Microbial digestion in the herbivorous lizardUromastyx aegyptius(Agamidae)

Hotter deserts and the impending challenges for the Spiny-tailed Lizard in India

Ectotherms are particularly vulnerable to climate change, especially those living in extreme areas, such as deserts, where species are already thermally constrained. Using the vulnerable herbivorous lizard Saara hardwickii as a model system, we used a multi-pronged approach to understand the thermal ecology of a desert agamid and potential impacts of rising temperatures. Our data included field-based measures of operative temperatures, body temperatures, and activity, as well as lab-based measures of thermal limits, preferences, and sprint speed. As expected, the temperature dependence of locomotor performance and foraging activity were different, and in the worst-case global warming scenario (SSP5-8.5), potential sprint speed may decrease by up to 14.5% and foraging activity may decrease by up to 43.5% by 2099. Burrows are essential thermal refuges, and global warming projections suggest that S. hardwickii may be restricted to burrows for up to 9 h per day by 2099, which would greatly limit critical activities, like foraging and seeking mating opportunities. Overall, we show that key information on thermal ecology, including temperature-sensitive behaviours in the wild, is necessary to understand the multiple ways in which increasing temperatures may influence ectothermic vertebrates, especially for species like S. hardwickii that are already vulnerable to environmental change.

Captivity and Animal Microbiomes: Potential Roles of Microbiota for Influencing Animal Conservation

During the ongoing biodiversity crisis, captive conservation and breeding programs offer a refuge for species to persist and provide source populations for reintroduction efforts. Unfortunately, captive animals are at a higher disease risk and reintroduction efforts remain largely unsuccessful. One potential factor in these outcomes is the host microbiota which includes a large diversity and abundance of bacteria, fungi, and viruses that play an essential role in host physiology. Relative to wild populations, the generalized pattern of gut and skin microbiomes in captivity are reduced alpha diversity and they exhibit a significant shift in community composition and/or structure which often correlates with various physiological maladies. Many conditions of captivity (antibiotic exposure, altered diet composition, homogenous environment, increased stress, and altered intraspecific interactions) likely lead to changes in the host-associated microbiome. To minimize the problems arising from captivity, efforts can be taken to manipulate microbial diversity and composition to be comparable with wild populations through methods such as increasing dietary diversity, exposure to natural environmental reservoirs, or probiotics. For individuals destined for reintroduction, these strategies can prime the microbiota to buffer against novel pathogens and changes in diet and improve reintroduction success. The microbiome is a critical component of animal physiology and its role in species conservation should be expanded and included in the repertoire of future management practices.

Rapid Dietary Shift in Podarcis siculus Resulted in Localized Changes in Gut Function

AbstractNatural dietary shifts offer the opportunity to address the nutritional physiological characters required to thrive on a particular diet. Here, we studied the nutritional physiology of Podarcis siculus, with populations on Pod Mrčaru, Croatia, that have become omnivorous and morphologically distinct (including the development of valves in the hindgut) from their insectivorous source population on Pod Kopište. We compared gut structure and function between the two island populations of this lizard species and contrasted them with an insectivorous mainland out-group population in Zagreb. On the basis of the adaptive modulation hypothesis, we predicted changes in gut size and structure, digestive enzyme activities, microbial fermentation products (short-chain fatty acids [SCFAs]), and plant material digestibility concomitant with this dietary change. The Pod Mrčaru population had heavier guts than the mainland population, but there were no other differences in gut structure. Most of the enzymatic differences we detected were between the island populations and the out-group population. The Pod Mrčaru lizards had higher amylase and trehalase activities in their hindguts compared with the Pod Kopište population, and the Pod Kopište lizards had greater SCFA concentrations in their hindguts than the omnivorous Pod Mrčaru population. Interestingly, the differences between the Pod Mrčaru and Pod Kopište populations are primarily localized to the hindgut and are likely influenced by microbial communities and a higher food intake by the Pod Mrčaru lizards. Although subtle, the changes in hindgut digestive physiology impact the digestibility of plant material in adult lizards-Pod Mrčaru lizards had higher digestibility of herbivorous and omnivorous diets fed over several weeks in the laboratory than did their source population.

Inter-population and seasonal changes in food habits of the Moroccan Spiny-tailed lizard along an aridity gradient

Food habits of the Moroccan Spiny-tailed lizard, Uromastyx nigriventris, from three localities along an aridity gradient from north-east (Mediterranean) to southwest (Atlantic pre-Saharan) of the Atlas range, Morocco, were investigated in spring and autumn 2015 using fecal microhistological analysis. The obtained results showed that these lizards are predominantly herbivorous feeding on 4 to 13 different plant species depending on locality and season, but some insects, namely coleopterans and ants (Formicidae) (up to 6%) are also consumed. They heavily ingested annual and perennial herbaceous plants through a single season. There were significant differences among seasons and localities in terms of species richness and Shannon-Wiener diversity indexes. These indexes increased significantly, respectively for the spring and autumnal diets, and correlatively with the species richness in the habitat along the aridity gradient. The Stress-Gradient Hypothesis could explain this increase. According to Pianka’s niche overlap index (), dietary overlap was low between Saka (the least arid locality) and Skoura (the intermediate locality) in spring. Conversely, there was a substantial overlap in the diets in autumn with a more pronounced similarity between Saka and Skoura. A review of published information on food habits among Spiny-tailed lizard species and populations was established.

The relationship between diet and tooth complexity in living dentigerous saurians

Living saurian reptiles exhibit a wide range of diets, from carnivores to strict herbivores. Previous research suggests that the tooth shape in some lizard clades correlates with diet, but this has not been tested using quantitative methods. I investigated the relationship between phenotypic tooth complexity and diet in living reptiles by examining the entire dentary tooth row in over 80 specimens comprising all major dentigerous saurian clades. I quantified dental complexity using orientation patch count rotated (OPCR), which discriminates diet in living and extinct mammals, where OPCR-values increase with the proportion of dietary plant matter. OPCR was calculated from high-resolution CT-scans, and I standardized OPCR-values by the total number of teeth to account for differences in tooth count across taxa. In contrast with extant mammals, there appears to be greater overlap in tooth complexity values across dietary groups because multicusped teeth characterize herbivores, omnivores, and insectivores, and because herbivorous skinks have relatively simple teeth. In particular, insectivorous lizards have dental complexities that are very similar to omnivores. Regardless, OPCR-values for animals that consume significant amounts of plant material are higher than those of carnivores, with herbivores having the highest average dental complexity. These results suggest reptilian tooth complexity is related to diet, similar to extinct and extant mammals, although phylogenetic history also plays a measurable role in dental complexity. This has implications for extinct amniotes that display a dramatic range of tooth morphologies, many with no modern analogs, which inhibits detailed dietary reconstructions. These data demonstrate that OPCR, when combined with additional morphological data, has the potential to be used to reconstruct the diet of extinct amniotes. J. Morphol. 278:500-522, 2017. © 2017 Wiley Periodicals, Inc.

Paracellular absorption is relatively low in the herbivorous Egyptian spiny-tailed lizard, Uromastyx aegyptia

Absorption of small water-soluble nutrients in vertebrate intestines occurs both by specific, mediated transport and by non-specific, passive, paracellular transport. Although it is apparent that paracellular absorption represents a significant route for nutrient absorption in many birds and mammals, especially small, flying species, its importance in ectothermic vertebrates has not previously been explored. Therefore, we measured fractional absorption (ƒ) and absorption rate of three paracellular probes (arabinose, L-rhamnose, cellobiose) and of 3-O-methyl D-glucose (absorbed by both mediated and paracellular pathways) by the large herbivorous lizard, Uromastyx aegyptia, to explore the relative importance of paracellular and mediated transport in an ectothermic, terrestrial vertebrate. Fractional absorption of 3-O-methyl D-glucose was high (ƒ = 0.73±0.04) and similar to other vertebrates; ƒ of the paracellular probes was relatively low (arabinose ƒ = 0.31±0.03, L-rhamnose ƒ = 0.19±0.02, and cellobiose ƒ = 0.14±0.02), and decreased with molecular mass, a pattern consistent with other vertebrates. Paracellular absorption accounted for approximately 24% of total 3-O-methyl D-glucose uptake, indicating low reliance on this pathway for these herbivorous lizards, a pattern similar to that found in other terrestrial vertebrates, and different from small flying endotherms (both birds and bats).

Methane output of tortoises: its contribution to energy loss related to herbivore body mass

An increase in body mass (M) is traditionally considered advantageous for herbivores in terms of digestive efficiency. However, recently increasing methane losses with increasing M were described in mammals. To test this pattern in non-mammal herbivores, we conducted feeding trails with 24 tortoises of various species (M range 0.52–180 kg) fed a diet of grass hay ad libitum and salad. Mean daily dry matter and gross energy intake measured over 30 consecutive days scaled to M^{0.75 (95%CI 0.64–0.87)} and M^{0.77 (95%CI 0.66–0.88)}, respectively. Methane production was measured over two consecutive days in respiration chambers and scaled to M^{1.03 (95%CI 0.84–1.22)}. When expressed as energy loss per gross energy intake, methane losses scaled to 0.70 (95%CI 0.47–1.05) M^{0.29 (95%CI 0.14–0.45)}. This scaling overlaps in its confidence intervals to that calculated for nonruminant mammals 0.79 (95%CI 0.63–0.99) M^{0.15 (95%CI 0.09–0.20)}, but is lower than that for ruminants. The similarity between nonruminant mammals and tortoises suggest a common evolution of the gut fauna in ectotherms and endotherms, and that the increase in energetic losses due to methane production with increasing body mass is a general allometric principle in herbivores. These findings add evidence to the view that large body size itself does not necessarily convey a digestive advantage.

To chew or not to chew: fecal particle size in herbivorous reptiles and mammals

A major difference between reptile and mammalian herbivores is that the former do not masticate their food. Actually, food particle size reduction by chewing is usually considered one of the adaptations facilitating the higher metabolic rates of mammals. However, quantitative comparisons of ingesta particle size between the clades have, to our knowledge, not been performed so far. We measured mean fecal particle size (MPS) in 79 captive individuals of 14 reptile herbivore species (tortoises, lizards, and Corucia zebrata) by wet sieving and compared the results with a mammalian dataset. MPS increased with body mass in both clades, but at a significantly higher level in reptiles. Limited evidence in free-ranging and captive individuals of Testudo hermanni indicates that in reptiles, the ability to crop food and food particle size significantly influence fecal particle size. The opportunistic observation of a drastic particle size difference between stomach and intestinal contents corroborates findings that in reptiles, in contrast to terrestrial mammals, significant ingesta particle size reduction does occur in the gastrointestinal tract, most likely owing to microbial action during very long ingesta retention. Whether behavioral adaptations to controlling ingesta particle size, such as deliberate small bite sizes, are adaptive strategies in reptiles remains to be investigated.

Allometry of visceral organs in living amniotes and its implications for sauropod dinosaurs

Allometric equations are often used to extrapolate traits in animals for which only body mass estimates are known, such as dinosaurs. One important decision can be whether these equations should be based on mammal, bird or reptile data. To address whether this choice will have a relevant influence on reconstructions, we compared allometric equations for birds and mammals from the literature to those for reptiles derived from both published and hitherto unpublished data. Organs studied included the heart, kidneys, liver and gut, as well as gut contents. While the available data indicate that gut content mass does not differ between the clades, the organ masses for reptiles are generally lower than those for mammals and birds. In particular, gut tissue mass is significantly lower in reptiles. When applying the results in the reconstruction of a sauropod dinosaur, the estimated volume of the coelomic cavity greatly exceeds the estimated volume of the combined organ masses, irrespective of the allometric equation used. Therefore, substantial deviation of sauropod organ allometry from that of the extant vertebrates can be allowed conceptually. Extrapolations of retention times from estimated gut contents mass and food intake do not suggest digestive constraints on sauropod dinosaur body size.

Symbiotic fermentation, digesta passage, and gastrointestinal morphology in bullfrog tadpoles (Rana catesbeiana)

Relative to other herbivorous vertebrates, the nutritional ecology and digestive physiology of anuran larvae remain poorly understood. Our objective was to compare gut structure and inhabitants, digesta passage, and microbial fermentation in bullfrog tadpoles (Rana catesbeiana) to those in other herbivores. Bullfrog tadpole gastrointestinal tracts were long and voluminous, with an enlarged colon that harbored a diverse symbiotic community. The transit time for particulate markers passing through bullfrog tadpoles was 6 h, the median retention time was 8-10 h, and gut clearance was 10-14 h postingestion. Relatively high levels of short-chain fatty acids in the hindgut of tadpoles indicated active microbial fermentation in this gut region. This report represents the first account of gastrointestinal fermentation in the class Amphibia. On the basis of in vitro fermentation assays, we estimated that microbial fermentation in the hindgut provides 20% of the total daily energy requirement of bullfrog tadpoles. These tadpoles also exhibited coprophagy, a practice that provides important nutritive gains in other herbivores. The physiological and behavioral characteristics of these tadpoles are remarkably similar to those of other small-bodied, hindgut-fermenting vertebrates, suggesting convergent digestive strategies among a broad range of herbivorous taxa.

Omnivory in lacertid lizards: adaptive evolution or constraint?

Feeding specializations such as herbivory are an often cited example of convergent and adaptive evolution. However, some groups such as lizards appear constrained in the evolution of morphological specializations associated with specialized diets. Here we examine whether the inclusion of plant matter into the diet of omnivorous lacertid lizards has resulted in morphological specializations and whether these specializations reflect biomechanical compromises as expected if omnivores are constrained by functional trade-offs. We examined external head shape, skull shape, tooth structure, intestinal tract length and bite performance as previous studies have suggested correlations between the inclusion of plants into the diet and these traits. Our data show that omnivorous lacertid lizards possess modifications of these traits that allow them to successfully exploit plant material as a food source. Conversely, few indications of a compromise phenotype could be detected, suggesting that the evolution towards herbivory is only mildly constrained by functional trade-offs.

Biochemical and Microbiological Evidence for Fermentative Digestion in Free‐Living Land Iguanas (Conolophus pallidus) and Marine Iguanas (Amblyrhynchus cristatus) on the Galápagos Archipelago

Herbivorous lizards are potentially capable of high digestive efficiency, but the presence of an indigenous microbial population has been implied from measurements of activity rather than directly studied. This study is the first to provide direct biochemical and microbiological evidence for fermentative digestion in free-living land iguanas (Conolophus pallidus) and marine iguanas (Amblyrhynchus cristatus) from the Galapagos archipelago. In marine iguanas, the stomach and large capacious colon contained ca. 32% and 60%, respectively, of the weight of total gut content. Total volatile fatty acid concentration was ca. 150 and 180 mM, respectively, for marine and land iguanas. Molar proportions of acetate, propionate, and butyrate (80.3%, 9.5%, and 3.5%) in land iguana fecal samples were similar to those for marine iguanas. Examination of fecal samples using confocal and transmission electron microscopy, as well as cultivable counts, revealed a dense and diverse population of bacteria, with spores prominent. Total culturable counts of anaerobes (2.22x10(8) g(-1) wet weight of fecal material) outnumbered aerobes on average by a factor of ca. 700. Combined, these results strongly support the contention that these unique herbivorous lizards are largely dependent on the presence and metabolic activities of a resident bacterial population in order to hydrolyze and ferment plant polymers that are indigestible to the host.

Hindgut fermentation in three species of marine herbivorous fish

Symbioses with gut microorganisms provides a means by which terrestrial herbivores are able to obtain energy. These microorganisms ferment cell wall materials of plants to short-chain fatty acids (SCFA), which are then absorbed and used by the host animal. Many marine herbivorous fishes contain SCFA (predominantly acetate) in their hindgut, indicative of gut microbial activity, but rates of SCFA production have not been measured. Such information is an important prerequisite to understanding the contribution that gut microorganisms make in satisfying the energy needs of the fish. We have estimated the rates of acetate production in the gut of three species of temperate marine herbivorous fish from northeastern New Zealand: Kyphosus sydneyanus (family Kyphosidae), Odax pullus (family Odacidae), and Aplodactylus arctidens (family Aplodactylidae). Ex vivo preparations of freshly caught fish were maintained with their respiratory and circulatory systems intact, radiolabeled acetate was injected into ligated hindgut sections, and gut fluid was sampled at 20-min intervals for 2 h. Ranges for acetate turnover in the hindguts of the studied species were determined from the slope of plots as the log of the specific radioactivity of acetate versus time and pool size, expressed on a nanomole per milliliter per minute basis. Values were 450 to 570 (K. sydneyanus), 373 to 551 (O. pullus), and 130 to 312 (A. arctidens). These rates are comparable to those found in the guts of herbivorous reptiles and mammals. To determine the contribution of metabolic pathways to the fate of acetate, rates of sulfate reduction and methanogenesis were measured in the fore-, mid-, and hindgut sections of the three fish species. Both rates increased from the distal to proximal end of the hindgut, where sulfate reduction accounted for only a small proportion (<5%) of acetate methyl group transformed to CO(2), and exceeded methanogenesis from acetate by >50-fold. When gut size was taken into account, acetate uptake from the hindgut of the fish species, determined on a millimole per day per kilogram of body weight basis, was 70 (K. sydneyanus), 18 (O. pullus), and 10 (A. arctidens).

Dietary fiber influences nutrient utilization, growth and dry matter intake of green iguanas (Iguana iguana)

Herbivory is an uncommon feeding strategy in lizards. Appropriate diet formulations for captive lizards should be based on performance measures, yet few data are available on the effect of plant fiber on food intake, nutrient utilization and growth of captive herbivorous lizards. This study was conducted to determine the effect of three levels of dietary fiber on dry matter intake, nutrient and energy metabolizability and growth rate of the green iguana (Iguana iguana). Twenty-one captive iguanas were fed nutritionally complete diets containing three levels of dietary fiber: 19, 24, and 27% neutral detergent fiber. The iguanas were fed each diet for at least 12 wk, and total excreta were collected for 11.3 +/- 4.0 d (means +/- , range of 7 to 25 d). Diets and excreta were analyzed for dry matter, organic matter, gross energy, neutral detergent fiber, acid detergent fiber, and acid detergent lignin. The study was designed as a Latin square crossover. Across all diets, dry matter intake was proportional to body mass1.0 (BM). Growth rate was greater (P < 0. 05) when iguanas were fed the low and medium fiber diets (2.2 and 2. 4 g/d, respectively) than when fed the high fiber diet (1.4 g/d). However, mean daily dry matter intake of the three diets [7.2 g/(d. kg BM)] was not different. In general, digestibility of fiber fractions and the metabolizability of dietary energy decreased (P < 0.05) as the level of dietary fiber increased. These data suggest that a diet containing less than 27% neutral detergent fiber should be fed if rapid growth is to be sustained during intensive captive production of green iguanas.