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Ono T, Iramina H, Hirashima H, Adachi T, Nakamura M, Mizowaki T. Applications of artificial intelligence for machine- and patient-specific quality assurance in radiation therapy: current status and future directions. JOURNAL OF RADIATION RESEARCH 2024; 65:421-432. [PMID: 38798135 PMCID: PMC11262865 DOI: 10.1093/jrr/rrae033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Revised: 03/26/2024] [Indexed: 05/29/2024]
Abstract
Machine- and patient-specific quality assurance (QA) is essential to ensure the safety and accuracy of radiotherapy. QA methods have become complex, especially in high-precision radiotherapy such as intensity-modulated radiation therapy (IMRT) and volumetric modulated arc therapy (VMAT), and various recommendations have been reported by AAPM Task Groups. With the widespread use of IMRT and VMAT, there is an emerging demand for increased operational efficiency. Artificial intelligence (AI) technology is quickly growing in various fields owing to advancements in computers and technology. In the radiotherapy treatment process, AI has led to the development of various techniques for automated segmentation and planning, thereby significantly enhancing treatment efficiency. Many new applications using AI have been reported for machine- and patient-specific QA, such as predicting machine beam data or gamma passing rates for IMRT or VMAT plans. Additionally, these applied technologies are being developed for multicenter studies. In the current review article, AI application techniques in machine- and patient-specific QA have been organized and future directions are discussed. This review presents the learning process and the latest knowledge on machine- and patient-specific QA. Moreover, it contributes to the understanding of the current status and discusses the future directions of machine- and patient-specific QA.
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Affiliation(s)
- Tomohiro Ono
- Department of Radiation Oncology, Shiga General Hospital, 5-4-30 Moriyama, Moriyama-shi 524-8524, Shiga, Japan
- Department of Radiation Oncology and Image-Applied Therapy, Graduate School of Medicine, Kyoto University, 54 Kawahara-cho, Shogoin, Sakyo-ku, Kyoto 606-8507, Japan
| | - Hiraku Iramina
- Department of Radiation Oncology and Image-Applied Therapy, Graduate School of Medicine, Kyoto University, 54 Kawahara-cho, Shogoin, Sakyo-ku, Kyoto 606-8507, Japan
| | - Hideaki Hirashima
- Department of Radiation Oncology and Image-Applied Therapy, Graduate School of Medicine, Kyoto University, 54 Kawahara-cho, Shogoin, Sakyo-ku, Kyoto 606-8507, Japan
| | - Takanori Adachi
- Department of Radiation Oncology and Image-Applied Therapy, Graduate School of Medicine, Kyoto University, 54 Kawahara-cho, Shogoin, Sakyo-ku, Kyoto 606-8507, Japan
| | - Mitsuhiro Nakamura
- Division of Medical Physics, Department of Information Technology and Medical Engineering, Human Health Sciences, Graduate School of Medicine, Kyoto University, 53 Kawahara-cho, Shogoin, Sakyo-ku, Kyoto 606-8507, Japan
| | - Takashi Mizowaki
- Department of Radiation Oncology and Image-Applied Therapy, Graduate School of Medicine, Kyoto University, 54 Kawahara-cho, Shogoin, Sakyo-ku, Kyoto 606-8507, Japan
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Shan G, Yu S, Lai Z, Xuan Z, Zhang J, Wang B, Ge Y. A Review of Artificial Intelligence Application for Radiotherapy. Dose Response 2024; 22:15593258241263687. [PMID: 38912333 PMCID: PMC11193352 DOI: 10.1177/15593258241263687] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Accepted: 05/03/2024] [Indexed: 06/25/2024] Open
Abstract
Background and Purpose Artificial intelligence (AI) is a technique which tries to think like humans and mimic human behaviors. It has been considered as an alternative in a lot of human-dependent steps in radiotherapy (RT), since the human participation is a principal uncertainty source in RT. The aim of this work is to provide a systematic summary of the current literature on AI application for RT, and to clarify its role for RT practice in terms of clinical views. Materials and Methods A systematic literature search of PubMed and Google Scholar was performed to identify original articles involving the AI applications in RT from the inception to 2022. Studies were included if they reported original data and explored the clinical applications of AI in RT. Results The selected studies were categorized into three aspects of RT: organ and lesion segmentation, treatment planning and quality assurance. For each aspect, this review discussed how these AI tools could be involved in the RT protocol. Conclusions Our study revealed that AI was a potential alternative for the human-dependent steps in the complex process of RT.
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Affiliation(s)
- Guoping Shan
- School of Electronic Science and Engineering, Nanjing University, Nanjing, China
- Zhejiang Cancer Hospital, Hangzhou, China
| | - Shunfei Yu
- Zhejiang Provincial Center for Disease Control and Prevention, Hangzhou, China
| | - Zhongjun Lai
- Zhejiang Provincial Center for Disease Control and Prevention, Hangzhou, China
| | - Zhiqiang Xuan
- Zhejiang Provincial Center for Disease Control and Prevention, Hangzhou, China
| | - Jie Zhang
- Zhejiang Cancer Hospital, Hangzhou, China
| | | | - Yun Ge
- School of Electronic Science and Engineering, Nanjing University, Nanjing, China
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Riis HL, Chick J, Dunlop A, Tilly D. The Quality Assurance of a 1.5 T MR-Linac. Semin Radiat Oncol 2024; 34:120-128. [PMID: 38105086 DOI: 10.1016/j.semradonc.2023.10.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
The recent introduction of a commercial 1.5 T MR-linac system has considerably improved the image quality of the patient acquired in the treatment unit as well as enabling online adaptive radiation therapy (oART) treatment strategies. Quality Assurance (QA) of this new technology requires new methodology that allows for the high field MR in a linac environment. The presence of the magnetic field requires special attention to the phantoms, detectors, and tools to perform QA. Due to the design of the system, the integrated megavoltage imager (MVI) is essential for radiation beam calibrations and QA. Additionally, the alignment between the MR image system and the radiation isocenter must be checked. The MR-linac system has vendor-supplied phantoms for calibration and QA tests. However, users have developed their own routine QA systems to independently check that the machine is performing as required, as to ensure we are able to deliver the intended dose with sufficient certainty. The aim of this work is therefore to review the MR-linac specific QA procedures reported in the literature.
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Affiliation(s)
- Hans Lynggaard Riis
- Department of Oncology, Odense University Hospital, Odense, Denmark; Department of Clinical Research, University of Southern Denmark, Odense, Denmark.
| | - Joan Chick
- The Joint Department of Physics, The Royal Marsden Hospital and the Institute of Cancer Research, London, UK
| | - Alex Dunlop
- The Joint Department of Physics, The Royal Marsden Hospital and the Institute of Cancer Research, London, UK
| | - David Tilly
- Department of Immunology, Genetics and Pathology, Medical Radiation Physics, Uppsala University, Uppsala, Sweden; Medical Physics, Uppsala University Hospital, Uppsala, Sweden
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Liu J, Xiao H, Fan J, Hu W, Yang Y, Dong P, Xing L, Cai J. An overview of artificial intelligence in medical physics and radiation oncology. JOURNAL OF THE NATIONAL CANCER CENTER 2023; 3:211-221. [PMID: 39035195 PMCID: PMC11256546 DOI: 10.1016/j.jncc.2023.08.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2022] [Revised: 05/03/2023] [Accepted: 08/08/2023] [Indexed: 07/23/2024] Open
Abstract
Artificial intelligence (AI) is developing rapidly and has found widespread applications in medicine, especially radiotherapy. This paper provides a brief overview of AI applications in radiotherapy, and highlights the research directions of AI that can potentially make significant impacts and relevant ongoing research works in these directions. Challenging issues related to the clinical applications of AI, such as robustness and interpretability of AI models, are also discussed. The future research directions of AI in the field of medical physics and radiotherapy are highlighted.
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Affiliation(s)
- Jiali Liu
- Department of Clinical Oncology, The University of Hong Kong-Shenzhen Hospital, Shenzhen, China
- Department of Clinical Oncology, Hong Kong University Li Ka Shing Medical School, Hong Kong, China
| | - Haonan Xiao
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong, China
| | - Jiawei Fan
- Department of Radiation Oncology, Fudan University Shanghai Cancer Center, Shanghai, China
- Department of Oncology, Shanghai Medical College, Fudan University, Shanghai, China
- Shanghai Key Laboratory of Radiation Oncology, Shanghai, China
| | - Weigang Hu
- Department of Radiation Oncology, Fudan University Shanghai Cancer Center, Shanghai, China
- Department of Oncology, Shanghai Medical College, Fudan University, Shanghai, China
- Shanghai Key Laboratory of Radiation Oncology, Shanghai, China
| | - Yong Yang
- Department of Radiation Oncology, Stanford University, CA, USA
| | - Peng Dong
- Department of Radiation Oncology, Stanford University, CA, USA
| | - Lei Xing
- Department of Radiation Oncology, Stanford University, CA, USA
| | - Jing Cai
- Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong, China
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Li J, Wang D, Chan M. Predictive quality assurance for linear accelerator target failure using statistical process control. Biomed Phys Eng Express 2023; 9:055018. [PMID: 37437550 DOI: 10.1088/2057-1976/ace6a1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Accepted: 07/12/2023] [Indexed: 07/14/2023]
Abstract
The performance of a linear accelerator (Linac) depends on the integrity of its x-ray target. The sudden failure of its target not only breaks down the Linac but also could contribute significant disruptions to patient care. This work is to develop a predicative quality assurance (QA) method using Statistical Process Control (SPC) and AutoRegressive Integrated Moving Average (ARIMA) modeling to identify the risk of target failure before it occurs. In the past years, we observed two incidents of target failure among our Linacs. Retrospectively, we collected past daily QA data (from both open fields and enhanced dynamic wedge (EDW) measurements) and analyzed its historical trend using methods of SPC and ARIMA. SPC is a technique that monitors process performance based on statistical analysis. ARIMA is a time-series forecasting algorithm that can be used to estimate future values based on its past pattern. Both have been evaluated for predictive QA in radiotherapy. Application of SPC on open beam QA data would not yield an early warning signal to the pending target failures. However, when the same SPC methodology applies to EDW measurements, the control limits were breached a couple of weeks before the target failed. EDW mechanism introduces nonuniform magnification factors over its wedge-directed beam profiles and is responsible for the sensitivity of its profile to changing beam properties induced by a degrading target. Further extension of the warning period may be possible by using ARIMA modeling. Predicative QA for EDW daily data using SPC and ARIMA methods may provide an early QA warning to incoming Linac target failure.
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Affiliation(s)
- Jingdong Li
- Memorial Sloan-Kettering Cancer Center at Basking Ridge, NJ, United States of America
| | - Dongxu Wang
- Memorial Sloan-Kettering Cancer Center at Basking Ridge, NJ, United States of America
| | - Maria Chan
- Memorial Sloan-Kettering Cancer Center at Basking Ridge, NJ, United States of America
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Krishnamurthy R, Mummudi N, Goda JS, Chopra S, Heijmen B, Swamidas J. Using Artificial Intelligence for Optimization of the Processes and Resource Utilization in Radiotherapy. JCO Glob Oncol 2022; 8:e2100393. [PMID: 36395438 PMCID: PMC10166445 DOI: 10.1200/go.21.00393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The radiotherapy (RT) process from planning to treatment delivery is a multistep, complex operation involving numerous levels of human-machine interaction and requiring high precision. These steps are labor-intensive and time-consuming and require meticulous coordination between professionals with diverse expertise. We reviewed and summarized the current status and prospects of artificial intelligence and machine learning relevant to the various steps in RT treatment planning and delivery workflow specifically in low- and middle-income countries (LMICs). We also searched the PubMed database using the search terms (Artificial Intelligence OR Machine Learning OR Deep Learning OR Automation OR knowledge-based planning AND Radiotherapy) AND (list of Low- and Middle-Income Countries as defined by the World Bank at the time of writing this review). The search yielded a total of 90 results, of which results with first authors from the LMICs were chosen. The reference lists of retrieved articles were also reviewed to search for more studies. No language restrictions were imposed. A total of 20 research items with unique study objectives conducted with the aim of enhancing RT processes were examined in detail. Artificial intelligence and machine learning can improve the overall efficiency of RT processes by reducing human intervention, aiding decision making, and efficiently executing lengthy, repetitive tasks. This improvement could permit the radiation oncologist to redistribute resources and focus on responsibilities such as patient counseling, education, and research, especially in resource-constrained LMICs.
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Affiliation(s)
- Revathy Krishnamurthy
- Department of Radiation Oncology, Tata Memorial Centre, Homi Bhabha National Institute, Mumbai, India
| | - Naveen Mummudi
- Department of Radiation Oncology, Tata Memorial Centre, Homi Bhabha National Institute, Mumbai, India
| | - Jayant Sastri Goda
- Department of Radiation Oncology, Tata Memorial Centre, Homi Bhabha National Institute, Mumbai, India
| | - Supriya Chopra
- Department of Radiation Oncology, Tata Memorial Centre, Homi Bhabha National Institute, Mumbai, India
| | - Ben Heijmen
- Division of Medical Physics, Department of Radiation Oncology, Erasmus MC Cancer Institute, Erasmus University Rotterdam, Rotterdam, the Netherlands
| | - Jamema Swamidas
- Department of Radiation Oncology, Tata Memorial Centre, Homi Bhabha National Institute, Mumbai, India
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7
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Li G, Wu X, Ma X. Artificial intelligence in radiotherapy. Semin Cancer Biol 2022; 86:160-171. [PMID: 35998809 DOI: 10.1016/j.semcancer.2022.08.005] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Accepted: 08/18/2022] [Indexed: 11/19/2022]
Abstract
Radiotherapy is a discipline closely integrated with computer science. Artificial intelligence (AI) has developed rapidly over the past few years. With the explosive growth of medical big data, AI promises to revolutionize the field of radiotherapy through highly automated workflow, enhanced quality assurance, improved regional balances of expert experiences, and individualized treatment guided by multi-omics. In addition to independent researchers, the increasing number of large databases, biobanks, and open challenges significantly facilitated AI studies on radiation oncology. This article reviews the latest research, clinical applications, and challenges of AI in each part of radiotherapy including image processing, contouring, planning, quality assurance, motion management, and outcome prediction. By summarizing cutting-edge findings and challenges, we aim to inspire researchers to explore more future possibilities and accelerate the arrival of AI radiotherapy.
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Affiliation(s)
- Guangqi Li
- Division of Biotherapy, Cancer Center, West China Hospital and State Key Laboratory of Biotherapy, Sichuan University, No. 37 GuoXue Alley, Chengdu 610041, China
| | - Xin Wu
- Head & Neck Oncology ward, Division of Radiotherapy Oncology, Cancer Center, West China Hospital, Sichuan University, No. 37 GuoXue Alley, Chengdu 610041, China
| | - Xuelei Ma
- Division of Biotherapy, Cancer Center, West China Hospital and State Key Laboratory of Biotherapy, Sichuan University, No. 37 GuoXue Alley, Chengdu 610041, China.
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8
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Barragán-Montero A, Bibal A, Dastarac MH, Draguet C, Valdés G, Nguyen D, Willems S, Vandewinckele L, Holmström M, Löfman F, Souris K, Sterpin E, Lee JA. Towards a safe and efficient clinical implementation of machine learning in radiation oncology by exploring model interpretability, explainability and data-model dependency. Phys Med Biol 2022; 67:10.1088/1361-6560/ac678a. [PMID: 35421855 PMCID: PMC9870296 DOI: 10.1088/1361-6560/ac678a] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Accepted: 04/14/2022] [Indexed: 01/26/2023]
Abstract
The interest in machine learning (ML) has grown tremendously in recent years, partly due to the performance leap that occurred with new techniques of deep learning, convolutional neural networks for images, increased computational power, and wider availability of large datasets. Most fields of medicine follow that popular trend and, notably, radiation oncology is one of those that are at the forefront, with already a long tradition in using digital images and fully computerized workflows. ML models are driven by data, and in contrast with many statistical or physical models, they can be very large and complex, with countless generic parameters. This inevitably raises two questions, namely, the tight dependence between the models and the datasets that feed them, and the interpretability of the models, which scales with its complexity. Any problems in the data used to train the model will be later reflected in their performance. This, together with the low interpretability of ML models, makes their implementation into the clinical workflow particularly difficult. Building tools for risk assessment and quality assurance of ML models must involve then two main points: interpretability and data-model dependency. After a joint introduction of both radiation oncology and ML, this paper reviews the main risks and current solutions when applying the latter to workflows in the former. Risks associated with data and models, as well as their interaction, are detailed. Next, the core concepts of interpretability, explainability, and data-model dependency are formally defined and illustrated with examples. Afterwards, a broad discussion goes through key applications of ML in workflows of radiation oncology as well as vendors' perspectives for the clinical implementation of ML.
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Affiliation(s)
- Ana Barragán-Montero
- Molecular Imaging, Radiation and Oncology (MIRO) Laboratory, Institut de Recherche Expérimentale et Clinique (IREC), UCLouvain, Belgium
| | - Adrien Bibal
- PReCISE, NaDI Institute, Faculty of Computer Science, UNamur and CENTAL, ILC, UCLouvain, Belgium
| | - Margerie Huet Dastarac
- Molecular Imaging, Radiation and Oncology (MIRO) Laboratory, Institut de Recherche Expérimentale et Clinique (IREC), UCLouvain, Belgium
| | - Camille Draguet
- Molecular Imaging, Radiation and Oncology (MIRO) Laboratory, Institut de Recherche Expérimentale et Clinique (IREC), UCLouvain, Belgium
- Department of Oncology, Laboratory of Experimental Radiotherapy, KU Leuven, Belgium
| | - Gilmer Valdés
- Department of Radiation Oncology, Department of Epidemiology and Biostatistics, University of California, San Francisco, United States of America
| | - Dan Nguyen
- Medical Artificial Intelligence and Automation (MAIA) Laboratory, Department of Radiation Oncology, UT Southwestern Medical Center, United States of America
| | - Siri Willems
- ESAT/PSI, KU Leuven Belgium & MIRC, UZ Leuven, Belgium
| | | | | | | | - Kevin Souris
- Molecular Imaging, Radiation and Oncology (MIRO) Laboratory, Institut de Recherche Expérimentale et Clinique (IREC), UCLouvain, Belgium
| | - Edmond Sterpin
- Molecular Imaging, Radiation and Oncology (MIRO) Laboratory, Institut de Recherche Expérimentale et Clinique (IREC), UCLouvain, Belgium
- Department of Oncology, Laboratory of Experimental Radiotherapy, KU Leuven, Belgium
| | - John A Lee
- Molecular Imaging, Radiation and Oncology (MIRO) Laboratory, Institut de Recherche Expérimentale et Clinique (IREC), UCLouvain, Belgium
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Ma M, Liu C, Wei R, Liang B, Dai J. Predicting machine's performance record using the stacked long short-term memory (LSTM) neural networks. J Appl Clin Med Phys 2022; 23:e13558. [PMID: 35170838 PMCID: PMC8906230 DOI: 10.1002/acm2.13558] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2021] [Revised: 11/23/2021] [Accepted: 01/21/2022] [Indexed: 01/02/2023] Open
Abstract
Purpose The record of daily quality control (QC) items shows machine performance patterns and potentially provides warning messages for preventive actions. This study developed a neural network model that could predict the record and trend of data variations quantitively. Methods and materials The record of 24 QC items for a radiotherapy machine was investigated in our institute. The QC records were collected daily for 3 years. The stacked long short‐term memory (LSTM) model was used to develop the neural network model. A total of 867 records were collected to predict the record for the next 5 days. To compare the stacked LSTM, the autoregressive integrated moving average model (ARIMA) was developed on the same data set. The accuracy of the model was quantified by the mean absolute error (MAE), root‐mean‐square error (RMSE), and coefficient of determination (R2). To validate the robustness of the model, the record of four QC items was collected for another radiotherapy machine, which was input into the stacked LSTM model without changing any hyperparameters and ARIMA model. Results The mean MAE, RMSE, andR2 with 24 QC items were 0.013, 0.020, and 0.853 in LSTM, while 0.021, 0.030, and 0.618 in ARIMA, respectively. The results showed that the stacked LSTM outperforms the ARIMA. Moreover, the mean MAE, RMSE, andR2 with four QC items were 0.102, 0.151, and 0.770 in LSTM, while 0.162, 0.375, and 0.550 in ARIMA, respectively. Conclusions In this study, the stacked LSTM model can accurately predict the record and trend of QC items. Moreover, the stacked LSTM model is robust when applied to another radiotherapy machine. Predicting future performance record will foresee possible machine failure, allowing early machine maintenance and reducing unscheduled machine downtime.
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Affiliation(s)
- Min Ma
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China
| | - Chenbin Liu
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital and Shenzhen Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Shenzhen, China
| | - Ran Wei
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China
| | - Bin Liang
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China
| | - Jianrong Dai
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China
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Improving the Quality of Care in Radiation Oncology using Artificial Intelligence. Clin Oncol (R Coll Radiol) 2021; 34:89-98. [PMID: 34887152 DOI: 10.1016/j.clon.2021.11.011] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 10/20/2021] [Accepted: 11/12/2021] [Indexed: 12/13/2022]
Abstract
Radiation therapy is a complex process involving multiple professionals and steps from simulation to treatment planning to delivery, and these procedures are prone to error. Additionally, the imaging and treatment delivery equipment in radiotherapy is highly complex and interconnected and represents another risk point in the quality of care. Numerous quality assurance tasks are carried out to ensure quality and to detect and prevent potential errors in the process of care. Recent developments in artificial intelligence provide potential tools to the radiation oncology community to improve the efficiency and performance of quality assurance efforts. Targets for artificial intelligence enhancement include the quality assurance of treatment plans, target and tissue structure delineation used in the plans, delivery of the plans and the radiotherapy delivery equipment itself. Here we review recent developments of artificial intelligence applications that aim to improve quality assurance processes in radiation therapy and discuss some of the challenges and limitations that require further development work to realise the potential of artificial intelligence for quality assurance.
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Zhao W, Shen L, Islam MT, Qin W, Zhang Z, Liang X, Zhang G, Xu S, Li X. Artificial intelligence in image-guided radiotherapy: a review of treatment target localization. Quant Imaging Med Surg 2021; 11:4881-4894. [PMID: 34888196 PMCID: PMC8611462 DOI: 10.21037/qims-21-199] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2021] [Accepted: 07/05/2021] [Indexed: 01/06/2023]
Abstract
Modern conformal beam delivery techniques require image-guidance to ensure the prescribed dose to be delivered as planned. Recent advances in artificial intelligence (AI) have greatly augmented our ability to accurately localize the treatment target while sparing the normal tissues. In this paper, we review the applications of AI-based algorithms in image-guided radiotherapy (IGRT), and discuss the indications of these applications to the future of clinical practice of radiotherapy. The benefits, limitations and some important trends in research and development of the AI-based IGRT techniques are also discussed. AI-based IGRT techniques have the potential to monitor tumor motion, reduce treatment uncertainty and improve treatment precision. Particularly, these techniques also allow more healthy tissue to be spared while keeping tumor coverage the same or even better.
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Affiliation(s)
- Wei Zhao
- School of Physics, Beihang University, Beijing, China
| | - Liyue Shen
- Department of Radiation Oncology, Stanford University, Stanford, USA
| | - Md Tauhidul Islam
- Department of Radiation Oncology, Stanford University, Stanford, USA
| | - Wenjian Qin
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
| | - Zhicheng Zhang
- Department of Radiation Oncology, Stanford University, Stanford, USA
| | - Xiaokun Liang
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
| | - Gaolong Zhang
- School of Physics, Beihang University, Beijing, China
| | - Shouping Xu
- Department of Radiation Oncology, PLA General Hospital, Beijing, China
| | - Xiaomeng Li
- Department of Electronic and Computer Engineering, Hong Kong University of Science and Technology, Hong Kong, China
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Siciarz P, Alfaifi S, Uytven EV, Rathod S, Koul R, McCurdy B. Machine learning for dose-volume histogram based clinical decision-making support system in radiation therapy plans for brain tumors. Clin Transl Radiat Oncol 2021; 31:50-57. [PMID: 34632117 PMCID: PMC8487981 DOI: 10.1016/j.ctro.2021.09.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Revised: 08/27/2021] [Accepted: 09/06/2021] [Indexed: 11/17/2022] Open
Abstract
Extraction, analysis, and interpretation of historical treatment planning data is valuable but very time-consuming. Proposed machine learning model classifies radiotherapy plans based on their treatment planning objectives and trade-offs. Application of double nested cross-validation enabled to build a robust model that achieved 94% accuracy on a testing data. Model reasoning investigated with SHAP values showed consistency with clinical observations.
Purpose To create and investigate a novel, clinical decision-support system using machine learning (ML). Methods and Materials The ML model was developed based on 79 radiotherapy plans of brain tumor patients that were prescribed a total dose of 60 Gy delivered with volumetric-modulated arc therapy (VMAT). Structures considered for analysis included planning target volume (PTV), brainstem, cochleae, and optic chiasm. The model aimed to classify the target variable that included class-0 corresponding to plans for which the PTV treatment planning objective was met and class-1 that was associated with plans for which the PTV objective was not met due to the priority trade-off to meet one or more organs-at-risk constraints. Several models were evaluated using double-nested cross-validation and an area-under-the-curve (AUC) metric, with the highest performing one selected for further investigation. The model predictions were explained with Shapely additive explanation (SHAP) interaction values. Results The highest-performing model was Logistic Regression achieving an accuracy of 93.8 ± 4.1% and AUC of 0.98 ± 0.02 on the testing data. The SHAP analysis indicated that the ΔD99% metric for PTV had the greatest influence on the model predictions. The least important feature was ΔDMAX for the left and right cochleae. Conclusions The trained model achieved satisfactory accuracy and can be used by medical physicists in a data-driven quality assurance program as well as by radiation oncologists to support their decision-making process in terms of treatment plan approval and potential plan modifications. Model explanation analysis showed that the model relies on clinically valid logic when making predictions.
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Affiliation(s)
- Pawel Siciarz
- Department of Medical Physics, CancerCare Manitoba, 675 McDermot Avenue, Winnipeg, MB R3E 0V9, Canada
- Department of Physics and Astronomy, University of Manitoba, Allen Building, Winnipeg, MB R3T 2N2, Canada
- Corresponding author at: Department of Medical Physics, CancerCare Manitoba, 675 McDermot Avenue, Winnipeg, MB R3E 0V9, Canada.
| | - Salem Alfaifi
- Radiation Oncology Resident, Department of Radiation Oncology, CancerCare Manitoba, 675 McDermot Avenue, Winnipeg, MB R3E 0V9, Canada
| | - Eric Van Uytven
- Radiation Oncology Resident, Department of Radiation Oncology, CancerCare Manitoba, 675 McDermot Avenue, Winnipeg, MB R3E 0V9, Canada
| | - Shrinivas Rathod
- Radiation Oncology Resident, Department of Radiation Oncology, CancerCare Manitoba, 675 McDermot Avenue, Winnipeg, MB R3E 0V9, Canada
- Department of Radiology, University of Manitoba, GA216-820 Sherbrook Street, Winnipeg, MB R3T 2N2, Canada
| | - Rashmi Koul
- Department of Radiology, University of Manitoba, GA216-820 Sherbrook Street, Winnipeg, MB R3T 2N2, Canada
- Medical Director and Head, Radiation Oncology Program, Department of Radiation Oncology, CancerCare Manitoba, 675 McDermot Avenue, Winnipeg, MB R3E 0V9, Canada
| | - Boyd McCurdy
- Department of Physics and Astronomy, University of Manitoba, Allen Building, Winnipeg, MB R3T 2N2, Canada
- Department of Radiology, University of Manitoba, GA216-820 Sherbrook Street, Winnipeg, MB R3T 2N2, Canada
- Head of Radiation Oncology Physics Group, Department of Medical Physics, CancerCare Manitoba, 675 McDermot Avenue, Winnipeg, MB R3E 0V9, Canada
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Saba T, Abunadi I, Shahzad MN, Khan AR. Machine learning techniques to detect and forecast the daily total COVID-19 infected and deaths cases under different lockdown types. Microsc Res Tech 2021. [PMID: 33522669 DOI: 10.1002/jemt] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/15/2023]
Abstract
COVID-19 has impacted the world in many ways, including loss of lives, economic downturn and social isolation. COVID-19 was emerged due to the SARS-CoV-2 that is highly infectious pandemic. Every country tried to control the COVID-19 spread by imposing different types of lockdowns. Therefore, there is an urgent need to forecast the daily confirmed infected cases and deaths in different types of lockdown to select the most appropriate lockdown strategies to control the intensity of this pandemic and reduce the burden in hospitals. Currently are imposed three types of lockdown (partial, herd, complete) in different countries. In this study, three countries from every type of lockdown were studied by applying time-series and machine learning models, named as random forests, K-nearest neighbors, SVM, decision trees (DTs), polynomial regression, Holt winter, ARIMA, and SARIMA to forecast daily confirm infected cases and deaths due to COVID-19. The models' accuracy and effectiveness were evaluated by error based on three performance criteria. Actually, a single forecasting model could not capture all data sets' trends due to the varying nature of data sets and lockdown types. Three top-ranked models were used to predict the confirmed infected cases and deaths, the outperformed models were also adopted for the out-of-sample prediction and obtained very close results to the actual values of cumulative infected cases and deaths due to COVID-19. This study has proposed the auspicious models for forecasting and the best lockdown strategy to mitigate the causalities of COVID-19.
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Affiliation(s)
- Tanzila Saba
- Artificial Intelligence and Data Analytics Lab, CCIS Prince Sultan University, Riyadh, Saudi Arabia
| | - Ibrahim Abunadi
- Artificial Intelligence and Data Analytics Lab, CCIS Prince Sultan University, Riyadh, Saudi Arabia
| | | | - Amjad Rehman Khan
- Artificial Intelligence and Data Analytics Lab, CCIS Prince Sultan University, Riyadh, Saudi Arabia
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14
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Artificial intelligence for quality assurance in radiotherapy. Cancer Radiother 2021; 25:623-626. [PMID: 34176724 DOI: 10.1016/j.canrad.2021.06.012] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Revised: 05/26/2021] [Accepted: 06/02/2021] [Indexed: 11/24/2022]
Abstract
In radiotherapy, patient-specific quality assurance is very time-consuming and causes machine downtime. It consists of testing (using measurement with a phantom and detector) if a modulated plan is correctly delivered by a treatment unit. Artificial intelligence and in particular machine learning algorithms were mentioned in recent reports as promising solutions to reduce or eliminate the patient-specific quality assurance workload. Several teams successfully experienced a virtual patient-specific quality assurance by training a machine learning tool to predict the results. Training data are generally composed of previous treatment plans and associated patient-specific quality assurance results. However, other training data types were recently introduced such as actual positions and velocities of multileaf collimators, metrics of the plan's complexity, and gravity vectors. Different types of machine learning algorithms were investigated (Poisson regression algorithms, convolutional neural networks, support vector classifiers) with sometimes promising results. These tools are being used for treatment units' quality assurance as well, in particular to analyse the results of imaging devices. Most of these reports were feasibility studies. Using machine learning in clinical routines as a tool that could fully replace quality assurance tests conducted by physics teams has yet to be implemented.
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15
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Ip WY, Yeung FK, Yung SPF, Yu HCJ, So TH, Vardhanabhuti V. Current landscape and potential future applications of artificial intelligence in medical physics and radiotherapy. Artif Intell Med Imaging 2021; 2:37-55. [DOI: 10.35711/aimi.v2.i2.37] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/22/2021] [Revised: 04/01/2021] [Accepted: 04/20/2021] [Indexed: 02/06/2023] Open
Abstract
Artificial intelligence (AI) has seen tremendous growth over the past decade and stands to disrupts the medical industry. In medicine, this has been applied in medical imaging and other digitised medical disciplines, but in more traditional fields like medical physics, the adoption of AI is still at an early stage. Though AI is anticipated to be better than human in certain tasks, with the rapid growth of AI, there is increasing concerns for its usage. The focus of this paper is on the current landscape and potential future applications of artificial intelligence in medical physics and radiotherapy. Topics on AI for image acquisition, image segmentation, treatment delivery, quality assurance and outcome prediction will be explored as well as the interaction between human and AI. This will give insights into how we should approach and use the technology for enhancing the quality of clinical practice.
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Affiliation(s)
- Wing-Yan Ip
- Department of Diagnostic Radiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China
| | - Fu-Ki Yeung
- Medical Physics and Research Department, The Hong Kong Sanitorium & Hospital, Hong Kong SAR, China and Department of Diagnostic Radiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China
| | - Shang-Peng Felix Yung
- Department of Diagnostic Radiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China
| | | | - Tsz-Him So
- Department of Clinical Oncology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China
| | - Varut Vardhanabhuti
- Department of Diagnostic Radiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China
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16
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Yakar M, Etiz D. Artificial intelligence in radiation oncology. Artif Intell Med Imaging 2021; 2:13-31. [DOI: 10.35711/aimi.v2.i2.13] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Revised: 03/30/2021] [Accepted: 04/20/2021] [Indexed: 02/06/2023] Open
Abstract
Artificial intelligence (AI) is a computer science that tries to mimic human-like intelligence in machines that use computer software and algorithms to perform specific tasks without direct human input. Machine learning (ML) is a subunit of AI that uses data-driven algorithms that learn to imitate human behavior based on a previous example or experience. Deep learning is an ML technique that uses deep neural networks to create a model. The growth and sharing of data, increasing computing power, and developments in AI have initiated a transformation in healthcare. Advances in radiation oncology have produced a significant amount of data that must be integrated with computed tomography imaging, dosimetry, and imaging performed before each fraction. Of the many algorithms used in radiation oncology, has advantages and limitations with different computational power requirements. The aim of this review is to summarize the radiotherapy (RT) process in workflow order by identifying specific areas in which quality and efficiency can be improved by ML. The RT stage is divided into seven stages: patient evaluation, simulation, contouring, planning, quality control, treatment application, and patient follow-up. A systematic evaluation of the applicability, limitations, and advantages of AI algorithms has been done for each stage.
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Affiliation(s)
- Melek Yakar
- Department of Radiation Oncology, Eskisehir Osmangazi University Faculty of Medicine, Eskisehir 26040, Turkey
- Center of Research and Application for Computer Aided Diagnosis and Treatment in Health, Eskisehir Osmangazi University, Eskisehir 26040, Turkey
| | - Durmus Etiz
- Department of Radiation Oncology, Eskisehir Osmangazi University Faculty of Medicine, Eskisehir 26040, Turkey
- Center of Research and Application for Computer Aided Diagnosis and Treatment in Health, Eskisehir Osmangazi University, Eskisehir 26040, Turkey
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17
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Tak N, Egrioglu E, Bas E, Yolcu U. An adaptive forecast combination approach based on meta intuitionistic fuzzy functions. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2021. [DOI: 10.3233/jifs-202021] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Intuitionistic meta fuzzy forecast combination functions are introduced in the paper. There are two challenges in the forecast combination literature, determining the optimum weights and the methods to combine. Although there are a few studies on determining the methods, there are numerous studies on determining the optimum weights of the forecasting methods. In this sense, the questions like “What methods should we choose in the combination?” and “What combination function or the weights should we choose for the methods” are handled in the proposed method. Thus, the first two contributions that the paper aims to propose are to obtain the optimum weights and the proper forecasting methods in combination functions by employing meta fuzzy functions (MFFs). MFFs are recently introduced for aggregating different methods on a specific topic. Although meta-analysis aims to combine the findings of different primary studies, MFFs aim to aggregate different methods based on their performances on a specific topic. Thus, forecasting is selected as the specific topic to propose a novel forecast combination approach inspired by MFFs in this study. Another contribution of the paper is to improve the performance of MFFs by employing intuitionistic fuzzy c-means. 14 meteorological datasets are used to evaluate the performance of the proposed method. Results showed that the proposed method can be a handy tool for dealing with forecasting problems. The outstanding performance of the proposed method is verified in terms of RMSE and MAPE.
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Affiliation(s)
- Nihat Tak
- Department of Econometrics, Kirklareli University, Kirklareli, Turkey
| | - Erol Egrioglu
- Department of Statistics, Giresun University, Giresun, Turkey
| | - Eren Bas
- Department of Statistics, Giresun University, Giresun, Turkey
| | - Ufuk Yolcu
- Department of Econometrics, Giresun University, Giresun, Turkey
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18
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Artificial Intelligence and the Medical Physicist: Welcome to the Machine. APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app11041691] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Artificial intelligence (AI) is a branch of computer science dedicated to giving machines or computers the ability to perform human-like cognitive functions, such as learning, problem-solving, and decision making. Since it is showing superior performance than well-trained human beings in many areas, such as image classification, object detection, speech recognition, and decision-making, AI is expected to change profoundly every area of science, including healthcare and the clinical application of physics to healthcare, referred to as medical physics. As a result, the Italian Association of Medical Physics (AIFM) has created the “AI for Medical Physics” (AI4MP) group with the aims of coordinating the efforts, facilitating the communication, and sharing of the knowledge on AI of the medical physicists (MPs) in Italy. The purpose of this review is to summarize the main applications of AI in medical physics, describe the skills of the MPs in research and clinical applications of AI, and define the major challenges of AI in healthcare.
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Saba T, Abunadi I, Shahzad MN, Khan AR. Machine learning techniques to detect and forecast the daily total COVID-19 infected and deaths cases under different lockdown types. Microsc Res Tech 2021; 84:1462-1474. [PMID: 33522669 PMCID: PMC8014446 DOI: 10.1002/jemt.23702] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 11/27/2020] [Accepted: 12/27/2020] [Indexed: 12/13/2022]
Abstract
COVID-19 has impacted the world in many ways, including loss of lives, economic downturn and social isolation. COVID-19 was emerged due to the SARS-CoV-2 that is highly infectious pandemic. Every country tried to control the COVID-19 spread by imposing different types of lockdowns. Therefore, there is an urgent need to forecast the daily confirmed infected cases and deaths in different types of lockdown to select the most appropriate lockdown strategies to control the intensity of this pandemic and reduce the burden in hospitals. Currently are imposed three types of lockdown (partial, herd, complete) in different countries. In this study, three countries from every type of lockdown were studied by applying time-series and machine learning models, named as random forests, K-nearest neighbors, SVM, decision trees (DTs), polynomial regression, Holt winter, ARIMA, and SARIMA to forecast daily confirm infected cases and deaths due to COVID-19. The models' accuracy and effectiveness were evaluated by error based on three performance criteria. Actually, a single forecasting model could not capture all data sets' trends due to the varying nature of data sets and lockdown types. Three top-ranked models were used to predict the confirmed infected cases and deaths, the outperformed models were also adopted for the out-of-sample prediction and obtained very close results to the actual values of cumulative infected cases and deaths due to COVID-19. This study has proposed the auspicious models for forecasting and the best lockdown strategy to mitigate the causalities of COVID-19.
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Affiliation(s)
- Tanzila Saba
- Artificial Intelligence and Data Analytics Lab, CCIS Prince Sultan University, Riyadh, Saudi Arabia
| | - Ibrahim Abunadi
- Artificial Intelligence and Data Analytics Lab, CCIS Prince Sultan University, Riyadh, Saudi Arabia
| | | | - Amjad Rehman Khan
- Artificial Intelligence and Data Analytics Lab, CCIS Prince Sultan University, Riyadh, Saudi Arabia
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20
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Tian X, Li C, Liu H, Li P, He J, Gao W. Applications of artificial intelligence in radiophysics. J Cancer Res Ther 2021; 17:1603-1607. [DOI: 10.4103/jcrt.jcrt_1438_21] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
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21
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Shi C, Chen Q, Yu F, Zhang J, Kang M, Tang S, Chang C, Lin H. Auto-Trending daily quality assurance program for a pencil beam scanning proton system aligned with TG 224. J Appl Clin Med Phys 2021; 22:117-127. [PMID: 33338293 PMCID: PMC7856486 DOI: 10.1002/acm2.13117] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2020] [Revised: 10/06/2020] [Accepted: 11/13/2020] [Indexed: 01/26/2023] Open
Abstract
The Daily Quality Assurance (DQA) for a proton modality is not standardized. The modern pencil beam scanning proton system is becoming a trend and an increasing number of proton centers with PBS are either under construction or in planning. The American Association of Physicists in Medicine has a Task Group 224 report published in 2019 for proton modality routine QA. Therefore, there is a clinical need to explore a DQA procedure to meet the TG 224 guideline. The MatriXX PT and a customized phantom were used for the dosimetry constancy checking. An OBI box was used for imaging QA. The MyQA(TM) software was used for logging the dosimetry results. An in-house developed application was applied to log and auto analyze the DQA results. Another in-house developed program "DailyQATrend" was used to create DQA databases for further analysis. All the functional and easy determined tasks passed. For dosimetry constancy checking, the outputs for four gantry rooms were within ±3% with room to room baseline differences within ±1%. The energy checking was within ±1%. The spot location checking from the baseline was within 0.63 mm and the spot size checking from the baseline was within -1.41 ± 1.27 mm (left-right) and -0.24 ± 1.27 mm (in-out) by averaging all the energies. We have found that there was also a trend for the beam energies of two treatment rooms slowly going down (0.76% per month and 0.48 per month) after analyzing the whole data trend with linear regression. A DQA program for a PBS proton system has been developed and fully implemented into the clinic. The DQA program meets the TG 224 guideline and has web-based logging and auto treading functions. The clinical data show the DQA program is efficient and has the potential to identify the PBS proton system potential issue.
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Affiliation(s)
| | | | | | | | | | | | - Chang Chang
- California Protons Cancer Therapy CenterSan DiegoCAUSA
- Department of Radiation Medicine and Applied SciencesUniversity of CaliforniaSan Diego
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22
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Gujral H, Kushwaha AK, Khurana S. Utilization of Time Series Tools in Life-sciences and Neuroscience. Neurosci Insights 2020; 15:2633105520963045. [PMID: 33345189 PMCID: PMC7727047 DOI: 10.1177/2633105520963045] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Accepted: 09/11/2020] [Indexed: 01/18/2023] Open
Abstract
Time series tools are part and parcel of modern day research. Their usage in the biomedical field; specifically, in neuroscience, has not been previously quantified. A quantification of trends can tell about lacunae in the current uses and point towards future uses. We evaluated the principles and applications of few classical time series tools, such as Principal Component Analysis, Neural Networks, common Auto-regression Models, Markov Models, Hidden Markov Models, Fourier Analysis, Spectral Analysis, in addition to diverse work, generically lumped under time series category. We quantified the usage from two perspectives, one, information technology professionals', other, researchers utilizing these tools for biomedical and neuroscience research. For understanding trends from the information technology perspective, we evaluated two of the largest open source question and answer databases of Stack Overflow and Cross Validated. We quantified the trends in their application in the biomedical domain, and specifically neuroscience, by searching literature and application usage on PubMed. While the use of all the time series tools continues to gain popularity in general biomedical and life science research, and also neuroscience, and so have been the total number of questions asked on Stack overflow and Cross Validated, the total views to questions on these are on a decrease in recent years, indicating well established texts, algorithms, and libraries, resulting in engineers not looking for what used to be common questions a few years back. The use of these tools in neuroscience clearly leaves room for improvement.
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Affiliation(s)
- Harshit Gujral
- Department of Computer Science and Information Technology, Jaypee Institute of Information Technology, Noida, India
| | - Ajay Kumar Kushwaha
- Department of Computer Science and Information Technology, Jaypee Institute of Information Technology, Noida, India
| | - Sukant Khurana
- CSIR-Central Drug Research Institute, Lucknow, Uttar Pradesh, India
- CSIR-Institute of Genomics and Integrative Biology, India
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23
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Chan MF, Witztum A, Valdes G. Integration of AI and Machine Learning in Radiotherapy QA. Front Artif Intell 2020; 3:577620. [PMID: 33733216 PMCID: PMC7861232 DOI: 10.3389/frai.2020.577620] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Accepted: 08/24/2020] [Indexed: 12/11/2022] Open
Abstract
The use of machine learning and other sophisticated models to aid in prediction and decision making has become widely popular across a breadth of disciplines. Within the greater diagnostic radiology, radiation oncology, and medical physics communities promising work is being performed in tissue classification and cancer staging, outcome prediction, automated segmentation, treatment planning, and quality assurance as well as other areas. In this article, machine learning approaches are explored, highlighting specific applications in machine and patient-specific quality assurance (QA). Machine learning can analyze multiple elements of a delivery system on its performance over time including the multileaf collimator (MLC), imaging system, mechanical and dosimetric parameters. Virtual Intensity-Modulated Radiation Therapy (IMRT) QA can predict passing rates using different measurement techniques, different treatment planning systems, and different treatment delivery machines across multiple institutions. Prediction of QA passing rates and other metrics can have profound implications on the current IMRT process. Here we cover general concepts of machine learning in dosimetry and various methods used in virtual IMRT QA, as well as their clinical applications.
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Affiliation(s)
- Maria F Chan
- Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY, United States
| | - Alon Witztum
- Department of Radiation Oncology, University of California, San Francisco, San Francisco, CA, United States
| | - Gilmer Valdes
- Department of Radiation Oncology, University of California, San Francisco, San Francisco, CA, United States
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24
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Overview of artificial intelligence-based applications in radiotherapy: Recommendations for implementation and quality assurance. Radiother Oncol 2020; 153:55-66. [PMID: 32920005 DOI: 10.1016/j.radonc.2020.09.008] [Citation(s) in RCA: 159] [Impact Index Per Article: 39.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Revised: 09/02/2020] [Accepted: 09/03/2020] [Indexed: 02/06/2023]
Abstract
Artificial Intelligence (AI) is currently being introduced into different domains, including medicine. Specifically in radiation oncology, machine learning models allow automation and optimization of the workflow. A lack of knowledge and interpretation of these AI models can hold back wide-spread and full deployment into clinical practice. To facilitate the integration of AI models in the radiotherapy workflow, generally applicable recommendations on implementation and quality assurance (QA) of AI models are presented. For commonly used applications in radiotherapy such as auto-segmentation, automated treatment planning and synthetic computed tomography (sCT) the basic concepts are discussed in depth. Emphasis is put on the commissioning, implementation and case-specific and routine QA of AI models needed for a methodical introduction in clinical practice.
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Abstract
Artificial intelligence (AI) has the potential to fundamentally alter the way medicine is practised. AI platforms excel in recognizing complex patterns in medical data and provide a quantitative, rather than purely qualitative, assessment of clinical conditions. Accordingly, AI could have particularly transformative applications in radiation oncology given the multifaceted and highly technical nature of this field of medicine with a heavy reliance on digital data processing and computer software. Indeed, AI has the potential to improve the accuracy, precision, efficiency and overall quality of radiation therapy for patients with cancer. In this Perspective, we first provide a general description of AI methods, followed by a high-level overview of the radiation therapy workflow with discussion of the implications that AI is likely to have on each step of this process. Finally, we describe the challenges associated with the clinical development and implementation of AI platforms in radiation oncology and provide our perspective on how these platforms might change the roles of radiotherapy medical professionals.
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26
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Góngora DM, Van Caneghem J, Haeseldonckx D, Leyva EG, Mendoza MR, Dutta A. Post-combustion artificial neural network modeling of nickel-producing multiple hearth furnace. INTERNATIONAL JOURNAL OF CHEMICAL REACTOR ENGINEERING 2020. [DOI: 10.1515/ijcre-2019-0191] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
AbstractIn a nickel-producing multiple hearth furnace, there is a problem associated to the automatic operation of the temperature control loops in two of the hearths, since the same flow of air is split into two branches. A neural model of the post-combustion sub-process is built and served to increase the process efficiency of the industrial furnace. Data was taken for a three-months operating time period to identify the main variables characterizing the process and a model of multilayer perceptron type is built. For the validation of this model, process data from a four-months operating time period in 2018 was used and prediction errors based on a measure of closeness in terms of a mean square error criterion measured through its weights for the temperature of two of the hearths (four and six) versus the air flow to these hearths. Based on a rigorous testing and analysis of the process, the model is capable of predicting the temperature of hearth four and six with errors of 0.6 and 0.3 °C, respectively. In addition, the emissions by high concentration of carbon monoxide in the exhaust gases are reduced, thus contributing to the health of the ecosystem.
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Affiliation(s)
| | - Jo Van Caneghem
- KU Leuven, Campus Groep T, Andreas Vesaliusstraat 13, 3000, Leuven, Belgium
| | - Dries Haeseldonckx
- KU Leuven, Campus Groep T, Andreas Vesaliusstraat 13, 3000, Leuven, Belgium
| | | | | | - Abhishek Dutta
- KU Leuven, Campus Groep T, Andreas Vesaliusstraat 13, 3000, Leuven, Belgium
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27
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Puyati W, Khawne A, Barnes M, Zwan B, Greer P, Fuangrod T. Predictive quality assurance of a linear accelerator based on the machine performance check application using statistical process control and ARIMA forecast modeling. J Appl Clin Med Phys 2020; 21:73-82. [PMID: 32543097 PMCID: PMC7484849 DOI: 10.1002/acm2.12917] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2019] [Revised: 12/04/2019] [Accepted: 04/21/2020] [Indexed: 12/16/2022] Open
Abstract
Purpose A predictive linac quality assurance system based on the output of the Machine Performance Check (MPC) application was developed using statistical process control and autoregressive integrated moving average forecast modeling. The aim of this study is to demonstrate the feasibility of predictive quality assurance based on MPC tests that allow proactive preventative maintenance procedures to be carried out to better ensure optimal linac performance and minimize downtime. Method and Materials Daily MPC data were acquired for a total of 490 measurements. The initial 85% of data were used in prediction model learning with the autoregressive integrated moving average technique and in calculating upper and lower control limits for statistical process control analysis. The remaining 15% of data were used in testing the accuracy of the predictions of the proposed system. Two types of prediction were studied, namely, one‐step‐ahead values for predicting the next day's quality assurance results and six‐step‐ahead values for predicting up to a week ahead. Results that fall within the upper and lower control limits indicate a normal stage of machine performance, while the tolerance, determined from AAPM TG‐142, is the clinically required performance. The gap between the control limits and the clinical tolerances (as the warning stage) provides a window of opportunity for rectifying linac performance issues before they become clinically significant. The accuracy of the predictive model was tested using the root‐mean‐square error, absolute error, and average accuracy rate for all MPC test parameters. Results The accuracy of the predictive model is considered high (average root‐mean‐square error and absolute error for all parameters of less than 0.05). The average accuracy rate for indicating the normal/warning stages was higher than 85.00%. Conclusion Predictive quality assurance with the MPC will allow preventative maintenance, which could lead to improved linac performance and a reduction in unscheduled linac downtime.
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Affiliation(s)
- Wayo Puyati
- Department of Computer Engineering, Faculty of Engineering, King Mongkut's Institute of Technology Ladkrabang, Bangkok, 10520, Thailand.,Department of Mathematics Statistics and Computer, Faculty of Science, Ubon Ratchathani University, Ubon Ratchathani, 34190, Thailand
| | - Amnach Khawne
- Department of Computer Engineering, Faculty of Engineering, King Mongkut's Institute of Technology Ladkrabang, Bangkok, 10520, Thailand
| | - Michael Barnes
- Department of Radiation Oncology, Calvary Mater Hospital Newcastle, NSW, 2298, Australia.,School of Mathematical and Physical Sciences, University of Newcastle, Newcastle, NSW, 2308, Australia
| | - Benjamin Zwan
- School of Mathematical and Physical Sciences, University of Newcastle, Newcastle, NSW, 2308, Australia.,Central Coast Cancer Centre, Gosford Hospital, Gosford, NSW, 2250, Australia
| | - Peter Greer
- Department of Radiation Oncology, Calvary Mater Hospital Newcastle, NSW, 2298, Australia.,School of Mathematical and Physical Sciences, University of Newcastle, Newcastle, NSW, 2308, Australia
| | - Todsaporn Fuangrod
- Faculty of Medicine and Public Health, HRH Princess Chulabhorn College of Medical Science, Chulabhorn Royal Academy, Bangkok, 10210, Thailand
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28
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AKÇAY M, ETİZ D. Radyasyon Onkolojisinde Makine Öğrenmesi. OSMANGAZİ JOURNAL OF MEDICINE 2020. [DOI: 10.20515/otd.691331] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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El Naqa I, Haider MA, Giger ML, Ten Haken RK. Artificial Intelligence: reshaping the practice of radiological sciences in the 21st century. Br J Radiol 2020; 93:20190855. [PMID: 31965813 PMCID: PMC7055429 DOI: 10.1259/bjr.20190855] [Citation(s) in RCA: 47] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2019] [Revised: 01/12/2020] [Accepted: 01/13/2020] [Indexed: 12/15/2022] Open
Abstract
Advances in computing hardware and software platforms have led to the recent resurgence in artificial intelligence (AI) touching almost every aspect of our daily lives by its capability for automating complex tasks or providing superior predictive analytics. AI applications are currently spanning many diverse fields from economics to entertainment, to manufacturing, as well as medicine. Since modern AI's inception decades ago, practitioners in radiological sciences have been pioneering its development and implementation in medicine, particularly in areas related to diagnostic imaging and therapy. In this anniversary article, we embark on a journey to reflect on the learned lessons from past AI's chequered history. We further summarize the current status of AI in radiological sciences, highlighting, with examples, its impressive achievements and effect on re-shaping the practice of medical imaging and radiotherapy in the areas of computer-aided detection, diagnosis, prognosis, and decision support. Moving beyond the commercial hype of AI into reality, we discuss the current challenges to overcome, for AI to achieve its promised hope of providing better precision healthcare for each patient while reducing cost burden on their families and the society at large.
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Affiliation(s)
- Issam El Naqa
- Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA
| | - Masoom A Haider
- Department of Medical Imaging and Lunenfeld-Tanenbaum Research Institute, University of Toronto, Toronto, ON, Canada
| | | | - Randall K Ten Haken
- Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA
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Malone C, Fennell L, Folliard T, Kelly C. Using a neural network to predict deviations in mean heart dose during the treatment of left-sided deep inspiration breath hold patients. Phys Med 2019; 65:137-142. [PMID: 31465979 DOI: 10.1016/j.ejmp.2019.08.014] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/22/2018] [Revised: 08/10/2019] [Accepted: 08/15/2019] [Indexed: 12/30/2022] Open
Abstract
PURPOSE We investigated if a neural network could be used to predict the change in mean heart dose when a patient's heart deviates from its planned position during radiotherapy treatment. METHODS Predictions were made based on parameters available at the time of treatment planning. The dose prescription, deep inspiration breath-hold (DIBH) amplitude, heart volume, lung volume, V90% and mean heart dose were used to predict the increase in dose to the heart when a shift towards the treatment field was undertaken. The network was trained using 3 mm, 5 mm and 7 mm shifts in heart positions for 50 patients' giving 150 data points in total. The neural network architecture was also varied to find the most optimal network design. The final neural network was then tested using cross-validation to evaluate the model's ability to generalise to new data. RESULTS The optimal neural network found was comprised of a single hidden layer of 30 neurons. Based on twenty train/test splits, 94% of all prediction errors were below 0.2 Gy, 97.3% were below 0.3 Gy and 100% were below 0.5 Gy. The average RMSE and maximum prediction error over all train/test splits were 0.13 Gy and 0.5 Gy respectively. CONCLUSIONS Our approach using a neural network provides a clinically acceptable estimate of the increase in Mean Heart Dose (MHD), without the need for further imaging, contouring or evaluation. The trained neural network gives clinicians the information and tools required to evaluate what shift in heart position would be acceptable and which scenarios require immediate action before treatment continues.
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Affiliation(s)
| | | | | | - Colin Kelly
- St. Luke's Radiation Oncology Network, Ireland.
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El Naqa I, Irrer J, Ritter TA, DeMarco J, Al‐Hallaq H, Booth J, Kim G, Alkhatib A, Popple R, Perez M, Farrey K, Moran JM. Machine learning for automated quality assurance in radiotherapy: A proof of principle using
EPID
data description. Med Phys 2019; 46:1914-1921. [DOI: 10.1002/mp.13433] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2018] [Revised: 01/02/2019] [Accepted: 01/30/2019] [Indexed: 11/07/2022] Open
Affiliation(s)
- Issam El Naqa
- Department of Radiation Oncology University of Michigan Ann Arbor MI 48103 USA
| | - Jim Irrer
- Department of Radiation Oncology University of Michigan Ann Arbor MI 48103 USA
| | - Tim A. Ritter
- Department of Radiation Oncology Virginia Commonwealth University Richmond VA 23298 USA
| | - John DeMarco
- Department of Radiation Oncology Cedars‐Sinai Medical Center Los Angeles California 90048 USA
| | - Hania Al‐Hallaq
- University of Chicago Radiation and Cellular Oncology Chicago IL 60637 USA
| | - Jeremy Booth
- Royal North Shore Hospital St Leonards New South Wales 2065 Australia
| | - Grace Kim
- University of California at San Diego San Diego CA 92093 USA
| | - Ahmad Alkhatib
- Karmanos Cancer Institute McLaren‐Flint Flint MI 48532 USA
| | - Richard Popple
- University of Alabama at Birmingham Birmingham AL 35249 USA
| | - Mario Perez
- Royal North Shore Hospital St Leonards New South Wales 2065 Australia
| | - Karl Farrey
- University of Chicago Radiation and Cellular Oncology Chicago IL 60637 USA
| | - Jean M. Moran
- Department of Radiation Oncology University of Michigan Ann Arbor MI 48103 USA
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El Naqa I, Ruan D, Valdes G, Dekker A, McNutt T, Ge Y, Wu QJ, Oh JH, Thor M, Smith W, Rao A, Fuller C, Xiao Y, Manion F, Schipper M, Mayo C, Moran JM, Ten Haken R. Machine learning and modeling: Data, validation, communication challenges. Med Phys 2018; 45:e834-e840. [PMID: 30144098 DOI: 10.1002/mp.12811] [Citation(s) in RCA: 49] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2017] [Revised: 12/28/2017] [Accepted: 01/22/2018] [Indexed: 11/06/2022] Open
Abstract
With the era of big data, the utilization of machine learning algorithms in radiation oncology is rapidly growing with applications including: treatment response modeling, treatment planning, contouring, organ segmentation, image-guidance, motion tracking, quality assurance, and more. Despite this interest, practical clinical implementation of machine learning as part of the day-to-day clinical operations is still lagging. The aim of this white paper is to further promote progress in this new field of machine learning in radiation oncology by highlighting its untapped advantages and potentials for clinical advancement, while also presenting current challenges and open questions for future research. The targeted audience of this paper includes newcomers as well as practitioners in the field of medical physics/radiation oncology. The paper also provides general recommendations to avoid common pitfalls when applying these powerful data analytic tools to medical physics and radiation oncology problems and suggests some guidelines for transparent and informative reporting of machine learning results.
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Affiliation(s)
- Issam El Naqa
- Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA
| | - Dan Ruan
- Department of Radiation Oncology, University of California Los Angeles, Los Angeles, CA, USA
| | - Gilmer Valdes
- Department of Radiation Oncology, University of California Los San Francisco, San Francisco, CA, USA
| | - Andre Dekker
- GROW-School for Oncology and Developmental Biology, Department of Radiation Oncology (MAASTRO), Maastricht University Medical Center, Maastricht, The Netherlands
| | - Todd McNutt
- Department of Radiation Oncology, John Hopkins University, Baltimore, MD, USA
| | - Yaorong Ge
- Department of Software and Information Systems, University of North Carolina, Charlotte, NC, USA
| | - Q Jackie Wu
- Department of Radiation Oncology, Duke University Medical Center, Durham, NC, USA
| | - Jung Hun Oh
- Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY, USA
| | - Maria Thor
- Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY, USA
| | - Wade Smith
- Department of Radiation Oncology, University of Washington, Seattle, WA, USA
| | - Arvind Rao
- Department of Radiation Oncology, MD Anderson, Houston, TX, USA.,Department of Bioinformatics and Computational Biology, MD Anderson, Houston, TX, USA
| | - Clifton Fuller
- Department of Radiation Oncology, MD Anderson, Houston, TX, USA
| | - Ying Xiao
- Department of Radiation Oncology, University of Pennsylvania, Philadelphia, PA, USA
| | - Frank Manion
- Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA
| | - Matthew Schipper
- Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA
| | - Charles Mayo
- Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA
| | - Jean M Moran
- Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA
| | - Randall Ten Haken
- Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA
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Thompson RF, Valdes G, Fuller CD, Carpenter CM, Morin O, Aneja S, Lindsay WD, Aerts HJWL, Agrimson B, Deville C, Rosenthal SA, Yu JB, Thomas CR. Artificial intelligence in radiation oncology: A specialty-wide disruptive transformation? Radiother Oncol 2018; 129:421-426. [PMID: 29907338 DOI: 10.1016/j.radonc.2018.05.030] [Citation(s) in RCA: 131] [Impact Index Per Article: 21.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2018] [Revised: 05/29/2018] [Accepted: 05/30/2018] [Indexed: 12/16/2022]
Abstract
Artificial intelligence (AI) is emerging as a technology with the power to transform established industries, and with applications from automated manufacturing to advertising and facial recognition to fully autonomous transportation. Advances in each of these domains have led some to call AI the "fourth" industrial revolution [1]. In healthcare, AI is emerging as both a productive and disruptive force across many disciplines. This is perhaps most evident in Diagnostic Radiology and Pathology, specialties largely built around the processing and complex interpretation of medical images, where the role of AI is increasingly seen as both a boon and a threat. In Radiation Oncology as well, AI seems poised to reshape the specialty in significant ways, though the impact of AI has been relatively limited at present, and may rightly seem more distant to many, given the predominantly interpersonal and complex interventional nature of the specialty. In this overview, we will explore the current state and anticipated future impact of AI on Radiation Oncology, in detail, focusing on key topics from multiple stakeholder perspectives, as well as the role our specialty may play in helping to shape the future of AI within the larger spectrum of medicine.
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Affiliation(s)
- Reid F Thompson
- Oregon Health & Science University, Portland, USA; VA Portland Health Care System, Portland, USA.
| | - Gilmer Valdes
- University of California San Francisco, San Francisco, USA
| | | | | | - Olivier Morin
- University of California San Francisco, San Francisco, USA
| | | | | | - Hugo J W L Aerts
- Brigham and Women's Hospital, Boston, USA; Dana Farber Cancer Institute, Boston, USA
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Interian Y, Rideout V, Kearney VP, Gennatas E, Morin O, Cheung J, Solberg T, Valdes G. Deep nets vs expert designed features in medical physics: An IMRT QA case study. Med Phys 2018; 45:2672-2680. [PMID: 29603278 DOI: 10.1002/mp.12890] [Citation(s) in RCA: 87] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2017] [Revised: 01/09/2018] [Accepted: 01/09/2018] [Indexed: 11/12/2022] Open
Abstract
PURPOSE The purpose of this study was to compare the performance of Deep Neural Networks against a technique designed by domain experts in the prediction of gamma passing rates for Intensity Modulated Radiation Therapy Quality Assurance (IMRT QA). METHOD A total of 498 IMRT plans across all treatment sites were planned in Eclipse version 11 and delivered using a dynamic sliding window technique on Clinac iX or TrueBeam Linacs. Measurements were performed using a commercial 2D diode array, and passing rates for 3%/3 mm local dose/distance-to-agreement (DTA) were recorded. Separately, fluence maps calculated for each plan were used as inputs to a convolution neural network (CNN). The CNNs were trained to predict IMRT QA gamma passing rates using TensorFlow and Keras. A set of model architectures, inspired by the convolutional blocks of the VGG-16 ImageNet model, were constructed and implemented. Synthetic data, created by rotating and translating the fluence maps during training, was created to boost the performance of the CNNs. Dropout, batch normalization, and data augmentation were utilized to help train the model. The performance of the CNNs was compared to a generalized Poisson regression model, previously developed for this application, which used 78 expert designed features. RESULTS Deep Neural Networks without domain knowledge achieved comparable performance to a baseline system designed by domain experts in the prediction of 3%/3 mm Local gamma passing rates. An ensemble of neural nets resulted in a mean absolute error (MAE) of 0.70 ± 0.05 and the domain expert model resulted in a 0.74 ± 0.06. CONCLUSIONS Convolutional neural networks (CNNs) with transfer learning can predict IMRT QA passing rates by automatically designing features from the fluence maps without human expert supervision. Predictions from CNNs are comparable to a system carefully designed by physicist experts.
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Affiliation(s)
- Yannet Interian
- MS in Analytics Program, University of San Francisco, San Francisco, CA, USA
| | - Vincent Rideout
- MS in Analytics Program, University of San Francisco, San Francisco, CA, USA
| | - Vasant P Kearney
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA
| | - Efstathios Gennatas
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA
| | - Olivier Morin
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA
| | - Joey Cheung
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA
| | - Timothy Solberg
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA
| | - Gilmer Valdes
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA
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Feng M, Valdes G, Dixit N, Solberg TD. Machine Learning in Radiation Oncology: Opportunities, Requirements, and Needs. Front Oncol 2018; 8:110. [PMID: 29719815 PMCID: PMC5913324 DOI: 10.3389/fonc.2018.00110] [Citation(s) in RCA: 64] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Accepted: 03/29/2018] [Indexed: 12/14/2022] Open
Abstract
Machine learning (ML) has the potential to revolutionize the field of radiation oncology, but there is much work to be done. In this article, we approach the radiotherapy process from a workflow perspective, identifying specific areas where a data-centric approach using ML could improve the quality and efficiency of patient care. We highlight areas where ML has already been used, and identify areas where we should invest additional resources. We believe that this article can serve as a guide for both clinicians and researchers to start discussing issues that must be addressed in a timely manner.
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Affiliation(s)
- Mary Feng
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, United States
| | - Gilmer Valdes
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, United States
| | - Nayha Dixit
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, United States
| | - Timothy D Solberg
- Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, United States
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36
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Valdes G, Simone CB, Chen J, Lin A, Yom SS, Pattison AJ, Carpenter CM, Solberg TD. Clinical decision support of radiotherapy treatment planning: A data-driven machine learning strategy for patient-specific dosimetric decision making. Radiother Oncol 2017; 125:392-397. [PMID: 29162279 DOI: 10.1016/j.radonc.2017.10.014] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2017] [Revised: 10/10/2017] [Accepted: 10/10/2017] [Indexed: 02/06/2023]
Abstract
BACKGROUND AND PURPOSE Clinical decision support systems are a growing class of tools with the potential to impact healthcare. This study investigates the construction of a decision support system through which clinicians can efficiently identify which previously approved historical treatment plans are achievable for a new patient to aid in selection of therapy. MATERIAL AND METHODS Treatment data were collected for early-stage lung and postoperative oropharyngeal cancers treated using photon (lung and head and neck) and proton (head and neck) radiotherapy. Machine-learning classifiers were constructed using patient-specific feature-sets and a library of historical plans. Model accuracy was analyzed using learning curves, and historical treatment plan matching was investigated. RESULTS Learning curves demonstrate that for these datasets, approximately 45, 60, and 30 patients are needed for a sufficiently accurate classification model for radiotherapy for early-stage lung, postoperative oropharyngeal photon, and postoperative oropharyngeal proton, respectively. The resulting classification model provides a database of previously approved treatment plans that are achievable for a new patient. An exemplary case, highlighting tradeoffs between the heart and chest wall dose while holding target dose constant in two historical plans is provided. CONCLUSIONS We report on the first artificial-intelligence based clinical decision support system that connects patients to past discrete treatment plans in radiation oncology and demonstrate for the first time how this tool can enable clinicians to use past decisions to help inform current assessments. Clinicians can be informed of dose tradeoffs between critical structures early in the treatment process, enabling more time spent on finding the optimal course of treatment for individual patients.
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Affiliation(s)
- Gilmer Valdes
- Department of Radiation Oncology, University of California, San Francisco, United States.
| | | | - Josephine Chen
- Department of Radiation Oncology, University of California, San Francisco, United States
| | - Alexander Lin
- Department of Radiation Oncology, University of Pennsylvania, Philadelphia, United States
| | - Sue S Yom
- Department of Radiation Oncology, University of California, San Francisco, United States; Department of Otolaryngology-Head and Neck Surgery, San Francisco, United States
| | | | | | - Timothy D Solberg
- Department of Radiation Oncology, University of California, San Francisco, United States
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Valdes G, Chan MF, Lim SB, Scheuermann R, Deasy JO, Solberg TD. IMRT QA using machine learning: A multi-institutional validation. J Appl Clin Med Phys 2017; 18:279-284. [PMID: 28815994 PMCID: PMC5874948 DOI: 10.1002/acm2.12161] [Citation(s) in RCA: 93] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2017] [Revised: 06/30/2017] [Accepted: 07/10/2017] [Indexed: 02/04/2023] Open
Abstract
Purpose To validate a machine learning approach to Virtual intensity‐modulated radiation therapy (IMRT) quality assurance (QA) for accurately predicting gamma passing rates using different measurement approaches at different institutions. Methods A Virtual IMRT QA framework was previously developed using a machine learning algorithm based on 498 IMRT plans, in which QA measurements were performed using diode‐array detectors and a 3%local/3 mm with 10% threshold at Institution 1. An independent set of 139 IMRT measurements from a different institution, Institution 2, with QA data based on portal dosimetry using the same gamma index, was used to test the mathematical framework. Only pixels with ≥10% of the maximum calibrated units (CU) or dose were included in the comparison. Plans were characterized by 90 different complexity metrics. A weighted poison regression with Lasso regularization was trained to predict passing rates using the complexity metrics as input. Results The methodology predicted passing rates within 3% accuracy for all composite plans measured using diode‐array detectors at Institution 1, and within 3.5% for 120 of 139 plans using portal dosimetry measurements performed on a per‐beam basis at Institution 2. The remaining measurements (19) had large areas of low CU, where portal dosimetry has a larger disagreement with the calculated dose and as such, the failure was expected. These beams need further modeling in the treatment planning system to correct the under‐response in low‐dose regions. Important features selected by Lasso to predict gamma passing rates were as follows: complete irradiated area outline (CIAO), jaw position, fraction of MLC leafs with gaps smaller than 20 or 5 mm, fraction of area receiving less than 50% of the total CU, fraction of the area receiving dose from penumbra, weighted average irregularity factor, and duty cycle. Conclusions We have demonstrated that Virtual IMRT QA can predict passing rates using different measurement techniques and across multiple institutions. Prediction of QA passing rates can have profound implications on the current IMRT process.
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Affiliation(s)
- Gilmer Valdes
- Department of Radiation Oncology, University of California San Francisco Medical Center, San Francisco, CA, USA.,Department of Radiation Oncology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
| | - Maria F Chan
- Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY, USA
| | - Seng Boh Lim
- Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY, USA
| | - Ryan Scheuermann
- Department of Radiation Oncology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
| | - Joseph O Deasy
- Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY, USA
| | - Timothy D Solberg
- Department of Radiation Oncology, University of California San Francisco Medical Center, San Francisco, CA, USA.,Department of Radiation Oncology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
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Adam NR, Wieder R, Ghosh D. Data science, learning, and applications to biomedical and health sciences. Ann N Y Acad Sci 2017; 1387:5-11. [DOI: 10.1111/nyas.13309] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2016] [Accepted: 12/13/2016] [Indexed: 12/25/2022]
Affiliation(s)
- Nabil R. Adam
- Rutgers University Institute for Data Science; Learning, and Applications; Newark New Jersey
| | - Robert Wieder
- Rutgers University Biomedical and Health Sciences; Newark New Jersey
| | - Debopriya Ghosh
- Rutgers University Institute for Data Science; Learning, and Applications; Newark New Jersey
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