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Fu X, Walker BJ. Photorespiratory glycine contributes to photosynthetic induction during low to high light transition. Sci Rep 2024; 14:19365. [PMID: 39169106 PMCID: PMC11339310 DOI: 10.1038/s41598-024-70201-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Accepted: 08/13/2024] [Indexed: 08/23/2024] Open
Abstract
Leaves experience near-constant light fluctuations daily. Past studies have identified many limiting factors of slow photosynthetic induction when leaves transition from low light to high light. However, the contribution of photorespiration in influencing photosynthesis during transient light conditions is largely unknown. This study employs dynamic measurements of gas exchange and metabolic responses to examine the contribution of photorespiration in constraining net rates of carbon assimilation during light induction. This work indicates that photorespiratory glycine accumulation during the early light induction contributes 5-7% to the additional carbon fixed relative to the low light conditions. Mutants with large glycine pools under photorespiratory conditions (5-formyl THF cycloligase and hydroxypyruvate reductase 1) showed a transient spike in net CO2 assimilation during light induction, with glycine buildup accounting for 22-36% of the extra carbon assimilated. Interestingly, levels of many C3 cycle intermediates remained relatively constant in both mutants and wild-type throughout the light induction period where glycine accumulated, indicating that recycling of carbon into the C3 cycle via photorespiration is not needed to maintain C3 cycle activity under transient conditions. Furthermore, our data show that oxygen transient experiments can be used as a proxy to identify the photorespiratory component of light-induced photosynthetic changes.
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Affiliation(s)
- Xinyu Fu
- Department of Energy, Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA
| | - Berkley J Walker
- Department of Energy, Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA.
- Department of Plant Biology, Michigan State University, East Lansing, MI, 48824, USA.
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2
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Xie G, Zou X, Liang Z, Zhang K, Wu D, Jin H, Wang H, Shen Q. GBF family member PfGBF3 and NAC family member PfNAC2 regulate rosmarinic acid biosynthesis under high light. PLANT PHYSIOLOGY 2024; 195:1728-1744. [PMID: 38441888 DOI: 10.1093/plphys/kiae036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 12/12/2023] [Indexed: 06/02/2024]
Abstract
Rosmarinic acid (RA) is an important medicinal metabolite and a potent food antioxidant. We discovered that exposure to high light intensifies the accumulation of RA in the leaves of perilla (Perilla frutescens (L.) Britt). However, the molecular mechanism underlying RA synthesis in response to high light stress remains poorly understood. To address this knowledge gap, we conducted a comprehensive analysis employing transcriptomic sequencing, transcriptional activation, and genetic transformation techniques. High light treatment for 1 and 48 h resulted in the upregulation of 592 and 1,060 genes, respectively. Among these genes, three structural genes and 93 transcription factors exhibited co-expression. Notably, NAC family member PfNAC2, GBF family member PfGBF3, and cinnamate-4-hydroxylase gene PfC4H demonstrated significant co-expression and upregulation under high light stress. Transcriptional activation analysis revealed that PfGBF3 binds to and activates the PfNAC2 promoter. Additionally, both PfNAC2 and PfGBF3 bind to the PfC4H promoter, thereby positively regulating PfC4H expression. Transient overexpression of PfNAC2, PfGBF3, and PfC4H, as well as stable transgenic expression of PfNAC2, led to a substantial increase in RA accumulation in perilla. Consequently, PfGBF3 acts as a photosensitive factor that positively regulates PfNAC2 and PfC4H, while PfNAC2 also regulates PfC4H to promote RA accumulation under high light stress. The elucidation of the regulatory mechanism governing RA accumulation in perilla under high light conditions provides a foundation for developing a high-yield RA system and a model to understand light-induced metabolic accumulation.
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Affiliation(s)
- Guanwen Xie
- School of Pharmaceutical Sciences, Institute of Medical Plant Physiology and Ecology, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
| | - Xiuzai Zou
- School of Pharmaceutical Sciences, Institute of Medical Plant Physiology and Ecology, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
| | - Zishan Liang
- School of Pharmaceutical Sciences, Institute of Medical Plant Physiology and Ecology, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
| | - Ke Zhang
- School of Pharmaceutical Sciences, Institute of Medical Plant Physiology and Ecology, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
| | - Duan Wu
- School of Pharmaceutical Sciences, Institute of Medical Plant Physiology and Ecology, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
| | - Honglei Jin
- School of Pharmaceutical Sciences, Institute of Medical Plant Physiology and Ecology, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
| | - Hongbin Wang
- School of Pharmaceutical Sciences, Institute of Medical Plant Physiology and Ecology, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
| | - Qi Shen
- School of Pharmaceutical Sciences, Institute of Medical Plant Physiology and Ecology, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
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Fan Y, Tcherkez G, Scafaro AP, Taylor NL, Furbank RT, von Caemmerer S, Atkin OK. Variation in leaf dark respiration among C3 and C4 grasses is associated with use of different substrates. PLANT PHYSIOLOGY 2024; 195:1475-1490. [PMID: 38324704 PMCID: PMC11142371 DOI: 10.1093/plphys/kiae064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Revised: 12/04/2023] [Accepted: 01/11/2024] [Indexed: 02/09/2024]
Abstract
Measurements of respiratory properties have often been made at a single time point either during daytime using dark-adapted leaves or during nighttime. The influence of the day-night cycle on respiratory metabolism has received less attention but is crucial to understand photosynthesis and photorespiration. Here, we examined how CO2- and O2-based rates of leaf dark respiration (Rdark) differed between midday (after 30-min dark adaptation) and midnight in 8 C3 and C4 grasses. We used these data to calculate the respiratory quotient (RQ; ratio of CO2 release to O2 uptake), and assessed relationships between Rdark and leaf metabolome. Rdark was higher at midday than midnight, especially in C4 species. The day-night difference in Rdark was more evident when expressed on a CO2 than O2 basis, with the RQ being higher at midday than midnight in all species, except in rice (Oryza sativa). Metabolomic analyses showed little correlation of Rdark or RQ with leaf carbohydrates (sucrose, glucose, fructose, or starch) but strong multivariate relationships with other metabolites. The results suggest that rates of Rdark and differences in RQ were determined by several concurrent CO2-producing and O2-consuming metabolic pathways, not only the tricarboxylic acid cycle (organic acids utilization) but also the pentose phosphate pathway, galactose metabolism, and secondary metabolism. As such, Rdark was time-, type- (C3/C4) and species-dependent, due to the use of different substrates.
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Affiliation(s)
- Yuzhen Fan
- ARC Centre of Excellence in Plant Energy Biology, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
- Division of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
| | - Guillaume Tcherkez
- Division of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
- Institut de Recherche en Horticulture et Semences, INRAe, Université d'Angers, Beaucouzé 49100, France
| | - Andrew P Scafaro
- ARC Centre of Excellence in Plant Energy Biology, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
- Division of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
| | - Nicolas L Taylor
- School of Molecular Sciences and Institute of Agriculture, The University of Western Australia, Crawley, WA 6009, Australia
| | - Robert T Furbank
- Division of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
- ARC Centre of Excellence for Translational Photosynthesis, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
| | - Susanne von Caemmerer
- Division of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
- ARC Centre of Excellence for Translational Photosynthesis, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
| | - Owen K Atkin
- ARC Centre of Excellence in Plant Energy Biology, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
- Division of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
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4
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Shor E, Ravid J, Sharon E, Skaliter O, Masci T, Vainstein A. SCARECROW-like GRAS protein PES positively regulates petunia floral scent production. PLANT PHYSIOLOGY 2023; 192:409-425. [PMID: 36760164 PMCID: PMC10152688 DOI: 10.1093/plphys/kiad081] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Revised: 01/17/2023] [Accepted: 01/20/2023] [Indexed: 05/03/2023]
Abstract
Emission of scent volatiles by flowers is important for successful pollination and consequently, reproduction. Petunia (Petunia hybrida) floral scent is formed mainly by volatile products of the phenylpropanoid pathway. We identified and characterized a regulator of petunia scent production: the GRAS protein PHENYLPROPANOID EMISSION-REGULATING SCARECROW-LIKE (PES). Its expression increased in petals during bud development and was highest in open flowers. Overexpression of PES increased the production of floral volatiles, while its suppression resulted in scent reduction. We showed that PES upregulates the expression of genes encoding enzymes of the phenylpropanoid and shikimate pathways in petals, and of the core regulator of volatile biosynthesis ODORANT1 by activating its promoter. PES is an ortholog of Arabidopsis (Arabidopsis thaliana) PHYTOCHROME A SIGNAL TRANSDUCTION 1, involved in physiological responses to far-red (FR) light. Analyses of the effect of nonphotosynthetic irradiation (low-intensity FR light) on petunia floral volatiles revealed FR light as a scent-activating factor. While PHYTOCHROME A regulated scent-related gene expression and floral scent production under FR light, the influence of PES on volatile production was not limited by FR light conditions.
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Affiliation(s)
- Ekaterina Shor
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 76100, Israel
| | - Jasmin Ravid
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 76100, Israel
| | - Elad Sharon
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 76100, Israel
| | - Oded Skaliter
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 76100, Israel
| | - Tania Masci
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 76100, Israel
| | - Alexander Vainstein
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 76100, Israel
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5
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Fu X, Walker BJ. Dynamic response of photorespiration in fluctuating light environments. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:600-611. [PMID: 35962786 DOI: 10.1093/jxb/erac335] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Accepted: 08/09/2022] [Indexed: 06/15/2023]
Abstract
Photorespiration is a dynamic process that is intimately linked to photosynthetic carbon assimilation. There is a growing interest in understanding carbon assimilation during dynamic conditions, but the role of photorespiration under such conditions is unclear. In this review, we discuss recent work relevant to the function of photorespiration under dynamic conditions, with a special focus on light transients. This work reveals that photorespiration is a fundamental component of the light induction of assimilation where variable diffusive processes limit CO2 exchange with the atmosphere. Additionally, metabolic interactions between photorespiration and the C3 cycle may help balance fluxes under dynamic light conditions. We further discuss how the energy demands of photorespiration present special challenges to energy balancing during dynamic conditions. We finish the review with an overview of why regulation of photorespiration may be important under dynamic conditions to maintain appropriate fluxes through metabolic pathways related to photorespiration such as nitrogen and one-carbon metabolism.
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Affiliation(s)
- Xinyu Fu
- Department of Energy-Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA
| | - Berkley J Walker
- Department of Energy-Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA
- Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA
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6
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Chadee A, Mohammad M, Vanlerberghe GC. Evidence that mitochondrial alternative oxidase respiration supports carbon balance in source leaves of Nicotiana tabacum. JOURNAL OF PLANT PHYSIOLOGY 2022; 279:153840. [PMID: 36265227 DOI: 10.1016/j.jplph.2022.153840] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Revised: 10/07/2022] [Accepted: 10/07/2022] [Indexed: 06/16/2023]
Abstract
Alternative oxidase (AOX) represents a non-energy conserving pathway within the mitochondrial electron transport chain. One potential physiological role of AOX could be to manage leaf carbohydrate amounts by supporting respiratory carbon oxidation reactions. In this study, several approaches tested the hypothesis that AOX1a gene expression in Nicotiana tabacum leaf is enhanced in conditions expected to promote an increased leaf carbohydrate status. These approaches included supplying leaves with exogenous carbohydrates, comparing plants grown at different atmospheric CO2 concentrations, comparing sink leaves with source leaves, comparing plants with different ratios of source to sink activity, and examining gene expression over the diel cycle. In each case, the pattern of AOX1a gene expression was compared with that of other genes known to respond to carbohydrates and/or other factors related to source:sink activity. These included GPT1 and GPT3 (that encode chloroplast glucose 6-phosphate/phosphate translocators), SPS (that encodes sucrose phosphate synthase), SUT1 (that encodes a sucrose/H+ symporter involved in phloem loading) and UCP1 (that encodes a mitochondrial uncoupling protein). The AOX1a transcript amount was higher following the leaf sink-to-source transition, and in plants with higher source relative to sink activity due to increasing plant age. Further, these effects were amplified in plants grown at elevated CO2 to stimulate source activity, particularly at end-of-day time periods. The AOX1a transcript amount was also higher following treatment of leaves with carbohydrate, in particular sucrose. Overall, the results provide evidence that, while source leaf sucrose accumulation may signal for a down-regulation of sucrose synthesis and transport, it also signals for means to manage the excess cytosolic carbohydrate pools. This includes increased AOX respiration to support carbon oxidation pathways even if energy charge is high, in combination perhaps with some return flux of carbohydrate from cytosol to stroma through the GPT3 translocator. As discussed, these activities could contribute to maintaining plant source:sink balance, as well as photosynthetic and phloem loading capacity.
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Affiliation(s)
- Avesh Chadee
- Department of Biological Sciences, And Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario, M1C1A4, Canada
| | - Masoom Mohammad
- Department of Biological Sciences, And Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario, M1C1A4, Canada
| | - Greg C Vanlerberghe
- Department of Biological Sciences, And Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario, M1C1A4, Canada.
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7
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Faber AH, Griffin KL, Tjoelker MG, Pagter M, Yang J, Bruhn D. Consistent diurnal pattern of leaf respiration in the light among contrasting species and climates. THE NEW PHYTOLOGIST 2022; 236:71-85. [PMID: 35727175 PMCID: PMC9544685 DOI: 10.1111/nph.18330] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Accepted: 06/12/2022] [Indexed: 05/02/2023]
Abstract
Leaf daytime respiration (leaf respiration in the light, RL ) is often assumed to constitute a fixed fraction of leaf dark respiration (RD ) (i.e. a fixed light inhibition of respiration (RD )) and vary diurnally due to temperature fluctuations. These assumptions were tested by measuring RL , RD and the light inhibition of RD in the field at a constant temperature using the Kok method. Measurements were conducted diurnally on 21 different species: 13 deciduous, four evergreen and four herbaceous from humid continental and humid subtropical climates. RL and RD showed significant diurnal variations and the diurnal pattern differed in trajectory and magnitude between climates, but not between plant functional types (PFTs). The light inhibition of RD varied diurnally and differed between climates and in trajectory between PFTs. The results highlight the entrainment of leaf daytime respiration to the diurnal cycle and that time of day should be accounted for in studies seeking to examine the environmental and biological drivers of leaf daytime respiration.
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Affiliation(s)
- Andreas H. Faber
- Department of Chemistry and BioscienceAalborg UniversityFredrik Bajers Vej 7H9220AalborgDenmark
| | - Kevin L. Griffin
- Department of Earth and Environmental SciencesColumbia UniversityPalisadesNY10964USA
- Department of Ecology, Evolution and Environmental BiologyColumbia UniversityNew YorkNY10027USA
- Lamont‐Doherty Earth ObservatoryColumbia UniversityPalisadesNY10964USA
| | - Mark G. Tjoelker
- Hawkesbury Institute for the EnvironmentWestern Sydney UniversityPenrithNSW2750Australia
| | - Majken Pagter
- Department of Chemistry and BioscienceAalborg UniversityFredrik Bajers Vej 7H9220AalborgDenmark
| | - Jinyan Yang
- Hawkesbury Institute for the EnvironmentWestern Sydney UniversityPenrithNSW2750Australia
| | - Dan Bruhn
- Department of Chemistry and BioscienceAalborg UniversityFredrik Bajers Vej 7H9220AalborgDenmark
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8
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O'Leary BM, Oh GGK, Millar AH. High-Throughput Oxygen Consumption Measurements in Leaf Tissue Using Oxygen Sensitive Fluorophores. Methods Mol Biol 2022; 2363:63-75. [PMID: 34545486 DOI: 10.1007/978-1-0716-1653-6_6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Respiratory rate measurements are crucial assays to understand mitochondrial biochemistry as well as metabolic regulation within tissues. Several technologies currently exist that can measure plant respiratory oxygen consumption or carbon dioxide evolution rates over short durations by either isolated mitochondria or plant tissues. Here we describe recently developed alternative methods for measuring tissue oxygen consumption rates (OCRs) using systems reliant on oxygen sensitive fluorophores. The methods described have distinct experimental advantages: they can allow high-throughput and long-duration measurements; and they are particularly suited to investigating the metabolic regulation of respiration by comparing OCRs among treatments or genotypes.
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Affiliation(s)
- Brendan M O'Leary
- Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, University of Western Australia, Perth, WA, Australia.
| | - Glenda Guek Khim Oh
- Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, University of Western Australia, Perth, WA, Australia
| | - A Harvey Millar
- Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, University of Western Australia, Perth, WA, Australia
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9
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Del-Saz NF, Douthe C, Carriquí M, Ortíz J, Sanhueza C, Rivas-Medina A, McDonald A, Fernie AR, Ribas-Carbo M, Gago J, Florez-Sarasa I, Flexas J. Different Metabolic Roles for Alternative Oxidase in Leaves of Palustrine and Terrestrial Species. FRONTIERS IN PLANT SCIENCE 2021; 12:752795. [PMID: 34804092 PMCID: PMC8600120 DOI: 10.3389/fpls.2021.752795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Accepted: 10/15/2021] [Indexed: 06/13/2023]
Abstract
The alternative oxidase pathway (AOP) is associated with excess energy dissipation in leaves of terrestrial plants. To address whether this association is less important in palustrine plants, we compared the role of AOP in balancing energy and carbon metabolism in palustrine and terrestrial environments by identifying metabolic relationships between primary carbon metabolites and AOP in each habitat. We measured oxygen isotope discrimination during respiration, gas exchange, and metabolite profiles in aerial leaves of ten fern and angiosperm species belonging to five families organized as pairs of palustrine and terrestrial species. We performed a partial least square model combined with variable importance for projection to reveal relationships between the electron partitioning to the AOP (τa) and metabolite levels. Terrestrial plants showed higher values of net photosynthesis (AN) and τa, together with stronger metabolic relationships between τa and sugars, important for water conservation. Palustrine plants showed relationships between τa and metabolites related to the shikimate pathway and the GABA shunt, to be important for heterophylly. Excess energy dissipation via AOX is less crucial in palustrine environments than on land. The basis of this difference resides in the contrasting photosynthetic performance observed in each environment, thus reinforcing the importance of AOP for photosynthesis.
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Affiliation(s)
- Nestor Fernandez Del-Saz
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Cyril Douthe
- Research Group on Plant Biology Under Mediterranean Conditions, Departament de Biologia, Institute of Agro-Environmental Research and Water Economy, Universitat de les Illes Balears, Illes Balears, Spain
| | - Marc Carriquí
- Research Group on Plant Biology Under Mediterranean Conditions, Departament de Biologia, Institute of Agro-Environmental Research and Water Economy, Universitat de les Illes Balears, Illes Balears, Spain
| | - Jose Ortíz
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Carolina Sanhueza
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Alicia Rivas-Medina
- Departamento de Ingeniería Topográfica y Cartografía, Escuela Técnica Superior de Ingenieros en Topografía, Geodesia y Cartografía, Universidad Politécnica de Madrid, Madrid, Spain
| | - Allison McDonald
- Department of Biology, Wilfrid Laurier University, Waterloo, ON, Canada
| | - Alisdair R. Fernie
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Potsdam, Germany
| | - Miquel Ribas-Carbo
- Research Group on Plant Biology Under Mediterranean Conditions, Departament de Biologia, Institute of Agro-Environmental Research and Water Economy, Universitat de les Illes Balears, Illes Balears, Spain
| | - Jorge Gago
- Research Group on Plant Biology Under Mediterranean Conditions, Departament de Biologia, Institute of Agro-Environmental Research and Water Economy, Universitat de les Illes Balears, Illes Balears, Spain
| | - Igor Florez-Sarasa
- Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Barcelona, Spain
- Institut de Recerca i Tecnología Agroalimentàries (IRTA), Edifici CRAG, Barcelona, Spain
| | - Jaume Flexas
- Research Group on Plant Biology Under Mediterranean Conditions, Departament de Biologia, Institute of Agro-Environmental Research and Water Economy, Universitat de les Illes Balears, Illes Balears, Spain
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10
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Møller IM, Rasmusson AG, Van Aken O. Plant mitochondria - past, present and future. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 108:912-959. [PMID: 34528296 DOI: 10.1111/tpj.15495] [Citation(s) in RCA: 86] [Impact Index Per Article: 28.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Revised: 09/02/2021] [Accepted: 09/06/2021] [Indexed: 06/13/2023]
Abstract
The study of plant mitochondria started in earnest around 1950 with the first isolations of mitochondria from animal and plant tissues. The first 35 years were spent establishing the basic properties of plant mitochondria and plant respiration using biochemical and physiological approaches. A number of unique properties (compared to mammalian mitochondria) were observed: (i) the ability to oxidize malate, glycine and cytosolic NAD(P)H at high rates; (ii) the partial insensitivity to rotenone, which turned out to be due to the presence of a second NADH dehydrogenase on the inner surface of the inner mitochondrial membrane in addition to the classical Complex I NADH dehydrogenase; and (iii) the partial insensitivity to cyanide, which turned out to be due to an alternative oxidase, which is also located on the inner surface of the inner mitochondrial membrane, in addition to the classical Complex IV, cytochrome oxidase. With the appearance of molecular biology methods around 1985, followed by genomics, further unique properties were discovered: (iv) plant mitochondrial DNA (mtDNA) is 10-600 times larger than the mammalian mtDNA, yet it only contains approximately 50% more genes; (v) plant mtDNA has kept the standard genetic code, and it has a low divergence rate with respect to point mutations, but a high recombinatorial activity; (vi) mitochondrial mRNA maturation includes a uniquely complex set of activities for processing, splicing and editing (at hundreds of sites); (vii) recombination in mtDNA creates novel reading frames that can produce male sterility; and (viii) plant mitochondria have a large proteome with 2000-3000 different proteins containing many unique proteins such as 200-300 pentatricopeptide repeat proteins. We describe the present and fairly detailed picture of the structure and function of plant mitochondria and how the unique properties make their metabolism more flexible allowing them to be involved in many diverse processes in the plant cell, such as photosynthesis, photorespiration, CAM and C4 metabolism, heat production, temperature control, stress resistance mechanisms, programmed cell death and genomic evolution. However, it is still a challenge to understand how the regulation of metabolism and mtDNA expression works at the cellular level and how retrograde signaling from the mitochondria coordinates all those processes.
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Affiliation(s)
- Ian Max Møller
- Department of Molecular Biology and Genetics, Aarhus University, Forsøgsvej 1, DK-4200, Slagelse, Denmark
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11
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Florez-Sarasa I, Welchen E, Racca S, Gonzalez DH, Vallarino JG, Fernie AR, Ribas-Carbo M, Del-Saz NF. Cytochrome c Deficiency Differentially Affects the In Vivo Mitochondrial Electron Partitioning and Primary Metabolism Depending on the Photoperiod. PLANTS 2021; 10:plants10030444. [PMID: 33652808 PMCID: PMC7996904 DOI: 10.3390/plants10030444] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Accepted: 02/18/2021] [Indexed: 02/06/2023]
Abstract
Plant respiration provides metabolic flexibility under changing environmental conditions by modulating the activity of the nonphosphorylating alternative pathways from the mitochondrial electron transport chain, which bypass the main energy-producing components of the cytochrome oxidase pathway (COP). While adjustments in leaf primary metabolism induced by changes in day length are well studied, possible differences in the in vivo contribution of the COP and the alternative oxidase pathway (AOP) between different photoperiods remain unknown. In our study, in vivo electron partitioning between AOP and COP and expression analysis of respiratory components, photosynthesis, and the levels of primary metabolites were studied in leaves of wild-type (WT) plants and cytochrome c (CYTc) mutants, with reduced levels of COP components, under short- and long-day photoperiods. Our results clearly show that differences in AOP and COP in vivo activities between WT and cytc mutants depend on the photoperiod likely due to energy and stress signaling constraints. Parallel responses observed between in vivo respiratory activities, TCA cycle intermediates, amino acids, and stress signaling metabolites indicate the coordination of different pathways of primary metabolism to support growth adaptation under different photoperiods.
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Affiliation(s)
- Igor Florez-Sarasa
- Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB, Campus UAB Bellaterra, 08193 Barcelona, Spain
- Correspondence: (I.F.-S.); (N.F.D.-S.); Tel.: +34-935-636-600 (I.F.-S.); Fax: +56-41-2221569 (N.F.D.-S.)
| | - Elina Welchen
- Instituto de Agrobiotecnología del Litoral (CONICET-UNL), Cátedra de Biología Celular y Molecular, Facultad de Bioquímica y Ciencias Biológicas, Universidad Nacional del Litoral, Santa Fe 3000, Argentina; (E.W.); (S.R.); (D.H.G.)
| | - Sofia Racca
- Instituto de Agrobiotecnología del Litoral (CONICET-UNL), Cátedra de Biología Celular y Molecular, Facultad de Bioquímica y Ciencias Biológicas, Universidad Nacional del Litoral, Santa Fe 3000, Argentina; (E.W.); (S.R.); (D.H.G.)
| | - Daniel H. Gonzalez
- Instituto de Agrobiotecnología del Litoral (CONICET-UNL), Cátedra de Biología Celular y Molecular, Facultad de Bioquímica y Ciencias Biológicas, Universidad Nacional del Litoral, Santa Fe 3000, Argentina; (E.W.); (S.R.); (D.H.G.)
| | - José G. Vallarino
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany; (J.G.V.); (A.R.F.)
| | - Alisdair R. Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany; (J.G.V.); (A.R.F.)
| | - Miquel Ribas-Carbo
- Research Group on Plant Biology, Balearic Islands University, Ctra Valldemossa km 7.5, 07122 Palma de Mallorca, Spain;
| | - Nestor Fernandez Del-Saz
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, 4030000 Concepción, Chile
- Correspondence: (I.F.-S.); (N.F.D.-S.); Tel.: +34-935-636-600 (I.F.-S.); Fax: +56-41-2221569 (N.F.D.-S.)
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12
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Martel AB, Taylor AE, Qaderi MM. Individual and interactive effects of temperature and light intensity on canola growth, physiological characteristics and methane emissions. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 157:160-168. [PMID: 33120108 DOI: 10.1016/j.plaphy.2020.10.016] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Accepted: 10/17/2020] [Indexed: 06/11/2023]
Abstract
Earlier studies have shown that plants produce methane (CH4) under aerobic conditions, and that this emission is not microbial in nature. However, the precursors of aerobic CH4 remain under debate, and the combined effects of environmental factors on plant-derived CH4 requires further attention. The objective of this study was to determine the interactive effects of temperature and light intensity on CH4 and other relevant plant parameters in canola (Brassica napus L.). Plants were grown under two temperature regimes (22/18 °C and 28/24 °C, 16 h light/8 h dark) and two light intensities (300 and 600 μmol photons m-2 s-1) for 21 days after one week of growth under 22/18 °C (16 h light/8 h dark). In this study, higher temperature had little effects on CH4 emissions from plants, indicating the mitigating effects of higher light intensity. Higher light intensity, however, significantly decreased CH4, which was inversely related to plant dry mass. Higher light intensity decreased stem height, leaf area ratio, chlorophyll, nitrogen balance index, leaf moisture, methionine (Met) and ethylene (C2H4), but increased specific leaf mass, photochemical quenching, flavonoids, epicuticular wax, lysine and tyrosine. The results revealed that increased CH4 emissions from plants could be related to changes in plant physiological activities, which portrayed themselves in increased C2H4 evolution, and methylated amino acids, such as Met. We conclude that higher light intensity reduces Met and, in turn, CH4 and C2H4 emissions, but lower light intensity enhances CH4 formation through cleavage of methyl group of amino acids by reactive oxygen species, as previously suggested.
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Affiliation(s)
- Ashley B Martel
- Department of Biology, Saint Mary's University, 923 Robie Street, Halifax, Nova Scotia, B3H 3C3, Canada
| | - Amanda E Taylor
- Department of Biology, Mount Saint Vincent University, 166 Bedford Highway, Halifax, Nova Scotia, B3M 2J6, Canada
| | - Mirwais M Qaderi
- Department of Biology, Saint Mary's University, 923 Robie Street, Halifax, Nova Scotia, B3H 3C3, Canada; Department of Biology, Mount Saint Vincent University, 166 Bedford Highway, Halifax, Nova Scotia, B3M 2J6, Canada.
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13
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Vanlerberghe GC, Dahal K, Alber NA, Chadee A. Photosynthesis, respiration and growth: A carbon and energy balancing act for alternative oxidase. Mitochondrion 2020; 52:197-211. [PMID: 32278748 DOI: 10.1016/j.mito.2020.04.001] [Citation(s) in RCA: 60] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2019] [Revised: 02/28/2020] [Accepted: 04/06/2020] [Indexed: 12/26/2022]
Abstract
This review summarizes knowledge of alternative oxidase, a mitochondrial electron transport chain component that lowers the ATP yield of plant respiration. Analysis of mutant and transgenic plants has established that alternative oxidase activity supports leaf photosynthesis. The interaction of alternative oxidase respiration with chloroplast metabolism is important under conditions that challenge energy and/or carbon balance in the photosynthetic cell. Under such conditions, alternative oxidase provides an extra-chloroplastic means to optimize the status of chloroplast energy pools (ATP, NADPH) and to manage cellular carbohydrate pools in response to changing rates of carbon fixation and carbon demand for growth and maintenance. Transcriptional and post-translational mechanisms ensure that alternative oxidase can respond effectively when carbon and energy balance are being challenged. This function appears particularly significant under abiotic stress conditions such as water deficit, high salinity, or temperature extremes. Under such conditions, alternative oxidase respiration positively affects growth and stress tolerance, despite it lowering the energy yield and carbon use efficiency of respiration. In part, this beneficial effect relates to the ability of alternative oxidase respiration to prevent excessive reactive oxygen species generation in both mitochondria and chloroplasts. Recent evidence suggests that alternative oxidase respiration is an interesting target for crop improvement.
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Affiliation(s)
- Greg C Vanlerberghe
- Department of Biological Sciences, and Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON M1C1A4, Canada.
| | - Keshav Dahal
- Fredericton Research and Development Centre, Agriculture and Agri-Food Canada, 850 Lincoln Road, P.O. Box 20280, Fredericton, New Brunswick E3B4Z7, Canada
| | - Nicole A Alber
- Department of Biological Sciences, and Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON M1C1A4, Canada
| | - Avesh Chadee
- Department of Biological Sciences, and Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON M1C1A4, Canada
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14
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Sanhueza C, Fuentes F, Cortés D, Bascunan-Godoy L, Sáez PL, Bravo LA, Cavieres LA. Contrasting thermal acclimation of leaf dark respiration and photosynthesis of Antarctic vascular plant species exposed to nocturnal warming. PHYSIOLOGIA PLANTARUM 2019; 167:205-216. [PMID: 30467866 DOI: 10.1111/ppl.12881] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Revised: 11/02/2018] [Accepted: 11/16/2018] [Indexed: 06/09/2023]
Abstract
Leaf respiration and photosynthesis will respond differently to an increase in temperature during night, which can be more relevant in sensitive ecosystems such as Antarctica. We postulate that the plant species able to colonize the Antarctic Peninsula - Colobanthus quitensis (Kunth) Bartl. and Deschampsia antarctica Desv. - are able to acclimate their foliar respiration and to maintain photosynthesis under nocturnal warming to sustain a positive foliar carbon balance. We conducted a laboratory experiment to evaluate the effect of time of day (day and night) and nocturnal warming on dark respiration. Short (E0 and Q10 ) and long-term acclimation of respiration, leaf carbohydrates, photosynthesis (Asat ) and foliar carbon balance (R/A) were evaluated. The results suggest that the two species have differential thermal acclimation respiration, where D. antarctica showed more thermosensitivity to short-term changes in temperature than C. quitensis. Experimental nocturnal warming affected respiration at daytime differentially between the two species, with a significant increase of R10 and Asat in D. antarctica, while no changes on respiration were observed in C. quitensis. Long thermal treatments of the plants indicated that nocturnal but not diurnal respiration could acclimate in both species, and to a greater extent in C. quitensis. Non-structural carbohydrates were related with respiration in C. quitensis but not in D. antarctica, suggesting that respiration in the former species is likely controlled by total soluble sugars and starch during day and night, respectively. Finally, foliar carbon balance was differentially improved under warming conditions in Antarctic plants by different mechanisms, with C. quitensis deploying respiratory acclimation, while D. antarctica increased its Asat.
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Affiliation(s)
- Carolina Sanhueza
- Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Francisca Fuentes
- Laboratorio Cultivo de Tejidos Vegetales, Centro de Biotecnología, Departamento de Silvicultura, Facultad de Ciencias Forestales, Universidad de Concepción, Concepción, Chile
| | - Daniela Cortés
- Laboratorio Cultivo de Tejidos Vegetales, Centro de Biotecnología, Departamento de Silvicultura, Facultad de Ciencias Forestales, Universidad de Concepción, Concepción, Chile
| | - Luisa Bascunan-Godoy
- Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
- Instituto de Investigación Multidisciplinar en Ciencia y Tecnología, Universidad de La Serena, Coquimbo, Chile
| | - Patricia L Sáez
- Laboratorio Cultivo de Tejidos Vegetales, Centro de Biotecnología, Departamento de Silvicultura, Facultad de Ciencias Forestales, Universidad de Concepción, Concepción, Chile
| | - León A Bravo
- Laboratorio de Fisiología y Biología Molecular Vegetal, Instituto de Agroindustria, Departamento de Ciencias Agronómicas y Recursos Naturales, Facultad de Ciencias Agropecuarias y Forestales and Center of Plant, Soil Interaction and Natural Resources Biotechnology, Scientific and Technological Bioresource Nucleus, Universidad de La Frontera, Temuco, Chile
| | - Lohengrin A Cavieres
- Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
- Departamento de Ciencias Ecológicas, Facultad de Ciencias de la Universidad de Chile, Instituto de Ecología y Biodiversidad-IEB, Santiago, Chile
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15
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Sunil B, Saini D, Bapatla RB, Aswani V, Raghavendra AS. Photorespiration is complemented by cyclic electron flow and the alternative oxidase pathway to optimize photosynthesis and protect against abiotic stress. PHOTOSYNTHESIS RESEARCH 2019; 139:67-79. [PMID: 30187303 DOI: 10.1007/s11120-018-0577-x] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2018] [Accepted: 08/24/2018] [Indexed: 05/02/2023]
Abstract
Optimization of photosynthetic performance and protection against abiotic stress are essential to sustain plant growth. Photorespiratory metabolism can help plants to adapt to abiotic stress. The beneficial role of photorespiration under abiotic stress is further strengthened by cyclic electron flow (CEF) and alternative oxidase (AOX) pathways. We have attempted to critically assess the literature on the responses of these three phenomena-photorespiration, CEF and AOX, to different stress situations. We emphasize that photorespiration is the key player to protect photosynthesis and upregulates CEF as well as AOX. Then these three processes work in coordination to protect the plants against photoinhibition and maintain an optimal redox state in the cell, while providing ATP for metabolism and protein repair. H2O2 generated during photorespiratory metabolism seems to be an important signal to upregulate CEF or AOX. Further experiments are necessary to identify the signals originating from CEF or AOX to modulate photorespiration. The mutants deficient in CEF or AOX or both could be useful in this regard. The mutual interactions between CEF and AOX, so as to keep their complementarity, are also to be examined further.
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Affiliation(s)
- Bobba Sunil
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India
| | - Deepak Saini
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India
| | - Ramesh B Bapatla
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India
| | - Vetcha Aswani
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India
| | - Agepati S Raghavendra
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India.
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16
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Martel AB, Qaderi MM. Unravelling the effects of blue light on aerobic methane emissions from canola. JOURNAL OF PLANT PHYSIOLOGY 2019; 233:12-19. [PMID: 30576928 DOI: 10.1016/j.jplph.2018.12.006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2018] [Revised: 11/24/2018] [Accepted: 12/12/2018] [Indexed: 06/09/2023]
Abstract
It is now well documented that plants produce methane (CH4) under aerobic conditions. However, the nature of methane production in plants and all the potential precursors and environmental factors that can be involved in the process are not fully understood. Earlier studies have suggested several chemical compounds, including the amino acid methionine, as precursors of aerobic methane in plants, but none have explored other amino acids as potential precursors or blue light as a driving force of methane emission. We examined the effects of blue light, and the promoter or inhibitor of endogenous ethylene on methane and ethylene emissions, amino acids, and some plant physiological parameters in canola (Brassica napus). Plants were grown under four light conditions: no supplemental blue light, and low, medium, or high blue light, and exposed to three chemical treatments: no chemical application, ethylene promoter (kinetin), or ethylene inhibitor (silver nitrate). Regardless of chemical treatment, blue light significantly increased methane emission, which was accompanied by decreased plant biomass, gas exchange, and flavonoids, but by increased wax, and most amino acids. This study revealed that blue light drives aerobic methane emission from plants by releasing of methyl group from a number of amino acids, and that the methane production in plants may have several pathways.
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Affiliation(s)
- Ashley B Martel
- Department of Biology, Saint Mary's University, 923 Robie Street, Halifax, Nova Scotia B3H 3C3, Canada
| | - Mirwais M Qaderi
- Department of Biology, Saint Mary's University, 923 Robie Street, Halifax, Nova Scotia B3H 3C3, Canada; Department of Biology, Mount Saint Vincent University, 166 Bedford Highway, Halifax, Nova Scotia B3M 2J6, Canada.
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17
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Blume C, Ost J, Mühlenbruch M, Peterhänsel C, Laxa M. Low CO2 induces urea cycle intermediate accumulation in Arabidopsis thaliana. PLoS One 2019; 14:e0210342. [PMID: 30650113 PMCID: PMC6334940 DOI: 10.1371/journal.pone.0210342] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2018] [Accepted: 12/20/2018] [Indexed: 12/26/2022] Open
Abstract
The non-proteinogenic amino acid ornithine links several stress response pathways. From a previous study we know that ornithine accumulates in response to low CO2. To investigate ornithine accumulation in plants, we shifted plants to either low CO2 or low light. Both conditions increased carbon limitation, but only low CO2 also increased the rate of photorespiration. Changes in metabolite profiles of light- and CO2-limited plants were quite similar. Several amino acids that are known markers of senescence accumulated strongly under both conditions. However, urea cycle intermediates respond differently between the two treatments. While the levels of both ornithine and citrulline were much higher in plants shifted to 100 ppm CO2 compared to those kept in 400 ppm CO2, their metabolite abundance did not significantly change in response to a light limitation. Furthermore, both ornithine and citrulline accumulation is independent from sugar starvation. Exogenous supplied sugar did not significantly change the accumulation of the two metabolites in low CO2-stressed plants, while the accumulation of other amino acids was reduced by about 50%. Gene expression measurements showed a reduction of the entire arginine biosynthetic pathway in response to low CO2. Genes in both proline biosynthesis and degradation were induced. Hence, proline did not accumulate in response to low CO2 like observed for many other stresses. We propose that excess of nitrogen re-fixed during photorespiration can be alternatively stored in ornithine and citrulline under low CO2 conditions. Furthermore, ornithine is converted to pyrroline-5-carboxylate by the action of δOAT.
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Affiliation(s)
- Christian Blume
- Institute of Botany, Leibniz University Hannover, Hannover, Germany
| | - Julia Ost
- Institute of Botany, Leibniz University Hannover, Hannover, Germany
| | | | | | - Miriam Laxa
- Institute of Botany, Leibniz University Hannover, Hannover, Germany
- * E-mail:
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18
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Measurements of Electron Partitioning Between Cytochrome and Alternative Oxidase Pathways in Plant Tissues. Methods Mol Biol 2018; 1670:203-217. [PMID: 28871545 DOI: 10.1007/978-1-4939-7292-0_17] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/27/2023]
Abstract
Plant respiration is characterized by the existence of the alternative oxidase pathway (AOP) that competes with cytochrome oxidase pathway (COP) for the electrons of the ubiquinone pool of the mitochondrial electron transport chain, thus reducing ATP synthesis. The oxygen (O2) isotope fractionation technique is the only available to determine the electron partitioning between the two pathways and their in vivo activities in plant tissues. In this chapter, the basis of the O2 isotope fractionation technique and its derived calculations are carefully explained together with a detailed description of the dual-inlet isotope ratio mass spectrometry (DI-IRMS) system and the protocol developed at the University of Balearic Islands. The key advantages of the DI-IRMS over other systems are highlighted as well as the potential problems of this technique. Among these problems, those associated with leakage, diffusion, and inhibitor treatments are noted and solutions to prevent, detect, and repair these problems are detailed.
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19
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Del-Saz NF, Ribas-Carbo M, McDonald AE, Lambers H, Fernie AR, Florez-Sarasa I. An In Vivo Perspective of the Role(s) of the Alternative Oxidase Pathway. TRENDS IN PLANT SCIENCE 2018; 23:206-219. [PMID: 29269217 DOI: 10.1016/j.tplants.2017.11.006] [Citation(s) in RCA: 93] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2017] [Revised: 10/18/2017] [Accepted: 11/15/2017] [Indexed: 05/02/2023]
Abstract
Despite intense research on the in vitro characterization of regulatory factors modulating the alternative oxidase (AOX) pathway, the regulation of its activity in vivo is still not fully understood. Advances concerning in vivo regulation of AOX based on the oxygen-isotope fractionation technique are reviewed, and regulatory factors that merit future research are highlighted. In addition, we review and discuss the main biological functions assigned to the plant AOX, and suggest future experiments involving in vivo activity measurements to test different hypothesized physiological roles.
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Affiliation(s)
- Néstor Fernández Del-Saz
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122 Palma de Mallorca, Spain
| | - Miquel Ribas-Carbo
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122 Palma de Mallorca, Spain
| | - Allison E McDonald
- Department of Biology, Wilfrid Laurier University, Science Building, 75 University Avenue West, Waterloo, ON N2L 3C5, Canada
| | - Hans Lambers
- School of Biological Sciences, University of Western Australia, 35 Stirling Highway, Crawley (Perth), Western Australia 6009, Australia
| | - Alisdair R Fernie
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany
| | - Igor Florez-Sarasa
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany.
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20
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Romero-Munar A, Del-Saz NF, Ribas-Carbó M, Flexas J, Baraza E, Florez-Sarasa I, Fernie AR, Gulías J. Arbuscular Mycorrhizal Symbiosis with Arundo donax Decreases Root Respiration and Increases Both Photosynthesis and Plant Biomass Accumulation. PLANT, CELL & ENVIRONMENT 2017; 40:1115-1126. [PMID: 28060998 DOI: 10.1111/pce.12902] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2016] [Revised: 12/28/2016] [Accepted: 01/02/2017] [Indexed: 05/12/2023]
Abstract
The effect of arbuscular mycorrhiza (AM) symbiosis on plant growth is associated with the balance between costs and benefits. A feedback regulation loop has been described in which the higher carbohydrate cost to plants for AM symbiosis is compensated by increases in their photosynthetic rates. Nevertheless, plant carbon balance depends both on photosynthetic carbon uptake and respiratory carbon consumption. The hypothesis behind this research was that the role of respiration in plant growth under AM symbiosis may be as important as that of photosynthesis. This hypothesis was tested in Arundo donax L. plantlets inoculated with Rhizophagus irregularis and Funneliformis mosseae. We tested the effects of AM inoculation on both photosynthetic capacity and in vivo leaf and root respiration. Additionally, analyses of the primary metabolism and ion content were performed in both leaves and roots. AM inoculation increased photosynthesis through increased CO2 diffusion and electron transport in the chloroplast. Moreover, respiration decreased only in AM roots via the cytochrome oxidase pathway (COP) as measured by the oxygen isotope technique. This decline in the COP can be related to the reduced respiratory metabolism and substrates (sugars and tricarboxylic acid cycle intermediates) observed in roots.
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Affiliation(s)
- Antònia Romero-Munar
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Departament de Biologia, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122, Palma de Mallorca, Spain
| | - Néstor Fernández Del-Saz
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Departament de Biologia, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122, Palma de Mallorca, Spain
| | - Miquel Ribas-Carbó
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Departament de Biologia, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122, Palma de Mallorca, Spain
| | - Jaume Flexas
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Departament de Biologia, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122, Palma de Mallorca, Spain
| | - Elena Baraza
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Departament de Biologia, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122, Palma de Mallorca, Spain
| | - Igor Florez-Sarasa
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg, 1, 14476, Potsdam-Golm, Germany
| | - Alisdair Robert Fernie
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg, 1, 14476, Potsdam-Golm, Germany
| | - Javier Gulías
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Departament de Biologia, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122, Palma de Mallorca, Spain
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21
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Han X, Tohge T, Lalor P, Dockery P, Devaney N, Esteves-Ferreira AA, Fernie AR, Sulpice R. Phytochrome A and B Regulate Primary Metabolism in Arabidopsis Leaves in Response to Light. FRONTIERS IN PLANT SCIENCE 2017; 8:1394. [PMID: 28848593 PMCID: PMC5552712 DOI: 10.3389/fpls.2017.01394] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2017] [Accepted: 07/26/2017] [Indexed: 05/18/2023]
Abstract
Primary metabolism is closely linked to plant productivity and quality. Thus, a better understanding of the regulation of primary metabolism by photoreceptors has profound implications for agricultural practices and management. This study aims at identifying the role of light signaling in the regulation of primary metabolism, with an emphasis on starch. We first screened seven cryptochromes and phytochromes mutants for starch phenotype. The phyAB mutant showed impairment in starch accumulation while its biomass, chlorophyll fluorescence parameters, and leaf anatomy were unaffected, this deficiency being present over the whole vegetative growth period. Mutation of plastidial nucleoside diphosphate kinase-2 (NDPK2), acting downstream of phytochromes, also caused a deficit in starch accumulation. Besides, the glucose-1-phosphate adenylyltransferase small subunit (APS1) was down-regulated in phyAB. Those results suggest that PHYAB affect starch accumulation through NDPK2 and APS1. Then, we determined changes in starch and primary metabolites in single phyA, single phyB, double phyAB grown in light conditions differing in light intensity and/or light spectral content. PHYA is involved in starch accumulation in all the examined light conditions, whereas PHYB only exhibits a role under low light intensity (44 ± 1 μmol m-2 s-1) or low R:FR (11.8 ± 0.6). PCA analysis of the metabolic profiles in the mutants and wild type (WT) suggested that PHYB acts as a major regulator of the leaf metabolic status in response to light intensity. Overall, we propose that PHYA and PHYB signaling play essential roles in the control of primary metabolism in Arabidopsis leaves in response to light.
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Affiliation(s)
- Xiaozhen Han
- Plant Systems Biology Research Lab, Plant and AgriBiosciences, School of Natural Sciences, NUI GalwayGalway, Ireland
| | - Takayuki Tohge
- Max Planck Institute of Molecular Plant PhysiologyPotsdam-Golm, Germany
| | - Pierce Lalor
- Centre for Microscopy and Imaging, Anatomy, School of Medicine, NUI GalwayGalway, Ireland
| | - Peter Dockery
- Centre for Microscopy and Imaging, Anatomy, School of Medicine, NUI GalwayGalway, Ireland
| | - Nicholas Devaney
- Applied Optics Group, School of Physics, NUI GalwayGalway, Ireland
| | - Alberto A. Esteves-Ferreira
- Plant Systems Biology Research Lab, Plant and AgriBiosciences, School of Natural Sciences, NUI GalwayGalway, Ireland
| | | | - Ronan Sulpice
- Plant Systems Biology Research Lab, Plant and AgriBiosciences, School of Natural Sciences, NUI GalwayGalway, Ireland
- *Correspondence: Ronan Sulpice,
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22
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Florez-Sarasa I, Ribas-Carbo M, Del-Saz NF, Schwahn K, Nikoloski Z, Fernie AR, Flexas J. Unravelling the in vivo regulation and metabolic role of the alternative oxidase pathway in C3 species under photoinhibitory conditions. THE NEW PHYTOLOGIST 2016; 212:66-79. [PMID: 27321208 DOI: 10.1111/nph.14030] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2016] [Accepted: 04/23/2016] [Indexed: 06/06/2023]
Abstract
The mitochondrial alternative oxidase pathway (AOP) has been suggested to act as a sink for excess reducing power generated in the chloroplast under high-light (HL) stress and thus may reduce photoinhibition. The aim of this study was to compare different species to investigate the in vivo regulation and role of AOP under HL stress. The in vivo activities of AOP (νalt ) and the cytochrome oxidase pathway, chlorophyll fluorescence, metabolite profiles, alternative oxidase (AOX) capacity and protein amount were determined in leaves of five C3 species under growth light and after HL treatment. Differences in respiration and metabolite levels were observed among species under growth light conditions. The HL response of νalt was highly species dependent, correlated with the AOP capacity and independent of AOX protein content. Nevertheless, significant correlations were observed between νalt , levels of key metabolites and photosynthetic parameters. The results show that the species-specific response of νalt is caused by the differential post-translational regulation of AOX. Significant correlations between respiration, metabolites and photosynthetic performance across species suggest that AOP may permit stress-related amino acid synthesis, whilst maintaining photosynthetic activity under HL stress.
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Affiliation(s)
- Igor Florez-Sarasa
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Miquel Ribas-Carbo
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Departament de Biologia, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122, Palma de Mallorca, Spain
| | - Néstor Fernández Del-Saz
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Departament de Biologia, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122, Palma de Mallorca, Spain
| | - Kevin Schwahn
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Zoran Nikoloski
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Alisdair R Fernie
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Jaume Flexas
- Grup de Recerca en Biologia de les Plantes en Condicions Mediterranies, Departament de Biologia, Universitat de les Illes Balears, Carretera de Valldemossa Km 7.5, 07122, Palma de Mallorca, Spain
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23
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Lehmann MM, Wegener F, Barthel M, Maurino VG, Siegwolf RTW, Buchmann N, Werner C, Werner RA. Metabolic Fate of the Carboxyl Groups of Malate and Pyruvate and their Influence on δ(13)C of Leaf-Respired CO2 during Light Enhanced Dark Respiration. FRONTIERS IN PLANT SCIENCE 2016; 7:739. [PMID: 27375626 PMCID: PMC4891945 DOI: 10.3389/fpls.2016.00739] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2016] [Accepted: 05/13/2016] [Indexed: 05/03/2023]
Abstract
The enhanced CO2 release of illuminated leaves transferred into darkness, termed "light enhanced dark respiration (LEDR)", is often associated with an increase in the carbon isotope ratio of the respired CO2 (δ(13)CLEDR). The latter has been hypothesized to result from different respiratory substrates and decarboxylation reactions in various metabolic pathways, which are poorly understood so far. To provide a better insight into the underlying metabolic processes of δ(13)CLEDR, we fed position-specific (13)C-labeled malate and pyruvate via the xylem stream to leaves of species with high and low δ(13)CLEDR values (Halimium halimifolium and Oxalis triangularis, respectively). During respective label application, we determined label-derived leaf (13)CO2 respiration using laser spectroscopy and the (13)C allocation to metabolic fractions during light-dark transitions. Our results clearly show that both carboxyl groups (C-1 and C-4 position) of malate similarly influence respiration and metabolic fractions in both species, indicating possible isotope randomization of the carboxyl groups of malate by the fumarase reaction. While C-2 position of pyruvate was only weakly respired, the species-specific difference in natural δ(13)CLEDR patterns were best reflected by the (13)CO2 respiration patterns of the C-1 position of pyruvate. Furthermore, (13)C label from malate and pyruvate were mainly allocated to amino and organic acid fractions in both species and only little to sugar and lipid fractions. In summary, our results suggest that respiration of both carboxyl groups of malate (via fumarase) by tricarboxylic acid cycle reactions or by NAD-malic enzyme influences δ(13)CLEDR. The latter supplies the pyruvate dehydrogenase reaction, which in turn determines natural δ(13)CLEDR pattern by releasing the C-1 position of pyruvate.
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Affiliation(s)
- Marco M. Lehmann
- Laboratory of Atmospheric Chemistry, Paul Scherrer InstituteVilligen, Switzerland
- Institute of Agricultural Sciences, ETH ZurichZurich, Switzerland
| | | | - Matti Barthel
- Institute of Agricultural Sciences, ETH ZurichZurich, Switzerland
| | - Veronica G. Maurino
- Plant Molecular Physiology and Biotechnology Group, Institute of Developmental and Molecular Biology of Plants, Heinrich Heine University and Cluster of Excellence on Plant Sciences (CEPLAS)Düsseldorf, Germany
| | - Rolf T. W. Siegwolf
- Laboratory of Atmospheric Chemistry, Paul Scherrer InstituteVilligen, Switzerland
| | - Nina Buchmann
- Institute of Agricultural Sciences, ETH ZurichZurich, Switzerland
| | | | - Roland A. Werner
- Institute of Agricultural Sciences, ETH ZurichZurich, Switzerland
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24
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Tohge T, Scossa F, Fernie AR. Integrative Approaches to Enhance Understanding of Plant Metabolic Pathway Structure and Regulation. PLANT PHYSIOLOGY 2015; 169:1499-511. [PMID: 26371234 PMCID: PMC4634077 DOI: 10.1104/pp.15.01006] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2015] [Accepted: 09/10/2015] [Indexed: 05/05/2023]
Abstract
Huge insight into molecular mechanisms and biological network coordination have been achieved following the application of various profiling technologies. Our knowledge of how the different molecular entities of the cell interact with one another suggests that, nevertheless, integration of data from different techniques could drive a more comprehensive understanding of the data emanating from different techniques. Here, we provide an overview of how such data integration is being used to aid the understanding of metabolic pathway structure and regulation. We choose to focus on the pairwise integration of large-scale metabolite data with that of the transcriptomic, proteomics, whole-genome sequence, growth- and yield-associated phenotypes, and archival functional genomic data sets. In doing so, we attempt to provide an update on approaches that integrate data obtained at different levels to reach a better understanding of either single gene function or metabolic pathway structure and regulation within the context of a broader biological process.
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Affiliation(s)
- Takayuki Tohge
- Max-Planck-Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany (T.T., A.R.F.); andConsiglio per la Ricerca e Analisi dell'Economia Agraria, Centro di Ricerca per la Frutticoltura, 00134 Rome, Italy (F.S.)
| | - Federico Scossa
- Max-Planck-Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany (T.T., A.R.F.); andConsiglio per la Ricerca e Analisi dell'Economia Agraria, Centro di Ricerca per la Frutticoltura, 00134 Rome, Italy (F.S.)
| | - Alisdair R Fernie
- Max-Planck-Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany (T.T., A.R.F.); andConsiglio per la Ricerca e Analisi dell'Economia Agraria, Centro di Ricerca per la Frutticoltura, 00134 Rome, Italy (F.S.)
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25
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Markelz RJC, Vosseller LN, Leakey ADB. Developmental stage specificity of transcriptional, biochemical and CO2 efflux responses of leaf dark respiration to growth of Arabidopsis thaliana at elevated [CO2]. PLANT, CELL & ENVIRONMENT 2014; 37:2542-52. [PMID: 24635671 DOI: 10.1111/pce.12323] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2013] [Revised: 03/07/2014] [Accepted: 03/10/2014] [Indexed: 05/10/2023]
Abstract
Plant respiration responses to elevated growth [CO(2)] are key uncertainties in predicting future crop and ecosystem function. In particular, the effects of elevated growth [CO(2)] on respiration over leaf development are poorly understood. This study tested the prediction that, due to greater whole plant photoassimilate availability and growth, elevated [CO(2)] induces transcriptional reprogramming and a stimulation of nighttime respiration in leaf primordia, expanding leaves and mature leaves of Arabidopsis thaliana. In primordia, elevated [CO(2)] altered transcript abundance, but not for genes encoding respiratory proteins. In expanding leaves, elevated [CO(2)] induced greater glucose content and transcript abundance for some respiratory genes, but did not alter respiratory CO(2) efflux. In mature leaves, elevated [CO(2)] led to greater glucose, sucrose and starch content, plus greater transcript abundance for many components of the respiratory pathway, and greater respiratory CO(2) efflux. Therefore, growth at elevated [CO(2)] stimulated dark respiration only after leaves transitioned from carbon sinks into carbon sources. This coincided with greater photoassimilate production by mature leaves under elevated [CO(2)] and peak respiratory transcriptional responses. It remains to be determined if biochemical and transcriptional responses to elevated [CO(2)] in primordial and expanding leaves are essential prerequisites for subsequent alterations of respiratory metabolism in mature leaves.
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Affiliation(s)
- R J Cody Markelz
- Department of Plant Biology and Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA
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26
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Nogués S, Aljazairi S, Arias C, Sánchez E, Aranjuelo I. Two distinct plant respiratory physiotypes might exist which correspond to fast-growing and slow-growing species. JOURNAL OF PLANT PHYSIOLOGY 2014; 171:1157-1163. [PMID: 24973588 DOI: 10.1016/j.jplph.2014.03.006] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2014] [Revised: 03/04/2014] [Accepted: 03/19/2014] [Indexed: 06/03/2023]
Abstract
The origin of the carbon atoms in CO2 respired by leaves in the dark of several plant species has been studied using 13C/12C stable isotopes. This study was conducted using an open gas exchange system for isotope labeling that was coupled to an elemental analyzer and further linked to an isotope ratio mass spectrometer (EA-IRMS) or coupled to a gas chromatography-combustion-isotope ratio mass spectrometer (GC-C-IRMS). We demonstrate here that the carbon, which is recently assimilated during photosynthesis, accounts for nearly ca. 50% of the carbon in the CO2 lost through dark respiration (Rd) after illumination in fast-growing and cultivated plants and trees and, accounts for only ca. 10% in slow-growing plants. Moreover, our study shows that fast-growing plants, which had the largest percentages of newly fixed carbon of leaf-respired CO2, were also those with the largest shoot/root ratios, whereas slow-growing plants showed the lowest shoot/root values.
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Affiliation(s)
- Salvador Nogués
- Unitat de Fisiologia Vegetal, Departament de Biologia Vegetal, Universitat de Barcelona, E-08028 Barcelona, Spain.
| | - Salvador Aljazairi
- Unitat de Fisiologia Vegetal, Departament de Biologia Vegetal, Universitat de Barcelona, E-08028 Barcelona, Spain
| | - Claudia Arias
- Unitat de Fisiologia Vegetal, Departament de Biologia Vegetal, Universitat de Barcelona, E-08028 Barcelona, Spain
| | - Elena Sánchez
- Unitat de Fisiologia Vegetal, Departament de Biologia Vegetal, Universitat de Barcelona, E-08028 Barcelona, Spain
| | - Iker Aranjuelo
- Unitat de Fisiologia Vegetal, Departament de Biologia Vegetal, Universitat de Barcelona, E-08028 Barcelona, Spain
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27
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Atkin OK, Meir P, Turnbull MH. Improving representation of leaf respiration in large-scale predictive climate-vegetation models. THE NEW PHYTOLOGIST 2014; 202:743-748. [PMID: 24716517 DOI: 10.1111/nph.12686] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Affiliation(s)
- Owen K Atkin
- Division of Plant Sciences, Research School of Biology, The Australian National University, Building 46, Canberra, ACT, 0200, Australia
| | - Patrick Meir
- Division of Plant Sciences, Research School of Biology, The Australian National University, Building 46, Canberra, ACT, 0200, Australia
| | - Matthew H Turnbull
- School of Biological Sciences, University of Canterbury, Private Bag, 4800, Christchurch, New Zealand
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28
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Araújo WL, Nunes-Nesi A, Fernie AR. On the role of plant mitochondrial metabolism and its impact on photosynthesis in both optimal and sub-optimal growth conditions. PHOTOSYNTHESIS RESEARCH 2014; 119:141-156. [PMID: 23456269 DOI: 10.1007/s11120-013-9807-4] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2012] [Accepted: 02/18/2013] [Indexed: 06/01/2023]
Abstract
Given that the pathways of photosynthesis and respiration catalyze partially opposing processes, it follows that their relative activities must be carefully regulated within plant cells. Recent evidence has shown that the components of the mitochondrial electron transport chain are essential for the proper maintenance of intracellular redox gradients, to allow considerable rates of photorespiration and in turn efficient photosynthesis. Thus considerable advances have been made in understanding the interaction between respiration and photosynthesis during the last decades and the potential mechanisms linking mitochondrial function and photosynthetic efficiency will be reviewed. Despite the fact that manipulation of various steps of mitochondrial metabolism has been demonstrated to alter photosynthesis under optimal growth conditions, it is likely that these changes will, by and large, not be maintained under sub-optimal situations. Therefore producing plants to meet this aim remains a critical challenge. It is clear, however, that although there have been a range of studies analysing changes in respiratory and photosynthetic rates in response to light, temperature and CO2, our knowledge of the environmental impact on these processes and its linkage still remains fragmented. We will also discuss the metabolic changes associated to plant respiration and photosynthesis as important components of the survival strategy as they considerably extend the period that a plant can withstand to a stress situation.
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Affiliation(s)
- Wagner L Araújo
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, MG, 36570-000, Brazil
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29
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Wang J, Vanlerberghe GC. A lack of mitochondrial alternative oxidase compromises capacity to recover from severe drought stress. PHYSIOLOGIA PLANTARUM 2013; 149:461-73. [PMID: 23582049 DOI: 10.1111/ppl.12059] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2013] [Revised: 03/25/2013] [Accepted: 04/07/2013] [Indexed: 05/19/2023]
Abstract
Alternative oxidase (AOX) constitutes a nonenergy conserving branch of the mitochondrial electron transport chain. AOX activity may be important to avoid reactive oxygen species (ROS) generation by the chain, particularly during abiotic stress. We compared leaf AOX1a transcript and AOX protein amounts in wild-type (WT) Nicotiana tabacum plants experiencing mild to severe drought. Mild to moderate drought resulted in a progressive and modest increase in AOX amount, accompanied by a progressive increased expression of different ROS-scavenging components. Under these conditions, transgenic plants with suppressed AOX amount, due to an RNA interference construct, were not compromised in their ability to manage ROS load and prevent cellular damage. Severe drought stress, particularly when combined with increased irradiance, strongly increased AOX amount in WT tobacco and this coincided with an increase in total respiration and, despite further induction of ROS-scavenging systems, some evidence of cellular damage. Under these severe conditions, plants lacking AOX suffered more cellular damage than WT and, at the most severe stage, were found to downregulate rather than upregulate the transcript level of several important ROS-scavenging components. At this stage, WT plants could still recover rapidly after rewatering, but the recoverability of AOX knockdown plants was strongly compromised.
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Affiliation(s)
- Jia Wang
- Department of Biological Sciences and Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON, Canada, M1C 1A4
| | - Greg C Vanlerberghe
- Department of Biological Sciences and Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON, Canada, M1C 1A4
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30
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Chi Y, Xu M, Shen R, Wan S. Acclimation of leaf dark respiration to nocturnal and diurnal warming in a semiarid temperate steppe. FUNCTIONAL PLANT BIOLOGY : FPB 2013; 40:1159-1167. [PMID: 32481183 DOI: 10.1071/fp12369] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2012] [Accepted: 05/13/2013] [Indexed: 06/11/2023]
Abstract
A better understanding of thermal acclimation of leaf dark respiration in response to nocturnal and diurnal warming could help accurately predict the changes in carbon exchange of terrestrial ecosystems under global warming, especially under the asymmetric warming. A field manipulative experiment was established with control, nocturnal warming (1800-0600hours), diurnal warming (0600-1800hours), and diel warming (24h) under naturally fluctuating conditions in a semiarid temperate steppe in northern China in April 2006. Temperature response curves of in situ leaf dark respiration for Stipa krylovii Roshev. were measured at night (Rn) and after 30min of darkness imposed in the daytime (Rd). Leaf nonstructural carbohydrates were determined before sunrise and at sunset. Results showed that Rn could acclimate to nocturnal warming and diurnal warming, but Rd could not. The decreases in Q10 (temperature sensitivity) of Rn under nocturnal-warming and diurnal warming regimes might be attributed to greater depletion of total nonstructural carbohydrates (TNC). The real-time and intertwined metabolic interactions between chloroplastic and mitochondrial metabolism in the daytime could affect the impacts of warming on metabolite pools and the distinct response of Rn and Rd to warming. Projection on climate change-carbon feedback under climate warming must account for thermal acclimation of leaf dark respiration separately by Rn and Rd.
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Affiliation(s)
- Yonggang Chi
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Ming Xu
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Ruichang Shen
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Shiqiang Wan
- Key Laboratory of Plant Stress Biology, College of Life Sciences, Henan University, Henan 475004, China
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31
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Slot M, Wright SJ, Kitajima K. Foliar respiration and its temperature sensitivity in trees and lianas: in situ measurements in the upper canopy of a tropical forest. TREE PHYSIOLOGY 2013; 33:505-15. [PMID: 23592296 DOI: 10.1093/treephys/tpt026] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Leaf dark respiration (R) and its temperature sensitivity are essential for efforts to model carbon fluxes in tropical forests under current and future temperature regimes, but insufficient data exist to generalize patterns of R in species-rich tropical forests. Here, we tested the hypothesis that R and its temperature sensitivity (expressed as Q10, the proportional increase in R with a 10 °C rise in temperature) vary in relation to leaf functional traits, and among plant functional types (PFTs). We conducted in situ measurements of R of 461 leaves of 26 species of tree and liana in the upper canopy of a tropical forest in Panama. A construction crane allowed repeated non-destructive access to measure leaves kept in the dark since the previous night and equilibrated to the ambient temperature of 23-31 °C in the morning. R at 25 °C (R25) varied among species (mean 1.11 μmol m(-2) s(-1); range 0.72-1.79 μmol m(-2) s(-1)) but did not differ significantly among PFTs. R25 correlated positively with photosynthetic capacity, leaf mass per unit area, concentrations of nitrogen and phosphorus, and negatively with leaf lifespan. Q10 estimated for each species was on average higher than the 2.0 often assumed in coupled climate-vegetation models (mean 2.19; range 1.24-3.66). Early-successional tree species had higher Q10 values than other functional types, but interspecific variation in Q10 values was not correlated with other leaf traits. Similarity in respiration characteristics across PFTs, and relatively strong correlations of R with other leaf functional traits offer potential for trait-based vegetation modeling in species-rich tropical forests.
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Affiliation(s)
- Martijn Slot
- Department of Biology, University of Florida, Gainesville, FL 32611, USA.
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32
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Kornfeld A, Heskel M, Atkin OK, Gough L, Griffin KL, Horton TW, Turnbull MH. Respiratory flexibility and efficiency are affected by simulated global change in Arctic plants. THE NEW PHYTOLOGIST 2013; 197:1161-1172. [PMID: 23278298 DOI: 10.1111/nph.12083] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2012] [Accepted: 11/04/2012] [Indexed: 06/01/2023]
Abstract
Laboratory studies indicate that, in response to environmental conditions, plants modulate respiratory electron partitioning between the 'energy-wasteful' alternative pathway (AP) and the 'energy-conserving' cytochrome pathway (CP). Field data, however, are scarce. Here we investigate how 20-yr field manipulations simulating global change affected electron partitioning in Alaskan Arctic tundra species. We sampled leaves from three dominant tundra species - Betula nana, Eriophorum vaginatum and Rubus chamaemorus - that had been strongly affected by manipulations of soil nutrients, light availability, and warming. We measured foliar dark respiration, in-vivo electron partitioning and alternative oxidase/cytochrome c oxidase concentrations in addition to leaf traits and mitochondrial ultrastructure. Changes in leaf traits and ultrastructure were similar across species. Respiration at 20°C (R(20)) was reduced 15% in all three species grown at elevated temperature, suggesting thermal acclimation of respiration. In Betula, the species with the largest growth response to added nutrients, CP activity increased from 9.4 ± 0.8 to 16.6 ± 1.6 nmol O(2) g(-1) DM s(-1) whereas AP activity was unchanged. The ability of Betula to selectively increase CP activity in response to the environment may contribute to its overall ecological success by increasing respiratory energy efficiency, and thus retaining more carbon for growth.
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Affiliation(s)
- Ari Kornfeld
- School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch, 8140, New Zealand
| | - Mary Heskel
- Department of Ecology, Evolution, and Environmental Biology, Columbia University, New York, NY, 10027, USA
| | - Owen K Atkin
- Division of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT, 0200, Australia
| | - Laura Gough
- Department of Biology, University of Texas at Arlington, Arlington, TX, 76019, USA
| | - Kevin L Griffin
- Department of Ecology, Evolution, and Environmental Biology, Columbia University, New York, NY, 10027, USA
- Department of Earth and Environmental Sciences, Columbia University, New York, NY, 10027, USA
- Lamont-Doherty Earth Observatory, Columbia University, 61 Rt 9W, Palisades, NY, 10964, USA
| | - Travis W Horton
- Department of Geological Sciences, University of Canterbury, Private Bag 4800, Christchurch, 8140, New Zealand
| | - Matthew H Turnbull
- School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch, 8140, New Zealand
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33
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Shah JK, Cochrane DW, De Paepe R, Igamberdiev AU. Respiratory complex I deficiency results in low nitric oxide levels, induction of hemoglobin and upregulation of fermentation pathways. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2013; 63:185-90. [PMID: 23266363 DOI: 10.1016/j.plaphy.2012.11.022] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2012] [Accepted: 11/26/2012] [Indexed: 05/09/2023]
Abstract
The cytoplasmic male-sterile (CMS) mutant of Nicotiana sylvestris which lacks NAD7, one of the subunits of respiratory complex I (NADH: ubiquinone oxidoreductase, EC 1.6.5.3), is characterized by very low (~10 times lower as compared to the wild type plants) emissions of nitric oxide (NO) under hypoxic conditions. The level of the non-symbiotic class 1 hemoglobin, as shown by Western blotting, is increased compared to the wild type plants not only under hypoxia but this protein reveals its marked expression in the CMS mutant even under normoxic conditions. The activity of aconitase (EC 4.2.1.3) is low in the CMS mutant, especially in the mitochondrial compartment, which indicates the suppression of the tricarboxylic acid cycle. The CMS mutant exhibits the severalfold higher activities of alcohol dehydrogenase (EC 1.1.1.1) and lactate dehydrogenase (EC 1.1.1.27) under the normoxic conditions as compared to the wild type plants. It is concluded that the lack of functional complex I results in upregulation of the pathways of hypoxic metabolism which include both fermentation of pyruvate and scavenging of NO by the non-symbiotic hemoglobin.
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Affiliation(s)
- Jay K Shah
- Department of Biology, Memorial University of Newfoundland, St. John's, NL A1B 3X9, Canada
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34
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Griffin KL, Turnbull MH. Out of the light and into the dark: post-illumination respiratory metabolism. THE NEW PHYTOLOGIST 2012; 195:4-7. [PMID: 22626261 DOI: 10.1111/j.1469-8137.2012.04181.x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Affiliation(s)
- Kevin L Griffin
- Departments of Earth and Environmental Sciences and Ecology, Evolution and Environmental Biology, Columbia University, Palisades, NY 10964, USA.
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