a key Twdl gene reduced the survival rate after cold and hypoxia treatment. CONCLUSION Hypoxia was able to influence the effect of cold treatment on the survival of D. suzukii positively or negatively. Structural constituents of the chitin-based cuticle, in particular Twdl genes, body morphogenesis, and ATP synthesis-coupled proton transport were involved in the tolerance to cold and hypoxia. In future, the Twdl gene could be used as a nanocarrier delivering RNA pesticides to control D. suzukii in the field and so prevent its worldwide spread. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Xiaoxue Wang
- Department of Plant Biosecurity, College of Plant Protection, China Agricultural University, Beijing, P. R. China
- Key Laboratory of Surveillance and Management for Plant Quarantine Pests, Ministry of Agriculture and Rural Affairs, Beijing, P. R. China
| | - Lijun Liu
- Department of Plant Biosecurity, College of Plant Protection, China Agricultural University, Beijing, P. R. China
- Key Laboratory of Surveillance and Management for Plant Quarantine Pests, Ministry of Agriculture and Rural Affairs, Beijing, P. R. China
| | - Shaokun Guo
- Department of Plant Biosecurity, College of Plant Protection, China Agricultural University, Beijing, P. R. China
- Key Laboratory of Surveillance and Management for Plant Quarantine Pests, Ministry of Agriculture and Rural Affairs, Beijing, P. R. China
| | - Bo Liu
- Institute of Equipment Technology, Chinese Academy of Inspection and Quarantine, Beijing, P. R. China
| | - Yifan Zhai
- Institute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, P. R. China
| | - Shuo Yan
- Department of Plant Biosecurity, College of Plant Protection, China Agricultural University, Beijing, P. R. China
- Key Laboratory of Surveillance and Management for Plant Quarantine Pests, Ministry of Agriculture and Rural Affairs, Beijing, P. R. China
| | - Jie Shen
- Department of Plant Biosecurity, College of Plant Protection, China Agricultural University, Beijing, P. R. China
- Key Laboratory of Surveillance and Management for Plant Quarantine Pests, Ministry of Agriculture and Rural Affairs, Beijing, P. R. China
| | - Farman Ullah
- Department of Plant Biosecurity, College of Plant Protection, China Agricultural University, Beijing, P. R. China
- Key Laboratory of Surveillance and Management for Plant Quarantine Pests, Ministry of Agriculture and Rural Affairs, Beijing, P. R. China
| | - Zhihong Li
- Department of Plant Biosecurity, College of Plant Protection, China Agricultural University, Beijing, P. R. China
- Key Laboratory of Surveillance and Management for Plant Quarantine Pests, Ministry of Agriculture and Rural Affairs, Beijing, P. R. China
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8
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Aggarwal DD, Mishra P, Singh M. An analysis of direct and indirect effects in Drosophila melanogaster undergoing a few cycles of experimental evolution for stress-related traits. Comp Biochem Physiol B Biochem Mol Biol 2023; 263:110795. [PMID: 35970341 DOI: 10.1016/j.cbpb.2022.110795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Revised: 08/04/2022] [Accepted: 08/08/2022] [Indexed: 10/15/2022]
Abstract
The physiological mechanisms underpinning adaptations to starvation and cold stresses have been extensively studied in Drosophila, yet the understanding of correlated changes in stress-related and life-history traits, as well as the energetics of stress tolerance, still remains elusive. To answer the questions empirically in this context, we allowed D. melanogaster to evolve for either increased starvation or cold tolerance (24-generations / regime) in an experimental evolution system, and examined whether selection of either trait affects un-selected stress trait, as well as the impacts potential changes in life-history and mating success-related traits. Our results revealed remarkable changes in starvation/cold tolerance (up to 1.5-fold) as a direct effect of selection, while cold tolerance had been dramatically reduced (1.26-fold) in the starvation tolerant (ST) lines compared to control counterparts, although no such changes were evident in cold-tolerant (CT) lines. ST lines exhibited a higher level of body lipids and a reduced level of trehalose content, while CT lines accumulated a greater levels of body lipid and trehalose contents. Noticeably, we found that selection for starvation or cold tolerance positively correlates with larval development time, longevity, and copulation duration, indicating that these traits are among the most common targets of selection trajectories shaping stress tolerance. Altogether, this study highlights the complexity of mechanisms evolved in ST lines that contribute to enhanced starvation tolerance, but also negatively impact cold tolerance. Nevertheless, mechanisms foraging enhanced cold tolerance in CT lines appear not to target starvation tolerance. Moreover, the parallel changes in life history/mating success traits across stress regimes could indicate some generic pathways evolved in stressful environments, targeting life-history and mating success characteristics to optimize fitness.
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Affiliation(s)
- Dau Dayal Aggarwal
- Department of Biochemistry, University of Delhi South Campus, New Delhi 110021, India.
| | - Prachi Mishra
- Department of Biochemistry, University of Delhi South Campus, New Delhi 110021, India
| | - Manvender Singh
- Department of Biotechnology, University Institute of Technology, Maharshi Dayanand University, Rohtak 124001, India
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Tarusikirwa VL, Cuthbert RN, Mutamiswa R, Nyamukondiwa C. Context-dependent integrated stress resistance promotes a global invasive pest. INSECT SCIENCE 2022; 29:1790-1804. [PMID: 35290720 PMCID: PMC10084016 DOI: 10.1111/1744-7917.13035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Revised: 02/25/2022] [Accepted: 03/07/2022] [Indexed: 06/14/2023]
Abstract
In nature, insects concurrently face multiple environmental stressors, a scenario likely increasing with climate change. Integrated stress resistance (ISR) thus often improves fitness and could drive invasiveness, but how physiological mechanisms influence invasion has lacked examination. Here, we investigated cross-tolerance to abiotic stress factors which may influence range limits in the South American tomato pinworm-a global invader that is an ecologically and socially damaging crop pest. Specifically, we tested the effects of prior rapid cold- and heat-hardening (RCH and RHH), fasting, and desiccation on cold and heat tolerance traits, as well as starvation and desiccation survivability between T. absoluta life stages. Acclimation effects on critical thermal minima (CTmin ) and maxima (CTmax ) were inconsistent, showing significantly deleterious effects of RCH on adult CTmax and CTmin and, conversely, beneficial acclimation effects of RCH on larval CTmin . While no beneficial effects of desiccation acclimation were recorded for desiccation tolerance, fasted individuals had significantly higher survival in adults, whereas fasting negatively affected larval tolerances. Furthermore, fasted and desiccation acclimated adults had significantly higher starvation tolerance, showing strong evidence for cross-tolerance. Our results show context-dependent ISR traits that may promote T. absoluta fitness and competitiveness. Given the frequent overlapping occurrence of these divergent stressors, ISR reported here may thus partly elucidate the observed rapid global spread of T. absoluta into more stressful environments than expected. This information is vital in determining the underpinnings of multistressor responses, which are fundamental in forecasting species responses to changing environments and management responses.
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Affiliation(s)
- Vimbai L. Tarusikirwa
- Department of Biological Sciences and BiotechnologyBotswana International University of Science and TechnologyPalapyeBotswana
| | - Ross N. Cuthbert
- GEOMAR Helmholtz‐Zentrum für Ozeanforschung KielKielGermany
- School of Biological SciencesQueen's University BelfastNorthern IrelandUnited Kingdom
| | - Reyard Mutamiswa
- Department of Zoology and EntomologyUniversity of the Free StateBloemfonteinSouth Africa
- Tugwi‐Mukosi Multidisciplinary Research InstituteMidlands State UniversityGweruZimbabwe
| | - Casper Nyamukondiwa
- Department of Biological Sciences and BiotechnologyBotswana International University of Science and TechnologyPalapyeBotswana
- Department of Zoology and EntomologyRhodes UniversityMakhandaSouth Africa
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10
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Evolved tolerance to NaCl does not alter Daphnia response to acute heat stress. Evol Ecol 2022. [DOI: 10.1007/s10682-022-10220-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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11
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Singh K, Arun Samant M, Prasad NG. Evolution of cross-tolerance in Drosophila melanogaster as a result of increased resistance to cold stress. Sci Rep 2022; 12:19536. [PMID: 36376445 PMCID: PMC9663562 DOI: 10.1038/s41598-022-23674-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2022] [Accepted: 11/03/2022] [Indexed: 11/16/2022] Open
Abstract
Cold stress is a critical environmental challenge that affects an organism's fitness-related traits. In Drosophila, increased resistance to specific environmental stress may lead to increased resistance to other kinds of stress. In the present study, we aimed to understand whether increased cold stress resistance in Drosophila melanogaster can facilitate their ability to tolerate other environmental stresses. For the current study, we used successfully selected replicate populations of D. melanogaster against cold shock and their control population. These selected populations have evolved several reproductive traits, including increased egg viability, mating frequency, male mating ability, ability to sire progenies, and faster recovery for mating latency under cold shock conditions. In the present work, we investigated egg viability and mating frequency with and without heat and cold shock conditions in the selected and their control populations. We also examined resistance to cold shock, heat shock, desiccation, starvation, and survival post-challenge with Staphylococcus succinus subsp. succinus PK-1 in the selected and their control populations. After cold-shock treatment, we found a 1.25 times increase in egg viability and a 1.57 times increase in mating frequency in the selected populations compared to control populations. Moreover, more males (0.87 times) and females (1.66 times) of the selected populations survived under cold shock conditions relative to their controls. After being subjected to heat shock, the selected population's egg viability and mating frequency increased by 0.30 times and 0.57 times, respectively, compared to control populations. Additionally, more selected males (0.31 times) and females (0.98 times) survived under heat shock conditions compared to the control populations. Desiccation resistance slightly increased in the females of the selected populations relative to their control, but we observed no change in the case of males. Starvation resistance decreased in males and females of the selected populations compared to their controls. Our findings suggest that the increased resistance to cold shock correlates with increased tolerance to heat stress, but this evolved resistance comes at a cost, with decreased tolerance to starvation.
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Affiliation(s)
- Karan Singh
- grid.458435.b0000 0004 0406 1521Department of Biological Sciences, Indian Institute of Science Education and Research Mohali, Knowledge City, Sector 81, SAS Nagar, PO Manauli, Ajitgarh, Punjab 140306 India ,grid.137628.90000 0004 1936 8753Present Address: Department of Cell Biology, NYU Grossman School of Medicine, 595 Medical Science Building, 550 First Ave, New York, NY 10016 USA
| | - Manas Arun Samant
- grid.458435.b0000 0004 0406 1521Department of Biological Sciences, Indian Institute of Science Education and Research Mohali, Knowledge City, Sector 81, SAS Nagar, PO Manauli, Ajitgarh, Punjab 140306 India
| | - Nagaraj Guru Prasad
- grid.458435.b0000 0004 0406 1521Department of Biological Sciences, Indian Institute of Science Education and Research Mohali, Knowledge City, Sector 81, SAS Nagar, PO Manauli, Ajitgarh, Punjab 140306 India
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12
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Holmstrup M, Sørensen JG, Dai W, Krogh PH, Schmelz RM, Slotsbo S. Analysis of heat and cold tolerance of a freeze-tolerant soil invertebrate distributed from temperate to Arctic regions: evidence of selection for extreme cold tolerance. J Comp Physiol B 2022; 192:435-445. [PMID: 35312816 DOI: 10.1007/s00360-022-01433-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Revised: 03/01/2022] [Accepted: 03/07/2022] [Indexed: 10/18/2022]
Abstract
Tolerance to thermal extremes is critical for the geographic distributions of ectotherm species, many of which are probably going to be modified by future climatic changes. To predict species distributions it is important to understand the potential of species to adapt to changing thermal conditions. Here, we tested whether the thermal tolerance traits of a common freeze-tolerant potworm were correlated with climatic conditions and if adaptation to extreme cold constrains the evolutionary potential for high temperature tolerance. Further, we tested if evolution of thermal tolerance traits is associated with costs in other fitness traits (body size and reproduction). Lastly, we tested if slopes of temperature-survival curves (i.e., the sensitivity distribution) are related to tolerance itself. Using 24 populations of the potworm, Enchytraeus albidus Henle (Enchytraeidae), collected from a wide range of climatic conditions, we established a common garden experiment in which we determined high and low temperature tolerance (using survival as endpoint), average reproductive output and adult body size. Heat tolerance was not related to environmental temperatures whereas lower lethal temperature was about 10 °C lower in Arctic populations than in populations from temperate regions. Reproduction was not related to environmental temperature, but was negatively correlated with cold tolerance. One explanation for the trade-off between cold tolerance and reproduction could be that the more cold-hardy populations need to channel energy to large glycogen reserves at the expense of less energy expenditure for reproduction. Adult body size was negatively related to environmental temperature. Finally, the slopes of temperature-survival curves were significantly correlated with critical temperature limits for heat and cold tolerance; i.e., slopes increased with thermal tolerance. Our results suggest that relatively heat-sensitive populations possess genetic variation, leaving room for improved heat tolerance through evolutionary processes, which may alleviate the effects of a warmer future climate in the Arctic. On the other hand, we observed relatively narrow sensitivity distributions (i.e., less variation) in the most heat tolerant populations. Taken together, our results suggest that both cold and heat tolerance can only be selected for (and improved) until a certain limit has been reached.
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Affiliation(s)
- Martin Holmstrup
- Department of Ecoscience, Section of Terrestrial Ecology, Aarhus University, Vejlsøvej 25, 8600, Silkeborg, Denmark.
| | - Jesper G Sørensen
- Department of Biology, Section of Genetics, Ecology and Evolution, Aarhus University, Ny Munkegade 116, Building 1540, 8000, Aarhus C, Denmark
| | - Wencai Dai
- Department of Ecoscience, Section of Terrestrial Ecology, Aarhus University, Vejlsøvej 25, 8600, Silkeborg, Denmark
| | - Paul Henning Krogh
- Department of Ecoscience, Section of Terrestrial Ecology, Aarhus University, Vejlsøvej 25, 8600, Silkeborg, Denmark
| | - Rüdiger M Schmelz
- IFAB, Institute for Applied Soil Biology, Tomberg 24a, 22337, Hamburg, Germany
| | - Stine Slotsbo
- Department of Ecoscience, Section of Terrestrial Ecology, Aarhus University, Vejlsøvej 25, 8600, Silkeborg, Denmark
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13
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McHugh KM, Burke MK. From microbes to mammals: The experimental evolution of aging and longevity across species. Evolution 2022; 76:692-707. [PMID: 35112358 DOI: 10.1111/evo.14442] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 11/09/2021] [Accepted: 12/01/2021] [Indexed: 01/21/2023]
Abstract
Senescence, the functional deterioration of cells or organisms associated with increased age, is pervasive across the tree of life. Yet our understanding of the genetic and physiological basis underlying age-related declines in health and reproduction remains limited. Experimental evolution allows empirical examination of the question of why aging occurs; imposing selection for age-specific fitness traits shifts patterns of aging in experimental populations, enabling investigations of the variation underlying senescence and the mechanisms governing it. Whole-genome sequencing of experimentally evolved populations may reveal candidate genomic variants underlying particular aging patterns; unfortunately, most study systems suffer from limitations that weaken associations between genotypes and phenotypes. In this review, we provide a survey of experimental evolution studies that have altered population-level patterns of reproductive timing and senescence in a variety of species. We discuss the specific selection conditions that have increased longevity, the phenotypic responses and trade-offs that accompany these increases, and examine genomic data collected from these experiments. Additionally, we consider how selected field studies complement laboratory experiments on life-history evolution. Finally, we address the strengths and weaknesses of existing study systems, and evaluate which model organisms appear most promising for future genomic investigations of the evolutionary biology of aging.
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Affiliation(s)
- Kaitlin M McHugh
- Department of Integrative Biology, Oregon State University, Corvallis, Oregon, 97331
| | - Molly K Burke
- Department of Integrative Biology, Oregon State University, Corvallis, Oregon, 97331
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14
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Sandfeld T, Malmos KG, Nielsen CB, Lund MB, Aagaard A, Bechsgaard J, Wurster M, Lalk M, Johannsen M, Vosegaard T, Bilde T, Schramm A. Metabolite Profiling of the Social Spider Stegodyphus dumicola Along a Climate Gradient. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.841490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Animals experience climatic variation in their natural habitats, which may lead to variation in phenotypic responses among populations through local adaptation or phenotypic plasticity. In ectotherm arthropods, the expression of thermoprotective metabolites such as free amino acids, sugars, and polyols, in response to temperature stress, may facilitate temperature tolerance by regulating cellular homeostasis. If populations experience differences in temperatures, individuals may exhibit population-specific metabolite profiles through differential accumulation of metabolites that facilitate thermal tolerance. Such thermoprotective metabolites may originate from the animals themselves or from their associated microbiome, and hence microbial symbionts may contribute to shape the thermal niche of their host. The social spider Stegodyphus dumicola has extremely low genetic diversity, yet it occupies a relatively broad temperature range occurring across multiple climate zones in Southern Africa. We investigated whether the metabolome, including thermoprotective metabolites, differs between populations, and whether population genetic structure or the spider microbiome may explain potential differences. To address these questions, we assessed metabolite profiles, phylogenetic relationships, and microbiomes in three natural populations along a temperature gradient. The spider microbiomes in three genetically distinct populations of S. dumicola showed no significant population-specific pattern, and none of its dominating genera (Borrelia, Diplorickettsia, and Mycoplasma) are known to facilitate thermal tolerance in hosts. These results do not support a role of the microbiome in shaping the thermal niche of S. dumicola. Metabolite profiles of the three spider populations were significantly different. The variation was driven by multiple metabolites that can be linked to temperature stress (e.g., lactate, succinate, or xanthine) and thermal tolerance (e.g., polyols, trehalose, or glycerol): these metabolites had higher relative abundance in spiders from the hottest geographic region. These distinct metabolite profiles are consistent with a potential role of the metabolome in temperature response.
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15
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Singh K, Kochar E, Gahlot P, Bhatt K, Prasad NG. Evolution of reproductive traits have no apparent life-history associated cost in populations of Drosophila melanogaster selected for cold shock resistance. BMC Ecol Evol 2021; 21:219. [PMID: 34872492 PMCID: PMC8650462 DOI: 10.1186/s12862-021-01934-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2021] [Accepted: 11/04/2021] [Indexed: 11/22/2022] Open
Abstract
Background In insect species like Drosophila melanogaster, evolution of increased resistance or evolution of particular traits under specific environmental conditions can lead to energy trade-offs with other crucial life-history traits. Adaptation to cold stress can, in principle, involve modification of reproductive traits and physiological responses. Reproductive traits carry a substantial cost; and therefore, the evolution of reproductive traits in response to cold stress could potentially lead to trade-offs with other life-history traits. We have successfully selected replicate populations of Drosophila melanogaster for increased resistance to cold shock for over 33 generations. In these populations, the ability to recover from cold shock, mate, and lay fertile eggs 24 h post cold shock is under selection. These populations have evolved a suite of reproductive traits including increased egg viability, male mating ability, and siring ability post cold shock. These populations also show elevated mating rate both with and without cold shock. In the present study, we quantified a suite of life-history related traits in these populations to assess if evolution of cold shock resistance in these populations comes at a cost of other life-history traits. Results To assess life-history cost, we measured egg viability, mating frequency, longevity, lifetime fecundity, adult mortality, larva to adult development time, larvae to adults survival, and body weight in the cold shock selected populations and their controls under two treatments (a) post cold chock and (b) without cold shock. Twenty-four hours post cold shock, the selected population had significantly higher egg viability and mating frequency compared to control populations indicating that they have higher cold shock resistance. Selected populations had significantly longer pre-adult development time compared to their control populations. Females from the selected populations had higher body weight compared to their control populations. However, we did not find any significant difference between the selected and control populations in longevity, lifetime fecundity, adult mortality, larvae to adults survival, and male body weight under the cold chock or no cold shock treatments. Conclusions These findings suggest that cold shock selected populations have evolved higher mating frequency and egg viability. However, there is no apparent life-history associated cost with the evolution of egg viability and reproductive performances under the cold stress condition. Supplementary Information The online version contains supplementary material available at 10.1186/s12862-021-01934-2.
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Affiliation(s)
- Karan Singh
- Department of Cell Biology, NYU Grossman School of Medicine, 650 Medical Science Building, 550 First Ave, New York, NY, 10016, USA. .,Indian Institute of Science Education and Research Mohali, Knowledge City, Sector 81, SAS Nagar, PO Manauli, Mohali, Punjab, 140306, India.
| | - Ekta Kochar
- Indian Institute of Science Education and Research Mohali, Knowledge City, Sector 81, SAS Nagar, PO Manauli, Mohali, Punjab, 140306, India
| | - Prakhar Gahlot
- Indian Institute of Science Education and Research Mohali, Knowledge City, Sector 81, SAS Nagar, PO Manauli, Mohali, Punjab, 140306, India
| | - Karan Bhatt
- Indian Institute of Science Education and Research Mohali, Knowledge City, Sector 81, SAS Nagar, PO Manauli, Mohali, Punjab, 140306, India
| | - Nagaraj Guru Prasad
- Indian Institute of Science Education and Research Mohali, Knowledge City, Sector 81, SAS Nagar, PO Manauli, Mohali, Punjab, 140306, India
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16
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Malenica N, Dunić JA, Vukadinović L, Cesar V, Šimić D. Genetic Approaches to Enhance Multiple Stress Tolerance in Maize. Genes (Basel) 2021; 12:genes12111760. [PMID: 34828366 PMCID: PMC8617808 DOI: 10.3390/genes12111760] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Revised: 10/27/2021] [Accepted: 11/03/2021] [Indexed: 12/29/2022] Open
Abstract
The multiple-stress effects on plant physiology and gene expression are being intensively studied lately, primarily in model plants such as Arabidopsis, where the effects of six stressors have simultaneously been documented. In maize, double and triple stress responses are obtaining more attention, such as simultaneous drought and heat or heavy metal exposure, or drought in combination with insect and fungal infestation. To keep up with these challenges, maize natural variation and genetic engineering are exploited. On one hand, quantitative trait loci (QTL) associated with multiple-stress tolerance are being identified by molecular breeding and genome-wide association studies (GWAS), which then could be utilized for future breeding programs of more resilient maize varieties. On the other hand, transgenic approaches in maize have already resulted in the creation of many commercial double or triple stress resistant varieties, predominantly weed-tolerant/insect-resistant and, additionally, also drought-resistant varieties. It is expected that first generation gene-editing techniques, as well as recently developed base and prime editing applications, in combination with the routine haploid induction in maize, will pave the way to pyramiding more stress tolerant alleles in elite lines/varieties on time.
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Affiliation(s)
- Nenad Malenica
- Division of Molecular Biology, Faculty of Science, University of Zagreb, Horvatovac 102a, 10000 Zagreb, Croatia;
| | - Jasenka Antunović Dunić
- Department of Biology, Josip Juraj Strossmayer University, Cara Hadrijana 8/A, 31000 Osijek, Croatia; (J.A.D.); (V.C.)
| | - Lovro Vukadinović
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia;
| | - Vera Cesar
- Department of Biology, Josip Juraj Strossmayer University, Cara Hadrijana 8/A, 31000 Osijek, Croatia; (J.A.D.); (V.C.)
- Faculty of Dental Medicine and Health, Josip Juraj Strossmayer University of Osijek, Crkvena 21, 31000 Osijek, Croatia
| | - Domagoj Šimić
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia;
- Centre of Excellence for Biodiversity and Molecular Plant Breeding (CroP-BioDiv), Svetošimunska 25, 10000 Zagreb, Croatia
- Correspondence: ; Tel.: +385-31-515-521
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17
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Santos MA, Carromeu-Santos A, Quina AS, Santos M, Matos M, Simões P. No evidence for short-term evolutionary response to a warming environment in Drosophila. Evolution 2021; 75:2816-2829. [PMID: 34617283 DOI: 10.1111/evo.14366] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 07/28/2021] [Accepted: 09/10/2021] [Indexed: 11/29/2022]
Abstract
Adaptive evolution is key in mediating responses to global warming and may sometimes be the only solution for species to survive. Such evolution will expectedly lead to changes in the populations' thermal reaction norm and improve their ability to cope with stressful conditions. Conversely, evolutionary constraints might limit the adaptive response. Here, we test these expectations by performing a real-time evolution experiment in historically differentiated Drosophila subobscura populations. We address the phenotypic change after nine generations of evolution in a daily fluctuating environment with average constant temperature, or in a warming environment with increasing average and amplitude temperature across generations. Our results showed that (1) evolution under a global warming scenario does not lead to a noticeable change in the thermal response; (2) historical background appears to be affecting responses under the warming environment, particularly at higher temperatures; and (3) thermal reaction norms are trait dependent: although lifelong exposure to low temperature decreases fecundity and productivity but not viability, high temperature causes negative transgenerational effects on productivity and viability, even with high fecundity. These findings in such an emblematic organism for thermal adaptation studies raise concerns about the short-term efficiency of adaptive responses to the current rising temperatures.
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Affiliation(s)
- Marta A Santos
- cE3c - Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal, 1749-016.,Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal, 1749-016
| | - Ana Carromeu-Santos
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal, 1749-016.,CESAM, Centre for Environmental and Marine Studies, Universidade de Aveiro, Aveiro, Portugal, 3810-193
| | - Ana S Quina
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal, 1749-016.,CESAM, Centre for Environmental and Marine Studies, Universidade de Aveiro, Aveiro, Portugal, 3810-193
| | - Mauro Santos
- cE3c - Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal, 1749-016.,Departament de Genètica i de Microbiologia, Grup de Genòmica, Bioinformàtica i Biologia Evolutiva (GBBE), Universitat Autònoma de Barcelona, Bellaterra, Spain, 08193
| | - Margarida Matos
- cE3c - Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal, 1749-016.,Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal, 1749-016
| | - Pedro Simões
- cE3c - Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal, 1749-016.,Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal, 1749-016
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18
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Shahrestani P, King E, Ramezan R, Phillips M, Riddle M, Thornburg M, Greenspan Z, Estrella Y, Garcia K, Chowdhury P, Malarat G, Zhu M, Rottshaefer SM, Wraight S, Griggs M, Vandenberg J, Long AD, Clark AG, Lazzaro BP. The molecular architecture of Drosophila melanogaster defense against Beauveria bassiana explored through evolve and resequence and quantitative trait locus mapping. G3-GENES GENOMES GENETICS 2021; 11:6371870. [PMID: 34534291 PMCID: PMC8664422 DOI: 10.1093/g3journal/jkab324] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Accepted: 08/17/2021] [Indexed: 12/02/2022]
Abstract
Little is known about the genetic architecture of antifungal immunity in natural populations. Using two population genetic approaches, quantitative trait locus (QTL) mapping and evolve and resequence (E&R), we explored D. melanogaster immune defense against infection with the fungus Beauveria bassiana. The immune defense was highly variable both in the recombinant inbred lines from the Drosophila Synthetic Population Resource used for our QTL mapping and in the synthetic outbred populations used in our E&R study. Survivorship of infection improved dramatically over just 10 generations in the E&R study, and continued to increase for an additional nine generations, revealing a trade-off with uninfected longevity. Populations selected for increased defense against B. bassiana evolved cross resistance to a second, distinct B. bassiana strain but not to bacterial pathogens. The QTL mapping study revealed that sexual dimorphism in defense depends on host genotype, and the E&R study indicated that sexual dimorphism also depends on the specific pathogen to which the host is exposed. Both the QTL mapping and E&R experiments generated lists of potentially causal candidate genes, although these lists were nonoverlapping.
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Affiliation(s)
- Parvin Shahrestani
- Department of Biological Science, California State University Fullerton, Fullerton CA, 92831, USA
| | - Elizabeth King
- Division of Biological Sciences, University of Missouri, Columbia MO, 65211, USA
| | - Reza Ramezan
- Department of Statistics and Actuarial Science, University of Waterloo, Waterloo ON, N2L 3G1, Canada
| | - Mark Phillips
- Department of Integrative Biology, Oregon State University, Corvallis OR, 97331, USA
| | - Melissa Riddle
- Department of Biological Science, California State University Fullerton, Fullerton CA, 92831, USA
| | - Marisa Thornburg
- Department of Biological Science, California State University Fullerton, Fullerton CA, 92831, USA
| | - Zachary Greenspan
- Department of Ecology and Evolutionary Biology, University of California Irvine, Irvine CA, 92692, USA
| | | | - Kelly Garcia
- Department of Entomology, Cornell University, Ithaca NY, 14853, USA
| | - Pratik Chowdhury
- Department of Entomology, Cornell University, Ithaca NY, 14853, USA
| | - Glen Malarat
- Department of Entomology, Cornell University, Ithaca NY, 14853, USA
| | - Ming Zhu
- Department of Entomology, Cornell University, Ithaca NY, 14853, USA
| | | | - Stephen Wraight
- USDA ARS Emerging Pets and Pathogens Research Unit, Robert W. Holley Center for Agriculture & Health, Ithaca NY, 14853, USA
| | - Michael Griggs
- USDA ARS Emerging Pets and Pathogens Research Unit, Robert W. Holley Center for Agriculture & Health, Ithaca NY, 14853, USA
| | - John Vandenberg
- USDA ARS Emerging Pets and Pathogens Research Unit, Robert W. Holley Center for Agriculture & Health, Ithaca NY, 14853, USA
| | - Anthony D Long
- Department of Ecology and Evolutionary Biology, University of California Irvine, Irvine CA, 92692, USA
| | - Andrew G Clark
- Department of Molecular Biology and Genetics, Cornell University, Ithaca NY, 14853, USA
| | - Brian P Lazzaro
- Department of Entomology, Cornell University, Ithaca NY, 14853, USA
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19
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St Leger RJ. Insects and their pathogens in a changing climate. J Invertebr Pathol 2021; 184:107644. [PMID: 34237297 DOI: 10.1016/j.jip.2021.107644] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2020] [Revised: 01/02/2021] [Accepted: 06/28/2021] [Indexed: 11/19/2022]
Abstract
The complex nature of climate change-mediated multitrophic interaction is an underexplored area, but has the potential to dramatically shift transmission and distribution of many insects and their pathogens, placing some populations closer to the brink of extinction. However, for individual insect-pathogen interactions climate change will have complicated hard-to-anticipate impacts. Thus, both pathogen virulence and insect host immunity are intrinsically linked with generalized stress responses, and in both pathogen and host have extensive trade-offs with nutrition (e.g., host plant quality), growth and reproduction. Potentially alleviating or exasperating these impacts, some pathogens and hosts respond genetically and rapidly to environmental shifts. This review identifies many areas for future research including a particular need to identify how altered global warming interacts with other environmental changes and stressors, and how consistent these impacts are across pathogens and hosts. With that achieved we would be closer to producing an overarching framework to integrate knowledge on all environmental interplay and infectious disease events.
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Affiliation(s)
- Raymond J St Leger
- Department of Entomology, University of Maryland, College Park, MD 20742, USA.
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20
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Singh D, Ramniwas S, Kumar G. Response to laboratory selection for darker and lighter body color phenotypes in Drosophila melanogaster: correlated changes for larval behavioral traits. ETHOL ECOL EVOL 2021. [DOI: 10.1080/03949370.2020.1845808] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Divya Singh
- University Center for Research and Development, Chandigarh University, Mohali 140413, India
| | - Seema Ramniwas
- University Center for Research and Development, Chandigarh University, Mohali 140413, India
| | - Girish Kumar
- Genomics and Bioinformatics Cluster, Department of Biology University of Central Florida, Orlando FL 32816, USA
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21
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Inskeep JR, Allen AP, Taylor PW, Rempoulakis P, Weldon CW. Canopy distribution and microclimate preferences of sterile and wild Queensland fruit flies. Sci Rep 2021; 11:13010. [PMID: 34155249 PMCID: PMC8217526 DOI: 10.1038/s41598-021-92218-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Accepted: 05/25/2021] [Indexed: 02/05/2023] Open
Abstract
Insects tend to live within well-defined habitats, and at smaller scales can have distinct microhabitat preferences. These preferences are important, but often overlooked, in applications of the sterile insect technique. Different microhabitat preferences of sterile and wild insects may reflect differences in environmental tolerance and may lead to spatial separation in the field, both of which may reduce the control program efficiency. In this study, we compared the diurnal microhabitat distributions of mass-reared (fertile and sterile) and wild Queensland fruit flies, Bactrocera tryoni (Froggatt) (Diptera: Tephritidae). Flies were individually tagged and released into field cages containing citrus trees. We recorded their locations in the canopies (height from ground, distance from canopy center), behavior (resting, grooming, walking, feeding), and the abiotic conditions on occupied leaves (temperature, humidity, light intensity) throughout the day. Flies from all groups moved lower in the canopy when temperature and light intensity were high, and humidity was low; lower canopy regions provided shelter from these conditions. Fertile and sterile mass-reared flies of both sexes were generally lower in the canopies than wild flies. Flies generally fed from the top sides of leaves that were lower in the canopy, suggesting food sources in these locations. Our observations suggest that mass-reared and wild B. tryoni occupy different locations in tree canopies, which could indicate different tolerances to environmental extremes and may result in spatial separation of sterile and wild flies when assessed at a landscape scale.
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Affiliation(s)
- Jess R Inskeep
- Applied BioSciences, Macquarie University, North Ryde, NSW, 2109, Australia.
- Vector Control, Hawaii Department of Health, Kahului, HI, 96732, USA.
| | - Andrew P Allen
- Department of Biological Sciences, Macquarie University, North Ryde, NSW, 2109, Australia
| | - Phillip W Taylor
- Applied BioSciences, Macquarie University, North Ryde, NSW, 2109, Australia
| | - Polychronis Rempoulakis
- Applied BioSciences, Macquarie University, North Ryde, NSW, 2109, Australia
- New South Wales Department of Primary Industries, Ourimbah, NSW, 2258, Australia
| | - Christopher W Weldon
- Department of Zoology and Entomology, University of Pretoria, Private Bag X20, Hatfield, 0083, South Africa
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22
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Abdelaal K, AlKahtani M, Attia K, Hafez Y, Király L, Künstler A. The Role of Plant Growth-Promoting Bacteria in Alleviating the Adverse Effects of Drought on Plants. BIOLOGY 2021; 10:520. [PMID: 34207963 PMCID: PMC8230635 DOI: 10.3390/biology10060520] [Citation(s) in RCA: 58] [Impact Index Per Article: 19.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/08/2021] [Revised: 06/08/2021] [Accepted: 06/09/2021] [Indexed: 11/29/2022]
Abstract
Plant growth-promoting bacteria play an essential role in enhancing the physical, chemical and biological characters of soils by facilitating nutrient uptake and water flow, especially under abiotic stress conditions, which are major constrains to agricultural development and production. Drought is one of the most harmful abiotic stress and perhaps the most severe problem facing agricultural sustainability, leading to a severe shortage in crop productivity. Drought affects plant growth by causing hormonal and membrane stability perturbations, nutrient imbalance and physiological disorders. Furthermore, drought causes a remarkable decrease in leaf numbers, relative water content, sugar yield, root yield, chlorophyll a and b and ascorbic acid concentrations. However, the concentrations of total phenolic compounds, electrolyte leakage, lipid peroxidation, amounts of proline, and reactive oxygen species are considerably increased because of drought stress. This negative impact of drought can be eliminated by using plant growth-promoting bacteria (PGPB). Under drought conditions, application of PGPB can improve plant growth by adjusting hormonal balance, maintaining nutrient status and producing plant growth regulators. This role of PGPB positively affects physiological and biochemical characteristics, resulting in increased leaf numbers, sugar yield, relative water content, amounts of photosynthetic pigments and ascorbic acid. Conversely, lipid peroxidation, electrolyte leakage and amounts of proline, total phenolic compounds and reactive oxygen species are decreased under drought in the presence of PGPB. The current review gives an overview on the impact of drought on plants and the pivotal role of PGPB in mitigating the negative effects of drought by enhancing antioxidant defense systems and increasing plant growth and yield to improve sustainable agriculture.
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Affiliation(s)
- Khaled Abdelaal
- Excellence Center (EPCRS), Plant Pathology and Biotechnology Laboratory, Faculty of Agriculture, Kafrelsheikh University, Kafr Elsheikh 33516, Egypt;
| | - Muneera AlKahtani
- Biology Department, College of Science, Princess Nourah Bint Abdulrahman University, Riyadh 11564, Saudi Arabia;
| | - Kotb Attia
- Center of Excellence in Biotechnology Research, King Saud University, Riyadh 11451, Saudi Arabia;
| | - Yaser Hafez
- Excellence Center (EPCRS), Plant Pathology and Biotechnology Laboratory, Faculty of Agriculture, Kafrelsheikh University, Kafr Elsheikh 33516, Egypt;
| | - Lóránt Király
- Centre for Agricultural Research, Plant Protection Institute, ELKH, 15 Herman Ottó Str., H-1022 Budapest, Hungary; (L.K.); (A.K.)
| | - András Künstler
- Centre for Agricultural Research, Plant Protection Institute, ELKH, 15 Herman Ottó Str., H-1022 Budapest, Hungary; (L.K.); (A.K.)
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23
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Zhu L, Hoffmann AA, Li S, Ma C. Extreme climate shifts pest dominance hierarchy through thermal evolution and transgenerational plasticity. Funct Ecol 2021. [DOI: 10.1111/1365-2435.13774] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Liang Zhu
- Climate Change Biology Research Group State Key Laboratory for Biology of Plant Diseases and Insect Pests Institute of Plant Protection Chinese Academy of Agricultural Sciences Beijing PR China
| | - Ary A. Hoffmann
- Pest and Disease Vector Group School of BioSiences Bio21 Institutethe University of Melbourne Melbourne Vic. Australia
| | - Shi‐Min Li
- Wucheng observation and Experiment Station of National Agricultural Science and Plant Protection Luohe Academy of Agricultural Sciences Luohe PR China
| | - Chun‐Sen Ma
- Climate Change Biology Research Group State Key Laboratory for Biology of Plant Diseases and Insect Pests Institute of Plant Protection Chinese Academy of Agricultural Sciences Beijing PR China
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24
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Mesas A, Jaramillo A, Castañeda LE. Experimental evolution on heat tolerance and thermal performance curves under contrasting thermal selection in Drosophila subobscura. J Evol Biol 2021; 34:767-778. [PMID: 33662149 DOI: 10.1111/jeb.13777] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 02/23/2021] [Accepted: 02/24/2021] [Indexed: 01/04/2023]
Abstract
Ectotherms can respond to global warming via evolutionary change of their upper thermal limits (CTmax ). Thus, the estimation of CTmax and its evolutionary potential is crucial to determine their vulnerability to global warming. However, CTmax estimations depend on the thermal stress intensity, and it is not completely clear whether its evolutionary capacity can be affected. Here, we performed an artificial selection experiment to increase heat tolerance using fast- and slow-ramping selection protocols in Drosophila subobscura. We found that heat tolerance evolved in both selection protocols, exhibiting similar evolutionary change rates and realized heritabilities. Additionally, we estimated the thermal performance curves (TPC) to evaluate correlated responses to selection on heat tolerance. We detected that thermal optimum increased in fast-ramping selection lines, but with a cost at the thermal performance breadth. Conversely, we did not detect changes in the TPC for the slow-ramping selection lines, indicating that thermal stress intensity has important effects on the evolution of thermal physiology of ectotherms. These findings, together with previous studies in D. subobscura reporting interpopulation variability and significant heritabilities for heat tolerance, suggest that evolutionary change can contribute to insect persistence in thermally changing environments and adaptation to global warming conditions.
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Affiliation(s)
- Andrés Mesas
- Laboratorio de Genómica y Biodiversidad, Departamento de Ciencias Básicas, Facultad de Ciencias, Universidad del Bío-Bío, Chillán, Chile
| | - Angélica Jaramillo
- Programa de Genética Humana, Instituto de Ciencias Biomédicas, Facultad de Medicina, Universidad de Chile, Santiago, Chile
| | - Luis E Castañeda
- Programa de Genética Humana, Instituto de Ciencias Biomédicas, Facultad de Medicina, Universidad de Chile, Santiago, Chile
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25
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Kawecki TJ, Erkosar B, Dupuis C, Hollis B, Stillwell RC, Kapun M. The Genomic Architecture of Adaptation to Larval Malnutrition Points to a Trade-off with Adult Starvation Resistance in Drosophila. Mol Biol Evol 2021; 38:2732-2749. [PMID: 33677563 PMCID: PMC8233504 DOI: 10.1093/molbev/msab061] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Periods of nutrient shortage impose strong selection on animal populations. Experimental studies of genetic adaptation to nutrient shortage largely focus on resistance to acute starvation at adult stage; it is not clear how conclusions drawn from these studies extrapolate to other forms of nutritional stress. We studied the genomic signature of adaptation to chronic juvenile malnutrition in six populations of Drosophila melanogaster evolved for 150 generations on an extremely nutrient-poor larval diet. Comparison with control populations evolved on standard food revealed repeatable genomic differentiation between the two set of population, involving >3,000 candidate SNPs forming >100 independently evolving clusters. The candidate genomic regions were enriched in genes implicated in hormone, carbohydrate, and lipid metabolism, including some with known effects on fitness-related life-history traits. Rather than being close to fixation, a substantial fraction of candidate SNPs segregated at intermediate allele frequencies in all malnutrition-adapted populations. This, together with patterns of among-population variation in allele frequencies and estimates of Tajima’s D, suggests that the poor diet results in balancing selection on some genomic regions. Our candidate genes for tolerance to larval malnutrition showed a high overlap with genes previously implicated in acute starvation resistance. However, adaptation to larval malnutrition in our study was associated with reduced tolerance to acute adult starvation. Thus, rather than reflecting synergy, the shared genomic architecture appears to mediate an evolutionary trade-off between tolerances to these two forms of nutritional stress.
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Affiliation(s)
- Tadeusz J Kawecki
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland
| | - Berra Erkosar
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland
| | - Cindy Dupuis
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland
| | - Brian Hollis
- EPFL, Department of Systems Biology, Lausanne, Switzerland.,Department of Biological Sciences, University of South Carolina, Columbia, SC, USA
| | - R Craig Stillwell
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland
| | - Martin Kapun
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.,Department of Evolutionary Biology and Environmental Studies, University of Zürich, Zürich, Switzerland.,Department of Cell and Developmental Biology, Medical University of Vienna, Vienna, Austria
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26
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Koch EL, Sbilordo SH, Guillaume F. Genetic variance in fitness and its cross‐sex covariance predict adaptation during experimental evolution. Evolution 2020; 74:2725-2740. [DOI: 10.1111/evo.14119] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Revised: 09/29/2020] [Accepted: 10/25/2020] [Indexed: 01/05/2023]
Affiliation(s)
- Eva L. Koch
- Department of Evolutionary Biology and Environmental Studies University of Zürich Winterthurerstr. 190 Zürich 8057 Switzerland
- Department of Animal and Plant Science University of Sheffield Western Bank Sheffield S10 2TN United Kingdom
| | - Sonja H. Sbilordo
- Department of Evolutionary Biology and Environmental Studies University of Zürich Winterthurerstr. 190 Zürich 8057 Switzerland
| | - Frédéric Guillaume
- Department of Evolutionary Biology and Environmental Studies University of Zürich Winterthurerstr. 190 Zürich 8057 Switzerland
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27
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Wood ZT, Shepard ID, Hurley ST, Paisker MR, Hensley VR, Kinnison MT. Sex-Dependent Cold Tolerance at the Northern Invasive Range Limit of Gambusia affinis on Cape Cod, Massachusetts. COPEIA 2020. [DOI: 10.1643/ce-19-332] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Affiliation(s)
- Zachary T. Wood
- Ecology and Environmental Sciences Program, School of Biology and Ecology, 5751 Murray Hall, University of Maine, Orono, Maine; (ZTW) . Send reprint requests to ZTW
| | - Isaac D. Shepard
- Ecology and Environmental Sciences Program, School of Biology and Ecology, 5751 Murray Hall, University of Maine, Orono, Maine; (ZTW) . Send reprint requests to ZTW
| | - Stephen T. Hurley
- Massachusetts Division of Fisheries & Wildlife, Buzzards Bay, Massachusetts
| | - Mitchell R. Paisker
- Ecology and Environmental Sciences Program, School of Biology and Ecology, 5751 Murray Hall, University of Maine, Orono, Maine; (ZTW) . Send reprint requests to ZTW
| | - Vanessa R. Hensley
- Ecology and Environmental Sciences Program, School of Biology and Ecology, 5751 Murray Hall, University of Maine, Orono, Maine; (ZTW) . Send reprint requests to ZTW
| | - Michael T. Kinnison
- Ecology and Environmental Sciences Program, School of Biology and Ecology, 5751 Murray Hall, University of Maine, Orono, Maine; (ZTW) . Send reprint requests to ZTW
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28
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Orr JA, Vinebrooke RD, Jackson MC, Kroeker KJ, Kordas RL, Mantyka-Pringle C, Van den Brink PJ, De Laender F, Stoks R, Holmstrup M, Matthaei CD, Monk WA, Penk MR, Leuzinger S, Schäfer RB, Piggott JJ. Towards a unified study of multiple stressors: divisions and common goals across research disciplines. Proc Biol Sci 2020; 287:20200421. [PMID: 32370677 DOI: 10.1098/rspb.2020.0421] [Citation(s) in RCA: 134] [Impact Index Per Article: 33.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Abstract
Anthropogenic environmental changes, or 'stressors', increasingly threaten biodiversity and ecosystem functioning worldwide. Multiple-stressor research is a rapidly expanding field of science that seeks to understand and ultimately predict the interactions between stressors. Reviews and meta-analyses of the primary scientific literature have largely been specific to either freshwater, marine or terrestrial ecology, or ecotoxicology. In this cross-disciplinary study, we review the state of knowledge within and among these disciplines to highlight commonality and division in multiple-stressor research. Our review goes beyond a description of previous research by using quantitative bibliometric analysis to identify the division between disciplines and link previously disconnected research communities. Towards a unified research framework, we discuss the shared goal of increased realism through both ecological and temporal complexity, with the overarching aim of improving predictive power. In a rapidly changing world, advancing our understanding of the cumulative ecological impacts of multiple stressors is critical for biodiversity conservation and ecosystem management. Identifying and overcoming the barriers to interdisciplinary knowledge exchange is necessary in rising to this challenge. Division between ecosystem types and disciplines is largely a human creation. Species and stressors cross these borders and so should the scientists who study them.
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Affiliation(s)
- James A Orr
- School of Natural Sciences, Trinity College Dublin, The University of Dublin, Dublin, Ireland
| | - Rolf D Vinebrooke
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada
| | | | - Kristy J Kroeker
- Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA
| | - Rebecca L Kordas
- Department of Life Sciences, Imperial College London, Silwood Park Campus, Berkshire, UK
| | - Chrystal Mantyka-Pringle
- School of Environment and Sustainability, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.,Wildlife Conservation Society Canada, Whitehorse, Yukon Territory, Canada
| | - Paul J Van den Brink
- Aquatic Ecology and Water Quality Management Group, Wageningen University, PO Box 47, 6700 AA Wageningen, The Netherlands.,Wageningen Environmental Research, PO Box 47, 6700 AA Wageningen, The Netherlands
| | - Frederik De Laender
- Research Unit of Environmental and Evolutionary Biology, Namur Institute of Complex Systems, and Institute of Life, Earth, and the Environment, University of Namur, Rue de Bruxelles 61, 5000 Namur, Belgium
| | - Robby Stoks
- Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Leuven, Belgium
| | | | | | - Wendy A Monk
- Environment and Climate Change Canada at Canadian Rivers Institute, Faculty of Forestry and Environmental Management, University of New Brunswick, Fredericton, New Brunswick, Canada
| | - Marcin R Penk
- School of Natural Sciences, Trinity College Dublin, The University of Dublin, Dublin, Ireland
| | - Sebastian Leuzinger
- Institute for Applied Ecology, Auckland University of Technology, Auckland, New Zealand
| | - Ralf B Schäfer
- Quantitative Landscape Ecology, iES-Institute for Environmental Sciences, University Koblenz-Landau, Landau in der Pfalz, Germany
| | - Jeremy J Piggott
- School of Natural Sciences, Trinity College Dublin, The University of Dublin, Dublin, Ireland
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29
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Gerken AR, Abts SR, Scully ED, Campbell JF. Artificial Selection to a Nonlethal Cold Stress in Trogoderma variabile Shows Associations With Chronic Cold Stress and Body Size. ENVIRONMENTAL ENTOMOLOGY 2020; 49:422-434. [PMID: 31913443 DOI: 10.1093/ee/nvz162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2019] [Indexed: 06/10/2023]
Abstract
Extreme temperature has been used as an alternative to chemical treatments for stored product pests for years. Resistance to heat or cold treatments has not been documented in stored product insects, but repeated use of ineffective treatments could lead to adaptive tolerance. Trogoderma variabile (Dermestidae) is a common pest of stored products, and the larval stage is highly resistant to cold and destructive. We artificially selected populations by inducing chill coma at four different cold temperature treatments: 3 and 5 h at -10°C and 3 and 5 h at 0°C. Recovery time was highly heritable after selection for seven generations for decreased recovery time (cold tolerance) and increased recovery time (cold susceptibility) at all time and temperature combinations. Three replicate populations for each time and temperature combination varied substantially, suggesting different mutations in each population were probably responsible for selected phenotypes. Body size decreased in populations selected for cold susceptibility compared with those selected for cold tolerance and survivorship to long-term cold stress increased in the cold-tolerant populations compared with the susceptible populations. After the cessation of the selection experiment, cold tolerance dissipated within four generations from the populations at -10°C, but was maintained in populations exposed to 0°C. Our results suggest that warehouse beetles can adapt to cold stress quickly, but in the absence of cold stress, the proportion of cold-tolerant/susceptible individuals is quickly reduced, suggesting that some of the mutations responsible for these phenotypes may be associated with fitness costs under normal conditions.
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Affiliation(s)
| | - Shelby R Abts
- USDA, Agricultural Research Service, Center for Grain and Animal Health Research, Manhattan, KS
| | - Erin D Scully
- USDA, Agricultural Research Service, Center for Grain and Animal Health Research, Manhattan, KS
| | - James F Campbell
- USDA, Agricultural Research Service, Center for Grain and Animal Health Research, Manhattan, KS
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30
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Pfenninger M, Foucault Q. Genomic processes underlying rapid adaptation of a natural
Chironomus riparius
population to unintendedly applied experimental selection pressures. Mol Ecol 2020; 29:536-548. [DOI: 10.1111/mec.15347] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 12/13/2019] [Accepted: 12/24/2019] [Indexed: 12/15/2022]
Affiliation(s)
- Markus Pfenninger
- Department of Molecular Ecology Senckenberg Biodiversity and Climate Research Centre Frankfurt am Main Germany
- Institute for Molecular and Organismic Evolution Johannes Gutenberg University Mainz Germany
- LOEWE Centre for Translational Biodiversity Genomics Senckenberg Biodiversity and Climate Research Centre Frankfurt am Main Germany
| | - Quentin Foucault
- Department of Molecular Ecology Senckenberg Biodiversity and Climate Research Centre Frankfurt am Main Germany
- Institute for Molecular and Organismic Evolution Johannes Gutenberg University Mainz Germany
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31
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Jiang W, Yang L, He Y, Zhang H, Li W, Chen H, Ma D, Yin J. Genome-wide identification and transcriptional expression analysis of superoxide dismutase (SOD) family in wheat ( Triticum aestivum). PeerJ 2019; 7:e8062. [PMID: 31763072 PMCID: PMC6873880 DOI: 10.7717/peerj.8062] [Citation(s) in RCA: 51] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2018] [Accepted: 10/20/2019] [Indexed: 12/17/2022] Open
Abstract
Superoxide dismutases (SODs) are a family of key antioxidant enzymes that play a crucial role in plant growth and development. Previously, this gene family has been investigated in Arabidopsis and rice. In the present study, a genome-wide analysis of the SOD gene family in wheat were performed. Twenty-six SOD genes were identified from the whole genome of wheat, including 17 Cu/Zn-SODs, six Fe-SODs, and three Mn-SODs. The chromosomal location mapping analysis indicated that these three types of SOD genes were only distributed on 2, 4, and 7 chromosomes, respectively. Phylogenetic analyses of wheat SODs and several other species revealed that these SOD proteins can be assigned to two major categories. SOD1 mainly comprises of Cu/Zn-SODs, and SOD2 mainly comprises of Fe-SODs and Mn-SODs. Gene structure and motif analyses indicated that most of the SOD genes showed a relatively conserved exon/intron arrangement and motif composition. Analyses of transcriptional data indicated that most of the wheat SOD genes were expressed in almost all of the examined tissues and had important functions in abiotic stress resistance. Finally, quantitative real-time polymerase chain reaction (qRT-PCR) analysis was used to reveal the regulating roles of wheat SOD gene family in response to NaCl, mannitol, and polyethylene glycol stresses. qRT-PCR showed that eight randomly selected genes with relatively high expression levels responded to all three stresses based on released transcriptome data. However, their degree of response and response patterns were different. Interestingly, among these genes, TaSOD1.7, TaSOD1.9, TaSOD2.1, and TaSOD2.3 feature research value owing to their remarkable expression-fold change in leaves or roots under different stresses. Overall, our results provide a basis of further functional research on the SOD gene family in wheat and facilitate their potential use for applications in the genetic improvement on wheat in drought and salt stress environments.
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Affiliation(s)
- Wenqiang Jiang
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Collaborative Innovation Center for Grain Industry/College of Agriculture, Yangtze University, Jingzhou, Hubei, China.,Institute of Plant Protection and Soil Science, Hubei Academy of Agricultural Sciences, Wuhan, Hubei, China.,Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China
| | - Lei Yang
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Collaborative Innovation Center for Grain Industry/College of Agriculture, Yangtze University, Jingzhou, Hubei, China
| | - Yiqin He
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Collaborative Innovation Center for Grain Industry/College of Agriculture, Yangtze University, Jingzhou, Hubei, China
| | - Haotian Zhang
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Collaborative Innovation Center for Grain Industry/College of Agriculture, Yangtze University, Jingzhou, Hubei, China
| | - Wei Li
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China
| | - Huaigu Chen
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China
| | - Dongfang Ma
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Collaborative Innovation Center for Grain Industry/College of Agriculture, Yangtze University, Jingzhou, Hubei, China.,Institute of Plant Protection and Soil Science, Hubei Academy of Agricultural Sciences, Wuhan, Hubei, China
| | - Junliang Yin
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Collaborative Innovation Center for Grain Industry/College of Agriculture, Yangtze University, Jingzhou, Hubei, China
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32
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Lara-Pérez LA, Arredondo J, Tejeda MT, Díaz-Fleischer F. Behavioral Responses and Pupa Development Patterns After Hypoxia or Anoxia in a Desiccation-Resistant Anastrepha ludens Strain. NEOTROPICAL ENTOMOLOGY 2019; 48:739-747. [PMID: 31093958 DOI: 10.1007/s13744-019-00690-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2018] [Accepted: 04/23/2019] [Indexed: 06/09/2023]
Abstract
The aim of this study was to experimentally test for adult cross-resistance to hypoxia or anoxia in a desiccation-resistant population of Anastrepha ludens Loew. We compared desiccation resistant flies with unselected (control) flies by measuring the effect of pre-emergence hypoxia on some fitness parameters (emergence, flight ability, copulation success, latency to copulation, copulation duration, ovary size). Anoxia effects were determined using eye color changes during pupa development and fly emergence after re-oxygenation. Both strains were negatively affected in all measured parameters when exposed to hypoxia for more than 48 h. However, after hypoxia, control flies showed, in general, shorter latency to mate and longer copula duration than desiccation-resistant flies. Anoxia-induced arrest of pupa development, whereas returning to normoxia conditions induced resumption of development. Anoxia period length (longer than 72 h) increased mortality to 100% in the control line, whereas the desiccation-resistant line survived even at 120 h of anoxia. Thus, pre-release hypoxia must not exceed 24 h in order to maintain insect quality independently of fly type.
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Affiliation(s)
- L A Lara-Pérez
- INBIOTECA, Univ Veracruzana, Av. de las Culturas Veracruzanas 101, Col. E. Zapata, Xalapa, Veracruz, Mexico
- Instituto Tecnológico de la Zona Maya, Tecnológico Nacional de México, Mexico City, Quintana Roo, Mexico
| | - J Arredondo
- Depto de Biología, Ecología y Comportamiento, Desarrollo de Métodos, Programa Moscafrut acuerdo SAGARPA-IICA, Metapa de Domínguez, Chiapas, Mexico
| | - M T Tejeda
- Depo de Filtrado Genético, Programa Moscamed acuerdo SAGARPA-IICA, Metapa de Domínguez, Mexico
| | - F Díaz-Fleischer
- INBIOTECA, Univ Veracruzana, Av. de las Culturas Veracruzanas 101, Col. E. Zapata, Xalapa, Veracruz, Mexico.
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33
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Sex and age specific reduction in stress resistance and mitochondrial DNA copy number in Drosophila melanogaster. Sci Rep 2019; 9:12305. [PMID: 31444377 PMCID: PMC6707197 DOI: 10.1038/s41598-019-48752-7] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Accepted: 08/07/2019] [Indexed: 01/01/2023] Open
Abstract
Environmental stresses such as extreme temperatures, dehydration and food deprivation may have distinct consequences for different age-classes and for males and females across species. Here we investigate a natural population of the model organism Drosophila melanogaster. Males and females at ages 3, 19 and 35 days were tested for stress resistance; i.e. the ability of flies to cope with starvation and both cold and hot temperatures. Further, we tested a measure of metabolic efficiency, namely mitochondrial DNA copy number (mtDNA CN) in both sexes at all three age-classes. We hypothesize that stress resistance is reduced at old age and more so in males, and that mtDNA CN is a biomarker for sex- and age-dependent reductions in the ability to cope with harsh environments. We show that: (1) males exhibit reduced starvation tolerance at old age, whereas older females are better in coping with periods without food compared to younger females, (2) heat tolerance decreases with increasing age in males but not in females, (3) cold tolerance is reduced at old age in both sexes, and (4) old males have reduced mtDNA CN whereas mtDNA CN slightly increases with age in females. In conclusion, our data provide strong evidence for trait and sex specific consequences of aging with females generally being better at coping with environmental stress at old age. The reduced mtDNA CN in old males suggests reduced metabolic efficiency and this may partly explain why males are less stress tolerant at old age than females. We suggest that mtDNA CN might be a suitable biomarker for physiological robustness. Our findings likely extend to other taxa than Drosophila and therefore we discuss the observations in relation to aging and sex specific lifespan across species.
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34
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Ko L, Harshman L, Hangartner S, Hoffmann A, Kachman S, Black P. Changes in lipid classes of Drosophila melanogaster in response to selection for three stress traits. JOURNAL OF INSECT PHYSIOLOGY 2019; 117:103890. [PMID: 31153895 DOI: 10.1016/j.jinsphys.2019.103890] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Revised: 05/29/2019] [Accepted: 05/29/2019] [Indexed: 06/09/2023]
Abstract
Laboratory selection on environmental stress traits is an evolutionary approach that is informative in the context of understanding stress adaptation. Here we characterize changes in a lipidome of Drosophila melanogaster in lines selected for increased heat (elevated heat knockdown refractoriness), cold (decreased time to recover from chill-coma) and desiccation survival. Selection for desiccation resistance resulted in changes in multiple lipid classes used to characterize a lipidome. This included a decrease in triacylglycerols (TAGs) which is relevant to interpretation of storage lipid levels in previous D. melanogaster desiccation survival selection experiments. Chill-coma recovery rate selection was expected to show extensive changes in lipid classes, but only phosphatidic acids exhibited significant change. Selection for increased heat knockdown resistance resulted in a substantial change in the abundance of a class of lipids (diacylglycerols) which could play a role in mediating the heat shock response or result in an increase in neutral lipid mobilization.
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Affiliation(s)
- Li Ko
- School of Biological Sciences, University of Nebraska Lincoln, 1104 T St, Lincoln, NE 68588, USA.
| | - Lawrence Harshman
- School of Biological Sciences, University of Nebraska Lincoln, 1104 T St, Lincoln, NE 68588, USA
| | - Sandra Hangartner
- School of Biological Sciences, The University of Melbourne, 30 Flemington Road, Parkville 3010, Australia
| | - Ary Hoffmann
- School of Biological Sciences, The University of Melbourne, 30 Flemington Road, Parkville 3010, Australia
| | - Steve Kachman
- Department of Statistics, University of Nebraska Lincoln, 340 Hardin Hall North Wing, Lincoln, NE 68583, USA
| | - Paul Black
- Department of Biochemistry, University of Nebraska Lincoln, 1901 Vince Street, Lincoln, NE 68588, USA
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35
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Zhao F, Xing K, Hoffmann AA, Ma CS. The importance of timing of heat events for predicting the dynamics of aphid pest populations. PEST MANAGEMENT SCIENCE 2019; 75:1866-1874. [PMID: 30663223 DOI: 10.1002/ps.5344] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2018] [Revised: 01/07/2019] [Accepted: 01/15/2019] [Indexed: 06/09/2023]
Abstract
BACKGROUND Heatwaves are increasing in frequency and there is growing interest in their impact on pest organisms. Previous work indicates that effects depend on the timing of the stress event, whose impact needs to be characterized across the full set of developmental stages and exposure periods of an organism. Here, we undertake such a detailed assessment using heat stress (20-35 °C diurnal cycle) across the nymph and adult stages of the English grain aphid, Sitobion avenae (Fabricius). RESULTS Stress-related mortality increased with stress duration at all stages; effects were less severe at the late nymphal stage. Effects on longevity adults after stress showed a complex pattern with nymphal heat stress, increasing with stress duration at the late nymphal stage, but decreasing with duration at the early nymphal stage. Longevity was also reduced by adult stress although to a lesser extent, and patterns were not connected to duration. Post-stress productivity decreased following adult and nymphal stress and the decrease tended to be correlated with stress duration. The rate of offspring production was more affected by adult stress than nymphal stress. Productivity and longevity effects, when combined, showed that the largest effect of heat stress occurred at the early nymphal stage. CONCLUSION These findings highlight the complex ways in which heat stress at a particular life stage influences later fitness and they also emphasize the importance of considering multiple fitness components when assessing stress effects. © 2019 Society of Chemical Industry.
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Affiliation(s)
- Fei Zhao
- Shanxi Key Laboratory of Integrated Pest Management in Agriculture, Institute of Plant Protection, Shanxi Academy of Agricultural Sciences, Taiyuan, China
- Climate Change Biology Research Group, State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Kun Xing
- Shanxi Key Laboratory of Integrated Pest Management in Agriculture, Institute of Plant Protection, Shanxi Academy of Agricultural Sciences, Taiyuan, China
| | - Ary A Hoffmann
- Pest and Environmental Adaptation Research Group, School of BioSciences, Bio21 Institute, The University of Melbourne, Parkville, Australia
| | - Chun-Sen Ma
- Climate Change Biology Research Group, State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
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36
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Villanueva JE, Livelo C, Trujillo AS, Chandran S, Woodworth B, Andrade L, Le HD, Manor U, Panda S, Melkani GC. Time-restricted feeding restores muscle function in Drosophila models of obesity and circadian-rhythm disruption. Nat Commun 2019; 10:2700. [PMID: 31221967 PMCID: PMC6586848 DOI: 10.1038/s41467-019-10563-9] [Citation(s) in RCA: 79] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2018] [Accepted: 05/16/2019] [Indexed: 12/19/2022] Open
Abstract
Pathological obesity can result from genetic predisposition, obesogenic diet, and circadian rhythm disruption. Obesity compromises function of muscle, which accounts for a majority of body mass. Behavioral intervention that can counteract obesity arising from genetic, diet or circadian disruption and can improve muscle function holds untapped potential to combat the obesity epidemic. Here we show that Drosophila melanogaster (fruit fly) subject to obesogenic challenges exhibits metabolic disease phenotypes in skeletal muscle; sarcomere disorganization, mitochondrial deformation, upregulation of Phospho-AKT level, aberrant intramuscular lipid infiltration, and insulin resistance. Imposing time-restricted feeding (TRF) paradigm in which flies were fed for 12 h during the day counteracts obesity-induced dysmetabolism and improves muscle performance by suppressing intramuscular fat deposits, Phospho-AKT level, mitochondrial aberrations, and markers of insulin resistance. Importantly, TRF was effective even in an irregular lighting schedule mimicking shiftwork. Hence, TRF is an effective dietary intervention for combating metabolic dysfunction arising from multiple causes.
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Affiliation(s)
- Jesús E Villanueva
- Department of Biology, Molecular Biology Institute and Heart Institute, San Diego State University, San Diego, CA, 92182, USA
| | - Christopher Livelo
- Department of Biology, Molecular Biology Institute and Heart Institute, San Diego State University, San Diego, CA, 92182, USA
| | - Adriana S Trujillo
- Department of Biology, Molecular Biology Institute and Heart Institute, San Diego State University, San Diego, CA, 92182, USA
| | - Sahaana Chandran
- Department of Biology, Molecular Biology Institute and Heart Institute, San Diego State University, San Diego, CA, 92182, USA
| | - Brendon Woodworth
- Department of Biology, Molecular Biology Institute and Heart Institute, San Diego State University, San Diego, CA, 92182, USA
| | - Leo Andrade
- Waitt Advanced Biophotonics Center, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA
| | - Hiep D Le
- Regulatory Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA
| | - Uri Manor
- Waitt Advanced Biophotonics Center, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA
| | - Satchidananda Panda
- Regulatory Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA
| | - Girish C Melkani
- Department of Biology, Molecular Biology Institute and Heart Institute, San Diego State University, San Diego, CA, 92182, USA.
- Regulatory Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA.
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37
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Stage-specific genotype-by-environment interactions for cold and heat hardiness in Drosophila melanogaster. Heredity (Edinb) 2019; 123:479-491. [PMID: 31164731 DOI: 10.1038/s41437-019-0236-9] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Revised: 04/29/2019] [Accepted: 05/05/2019] [Indexed: 12/18/2022] Open
Abstract
Environments often vary across a life cycle, imposing fluctuating natural selection across development. Such fluctuating selection can favor different phenotypes in different life stages, but stage-specific evolutionary responses will depend on genetic variance, covariance, and their interaction across development and across environments. Thus, quantifying how genetic architecture varies with plastic responses to the environment and across development is vital to predict whether stage-specific adaptation will occur in nature. Additionally, the interaction of genetic variation and environmental plasticity (GxE) may be stage-specific, leading to a three-way interaction between genotype, environment, and development or GxDxE. To test for these patterns, we exposed larvae and adults of Drosophila melanogaster isogenic lines derived from a natural population to extreme heat and cold stress after developmental acclimation to cool (18 °C) and warm (25 °C) conditions and measured genetic variance for thermal hardiness. We detected significant GxE that was specific to larvae and adults for cold and heat hardiness (GxDxE), but no significant genetic correlation across development for either trait at either acclimation temperature. However, cross-development phenotypic correlations for acclimation responses suggest that plasticity itself may be developmentally constrained, though rigorously testing this hypothesis requires more experimentation. These results illustrate the potential for stage-specific adaptation within a complex life cycle and demonstrate the importance of measuring traits at appropriate developmental stages and environmental conditions when predicting evolutionary responses to changing climates.
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38
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Zhang C, Jansen M, De Meester L, Stoks R. Rapid evolution in response to warming does not affect the toxicity of a pollutant: Insights from experimental evolution in heated mesocosms. Evol Appl 2019; 12:977-988. [PMID: 31080509 PMCID: PMC6503828 DOI: 10.1111/eva.12772] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Revised: 12/22/2018] [Accepted: 12/28/2018] [Indexed: 01/14/2023] Open
Abstract
While human-induced stressors such as warming and pollutants may co-occur and interact, evolutionary studies typically focus on single stressors. Rapid thermal evolution may help organisms better deal with warming, yet it remains an open question whether thermal evolution changes the toxicity of pollutants under warming. We investigated the effects of exposure to a novel pollutant (zinc oxide nanoparticles, nZnO) and 4°C warming (20°C vs. 24°C) on key life history and physiological traits of the water flea Daphnia magna, a keystone species in aquatic ecosystems. To address the role of thermal evolution, we compared these effects between clones from an experimental evolution trial where animals were kept for two years in outdoor mesocosms at ambient temperatures or ambient +4°C. The nZnO was more toxic at 20°C than at 24°C: only at 20°C, it caused reductions in early fecundity, intrinsic growth rate and metabolic activity. This was due to a higher accumulated zinc burden at 20°C than at 24°C, which was associated with an upregulation of a metallothionein gene at 20°C but not at 24°C. Clones from the heated mesocosms better dealt with warming than clones from the ambient mesocosms, indicating rapid thermal evolution. Notably, rapid thermal evolution did not change the toxicity of nZnO, neither at 20°C nor at 24°C, suggesting no pleiotropy or metabolic trade-offs were at work under the current experimental design. Evaluating whether thermal evolution influences the toxicity of pollutants is important for ecological risk assessment. It provides key information to extrapolate laboratory-derived toxicity estimates of pollutants both in space to warmer regions and in time under future global warming scenarios. In general, studying how the evolution of tolerance to one anthropogenic stressor influence tolerance to other anthropogenic stressors should get more attention in a rapidly changing world where animals increasingly face combinations of stressors.
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Affiliation(s)
- Chao Zhang
- Evolutionary Stress Ecology and EcotoxicologyKU LeuvenLeuvenBelgium
- Laboratory of Aquatic Ecology, Evolution and ConservationKU LeuvenLeuvenBelgium
| | - Mieke Jansen
- Laboratory of Aquatic Ecology, Evolution and ConservationKU LeuvenLeuvenBelgium
| | - Luc De Meester
- Laboratory of Aquatic Ecology, Evolution and ConservationKU LeuvenLeuvenBelgium
| | - Robby Stoks
- Evolutionary Stress Ecology and EcotoxicologyKU LeuvenLeuvenBelgium
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39
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Deepashree S, Niveditha S, Shivanandappa T, Ramesh SR. Oxidative stress resistance as a factor in aging: evidence from an extended longevity phenotype of Drosophila melanogaster. Biogerontology 2019; 20:497-513. [DOI: 10.1007/s10522-019-09812-7] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2019] [Accepted: 04/24/2019] [Indexed: 01/08/2023]
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40
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Everman ER, McNeil CL, Hackett JL, Bain CL, Macdonald SJ. Dissection of Complex, Fitness-Related Traits in Multiple Drosophila Mapping Populations Offers Insight into the Genetic Control of Stress Resistance. Genetics 2019; 211:1449-1467. [PMID: 30760490 PMCID: PMC6456312 DOI: 10.1534/genetics.119.301930] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2018] [Accepted: 02/06/2019] [Indexed: 12/11/2022] Open
Abstract
We leverage two complementary Drosophila melanogaster mapping panels to genetically dissect starvation resistance-an important fitness trait. Using >1600 genotypes from the multiparental Drosophila Synthetic Population Resource (DSPR), we map numerous starvation stress QTL that collectively explain a substantial fraction of trait heritability. Mapped QTL effects allowed us to estimate DSPR founder phenotypes, predictions that were correlated with the actual phenotypes of these lines. We observe a modest phenotypic correlation between starvation resistance and triglyceride level, traits that have been linked in previous studies. However, overlap among QTL identified for each trait is low. Since we also show that DSPR strains with extreme starvation phenotypes differ in desiccation resistance and activity level, our data imply multiple physiological mechanisms contribute to starvation variability. We additionally exploited the Drosophila Genetic Reference Panel (DGRP) to identify sequence variants associated with starvation resistance. Consistent with prior work these sites rarely fall within QTL intervals mapped in the DSPR. We were offered a unique opportunity to directly compare association mapping results across laboratories since two other groups previously measured starvation resistance in the DGRP. We found strong phenotypic correlations among studies, but extremely low overlap in the sets of genomewide significant sites. Despite this, our analyses revealed that the most highly associated variants from each study typically showed the same additive effect sign in independent studies, in contrast to otherwise equivalent sets of random variants. This consistency provides evidence for reproducible trait-associated sites in a widely used mapping panel, and highlights the polygenic nature of starvation resistance.
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Affiliation(s)
- Elizabeth R Everman
- Department of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045
| | - Casey L McNeil
- Department of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045
| | - Jennifer L Hackett
- Department of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045
| | - Clint L Bain
- Department of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045
| | - Stuart J Macdonald
- Department of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045
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41
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Wang A, Singh A, Huang Y, Agrawal AF. Ecological specialization in populations adapted to constant versus heterogeneous environments. Evolution 2019; 73:1309-1317. [PMID: 30912125 DOI: 10.1111/evo.13725] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Accepted: 02/26/2019] [Indexed: 11/27/2022]
Abstract
Populations vary in their degree of ecological specialization. An intuitive, but often untested, hypothesis is that populations evolving under greater environmental heterogeneity will evolve to be less specialized. How important is environmental heterogeneity in explaining among-population variation in specialization? We assessed juvenile viability of 20 Drosophila melanogaster populations evolving under one of four regimes: (1) a salt-enriched environment, (2) a cadmium-enriched environment, (3) a temporally varying environment, and (4) a spatially varying environment. Juvenile viability was tested in both the original selective environments and a set of novel environments. In both the original and novel environments, populations from the constant cadmium regime had the lowest average viability and the highest variance in viability across environments but populations from the other three regimes were similar. Our results suggest that variation in specialization among these populations is most simply explained as a pleiotropic by-product of adaptation to specific environments rather than resulting from a history of exposure to environmental heterogeneity.
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Affiliation(s)
- Ao Wang
- Department of Ecology & Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada
| | - Amardeep Singh
- Department of Ecology & Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada
| | - Yuheng Huang
- Department of Ecology & Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada
| | - Aneil F Agrawal
- Department of Ecology & Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada
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42
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May CM, van den Heuvel J, Doroszuk A, Hoedjes KM, Flatt T, Zwaan BJ. Adaptation to developmental diet influences the response to selection on age at reproduction in the fruit fly. J Evol Biol 2019; 32:425-437. [PMID: 30735275 PMCID: PMC6850652 DOI: 10.1111/jeb.13425] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2017] [Accepted: 02/04/2019] [Indexed: 11/30/2022]
Abstract
Experimental evolution (EE) is a powerful tool for addressing how environmental factors influence life-history evolution. While in nature different selection pressures experienced across the lifespan shape life histories, EE studies typically apply selection pressures one at a time. Here, we assess the consequences of adaptation to three different developmental diets in combination with classical selection for early or late reproduction in the fruit fly Drosophila melanogaster. We find that the response to each selection pressure is similar to that observed when they are applied independently, but the overall magnitude of the response depends on the selection regime experienced in the other life stage. For example, adaptation to increased age at reproduction increased lifespan across all diets; however, the extent of the increase was dependent on the dietary selection regime. Similarly, adaptation to a lower calorie developmental diet led to faster development and decreased adult weight, but the magnitude of the response was dependent on the age-at-reproduction selection regime. Given that multiple selection pressures are prevalent in nature, our findings suggest that trade-offs should be considered not only among traits within an organism, but also among adaptive responses to different-sometimes conflicting-selection pressures, including across life stages.
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Affiliation(s)
- Christina M May
- Laboratory of Genetics, Wageningen University, Wageningen, the Netherlands
| | - Joost van den Heuvel
- Laboratory of Genetics, Wageningen University, Wageningen, the Netherlands.,Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne, UK
| | - Agnieszka Doroszuk
- Laboratory of Genetics, Wageningen University, Wageningen, the Netherlands.,Rijk Zwaan, Hague, the Netherlands
| | - Katja M Hoedjes
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland
| | - Thomas Flatt
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.,Department of Biology, University of Fribourg, Fribourg, Switzerland
| | - Bas J Zwaan
- Laboratory of Genetics, Wageningen University, Wageningen, the Netherlands
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43
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Brown EB, Slocumb ME, Szuperak M, Kerbs A, Gibbs AG, Kayser MS, Keene AC. Starvation resistance is associated with developmentally specified changes in sleep, feeding and metabolic rate. J Exp Biol 2019; 222:jeb191049. [PMID: 30606795 PMCID: PMC6381993 DOI: 10.1242/jeb.191049] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Accepted: 12/11/2018] [Indexed: 11/20/2022]
Abstract
Food shortage represents a primary challenge to survival, and animals have adapted diverse developmental, physiological and behavioral strategies to survive when food becomes unavailable. Starvation resistance is strongly influenced by ecological and evolutionary history, yet the genetic basis for the evolution of starvation resistance remains poorly understood. The fruit fly Drosophila melanogaster provides a powerful model for leveraging experimental evolution to investigate traits associated with starvation resistance. While control populations only live a few days without food, selection for starvation resistance results in populations that can survive weeks. We have previously shown that selection for starvation resistance results in increased sleep and reduced feeding in adult flies. Here, we investigate the ontogeny of starvation resistance-associated behavioral and metabolic phenotypes in these experimentally selected flies. We found that selection for starvation resistance resulted in delayed development and a reduction in metabolic rate in larvae that persisted into adulthood, suggesting that these traits may allow for the accumulation of energy stores and an increase in body size within these selected populations. In addition, we found that larval sleep was largely unaffected by starvation selection and that feeding increased during the late larval stages, suggesting that experimental evolution for starvation resistance produces developmentally specified changes in behavioral regulation. Together, these findings reveal a critical role for development in the evolution of starvation resistance and indicate that selection can selectively influence behavior during defined developmental time points.
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Affiliation(s)
- Elizabeth B Brown
- Department of Biological Sciences, Florida Atlantic University, Jupiter, FL 33458, USA
| | - Melissa E Slocumb
- Department of Biological Sciences, Florida Atlantic University, Jupiter, FL 33458, USA
| | - Milan Szuperak
- Departments of Psychiatry and Neuroscience, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Arianna Kerbs
- Department of Biological Sciences, Florida Atlantic University, Jupiter, FL 33458, USA
| | - Allen G Gibbs
- Department of Life Sciences, University of Nevada Las Vegas, Las Vegas, NV 89154, USA
| | - Matthew S Kayser
- Departments of Psychiatry and Neuroscience, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Alex C Keene
- Department of Biological Sciences, Florida Atlantic University, Jupiter, FL 33458, USA
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44
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Incorporating temperature and precipitation extremes into process-based models of African lepidoptera changes the predicted distribution under climate change. Ecol Modell 2019. [DOI: 10.1016/j.ecolmodel.2018.12.017] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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45
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Stazione L, Norry F, Sambucetti P. Heat-hardening effects on mating success at high temperature in Drosophila melanogaster. J Therm Biol 2019; 80:172-177. [DOI: 10.1016/j.jtherbio.2019.02.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2018] [Revised: 01/05/2019] [Accepted: 02/01/2019] [Indexed: 10/27/2022]
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46
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Curtsinger JW. Fecundity for free? Enhanced oviposition in longevous populations of Drosophila melanogaster. Biogerontology 2019; 20:397-404. [PMID: 30603852 DOI: 10.1007/s10522-018-09791-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2018] [Accepted: 12/20/2018] [Indexed: 11/27/2022]
Abstract
Artificial selection for increased life span in experimental populations of Drosophila melanogaster sometimes produces long-lived populations that exhibit greater fecundity than unselected controls. The absence of a trade-off between survival and reproduction in these cases might be an artefact of the rich diet of typical lab culture; if nutritional resources are not limiting then there may be no need to trade off. Here I test the rich diet hypothesis by estimating genetic correlations between survival and age-specific fecundity in three nutritional environments. Experimental material consists of 58 recombinant inbred lines derived from an artificial selection experiment. Reducing the yeast content of medium causes substantial reductions in fecundity but does not alter patterns of genetic correlation. The correlation between life span and early fecundity is non-significant in all environments, while the life span correlations with mid-life fecundity are positive and statistically significant in all environments. The rich diet hypothesis is rejected. Qualitative features of fecundity trajectories are conserved across environments, with long-lived lines exhibiting a secondary peak of oviposition in mid-life. The micro-evolution of extended life span is not a monolithic process and does not necessarily involve direct trade-offs between survival and reproduction.
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Affiliation(s)
- James W Curtsinger
- Department of Ecology, Evolution, & Behavior, University of Minnesota Twin Cities, 1987 Upper Buford Circle, St. Paul, MN, 55108, USA.
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47
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Michalak P, Kang L, Schou MF, Garner HR, Loeschcke V. Genomic signatures of experimental adaptive radiation in Drosophila. Mol Ecol 2018; 28:600-614. [PMID: 30375065 DOI: 10.1111/mec.14917] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2018] [Revised: 10/03/2018] [Accepted: 10/17/2018] [Indexed: 12/12/2022]
Abstract
Abiotic environmental factors play a fundamental role in determining the distribution, abundance and adaptive diversification of species. Empowered by new technologies enabling rapid and increasingly accurate examination of genomic variation in populations, researchers may gain new insights into the genomic background of adaptive radiation and stress resistance. We investigated genomic variation across generations of large-scale experimental selection regimes originating from a single founder population of Drosophila melanogaster, diverging in response to ecologically relevant environmental stressors: heat shock, heat knock down, cold shock, desiccation and starvation. When compared to the founder population, and to parallel unselected controls, there were more than 100,000 single nucleotide polymorphisms (SNPs) displaying consistent allelic changes in response to selective pressures across generations. These SNPs were found in both coding and noncoding sequences, with the highest density in promoter regions, and involved a broad range of functionalities, including molecular chaperoning by heat-shock proteins. The SNP patterns were highly stressor-specific despite considerable variation among line replicates within each selection regime, as reflected by a principal component analysis, and co-occurred with selective sweep regions. Only ~15% of SNPs with putatively adaptive changes were shared by at least two selective regimes, while less than 1% of SNPs diverged in opposite directions. Divergent stressors driving evolution in the experimental system of adaptive radiation left distinct genomic signatures, most pronounced in starvation and heat-shock selection regimes.
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Affiliation(s)
- Pawel Michalak
- Edward Via College of Osteopathic Medicine, Blacksburg, Virginia.,One Health Research Center, Virginia-Maryland College of Veterinary Medicine, Blacksburg, Virginia.,Institute of Evolution, University of Haifa, Haifa, Israel
| | - Lin Kang
- Edward Via College of Osteopathic Medicine, Blacksburg, Virginia
| | - Mads F Schou
- Department of Bioscience, Aarhus University, Aarhus, Denmark
| | - Harold R Garner
- Edward Via College of Osteopathic Medicine, Blacksburg, Virginia.,The Gibbs Cancer Center and Research Institute, Spartanburg, SC, USA
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48
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Rajpurohit S, Gefen E, Bergland AO, Petrov DA, Gibbs AG, Schmidt P. Spatiotemporal dynamics and genome-wide association genome-wide association analysis of desiccation tolerance in Drosophila melanogaster. Mol Ecol 2018; 27:3525-3540. [PMID: 30051644 PMCID: PMC6129450 DOI: 10.1111/mec.14814] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2016] [Revised: 06/11/2018] [Accepted: 06/20/2018] [Indexed: 12/13/2022]
Abstract
Water availability is a major environmental challenge to a variety of terrestrial organisms. In insects, desiccation tolerance varies predictably over spatial and temporal scales and is an important physiological determinant of fitness in natural populations. Here, we examine the dynamics of desiccation tolerance in North American populations of Drosophila melanogaster using: (a) natural populations sampled across latitudes and seasons; (b) experimental evolution in field mesocosms over seasonal time; (c) genome-wide associations to identify SNPs/genes associated with variation for desiccation tolerance; and (d) subsequent analysis of patterns of clinal/seasonal enrichment in existing pooled sequencing data of populations sampled in both North America and Australia. A cline in desiccation tolerance was observed, for which tolerance exhibited a positive association with latitude; tolerance also varied predictably with culture temperature, demonstrating a significant degree of thermal plasticity. Desiccation tolerance evolved rapidly in field mesocosms, although only males showed differences in desiccation tolerance between spring and autumn collections from natural populations. Water loss rates did not vary significantly among latitudinal or seasonal populations; however, changes in metabolic rates during prolonged exposure to dry conditions are consistent with increased tolerance in higher latitude populations. Genome-wide associations in a panel of inbred lines identified twenty-five SNPs in twenty-one loci associated with sex-averaged desiccation tolerance, but there is no robust signal of spatially varying selection on genes associated with desiccation tolerance. Together, our results suggest that desiccation tolerance is a complex and important fitness component that evolves rapidly and predictably in natural populations.
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Affiliation(s)
- Subhash Rajpurohit
- Department of Biology, University of Pennsylvania, 433 S. University Ave, Philadelphia, PA 19104, USA
| | - Eran Gefen
- Department of Biology, University of Haifa-Oranim, Tivon 36006, Israel
| | - Alan O. Bergland
- Department of Biology, University of Virginia, Charlottesville, VA 22903
| | - Dmitri A. Petrov
- Department of Biology, Stanford University, Stanford, CA 94305, USA
| | - Allen G. Gibbs
- School of Life Sciences, University of Nevada, Las Vegas, NV 89154, USA
| | - Paul Schmidt
- Department of Biology, University of Pennsylvania, 433 S. University Ave, Philadelphia, PA 19104, USA
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49
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Bacterial Methionine Metabolism Genes Influence Drosophila melanogaster Starvation Resistance. Appl Environ Microbiol 2018; 84:AEM.00662-18. [PMID: 29934334 DOI: 10.1128/aem.00662-18] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2018] [Accepted: 05/25/2018] [Indexed: 11/20/2022] Open
Abstract
Animal-associated microorganisms (microbiota) dramatically influence the nutritional and physiological traits of their hosts. To expand our understanding of such influences, we predicted bacterial genes that influence a quantitative animal trait by a comparative genomic approach, and we extended these predictions via mutant analysis. We focused on Drosophila melanogaster starvation resistance (SR). We first confirmed that D. melanogaster SR responds to the microbiota by demonstrating that bacterium-free flies have greater SR than flies bearing a standard 5-species microbial community, and we extended this analysis by revealing the species-specific influences of 38 genome-sequenced bacterial species on D. melanogaster SR. A subsequent metagenome-wide association analysis predicted bacterial genes with potential influence on D. melanogaster SR, among which were significant enrichments in bacterial genes for the metabolism of sulfur-containing amino acids and B vitamins. Dietary supplementation experiments established that the addition of methionine, but not B vitamins, to the diets significantly lowered D. melanogaster SR in a way that was additive, but not interactive, with the microbiota. A direct role for bacterial methionine metabolism genes in D. melanogaster SR was subsequently confirmed by analysis of flies that were reared individually with distinct methionine cycle Escherichia coli mutants. The correlated responses of D. melanogaster SR to bacterial methionine metabolism mutants and dietary modification are consistent with the established finding that bacteria can influence fly phenotypes through dietary modification, although we do not provide explicit evidence of this conclusion. Taken together, this work reveals that D. melanogaster SR is a microbiota-responsive trait, and specific bacterial genes underlie these influences.IMPORTANCE Extending descriptive studies of animal-associated microorganisms (microbiota) to define causal mechanistic bases for their influence on animal traits is an emerging imperative. In this study, we reveal that D. melanogaster starvation resistance (SR), a model quantitative trait in animal genetics, responds to the presence and identity of the microbiota. Using a predictive analysis, we reveal that the amino acid methionine has a key influence on D. melanogaster SR and show that bacterial methionine metabolism mutants alter normal patterns of SR in flies bearing the bacteria. Our data further suggest that these effects are additive, and we propose the untested hypothesis that, similar to bacterial effects on fruit fly triacylglyceride deposition, the bacterial influence may be through dietary modification. Together, these findings expand our understanding of the bacterial genetic basis for influence on a nutritionally relevant trait of a model animal host.
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50
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Karve SM, Bhave D, Dey S. Extent of adaptation is not limited by unpredictability of the environment in laboratory populations of Escherichia coli. J Evol Biol 2018; 31:1420-1426. [PMID: 29927015 DOI: 10.1111/jeb.13338] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2018] [Accepted: 06/19/2018] [Indexed: 11/30/2022]
Abstract
Environmental variability is on the rise in different parts of the earth, and the survival of many species depends on how well they cope with these fluctuations. Our current understanding of how organisms adapt to unpredictably fluctuating environments is almost entirely based on studies that investigate fluctuations among different values of a single environmental stressor such as temperature or pH. How would unpredictability affect adaptation when the environment fluctuates between qualitatively very different kinds of stresses? To answer this question, we subjected laboratory populations of Escherichia coli to selection over ~ 260 generations. The populations faced predictable and unpredictable environmental fluctuations across qualitatively different selection environments, namely, salt and acidic pH. We show that predictability of environmental fluctuations does not play a role in determining the extent of adaptation, although the extent of ancestral adaptation to the chosen selection environments is of key importance.
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Affiliation(s)
- Shraddha M Karve
- Population Biology Laboratory, Biology Division, Indian Institute of Science Education and Research Pune, Pune, Maharashtra, India
| | - Devika Bhave
- Population Biology Laboratory, Biology Division, Indian Institute of Science Education and Research Pune, Pune, Maharashtra, India
| | - Sutirth Dey
- Population Biology Laboratory, Biology Division, Indian Institute of Science Education and Research Pune, Pune, Maharashtra, India
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