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Sharpe DMT, Valverde MP, De León LF, Hendry AP, Torchin ME. Biological invasions alter the structure of a tropical freshwater food web. Ecology 2023; 104:e4173. [PMID: 37768609 DOI: 10.1002/ecy.4173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Accepted: 08/25/2023] [Indexed: 09/29/2023]
Abstract
Biological invasions are expected to alter food web structure, but there are limited empirical data directly comparing invaded versus uninvaded food webs, particularly in species-rich, tropical systems. We characterize for the first time the food web of Lake Gatun-a diverse and highly invaded tropical freshwater lake within the Panama Canal. We used stable isotope analysis to reconstruct the trophic structure of the fish community of Lake Gatun and to compare it to that of a minimally invaded reference lake, Lake Bayano. We found significant differences between the trophic structures of these two Neotropical lakes, notably that Lake Gatun's fish community was characterized by a longer food chain, greater isotopic diversity, a broader range of trophic positions and body sizes, and shifts in the isotopic positions of several native taxa relative to Lake Bayano. The degree of isotopic overlap between native and non-native trophic guilds in Lake Gatun was variable, with herbivores exhibiting the lowest (20%-29%) overlap and carnivores the greatest (81%-100%). Overall, our results provide some of the first empirical evidence for the ways in which multiple introduced and native species may partition isotopic space in a species-rich tropical freshwater food web.
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Affiliation(s)
- Diana M T Sharpe
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, USA
- Department of Biology, McGill University, Montréal, Québec, Canada
- Smithsonian Tropical Research Institute, Panama City, Panama
| | - Marisol P Valverde
- Department of Biology, McGill University, Montréal, Québec, Canada
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, New York, USA
| | - Luis F De León
- Smithsonian Tropical Research Institute, Panama City, Panama
- Department of Biology, University of Massachusetts Boston, Boston, Massachusetts, USA
- Instituto de Investigaciones Cientificas y Servicios de Alta Tecnologia, Centro de Biodiversidad y Descubrimiento de Drogas, Panama City, Panama
| | - Andrew P Hendry
- Department of Biology, McGill University, Montréal, Québec, Canada
| | - Mark E Torchin
- Smithsonian Tropical Research Institute, Panama City, Panama
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2
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Leroy B, Bellard C, Dias MS, Hugueny B, Jézéquel C, Leprieur F, Oberdorff T, Robuchon M, Tedesco PA. Major shifts in biogeographic regions of freshwater fishes as evidence of the Anthropocene epoch. SCIENCE ADVANCES 2023; 9:eadi5502. [PMID: 37976358 PMCID: PMC10656075 DOI: 10.1126/sciadv.adi5502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Accepted: 10/17/2023] [Indexed: 11/19/2023]
Abstract
Animals and plants worldwide are structured in global biogeographic regions, which were shaped by major geologic forces during Earth history. Recently, humans have changed the course of events by multiplying global pathways of introduction for nonindigenous species and propagating local species extirpations. Here, we report on how introductions and extirpations have changed the distributions of freshwater fishes worldwide and how it affected their natural biogeographic regions. We found major shifts in natural regions, with the emergence of an intercontinental region arising from the fusion of multiple faunas, which we named Pan-Anthropocenian Global North and East Asia (PAGNEA). The PAGNEA region is evocative of the Pangea supercontinent, as flows of introductions show that dispersal has become possible again across multiple continents, suggesting that human activities have superseded natural geological forces. Our results constitute evidence on the expected modification of biostratigraphic boundaries based on freshwater fish, which are abundant in the fossil record, thereby supporting the concept of the Anthropocene epoch.
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Affiliation(s)
- Boris Leroy
- Unité Biologie des Organismes et Ecosystèmes Aquatiques (BOREA, UMR 8067), Muséum national d’Histoire naturelle, Sorbonne Université, Université de Caen Normandie, CNRS, IRD, Université des Antilles, Paris, France
| | - Céline Bellard
- Université Paris-Saclay, CNRS, AgroParisTech, Ecologie Systématique Evolution, Gif-sur-Yvette, France
| | - Murilo S. Dias
- Departamento de Ecologia, Instituto de Ciências Biológicas, Universidade de Brasília (UnB), Brasília-DF, Brazil
| | - Bernard Hugueny
- UMR5174 EDB (Laboratoire Evolution et Diversité Biologique), CNRS, IRD, UPS, Université Paul Sabatier, F-31062 Toulouse, France
| | - Céline Jézéquel
- UMR5174 EDB (Laboratoire Evolution et Diversité Biologique), CNRS, IRD, UPS, Université Paul Sabatier, F-31062 Toulouse, France
| | - Fabien Leprieur
- MARBEC, Univ Montpellier, IRD, CNRS, IFREMER, Montpellier, France
| | - Thierry Oberdorff
- UMR5174 EDB (Laboratoire Evolution et Diversité Biologique), CNRS, IRD, UPS, Université Paul Sabatier, F-31062 Toulouse, France
| | - Marine Robuchon
- Joint Research Centre (JRC) of the European Commission, Directorate for Sustainable Resources, 21027 Ispra (VA), Italy
| | - Pablo A. Tedesco
- UMR5174 EDB (Laboratoire Evolution et Diversité Biologique), CNRS, IRD, UPS, Université Paul Sabatier, F-31062 Toulouse, France
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3
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Arranz I, Grenouillet G, Cucherousset J. Human pressures modulate climate-warming-induced changes in size spectra of stream fish communities. Nat Ecol Evol 2023; 7:1072-1078. [PMID: 37264200 DOI: 10.1038/s41559-023-02083-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Accepted: 04/26/2023] [Indexed: 06/03/2023]
Abstract
Climate warming can negatively affect the body size of ectothermic organisms and, based on known temperature-size rules, tends to benefit small-bodied organisms. Our understanding of the interactive effects of climate warming and other environmental factors on the temporal changes of body size structure is limited. We quantified the annual trends in size spectra of 583 stream fish communities sampled for more than 20 years across France. The results show that climate warming steepened the slope of the community size spectrum in streams with limited impacts from other human pressures. These changes were caused by increasing abundance of small-bodied individuals and decreasing abundance of large-bodied individuals. However, opposite effects of climate warming on the size spectrum slopes were observed in streams facing high levels of other human pressures. This demonstrates that the effects of temperature on body size structure can depend on other human pressures, disrupting the natural patterns of size spectra in wild communities with potentially strong implications for the fluxes of energy and nutrients in ecosystems.
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Affiliation(s)
- Ignasi Arranz
- Laboratoire Evolution et Diversité Biologique UMR 5174, Université Toulouse III-Paul Sabatier, CNRS, IRD, Toulouse, France.
| | - Gaël Grenouillet
- Laboratoire Evolution et Diversité Biologique UMR 5174, Université Toulouse III-Paul Sabatier, CNRS, IRD, Toulouse, France
- Institut Universitaire de France, Paris, France
| | - Julien Cucherousset
- Laboratoire Evolution et Diversité Biologique UMR 5174, Université Toulouse III-Paul Sabatier, CNRS, IRD, Toulouse, France
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4
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Arranz I, Grenouillet G, Cucherousset J. Biological invasions and eutrophication reshape the spatial patterns of stream fish size spectra in France. DIVERS DISTRIB 2023. [DOI: 10.1111/ddi.13681] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/07/2023] Open
Affiliation(s)
- Ignasi Arranz
- Laboratoire Evolution et Diversité Biologique (EDB), UMR5174 Université Toulouse 3 Paul Sabatier, CNRS, IRD Toulouse France
| | - Gaël Grenouillet
- Laboratoire Evolution et Diversité Biologique (EDB), UMR5174 Université Toulouse 3 Paul Sabatier, CNRS, IRD Toulouse France
| | - Julien Cucherousset
- Laboratoire Evolution et Diversité Biologique (EDB), UMR5174 Université Toulouse 3 Paul Sabatier, CNRS, IRD Toulouse France
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5
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Su G, Mertel A, Brosse S, Calabrese JM. Species invasiveness and community invasibility of North American freshwater fish fauna revealed via trait-based analysis. Nat Commun 2023; 14:2332. [PMID: 37087448 PMCID: PMC10122662 DOI: 10.1038/s41467-023-38107-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Accepted: 04/14/2023] [Indexed: 04/24/2023] Open
Abstract
While biological invasions are recognized as a major threat to global biodiversity, determining non-native species' abilities to establish in new areas (species invasiveness) and the vulnerability of those areas to invasions (community invasibility) is challenging. Here, we use trait-based analysis to profile invasive species and quantify the community invasibility for >1,800 North American freshwater fish communities. We show that, in addition to effects attributed to propagule pressure caused by human intervention, species with higher fecundity, longer lifespan and larger size tend to be more invasive. Community invasibility peaks when the functional distance among native species was high, leaving unoccupied functional space for the establishment of potential invaders. Our findings illustrate how the functional traits of non-native species determining their invasiveness, and the functional characteristics of the invaded community determining its invasibility, may be identified. Considering those two determinants together will enable better predictions of invasions.
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Affiliation(s)
- Guohuan Su
- Center for Advanced Systems Understanding (CASUS), Helmholtz-Zentrum Dresden-Rossendorf (HZDR), Görlitz, Germany.
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China.
| | - Adam Mertel
- Center for Advanced Systems Understanding (CASUS), Helmholtz-Zentrum Dresden-Rossendorf (HZDR), Görlitz, Germany
| | - Sébastien Brosse
- Laboratoire Evolution et Diversité Biologique (EDB), Université de Toulouse, CNRS, IRD, UPS, Toulouse, France
| | - Justin M Calabrese
- Center for Advanced Systems Understanding (CASUS), Helmholtz-Zentrum Dresden-Rossendorf (HZDR), Görlitz, Germany
- Department of Ecological Modelling, Helmholtz Centre for Environmental Research-UFZ, Leipzig, Germany
- Department of Biology, University of Maryland, College Park, MD, USA
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6
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Lin H, Dai C, Yu H, Tu J, Yu J, He J, Jiang H. Historical connectivity and environmental filtering jointly determine the freshwater fish assemblages on Taiwan and Hainan Islands of China. Curr Zool 2022; 69:12-20. [PMID: 36974143 PMCID: PMC10039183 DOI: 10.1093/cz/zoac015] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Accepted: 02/28/2022] [Indexed: 11/13/2022] Open
Abstract
Abstract
The biotas of Taiwan and Hainan Islands are of continental origin, but the manner with which historical and ecological factors shaped these insular species is still unclear. Here, we used freshwater fish as a model to fill this gap by quantifying the phylogenetic structure of the insular faunas and disentangling the relative contribution of potential drivers. Firstly, we used clustering and ordination analyses to identify regional species pools. To test whether the insular freshwater fish faunas were phylogenetically clustered or overdispersed, we calculated the net relatedness index (NRI) and the nearest taxon index (NTI). Finally, we implemented logistic regressions to disentangle the relative importance of species attributes (i.e. maximum body length, climatic niche dissimilarity, and diversification) and historical connectivity in explaining the insular faunas. Our results showed that the most possible species pools of Taiwan are Zhejiang and Fujian provinces, and those of Hainan are Guangdong and Guangxi provinces. These insular faunas showed random phylogenetic structures in terms of NRI values. According to the NTI values, however, the Taiwanese fauna displayed more phylogenetic clustering, while the Hainanese one was more overdispersed. Both the standard and phylogenetic logistic regressions identified historical connectivity and climatic niche dissimilarity as the two top explanatory variables for species assemblages on these islands. Our reconstruction of the paleo-connected drainage basins provides insight into how historical processes and ecological factors interact to shape the freshwater fish fauna of the East Asian islands.
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Affiliation(s)
- Haoxian Lin
- Spatial Ecology Laboraty, School of Life Sciences, South China Normal University, Guangzhou 510631, China
| | - Chao Dai
- Spatial Ecology Laboraty, School of Life Sciences, South China Normal University, Guangzhou 510631, China
| | - Hongyin Yu
- Spatial Ecology Laboraty, School of Life Sciences, South China Normal University, Guangzhou 510631, China
| | - Jiahao Tu
- Spatial Ecology Laboraty, School of Life Sciences, South China Normal University, Guangzhou 510631, China
| | - Jiehua Yu
- Spatial Ecology Laboraty, School of Life Sciences, South China Normal University, Guangzhou 510631, China
| | - Jiekun He
- Spatial Ecology Laboraty, School of Life Sciences, South China Normal University, Guangzhou 510631, China
| | - Haisheng Jiang
- Spatial Ecology Laboraty, School of Life Sciences, South China Normal University, Guangzhou 510631, China
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7
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Su G, Logez M, Xu J, Tao S, Villéger S, Brosse S. Human impacts on global freshwater fish biodiversity. Science 2021; 371:835-838. [PMID: 33602854 DOI: 10.1126/science.abd3369] [Citation(s) in RCA: 102] [Impact Index Per Article: 34.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2020] [Accepted: 01/14/2021] [Indexed: 01/09/2023]
Abstract
Freshwater fish represent one-fourth of the world's vertebrates and provide irreplaceable goods and services but are increasingly affected by human activities. A new index, Cumulative Change in Biodiversity Facets, revealed marked changes in biodiversity in >50% of the world's rivers covering >40% of the world's continental surface and >37% of the world's river length, whereas <14% of the world's surface and river length remain least impacted. Present-day rivers are more similar to each other and have more fish species with more diverse morphologies and longer evolutionary legacies. In temperate rivers, where the impact has been greatest, biodiversity changes were primarily due to river fragmentation and introduction of non-native species.
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Affiliation(s)
- Guohuan Su
- Laboratoire Evolution et Diversité Biologique (EDB), UMR5174, Université Toulouse 3 Paul Sabatier, CNRS, IRD, Toulouse, France.
| | - Maxime Logez
- INRAE, Aix Marseille Univ, RECOVER, Aix-en-Provence, France.,Pôle R&D "ECLA," Aix-en-Provence, France
| | - Jun Xu
- Donghu Experimental Station of Lake Ecosystems, State Key Laboratory of Freshwater Ecology and Biotechnology of China, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, P.R. China.,Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, P.R. China
| | - Shengli Tao
- Laboratoire Evolution et Diversité Biologique (EDB), UMR5174, Université Toulouse 3 Paul Sabatier, CNRS, IRD, Toulouse, France
| | | | - Sébastien Brosse
- Laboratoire Evolution et Diversité Biologique (EDB), UMR5174, Université Toulouse 3 Paul Sabatier, CNRS, IRD, Toulouse, France
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8
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Pio NL, Carvalho TP. Evidence on the paleodrainage connectivity during Pleistocene: Phylogeography of a hypoptopomatine endemic to southeastern Brazilian coastal drainages. NEOTROPICAL ICHTHYOLOGY 2021. [DOI: 10.1590/1982-0224-2020-0128] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Abstract The coastal basins of southeastern Brazil are influenced by climatic changes that caused sea-level oscillations during the Pleistocene. These marine transgressions and regressions can generate isolation and connection among coastal rivers. In this region, freshwater fishes are excellent models for phylogeographic studies because their distributions may have been affected by geographical and ecological changes resulting from these processes. Therefore, the main objective of this study was to evaluate the effects of Pleistocene sea-level changes on the genetic structure of the loricariid Hisonotus leucofrenatus throughout its area of occurrence. Two genes were sequenced: Cytochrome Oxidase subunit 1 (mitochondrial gene) and rpS7 ribosomal protein gene intron 1 (nuclear gene) from specimens representing 14 river drainages. The genetic data corroborate a divide for freshwater fish by the Serra do Tabuleiro mountain in Santa Catarina State. This divide determines two main genetic groups in H. leucofrenatus: one group to the south and one to the north of this mountain range. The genetic structure observed coincide with the limits of estimated paleodrainage systems for the region, supporting that marine transgressions and regressions during the Pleistocene influenced the biogeographical history of H. leucofrenatus.
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Affiliation(s)
| | - Tiago P. Carvalho
- Universidade Federal do Rio Grande do Sul, Brazil; Pontificia Universidad Javeriana, Colombia
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9
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Liang SH, Walther BA, Shieh BS. Determinants of establishment success: Comparing alien and native freshwater fishes in Taiwan. PLoS One 2020; 15:e0236427. [PMID: 32702074 PMCID: PMC7377439 DOI: 10.1371/journal.pone.0236427] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Accepted: 07/06/2020] [Indexed: 11/19/2022] Open
Abstract
Many parts of Asia, including Taiwan, have suffered severely from freshwater fish invasions. However, few studies using an assemblage approach have been conducted in the region so far that would help to prioritize suitable preventive actions. In this study, we focused on the invasion process from the import stage to the establishment stage, and defined establishment success as the success during this predefined process. We used datasets of freshwater fish assemblages in Taiwan to (1) compare established versus non-established alien species to distinguish the determinants of establishment success, and (2) to use these determinants to test a life history hypothesis which predicts that the magnitudes of the determinants should be significantly different between established alien species and native species. We collated a dataset for freshwater fish species which were imported into Taiwan (n = 118) of which some successfully established (n = 26), and another dataset for freshwater fish species native to Taiwan (n = 77). For each imported species, we collected data for 17 variables, including two phylogenetic, two human-use, two invasion history, and 11 life history variables. We then used decision tree methods, which have advantages in analyzing datasets with many variables of mixed types without the need to make assumptions about data distributions and input data for missing values. Our results showed that aquaculture use and maximum body length were the most important determinants for predicting establishment success of alien freshwater fish in Taiwan. Comparing five important determinants between established alien versus native species showed that the established alien species were significantly more often used in aquaculture, were associated with a higher number of established countries, and had a larger body length and greater highest water temperature tolerance than the native species. We thus conclude that our results provided evidence to support our stated hypothesis. We suggest that aquaculture use, measures of body size, and the number of previously invaded countries may alert researchers and conservation managers to species with a high establishment potential, especially for countries with similar conditions as those in Taiwan.
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Affiliation(s)
- Shih-Hsiung Liang
- Department of Biotechnology, National Kaohsiung Normal University, Kaohsiung, Taiwan
| | - Bruno Andreas Walther
- Department of Biological Sciences, National Sun Yat-sen University, Kaohsiung, Taiwan
| | - Bao-Sen Shieh
- Department of Biomedical Science and Environmental Biology, Kaohsiung Medical University, Kaohsiung, Taiwan
- Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung, Taiwan
- * E-mail:
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10
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Zamorano D, Labra FA, Villarroel M, Lacy S, Mao L, Olivares MA, Peredo-Parada M. Assessing the effect of fish size on species distribution model performance in southern Chilean rivers. PeerJ 2019; 7:e7771. [PMID: 31824752 PMCID: PMC6901005 DOI: 10.7717/peerj.7771] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2018] [Accepted: 08/27/2019] [Indexed: 11/20/2022] Open
Abstract
Despite its theoretical relationship, the effect of body size on the performance of species distribution models (SDM) has only been assessed in a few studies, and to date, the evidence shows unclear results. In this context, Chilean fishes provide an ideal case to evaluate this relationship due to their short size (fishes between 5 cm and 40 cm) and conservation status, providing evidence for species at the lower end of the worldwide fish size distribution and representing a relevant management tool for species conservation. We assessed the effect of body size on the performance of SDM in nine Chilean river fishes, considering the number of records, performance metrics, and predictor importance. The study was developed in the Bueno and Valdivia basins of southern Chile. We used a neural network modeling algorithm, training models with a cross-validation scheme. The effect of fish size on selected metrics was assessed using linear models and beta regressions. While no relationship between fish size and the number of presences was found, our results indicate that the model specificity increases with fish size. Additionally, the predictive importance of Riparian Vegetation and Within-Channel Structures variables decreases for larger species. Our results suggest that the relationship between the grain of the dataset and the home range of the species could bias SDM, leading in our case, to overprediction of absences. We also suggest that evolutionary adaptation to low slopes among Chilean fishes increases the relevance of riparian vegetation in the SDMs of smaller species. This study provides evidence on how species size may bias SDM, which could potentially be corrected by adjusting the model grain.
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Affiliation(s)
- Daniel Zamorano
- Centro de Investigación e Innovación para el Cambio Climático, Facultad de Ciencias, Universidad Santo Tomás, Santiago, Chile
- Plataforma de Investigación en Ecohidrología y Ecohidráulica Limitada, Santiago, Chile
| | - Fabio A. Labra
- Centro de Investigación e Innovación para el Cambio Climático, Facultad de Ciencias, Universidad Santo Tomás, Santiago, Chile
- Programa de Doctorado en Conservación y Gestión de la Biodiversidad, Facultad de Ciencias, Universidad Santo Tomás, Santiago, Chile
| | - Marcelo Villarroel
- Plataforma de Investigación en Ecohidrología y Ecohidráulica Limitada, Santiago, Chile
| | - Shaw Lacy
- The School for Field Studies, Center for Climate Studies, Puerto Natales, Chile
| | - Luca Mao
- Instituto de Geografía, Pontificia Universidad Católica de Chile, Santiago, Chile
- School of Geography, College of Science, University of Lincoln, Lincoln, United Kingdom
| | - Marcelo A. Olivares
- Departamento de Ingeniería Civil, Universidad de Chile, Santiago, Chile
- Centro de Energía, Universidad de Chile, Santiago, Chile
| | - Matías Peredo-Parada
- Plataforma de Investigación en Ecohidrología y Ecohidráulica Limitada, Santiago, Chile
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11
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Bartels PJ, Fontaneto D, Roszkowska M, Nelson DR, Kaczmarek Ł. Latitudinal gradients in body size in marine tardigrades. Zool J Linn Soc 2019. [DOI: 10.1093/zoolinnean/zlz080] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Abstract
Homeotherms and many poikilotherms display a positive relationship between body size and latitude, but this has rarely been investigated in microscopic animals. We analysed all published records of marine Tardigrada to address whether microscopic marine invertebrates have similar ecogeographical patterns to macroscopic animals. The data were analysed using spatially explicit generalized least squares models and linear models. We looked for latitudinal patterns in body size and species richness, testing for sampling bias and phylogenetic constraints. No latitudinal pattern was detected for species richness, and sampling bias was the strongest correlate of species richness. A hump-shaped increase in median body size with latitude was found, and the effect remained significant for the Northern Hemisphere but not for the Southern. The most significant effect supporting the latitudinal gradient was on minimum body size, with smaller species disappearing at higher latitudes. Our results suggest that biogeographical signals were observed for body size, albeit difficult to detect in poorly studied groups because of swamping from biased sampling effort and from low sample size. We did not find a significant correlation with the latitudinal pattern of body size and ecologically relevant net primary productivity.
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Affiliation(s)
- Paul J Bartels
- Department of Biology, Warren Wilson College, Asheville, NC, USA
| | - Diego Fontaneto
- Consiglio Nazionale delle Ricerche, di Ricerca Sulle Acque CNR-IRSA, Verbania Pallanza, Italy
| | - Milena Roszkowska
- Department of Animal Taxonomy and Ecology, Adam Mickiewicz University, Poznan, Poznań, Poland
- Department of Bioenergetics, Adam Mickiewicz University, Poznan, Poznań, Poland
| | - Diane R Nelson
- Department of Biological Sciences, East Tennessee State University, Johnson City, TN, USA
| | - Łukasz Kaczmarek
- Department of Animal Taxonomy and Ecology, Adam Mickiewicz University, Poznan, Poznań, Poland
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12
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Fernández-Torres F, Martínez PA, Olalla-Tárraga MÁ. Shallow water ray-finned marine fishes follow Bergmann’s rule. Basic Appl Ecol 2018. [DOI: 10.1016/j.baae.2018.09.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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13
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Zhao T, Villéger S, Cucherousset J. Accounting for intraspecific diversity when examining relationships between non-native species and functional diversity. Oecologia 2018; 189:171-183. [PMID: 30470889 DOI: 10.1007/s00442-018-4311-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2017] [Accepted: 11/19/2018] [Indexed: 11/29/2022]
Abstract
Quantifying changes in functional diversity, the facet of biodiversity accounting for the biological features of organisms, has been advocated as one of the most integrative ways to unravel how communities are affected by human-induced perturbations. The present study assessed how functional diversity patterns varied among communities that differed in the degree to which non-native species dominated the community in temperate lake fish communities and whether accounting for intraspecific functional variability could provide a better understanding of the variation of functional diversity across communities. Four functional diversity indices were computed for 18 temperate lake fish communities along a gradient of non-native fish dominance using morphological functional traits assessed for each life-stage within each species. First, we showed that intraspecific variability in functional traits was high and comparable to interspecific variability. Second, we found that non-native fish were functionally distinct from native fish. Finally, we demonstrated that there was a significant relationship between functional diversity and the degree to which non-native fish currently dominated the community and that this association could be better detected when accounting for intraspecific functional variability. These findings highlighted the importance of incorporating intraspecific variability to better quantify the variation of functional diversity patterns in communities facing human-induced perturbations.
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Affiliation(s)
- T Zhao
- Laboratoire Evolution et Diversité Biologique (EDB UMR 5174), Université de Toulouse, CNRS, ENFA, UPS, 118 route de Narbonne, 31062, Toulouse, France.
| | - S Villéger
- MARBEC, Univ Montpellier, CNRS, Ifremer, IRD, Montpellier, France
| | - J Cucherousset
- Laboratoire Evolution et Diversité Biologique (EDB UMR 5174), Université de Toulouse, CNRS, ENFA, UPS, 118 route de Narbonne, 31062, Toulouse, France
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14
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Toussaint A, Charpin N, Beauchard O, Grenouillet G, Oberdorff T, Tedesco PA, Brosse S, Villéger S. Non-native species led to marked shifts in functional diversity of the world freshwater fish faunas. Ecol Lett 2018; 21:1649-1659. [DOI: 10.1111/ele.13141] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2018] [Revised: 06/03/2018] [Accepted: 07/24/2018] [Indexed: 11/28/2022]
Affiliation(s)
- Aurèle Toussaint
- Université Paul Sabatier; CNRS; IRD; UMR5174 EDB (Laboratoire Évolution et Diversité Biologique); 118 route de Narbonne F-31062 Toulouse France
- Institute of Ecology and Earth Sciences; Department of Botany; University of Tartu; Lai 40 Tartu 51005 Estonia
| | - Nicolas Charpin
- Université Paul Sabatier; CNRS; IRD; UMR5174 EDB (Laboratoire Évolution et Diversité Biologique); 118 route de Narbonne F-31062 Toulouse France
| | - Olivier Beauchard
- Flanders Marine Institute (VLIZ); Wandelaarkaai 7 8400 Oostende Belgium
- Ecosystem Management Research Group; University of Antwerp; Universiteitsplein 1 2610 Wilrijk Belgium
| | - Gaël Grenouillet
- Université Paul Sabatier; CNRS; IRD; UMR5174 EDB (Laboratoire Évolution et Diversité Biologique); 118 route de Narbonne F-31062 Toulouse France
| | - Thierry Oberdorff
- Université Paul Sabatier; CNRS; IRD; UMR5174 EDB (Laboratoire Évolution et Diversité Biologique); 118 route de Narbonne F-31062 Toulouse France
| | - Pablo A. Tedesco
- Université Paul Sabatier; CNRS; IRD; UMR5174 EDB (Laboratoire Évolution et Diversité Biologique); 118 route de Narbonne F-31062 Toulouse France
| | - Sébastien Brosse
- Université Paul Sabatier; CNRS; IRD; UMR5174 EDB (Laboratoire Évolution et Diversité Biologique); 118 route de Narbonne F-31062 Toulouse France
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15
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Biological invasions undermine the functional diversity of fish community in a large subtropical river. Biol Invasions 2018. [DOI: 10.1007/s10530-018-1751-y] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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16
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Beasley DE, Penick CA, Boateng NS, Menninger HL, Dunn RR. Urbanization disrupts latitude-size rule in 17-year cicadas. Ecol Evol 2018; 8:2534-2541. [PMID: 29531674 PMCID: PMC5838052 DOI: 10.1002/ece3.3879] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2017] [Revised: 12/12/2017] [Accepted: 01/02/2018] [Indexed: 11/25/2022] Open
Abstract
Many ectotherms show a decrease in body size with increasing latitude due to changes in climate, a pattern termed converse Bergmann's rule. Urban conditions-particularly warmer temperatures and fragmented landscapes-may impose stresses on development that could disrupt these body size patterns. To test the impact of urbanization on development and latitudinal trends in body size, we launched a citizen science project to collect periodical cicadas (Magicicada septendecim) from across their latitudinal range during the 2013 emergence of Brood II. Periodical cicadas are long-lived insects whose distribution spans a broad latitudinal range covering both urban and rural habitats. We used a geometric morphometric approach to assess body size and developmental stress based on fluctuating asymmetry in wing shape. Body size of rural cicadas followed converse Bergmann's rule, but this pattern was disrupted in urban habitats. In the north, urban cicadas were larger than their rural counterparts, while southern populations showed little variation in body size between habitats. We detected no evidence of differences in developmental stress due to urbanization. To our knowledge, this is the first evidence that urbanization disrupts biogeographical trends in body size, and this pattern highlights how the effects of urbanization may differ over a species' range.
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Affiliation(s)
- DeAnna E. Beasley
- Department of Biology, Geology, and Environmental ScienceUniversity of Tennessee at ChattanoogaChattanoogaTNUSA
- Department of Applied EcologyNorth Carolina State UniversityRaleighNCUSA
| | - Clint A. Penick
- Department of Applied EcologyNorth Carolina State UniversityRaleighNCUSA
- Keck Center for Behavioral BiologyNorth Carolina State UniversityRaleighNCUSA
- The Biomimicry CenterArizona State UniversityTempeAZUSA
| | - Nana S. Boateng
- Department of Applied EcologyNorth Carolina State UniversityRaleighNCUSA
| | | | - Robert R. Dunn
- Department of Applied EcologyNorth Carolina State UniversityRaleighNCUSA
- Keck Center for Behavioral BiologyNorth Carolina State UniversityRaleighNCUSA
- Center for Macroecology, Evolution and ClimateNatural History Museum of DenmarkUniversity of CopenhagenCopenhagenDenmark
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17
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Radinger J, Essl F, Hölker F, Horký P, Slavík O, Wolter C. The future distribution of river fish: The complex interplay of climate and land use changes, species dispersal and movement barriers. GLOBAL CHANGE BIOLOGY 2017; 23:4970-4986. [PMID: 28500795 DOI: 10.1111/gcb.13760] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2016] [Accepted: 05/05/2017] [Indexed: 06/07/2023]
Abstract
The future distribution of river fishes will be jointly affected by climate and land use changes forcing species to move in space. However, little is known whether fish species will be able to keep pace with predicted climate and land use-driven habitat shifts, in particular in fragmented river networks. In this study, we coupled species distribution models (stepwise boosted regression trees) of 17 fish species with species-specific models of their dispersal (fish dispersal model FIDIMO) in the European River Elbe catchment. We quantified (i) the extent and direction (up- vs. downstream) of predicted habitat shifts under coupled "moderate" and "severe" climate and land use change scenarios for 2050, and (ii) the dispersal abilities of fishes to track predicted habitat shifts while explicitly considering movement barriers (e.g., weirs, dams). Our results revealed median net losses of suitable habitats of 24 and 94 river kilometers per species for the moderate and severe future scenarios, respectively. Predicted habitat gains and losses and the direction of habitat shifts were highly variable among species. Habitat gains were negatively related to fish body size, i.e., suitable habitats were projected to expand for smaller-bodied fishes and to contract for larger-bodied fishes. Moreover, habitats of lowland fish species were predicted to shift downstream, whereas those of headwater species showed upstream shifts. The dispersal model indicated that suitable habitats are likely to shift faster than species might disperse. In particular, smaller-bodied fish (<200 mm) seem most vulnerable and least able to track future environmental change as their habitat shifted most and they are typically weaker dispersers. Furthermore, fishes and particularly larger-bodied species might substantially be restricted by movement barriers to respond to predicted climate and land use changes, while smaller-bodied species are rather restricted by their specific dispersal ability.
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Affiliation(s)
- Johannes Radinger
- Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany
| | - Franz Essl
- Division of Conservation Biology, Vegetation and Landscape Ecology, Department of Botany and Biodiversity Research, University of Vienna, Vienna, Austria
| | - Franz Hölker
- Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany
| | - Pavel Horký
- Department of Zoology and Fisheries, Czech University of Life Sciences Prague, Prague, Czech Republic
| | - Ondřej Slavík
- Department of Zoology and Fisheries, Czech University of Life Sciences Prague, Prague, Czech Republic
| | - Christian Wolter
- Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany
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18
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A global database on freshwater fish species occurrence in drainage basins. Sci Data 2017; 4:170141. [PMID: 28972575 PMCID: PMC5625552 DOI: 10.1038/sdata.2017.141] [Citation(s) in RCA: 62] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2017] [Accepted: 08/01/2017] [Indexed: 11/08/2022] Open
Abstract
A growing interest is devoted to global-scale approaches in ecology and evolution that examine patterns and determinants of species diversity and the threats resulting from global change. These analyses obviously require global datasets of species distribution. Freshwater systems house a disproportionately high fraction of the global fish diversity considering the small proportion of the earth's surface that they occupy, and are one of the most threatened habitats on Earth. Here we provide complete species lists for 3119 drainage basins covering more than 80% of the Earth surface using 14953 fish species inhabiting permanently or occasionally freshwater systems. The database results from an extensive survey of native and non-native freshwater fish species distribution based on 1436 published papers, books, grey literature and web-based sources. Alone or in combination with further datasets on species biological and ecological characteristics and their evolutionary history, this database represents a highly valuable source of information for further studies on freshwater macroecology, macroevolution, biogeography and conservation.
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19
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Nawrot R, Albano PG, Chattopadhyay D, Zuschin M. Climate change and body size shift in Mediterranean bivalve assemblages: unexpected role of biological invasions. Proc Biol Sci 2017; 284:rspb.2017.0357. [PMID: 28768884 DOI: 10.1098/rspb.2017.0357] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2017] [Accepted: 06/23/2017] [Indexed: 11/12/2022] Open
Abstract
Body size is a synthetic functional trait determining many key ecosystem properties. Reduction in average body size has been suggested as one of the universal responses to global warming in aquatic ecosystems. Climate change, however, coincides with human-enhanced dispersal of alien species and can facilitate their establishment. We address effects of species introductions on the size structure of recipient communities using data on Red Sea bivalves entering the Mediterranean Sea through the Suez Canal. We show that the invasion leads to increase in median body size of the Mediterranean assemblage. Alien species are significantly larger than native Mediterranean bivalves, even though they represent a random subset of the Red Sea species with respect to body size. The observed patterns result primarily from the differences in the taxonomic composition and body-size distributions of the source and recipient species pools. In contrast to the expectations based on the general temperature-size relationships in marine ectotherms, continued warming of the Mediterranean Sea indirectly leads to an increase in the proportion of large-bodied species in bivalve assemblages by accelerating the entry and spread of tropical aliens. These results underscore complex interactions between changing climate and species invasions in driving functional shifts in marine ecosystems.
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Affiliation(s)
- Rafał Nawrot
- Department of Palaeontology, University of Vienna, Althanstrasse 14, 1090 Vienna, Austria .,Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA
| | - Paolo G Albano
- Department of Palaeontology, University of Vienna, Althanstrasse 14, 1090 Vienna, Austria
| | - Devapriya Chattopadhyay
- Department of Earth Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur WB-741246, India
| | - Martin Zuschin
- Department of Palaeontology, University of Vienna, Althanstrasse 14, 1090 Vienna, Austria
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20
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Kopf RK, Shaw C, Humphries P. Trait-based prediction of extinction risk of small-bodied freshwater fishes. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2017; 31:581-591. [PMID: 27976421 DOI: 10.1111/cobi.12882] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2016] [Revised: 10/19/2016] [Accepted: 11/02/2016] [Indexed: 06/06/2023]
Abstract
Small body size is generally correlated with r-selected life-history traits, including early maturation, short-generation times, and rapid growth rates, that result in high population turnover and a reduced risk of extinction. Unlike other classes of vertebrates, however, small freshwater fishes appear to have an equal or greater risk of extinction than large fishes. We explored whether particular traits explain the International Union for Conservation of Nature (IUCN) Red List conservation status of small-bodied freshwater fishes from 4 temperate river basins: Murray-Darling, Australia; Danube, Europe; Mississippi-Missouri, North America; and the Rio Grande, North America. Twenty-three ecological and life-history traits were collated for all 171 freshwater fishes of ≤120 mm total length. We used generalized linear mixed-effects models to assess which combination of the 23 traits best explained whether a species was threatened or not threatened. We used the best models to predict the probability of 29 unclassified species being listed as threatened. With and without controlling for phylogeny at the family level, small body size-among small-bodied species-was the most influential trait correlated with threatened species listings. The k-folds cross-validation demonstrated that body size and a random effect structure that included family predicted the threat status with an accuracy of 78% (SE 0.5). We identified 10 species likely to be threatened that are not listed as such on the IUCN Red List. Small body size is not a trait that provides universal resistance to extinction, particularly for vertebrates inhabiting environments affected by extreme habitat loss and fragmentation. We hypothesize that this is because small-bodied species have smaller home ranges, lower dispersal capabilities, and heightened ecological specialization relative to larger vertebrates. Trait data and further model development are needed to predict the IUCN conservation status of the over 11,000 unclassified freshwater fishes, especially those under threat from proposed dam construction in the world's most biodiverse river basins.
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Affiliation(s)
- R Keller Kopf
- Institute for Land Water & Society and School of Environmental Sciences, Charles Sturt University, Albury, New South Wales, 2640, Australia
| | - Casey Shaw
- School of Environmental Sciences, Charles Sturt University, Albury, New South Wales, 2640, Australia
| | - Paul Humphries
- Institute for Land Water & Society and School of Environmental Sciences, Charles Sturt University, Albury, New South Wales, 2640, Australia
- School of Environmental Sciences, Charles Sturt University, Albury, New South Wales, 2640, Australia
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21
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Moore JW, Olden JD. Response diversity, nonnative species, and disassembly rules buffer freshwater ecosystem processes from anthropogenic change. GLOBAL CHANGE BIOLOGY 2017; 23:1871-1880. [PMID: 27761971 DOI: 10.1111/gcb.13536] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2016] [Revised: 08/11/2016] [Accepted: 08/30/2016] [Indexed: 06/06/2023]
Abstract
Integrating knowledge of environmental degradation, biodiversity change, and ecosystem processes across large spatial scales remains a key challenge to illuminating the resilience of earth's systems. There is now a growing realization that the manner in which communities will respond to anthropogenic impacts will ultimately control the ecosystem consequences. Here, we examine the response of freshwater fishes and their nutrient excretion - a key ecosystem process that can control aquatic productivity - to human land development across the contiguous United States. By linking a continental-scale dataset of 533 fish species from 8100 stream locations with species functional traits, nutrient excretion, and land remote sensing, we present four key findings. First, we provide the first geographic footprint of nutrient excretion by freshwater fishes across the United States and reveal distinct local- and continental-scale heterogeneity in community excretion rates. Second, fish species exhibited substantial response diversity in their sensitivity to land development; for native species, the more tolerant species were also the species contributing greater ecosystem function in terms of nutrient excretion. Third, by modeling increased land-use change and resultant shifts in fish community composition, land development is estimated to decrease fish nutrient excretion in the majority (63%) of ecoregions. Fourth, the loss of nutrient excretion would be 28% greater if biodiversity loss was random or 84% greater if there were no nonnative species. Thus, ecosystem processes are sensitive to increased anthropogenic degradation but biotic communities provide multiple pathways for resistance and this resistance varies across space.
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Affiliation(s)
- Jonathan W Moore
- Earth to Ocean Research Group, Simon Fraser University, Burnaby, BC, Canada
| | - Julian D Olden
- School of Aquatic and Fishery Sciences, University of Washington, Seattle, WA, USA
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22
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Dahruddin H, Hutama A, Busson F, Sauri S, Hanner R, Keith P, Hadiaty R, Hubert N. Revisiting the ichthyodiversity of Java and Bali through DNA barcodes: taxonomic coverage, identification accuracy, cryptic diversity and identification of exotic species. Mol Ecol Resour 2017. [DOI: 10.1111/1755-0998.12528%0a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Hadi Dahruddin
- LIPI; Research Center for Biology; Zoology Division; MZB; Gedung Widyasatwaloka; Jl. Raya Jakarta Bogor Km. 46 Cibinong- Bogor 16911 Indonesia
| | - Aditya Hutama
- Faculty of Mathematics and Natural Science; Animal Bioscience; Bogor Agricultural University; Jl. Raya Darmaga Bogor 16680 Indonesia
| | - Frédéric Busson
- Muséum national d'Histoire naturelle; UMR 7208 (MNHN-CNRS-UPMC-IRD-UCBN); CP 026, 43, rue Cuvier Paris Cedex 05 F-75231 France
| | - Sopian Sauri
- LIPI; Research Center for Biology; Zoology Division; MZB; Gedung Widyasatwaloka; Jl. Raya Jakarta Bogor Km. 46 Cibinong- Bogor 16911 Indonesia
| | - Robert Hanner
- Biodiversity Institute of Ontario and Department of Integrative Biology; University of Guelph; Guelph ON Canada
| | - Philippe Keith
- Muséum national d'Histoire naturelle; UMR 7208 (MNHN-CNRS-UPMC-IRD-UCBN); CP 026, 43, rue Cuvier Paris Cedex 05 F-75231 France
| | - Renny Hadiaty
- LIPI; Research Center for Biology; Zoology Division; MZB; Gedung Widyasatwaloka; Jl. Raya Jakarta Bogor Km. 46 Cibinong- Bogor 16911 Indonesia
| | - Nicolas Hubert
- Institut de Recherche pour le Développement; UMR 226 ISEM (UM2-CNRS-IRD); Place Eugène Bataillon CC 065 F-34095 Montpellier cedex 05 France
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23
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Fritschie KJ, Olden JD. Non‐native introductions influence fish body size distributions within a dryland river. Ecosphere 2016. [DOI: 10.1002/ecs2.1615] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Keith J. Fritschie
- School of Aquatic and Fishery Sciences University of Washington Seattle Washington 98105 USA
| | - Julian D. Olden
- School of Aquatic and Fishery Sciences University of Washington Seattle Washington 98105 USA
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24
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Ding C, Jiang X, Xie Z, Brosse S. Seventy-five years of biodiversity decline of fish assemblages in Chinese isolated plateau lakes: widespread introductions and extirpations of narrow endemics lead to regional loss of dissimilarity. DIVERS DISTRIB 2016. [DOI: 10.1111/ddi.12507] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Affiliation(s)
- Chengzhi Ding
- Yunnan Key Laboratory of International Rivers and Transboundary Eco-Security; Yunnan University; Kunming Yunnan 650091 China
| | - Xiaoming Jiang
- State Key Laboratory of Freshwater Ecology and Biotechnology; Institute of Hydrobiology; Chinese Academy of Sciences; Wuhan 430072 China
| | - Zhicai Xie
- State Key Laboratory of Freshwater Ecology and Biotechnology; Institute of Hydrobiology; Chinese Academy of Sciences; Wuhan 430072 China
| | - Sébastien Brosse
- Laboratoire Evolution et Diversite Biologique (UMR5174 UPS-CNRS-ENFA); University Paul Sabatier Toulouse 3; 31062 Toulouse France
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25
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Chang CH, Shao KT, Lin HY, Chiu YC, Lee MY, Liu SH, Lin PL. DNA barcodes of the native ray-finned fishes in Taiwan. Mol Ecol Resour 2016; 17:796-805. [DOI: 10.1111/1755-0998.12601] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2016] [Revised: 09/19/2016] [Accepted: 09/21/2016] [Indexed: 11/30/2022]
Affiliation(s)
- Chia-Hao Chang
- Biodiversity Research Center; Academia Sinica; 128 Academia Road Sec. 2 Nankang Taipei 115 Taiwan
| | - Kwang-Tsao Shao
- Biodiversity Research Center; Academia Sinica; 128 Academia Road Sec. 2 Nankang Taipei 115 Taiwan
| | - Han-Yang Lin
- Biodiversity Research Center; Academia Sinica; 128 Academia Road Sec. 2 Nankang Taipei 115 Taiwan
| | - Yung-Chieh Chiu
- Department of Aquaculture; National Taiwan Ocean University; Keelung Taiwan
| | - Mao-Ying Lee
- Biodiversity Research Center; Academia Sinica; 128 Academia Road Sec. 2 Nankang Taipei 115 Taiwan
| | - Shih-Hui Liu
- Department of Biology; Saint Louis University; 3507 Laclede Avenue, Macelwane Hall St. Louis MO 63103 USA
| | - Pai-Lei Lin
- Biodiversity Research Center; Academia Sinica; 128 Academia Road Sec. 2 Nankang Taipei 115 Taiwan
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26
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Záhorská E. Climate warming and invasive fish species: Will they replace native fish species in waters of temperate zones? Biologia (Bratisl) 2016. [DOI: 10.1515/biolog-2016-0101] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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27
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Dahruddin H, Hutama A, Busson F, Sauri S, Hanner R, Keith P, Hadiaty R, Hubert N. Revisiting the ichthyodiversity of Java and Bali through DNA barcodes: taxonomic coverage, identification accuracy, cryptic diversity and identification of exotic species. Mol Ecol Resour 2016; 17:288-299. [DOI: 10.1111/1755-0998.12528] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2015] [Revised: 10/22/2015] [Accepted: 10/29/2015] [Indexed: 01/31/2023]
Affiliation(s)
- Hadi Dahruddin
- LIPI; Research Center for Biology; Zoology Division; MZB; Gedung Widyasatwaloka; Jl. Raya Jakarta Bogor Km. 46 Cibinong- Bogor 16911 Indonesia
| | - Aditya Hutama
- Faculty of Mathematics and Natural Science; Animal Bioscience; Bogor Agricultural University; Jl. Raya Darmaga Bogor 16680 Indonesia
| | - Frédéric Busson
- Muséum national d'Histoire naturelle; UMR 7208 (MNHN-CNRS-UPMC-IRD-UCBN); CP 026, 43, rue Cuvier Paris Cedex 05 F-75231 France
| | - Sopian Sauri
- LIPI; Research Center for Biology; Zoology Division; MZB; Gedung Widyasatwaloka; Jl. Raya Jakarta Bogor Km. 46 Cibinong- Bogor 16911 Indonesia
| | - Robert Hanner
- Biodiversity Institute of Ontario and Department of Integrative Biology; University of Guelph; Guelph ON Canada
| | - Philippe Keith
- Muséum national d'Histoire naturelle; UMR 7208 (MNHN-CNRS-UPMC-IRD-UCBN); CP 026, 43, rue Cuvier Paris Cedex 05 F-75231 France
| | - Renny Hadiaty
- LIPI; Research Center for Biology; Zoology Division; MZB; Gedung Widyasatwaloka; Jl. Raya Jakarta Bogor Km. 46 Cibinong- Bogor 16911 Indonesia
| | - Nicolas Hubert
- Institut de Recherche pour le Développement; UMR 226 ISEM (UM2-CNRS-IRD); Place Eugène Bataillon CC 065 F-34095 Montpellier cedex 05 France
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28
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Worldwide freshwater fish homogenization is driven by a few widespread non-native species. Biol Invasions 2016. [DOI: 10.1007/s10530-016-1067-8] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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29
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Hubert N, Kadarusman, Wibowo A, Busson F, Caruso D, Sulandari S, Nafiqoh N, Pouyaud L, Rüber L, Avarre JC, Herder F, Hanner R, Keith P, Hadiaty RK. DNA Barcoding Indonesian freshwater fishes: challenges and prospects. ACTA ACUST UNITED AC 2015. [DOI: 10.1515/dna-2015-0018] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
AbstractWith 1172 native species, the Indonesian ichthyofauna is among the world’s most speciose. Despite that the inventory of the Indonesian ichthyofauna started during the eighteen century, the numerous species descriptions during the last decades highlight that the taxonomic knowledge is still fragmentary. Meanwhile, the fast increase of anthropogenic perturbations during the last decades is posing serious threats to Indonesian biodiversity. Indonesia, however, is one of the major sources of export for the international ornamental trade and home of several species of high value in aquaculture. The development of new tools for species identification is urgently needed to improve the sustainability of the exploitation of the Indonesian ichthyofauna. With the aim to build comprehensive DNA barcode libraries, the co-authors have started a collective effort to DNA barcode all Indonesian freshwater fishes. The aims of this review are: (1) to produce an overview of the ichthyological researches conducted so far in Indonesia, (2) to present an updated checklist of the freshwater fishes reported to date from Indonesia’s inland waters, (3) to highlight the challenges associated with its conservation and management, (4) to present the benefits of developing comprehensive DNA barcode reference libraries for the conservation of the Indonesian ichthyofauna.
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30
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Villéger S, Blanchet S, Beauchard O, Oberdorff T, Brosse S. From current distinctiveness to future homogenization of the world's freshwater fish faunas. DIVERS DISTRIB 2014. [DOI: 10.1111/ddi.12242] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Affiliation(s)
- Sébastien Villéger
- Laboratoire Écologie des Systèmes Marins Côtiers (ECOSYM); UMR 5119 CNRS-UM2-IRD-IFREMER-UM1; Place Eugène Bataillon cc 93 Montpellier 34095 France
| | - Simon Blanchet
- Station d'Écologie Expérimentale du CNRS à Moulis; U.S.R 2936 Moulis 09200 France
- CNRS; ENFA; UMR5174 EDB (Laboratoire Évolution et Diversité Biologique); Université Paul Sabatier; 118 route de Narbonne Toulouse F-31062 France
| | - Olivier Beauchard
- Netherlands Institute for Sea Research (NIOZ); P.O. Box 140 Yerseke 4400 AC The Netherlands
| | - Thierry Oberdorff
- UMR “BOREA” (IRD 207, CNRS 7208, MNHN, UPMC); DMPA; Museum National d'Histoire Naturelle; 43 rue Cuvier Paris Cedex 75231 France
| | - Sébastien Brosse
- CNRS; ENFA; UMR5174 EDB (Laboratoire Évolution et Diversité Biologique); Université Paul Sabatier; 118 route de Narbonne Toulouse F-31062 France
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31
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Dias MS, Oberdorff T, Hugueny B, Leprieur F, Jézéquel C, Cornu JF, Brosse S, Grenouillet G, Tedesco PA. Global imprint of historical connectivity on freshwater fish biodiversity. Ecol Lett 2014; 17:1130-40. [PMID: 25039890 DOI: 10.1111/ele.12319] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2014] [Revised: 03/27/2014] [Accepted: 05/28/2014] [Indexed: 11/29/2022]
Abstract
The relative importance of contemporary and historical processes is central for understanding biodiversity patterns. While several studies show that past conditions can partly explain the current biodiversity patterns, the role of history remains elusive. We reconstructed palaeo-drainage basins under lower sea level conditions (Last Glacial Maximum) to test whether the historical connectivity between basins left an imprint on the global patterns of freshwater fish biodiversity. After controlling for contemporary and past environmental conditions, we found that palaeo-connected basins displayed greater species richness but lower levels of endemism and beta diversity than did palaeo-disconnected basins. Palaeo-connected basins exhibited shallower distance decay of compositional similarity, suggesting that palaeo-river connections favoured the exchange of fish species. Finally, we found that a longer period of palaeo-connection resulted in lower levels of beta diversity. These findings reveal the first unambiguous results of the role played by history in explaining the global contemporary patterns of biodiversity.
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Affiliation(s)
- Murilo S Dias
- UMR Biologie des ORganismes et des Ecosystèmes Aquatiques, UMR BOREA, IRD 207-CNRS 7208-UPMC-MNHN, Muséum national d'histoire naturelle, 43 rue Cuvier, FR-75231, Paris cedex, France
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Treasure AM, Chown SL. Antagonistic effects of biological invasion and temperature change on body size of island ectotherms. DIVERS DISTRIB 2013. [DOI: 10.1111/ddi.12153] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Affiliation(s)
- Anne M. Treasure
- Centre for Invasion Biology; Department of Botany and Zoology; Stellenbosch University; Private Bag X1 Matieland 7602 South Africa
- Department of Oceanography; University of Cape Town; Rondebosch 7701 South Africa
| | - Steven L. Chown
- Centre for Invasion Biology; Department of Botany and Zoology; Stellenbosch University; Private Bag X1 Matieland 7602 South Africa
- School of Biological Sciences; Monash University; Victoria 3800 Australia
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Rypel AL. The cold-water connection: Bergmann's rule in North American freshwater fishes. Am Nat 2013; 183:147-56. [PMID: 24334744 DOI: 10.1086/674094] [Citation(s) in RCA: 57] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
Understanding general rules governing macroecological body size variations is one of the oldest pursuits in ecology. However, this science has been dominated by studies of terrestrial vertebrates, spurring debate over the validity of such rules in other taxonomic groups. Here, relationships between maximum body size and latitude, temperature, and elevation were evaluated for 29 North American freshwater fish species. Bergmann's rule (i.e., that body size correlates positively with latitude and negatively with temperature) was observed in 38% of species, converse Bergmann's rule (that body size correlates negatively with latitude and positively with temperature) was observed in 34% of species, and 28% of species showed no macroecological body size relationships. Most notably, every species that expressed Bergmann's rule was a cool- or cold-water species while every species that expressed converse Bergmann's rule was a warm-water species, highlighting how these patterns are likely connected to species thermal niches. This study contradicts previous research suggesting Bergmann's rule does not apply to freshwater fishes, and is congruent with an emerging paradigm of variable macroecological body size patterns in poikilotherms.
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Affiliation(s)
- Andrew L Rypel
- Department of Fish and Wildlife Conservation, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061; and Wisconsin Department of Natural Resources, Bureau of Science Services, Madison, Wisconsin 53716
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Buisson L, Grenouillet G, Villéger S, Canal J, Laffaille P. Toward a loss of functional diversity in stream fish assemblages under climate change. GLOBAL CHANGE BIOLOGY 2013; 19:387-400. [PMID: 23504778 DOI: 10.1111/gcb.12056] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2012] [Revised: 09/21/2012] [Accepted: 09/25/2012] [Indexed: 05/07/2023]
Abstract
The assessment of climate change impacts on biodiversity has so far been biased toward the taxonomic identification of the species likely either to benefit from climate modifications or to experience overall declines. There have still been few studies intended to correlate the characteristics of species to their sensitivity to climate change, even though it is now recognized that functional trait-based approaches are promising tools for addressing challenges related to global changes. In this study, two functional indices (originality and uniqueness) were first measured for 35 fish species occurring in French streams. They were then combined to projections of range shifts in response to climate change derived from species distribution models. We set out to investigate: (1) the relationship between the degrees of originality and uniqueness of fish species, and their projected response to future climate change; and (2) the consequences of individual responses of species for the functional diversity of fish assemblages. After accounting for phylogenetic relatedness among species, we have demonstrated that the two indices used measure two complementary facets of the position of fish species in a functional space. We have also rejected the hypothesis that the most original and/or less redundant species would necessarily experience the greatest declines in habitat suitability as a result of climate change. However, individual species range shifts could lead simultaneously both to a severe decline in the functional diversity of fish assemblages, and to an increase in the functional similarity among assemblages, supporting the hypothesis that disturbance favors communities with combination of common traits and biotic homogenization as well. Our findings therefore emphasize the importance of going beyond the simple taxonomic description of diversity to provide a better assessment of the likely future effects of environmental changes on biodiversity, thus helping to design more effective conservation and management measures.
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Affiliation(s)
- Laëtitia Buisson
- Laboratoire Ecologie Fonctionnelle et Environnement, CNRS, Toulouse, France.
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Vitule JRS, Skóra F, Abilhoa V. Homogenization of freshwater fish faunas after the elimination of a natural barrier by a dam in Neotropics. DIVERS DISTRIB 2011. [DOI: 10.1111/j.1472-4642.2011.00821.x] [Citation(s) in RCA: 123] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Cox CL, Boback SM, Guyer C. Spatial Dynamics of Body Size Frequency Distributions for North American Squamates. Evol Biol 2011. [DOI: 10.1007/s11692-011-9132-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Leprieur F, Tedesco PA, Hugueny B, Beauchard O, Dürr HH, Brosse S, Oberdorff T. Partitioning global patterns of freshwater fish beta diversity reveals contrasting signatures of past climate changes. Ecol Lett 2011; 14:325-34. [PMID: 21303436 DOI: 10.1111/j.1461-0248.2011.01589.x] [Citation(s) in RCA: 108] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
Here, we employ an additive partitioning framework to disentangle the contribution of spatial turnover and nestedness to beta diversity patterns in the global freshwater fish fauna. We find that spatial turnover and nestedness differ geographically in their contribution to freshwater fish beta diversity, a pattern that results from contrasting influences of Quaternary climate changes. Differences in fish faunas characterized by nestedness are greater in drainage basins that experienced larger amplitudes of Quaternary climate oscillations. Conversely, higher levels of spatial turnover are found in historically unglaciated drainage basins with high topographic relief, these having experienced greater Quaternary climate stability. Such an historical climate signature is not clearly detected when considering the overall level of beta diversity. Quantifying the relative roles of historical and ecological factors in explaining present-day patterns of beta diversity hence requires considering the different processes generating these patterns and not solely the overall level of beta diversity.
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Affiliation(s)
- Fabien Leprieur
- UMR 5119 "Ecosystèmes Lagunaires"-CNRS-IFREMER-UM2-IRD, Université Montpellier 2, Place Eugène Bataillon, 34095 Montpellier, France.
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Global and Regional Patterns in Riverine Fish Species Richness: A Review. INTERNATIONAL JOURNAL OF ECOLOGY 2011. [DOI: 10.1155/2011/967631] [Citation(s) in RCA: 82] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
We integrate the respective role of global and regional factors driving riverine fish species richness patterns, to develop a synthetic model of potential mechanisms and processes generating these patterns. This framework allows species richness to be broken down into different components specific to each spatial extent and to establish links between these components and the processes involved. This framework should help to answer the questions that are currently being asked by society, including the effects of species invasions, habitat loss, or fragmentation and climate change on freshwater biodiversity.
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