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Su Y, Fu F, Ou X, Gong L, Liu H, Sun Y. Response of selenium pools to drought stress by regulating physio‑biochemical attributes and anatomical changes in Gentiana macrophylla. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2024; 280:116591. [PMID: 38875819 DOI: 10.1016/j.ecoenv.2024.116591] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Revised: 06/08/2024] [Accepted: 06/11/2024] [Indexed: 06/16/2024]
Abstract
Selenium (Se), as a vital stress ameliorant, possesses a beneficial effect on mediating detrimental effects of environmental threats. However, the mechanisms of Se in mitigating the deleterious effects of drought are still poorly understood. Gentiana macrophylla Pall. is a well-known Chinese medicinal herb, and its root, as the main medicinal site, has significant therapeutic effects. The purpose of this experiment was to investigate the functions of Se on the seedling growth and physiobiochemical characteristics in G. macrophylla subjected to drought stress. The changes in microstructure and chloroplast ultrastructure of G. macrophylla leaves under drought exposure were characterized by scanning electron microscopy (SEM), scanning electron microscopes and energy dispersive X-Ray spectroscope (SEM-EDX), and transmission electron microscopy (TEM), respectively. Results revealed that drought stress induced a notable increase in oxidative toxicity in G. macrophylla, as evidenced by elevated levels of hydrogen peroxide (H2O2), lipid peroxidation (MDA), enhanced antioxidative response, decreased plant photosynthetic function, and inhibited plant growth. Chloroplasts integrity with damaged membranes and excess osmiophilic granule were observed in the drought-stressed plants. Se supplementation notably recovered the stomatal morphology, anatomical structure damage, and chloroplast ultrastructure of G. macrophylla leaves caused by drought exposure. Exogenous Se application markedly enhanced SPAD, photosynthetic stomatal exchange parameters, and photosystem II activity. Se supplementation significantly promoted the activities of superoxide dismutase (SOD), ascorbate peroxidase (APX), and catalase (CAT), while reducing levels of MDA, superoxide anion (O2-.) and H2O2, and improving membrane integrity. Furthermore, the ameliorative effects of Se were also suggested by increased contents of osmotic substances (soluble sugar and proline), boosted content of gentiopicroside and loganinic acid in roots, and alleviated the inhibition in plant growth and biomass. Fourier transform infrared (FTIR) analysis of Se-treated G. macrophylla roots under drought stress demonstrated that Se-stimulated metabolites including O-H, C-H, N-H, C-N, and CO functional groups, were involved in resisting drought stress. Correlation analysis indicated an obvious negative correlation between growth parameters and MDA, O2-. and H2O2 content, while a positive correlation with photosynthetic gas exchange parameters. Principal component analysis (PCA) results explained the total variance into two principal components contributing the maximum (93.50 %) among the drought exposure with or without Se due to the various experiment indexes. In conclusion, Se exerts beneficial properties on drought-induced detrimental effects in G. macrophylla by relieving oxidative stress, improving photosynthesis indexes, PSII activity, regulating anatomical changes, altering levels of gentiopicroside and loganinic acid, and promoting growth of drought-stressed G. macrophylla.
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Affiliation(s)
- Yunyun Su
- School of Agriculture and Bioengineering, Longdong University, Qingyang 745000, China.
| | - Feifei Fu
- Clinical college of Chinese Medicine, Gansu University of Chinese Medicine, Lanzhou 730000, China
| | - Xiaobin Ou
- School of Agriculture and Bioengineering, Longdong University, Qingyang 745000, China
| | - Lei Gong
- School of Agriculture and Bioengineering, Longdong University, Qingyang 745000, China
| | - Haiqing Liu
- School of Agriculture and Bioengineering, Longdong University, Qingyang 745000, China
| | - Yubu Sun
- School of Agriculture and Bioengineering, Longdong University, Qingyang 745000, China
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Zaman W, Lee EM, Park S. Endemic species analysis: Foliar epidermal anatomical characters of Aster glehnii F. Schmidt (Asteraceae). Microsc Res Tech 2024; 87:1640-1646. [PMID: 38450874 DOI: 10.1002/jemt.24547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2023] [Revised: 01/30/2024] [Accepted: 02/26/2024] [Indexed: 03/08/2024]
Abstract
The classification and identification of Aster glehnii F. Schmidt are determined from its foliar epidermal anatomical features. Scanning electronic microscopy has been used to determine the foliar epidermal anatomical characteristics of the species in detail. This study compared the qualitative and quantitative characteristics of the leaf epidermis of A. glehnii for taxonomic identification to be used as a reference for future studies on the species. A. glehnii has smooth, thin cuticles, depressed anomocytic stomata dispersed randomly throughout the leaf surface, polygonal epidermal cells with straight to slightly curved anticlinal walls, and no trichomes. There are obvious veins containing thick-walled bundle sheath cells. The stomatal density is between 100 and 150 stomata per millimeter. The vein density ranges from five to 10 veins per millimeter, and the epidermal cells are 10 to 20 μm long and 5 to 10 μm in width. Understanding the connections between the different A. glehnii species and categorizing and identifying them depend heavily on these foliar epidermal structural features. Taxonomy and conservation are closely intertwined because the former serves as the basis for comprehending and safeguarding biodiversity. RESEARCH HIGHLIGHTS: Optical microscopy of the A. glehnii leaf epidermis for taxonomic identification SEM was used to identify and authenticate endemic species Microscopic identification of endemic species can assist in the conservation.
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Affiliation(s)
- Wajid Zaman
- Department of Life Sciences, Yeungnam University, Gyeongsan, Republic of Korea
| | - Eun Mi Lee
- Department of Life Sciences, Yeungnam University, Gyeongsan, Republic of Korea
| | - SeonJoo Park
- Department of Life Sciences, Yeungnam University, Gyeongsan, Republic of Korea
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Sharma G, Brar GS, Knipfer T. Leaf water relations and osmotic adjustment of Canada Western Red Spring wheat cultivars subjected to drought. FUNCTIONAL PLANT BIOLOGY : FPB 2023; 50:1037-1046. [PMID: 37814368 DOI: 10.1071/fp23170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2023] [Accepted: 09/18/2023] [Indexed: 10/11/2023]
Abstract
For wheat (Triticum aestivum ), sustained crop yield at limited soil water availability has been linked to osmotic adjustment (OA) - a physiological mechanism that aids maintenance of leaf hydration status, turgor (P ) and growth. 'Canada Western Red Spring' (CWRS) wheat cultivars are typically grown in rainfed areas with milder climates, but ongoing climate change is increasesing the frequency and intensity of drought events. The overarching goal of this study was to elucidate if commercially used CWRS cultivars ('Superb', 'Stettler', 'AAC Viewfield') have the ability for leaf OA. Measurements of leaf water relation parameters (water potential, Ψ ; solute potential, Ψ s ; stomatal conductance, g s ; relative water content, RWC) showed that all three cultivars reached zero P (= Ψ - Ψ s ) at a leaf Ψ of -1.1MPa. Prior to that, P maintenance in 'Superb' and 'AAC Viewfield' was associated with a significant reduction in leaf Ψ s and OA contributed 0.53MPa ('Superb') and 0.73MPa ('AAC Viewfield'). Our data analyses provided no support for the existence of OA in 'Stettler'. Under water deficit, leaf g s was significantly higher in 'AAC Viewfield' compared to 'Stettler'; it was intermediate in 'Superb'. Together, drought tolerance in CWRS wheat cultivars is most likely linked to the degree of OA.
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Affiliation(s)
- Gopal Sharma
- Faculty of Land and Food Systems, The University of British Columbia, Vancouver, BC V6T 1Z4, Canada
| | - Gurcharn S Brar
- Faculty of Land and Food Systems, The University of British Columbia, Vancouver, BC V6T 1Z4, Canada
| | - Thorsten Knipfer
- Faculty of Land and Food Systems, The University of British Columbia, Vancouver, BC V6T 1Z4, Canada
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Jampoh EA, Sáfrán E, Babinyec-Czifra D, Kristóf Z, Krárné Péntek B, Fábián A, Barnabás B, Jäger K. Morpho-Anatomical, Physiological and Biochemical Adjustments in Response to Heat and Drought Co-Stress in Winter Barley. PLANTS (BASEL, SWITZERLAND) 2023; 12:3907. [PMID: 38005804 PMCID: PMC10674999 DOI: 10.3390/plants12223907] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Revised: 11/09/2023] [Accepted: 11/15/2023] [Indexed: 11/26/2023]
Abstract
This study aimed to investigate the combined effect of high temperatures 10 °C above the optimum and water withholding during microgametogenesis on vegetative processes and determine the response of winter barley genotypes with contrasting tolerance. For this purpose, two barley varieties were analyzed to compare the effect of heat and drought co-stress on their phenology, morpho-anatomy, physiological and biochemical responses and yield constituents. Genotypic variation was observed in response to heat and drought co-stress, which was attributed to differences in anatomy, ultrastructure and physiological and metabolic processes. The co-stress-induced reduction in relative water content, total soluble protein and carbohydrate contents, photosynthetic pigment contents and photosynthetic efficiency of the sensitive Spinner variety was significantly greater than the tolerant Lambada genotype. Based on these observations, it has been concluded that the heat-and-drought stress-tolerance of the Lambada variety is related to the lower initial chlorophyll content of the leaves, the relative resistance of photosynthetic pigments towards stress-triggered degradation, retained photosynthetic parameters and better-preserved leaf ultrastructure. Understanding the key factors underlying heat and drought co-stress tolerance in barley may enable breeders to create barley varieties with improved yield stability under a changing climate.
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Affiliation(s)
- Emmanuel Asante Jampoh
- Biological Resources Department, HUN-REN Centre for Agricultural Research, 2462 Martonvásár, Hungary; (E.A.J.); (E.S.); (D.B.-C.); (B.K.P.); (A.F.); (B.B.)
- Doctoral School of Horticultural Sciences, MATE Hungarian University of Agriculture and Life Sciences, 2100 Gödöllő, Hungary
| | - Eszter Sáfrán
- Biological Resources Department, HUN-REN Centre for Agricultural Research, 2462 Martonvásár, Hungary; (E.A.J.); (E.S.); (D.B.-C.); (B.K.P.); (A.F.); (B.B.)
| | - Dorina Babinyec-Czifra
- Biological Resources Department, HUN-REN Centre for Agricultural Research, 2462 Martonvásár, Hungary; (E.A.J.); (E.S.); (D.B.-C.); (B.K.P.); (A.F.); (B.B.)
- Doctoral School of Biology, Institute of Biology, ELTE Eötvös Loránd University, 1053 Budapest, Hungary
| | - Zoltán Kristóf
- Department of Plant Anatomy, ELTE Eötvös Loránd University, 1053 Budapest, Hungary;
| | - Barbara Krárné Péntek
- Biological Resources Department, HUN-REN Centre for Agricultural Research, 2462 Martonvásár, Hungary; (E.A.J.); (E.S.); (D.B.-C.); (B.K.P.); (A.F.); (B.B.)
| | - Attila Fábián
- Biological Resources Department, HUN-REN Centre for Agricultural Research, 2462 Martonvásár, Hungary; (E.A.J.); (E.S.); (D.B.-C.); (B.K.P.); (A.F.); (B.B.)
| | - Beáta Barnabás
- Biological Resources Department, HUN-REN Centre for Agricultural Research, 2462 Martonvásár, Hungary; (E.A.J.); (E.S.); (D.B.-C.); (B.K.P.); (A.F.); (B.B.)
| | - Katalin Jäger
- Biological Resources Department, HUN-REN Centre for Agricultural Research, 2462 Martonvásár, Hungary; (E.A.J.); (E.S.); (D.B.-C.); (B.K.P.); (A.F.); (B.B.)
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Liaqat W, Altaf MT, Barutçular C, Nawaz H, Ullah I, Basit A, Mohamed HI. Ultraviolet-B radiation in relation to agriculture in the context of climate change: a review. CEREAL RESEARCH COMMUNICATIONS 2023:1-24. [PMID: 37361481 PMCID: PMC10099031 DOI: 10.1007/s42976-023-00375-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Accepted: 04/03/2023] [Indexed: 06/28/2023]
Abstract
Over the past few decades, the amount of ultraviolet-B radiation (UV-B) reaching the earth's surface has been altered due to climate change and stratospheric ozone dynamics. This narrow but highly biologically active spectrum of light (280-320 nm) can affect plant growth and development. Depletion of ozone and climate change are interlinked in a very complicated manner, i.e., significantly contributing to each other. The interaction of climate change, ozone depletion, and changes in UV-B radiation negatively affects the growth, development, and yield of plants. Furthermore, this interaction will become more complex in the coming years. The ozone layer reduction is paving a path for UV-B radiation to impact the surface of the earth and interfere with the plant's normal life by negatively affecting the plant's morphology and physiology. The nature and degree of the future response of the agricultural ecosystem to the decreasing or increasing UV-B radiation in the background of climate change and ozone dynamics are still unclear. In this regard, this review aims to elucidate the effects of enhanced UV-B radiation reaching the earth's surface due to the depletion of the ozone layer on plants' physiology and the performance of major cereals.
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Affiliation(s)
- Waqas Liaqat
- Department of Field Crops, Faculty of Agriculture, Institute of Natural and Applied Sciences, Çukurova University, 01330 Adana, Turkey
| | - Muhammad Tanveer Altaf
- Faculty of Agricultural Sciences and Technology, Department of Plant Protection, Sivas University of Science and Technology, 58140 Sivas, Turkey
| | - Celaleddin Barutçular
- Department of Field Crops, Faculty of Agriculture, Institute of Natural and Applied Sciences, Çukurova University, 01330 Adana, Turkey
| | - Hira Nawaz
- Department of Plant Protection, Faculty of Agriculture, Institute of Natural and Applied Sciences, Çukurova University, 01330 Adana, Turkey
| | - Izhar Ullah
- Department of Horticulture, Faculty of Agriculture, Ondokuz Mayis University, Samsun, Turkey
| | - Abdul Basit
- Department of Horticultural Science, Kyungpook National University, Daegu, 41566 South Korea
| | - Heba I. Mohamed
- Department of Biological and Geological Sciences, Faculty of Education, Ain Shams University, Cairo, 11341 Egypt
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Hamilton K, Rahman T, Sadowski J, Karunakaran C, Tanino K. Identification of ultrastructural and biochemical cuticular markers influencing temperature of ice nucleation in selected genotypes of corn. PHYSIOLOGIA PLANTARUM 2023; 175:e13902. [PMID: 36999192 DOI: 10.1111/ppl.13902] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 02/02/2023] [Accepted: 03/29/2023] [Indexed: 06/19/2023]
Abstract
Corn is an economically important yet frost-sensitive crop, injured at the moment of ice nucleation. However, the influence of autumn temperatures on subsequent ice nucleation temperature is unknown. A 10-day chilling treatment under phytotron conditions ("mild", 18/6°C) or ("extreme", 10/5°C) generated no-visible damage but induced changes in the cuticle of the four genotypes in this study. The putatively more cold hardy Genotypes 884 and 959 leaves nucleated at colder temperatures compared to the more sensitive Genotypes 675 and 275. After chilling treatment, all four genotypes displayed warmer ice nucleation temperatures, with Genotype 884 expressing the largest shift to warmer nucleation temperatures. Cuticular hydrophobicity reduced while cuticular thickness remained unchanged under the chilling treatment. By contrast, under five-week field conditions, cuticle thickness increased in all genotypes, with Genotype 256 expressing a significantly thinner cuticle. FTIR spectroscopy revealed increases in the spectral regions of cuticular lipids in all genotypes after phytotron chilling treatment, while those spectral regions decreased under field conditions. A total of 142 molecular compounds were detected, with 28 compounds significantly induced under either phytotron or field conditions. Of these, seven compounds were induced under both conditions (Alkanes C31-C33, Ester C44, C46, β-amyrin, and triterpene). While clear differential responses were observed, chilling conditions preceding a frost modified physical and biochemical properties of the leaf cuticle under both phytotron and field conditions indicating this response is dynamic and could be a factor in selecting corn genotypes better adapted to avoiding frost with lower ice nucleation temperature.
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Affiliation(s)
- Kaila Hamilton
- Department of Plant Sciences, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan, Canada, S7N 5A8
| | - Tawhidur Rahman
- Department of Plant Sciences, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan, Canada, S7N 5A8
| | - Jason Sadowski
- Department of Plant Sciences, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan, Canada, S7N 5A8
| | | | - Karen Tanino
- Department of Plant Sciences, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan, Canada, S7N 5A8
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Estrada F, Flexas J, Araus JL, Mora-Poblete F, Gonzalez-Talice J, Castillo D, Matus IA, Méndez-Espinoza AM, Garriga M, Araya-Riquelme C, Douthe C, Castillo B, del Pozo A, Lobos GA. Exploring plant responses to abiotic stress by contrasting spectral signature changes. FRONTIERS IN PLANT SCIENCE 2023; 13:1026323. [PMID: 36777544 PMCID: PMC9910286 DOI: 10.3389/fpls.2022.1026323] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 12/23/2022] [Indexed: 06/18/2023]
Abstract
In this study, daily changes over a short period and diurnal progression of spectral reflectance at the leaf level were used to identify spring wheat genotypes (Triticum aestivum L.) susceptible to adverse conditions. Four genotypes were grown in pots experiments under semi-controlled conditions in Chile and Spain. Three treatments were applied: i) control (C), ii) water stress (WS), and iii) combined water and heat shock (WS+T). Spectral reflectance, gas exchange and chlorophyll fluorescence measurements were performed on flag leaves for three consecutive days at anthesis. High canopy temperature ( H CT ) genotypes showed less variability in their mean spectral reflectance signature and chlorophyll fluorescence, which was related to weaker responses to environmental fluctuations. While low canopy temperature ( L CT ) genotypes showed greater variability. The genotypes spectral signature changes, in accordance with environmental fluctuation, were associated with variations in their stomatal conductance under both stress conditions (WS and WS+T); L CT genotypes showed an anisohydric response compared that of H CT , which was isohydric. This approach could be used in breeding programs for screening a large number of genotypes through proximal or remote sensing tools and be a novel but simple way to identify groups of genotypes with contrasting performances.
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Affiliation(s)
- Félix Estrada
- Plant Breeding and Phenomics Center, Faculty of Agricultural Sciences, University of Talca, Talca, Chile
- Instituto de Investigaciones Agropecuarias INIA-Quilamapu, Chillán, Chile
| | - Jaume Flexas
- Instituto de Investigaciones Agropecuarias INIA-Remehue, Osorno, Chile
| | - Jose Luis Araus
- Research Group on Plant Biology Under Mediterranean Conditions, Departament de Biologia, Institute of Agro-Environmental Research and Water Economy, Universitat de les Illes Balears, Illes Balears, Spain
| | - Freddy Mora-Poblete
- Department of Evolutive Biology Ecology, and Environmental Sciences, University of Barcelona, Barcelona, Spain
| | | | - Dalma Castillo
- Departamento de Producción Forestal y Tecnología de la Madera, Facultad de Agronomía, Universidad de la República, Montevideo, Uruguay
| | - Ivan A. Matus
- Instituto de Investigaciones Agropecuarias INIA-Quilamapu, Chillán, Chile
| | | | - Miguel Garriga
- Departamento de Producción Vegetal, Facultad de Agronomía, Universidad de Concepción, Concepción, Chile
| | - Carlos Araya-Riquelme
- Plant Breeding and Phenomics Center, Faculty of Agricultural Sciences, University of Talca, Talca, Chile
| | - Cyril Douthe
- Research Group on Plant Biology Under Mediterranean Conditions, Departament de Biologia, Institute of Agro-Environmental Research and Water Economy, Universitat de les Illes Balears, Illes Balears, Spain
| | - Benjamin Castillo
- Plant Breeding and Phenomics Center, Faculty of Agricultural Sciences, University of Talca, Talca, Chile
| | - Alejandro del Pozo
- Plant Breeding and Phenomics Center, Faculty of Agricultural Sciences, University of Talca, Talca, Chile
| | - Gustavo A. Lobos
- Plant Breeding and Phenomics Center, Faculty of Agricultural Sciences, University of Talca, Talca, Chile
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Mikołajczak K, Kuczyńska A, Krajewski P, Kempa M, Nuc M. Transcriptome profiling disclosed the effect of single and combined drought and heat stress on reprogramming of genes expression in barley flag leaf. FRONTIERS IN PLANT SCIENCE 2023; 13:1096685. [PMID: 36726667 PMCID: PMC9885109 DOI: 10.3389/fpls.2022.1096685] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/12/2022] [Accepted: 12/14/2022] [Indexed: 06/18/2023]
Abstract
Despite numerous studies aimed at unraveling the genetic background of barley's response to abiotic stress, the modulation of the transcriptome induced by combinatorial drought and increased temperature remains largely unrecognized. Very limited studies were done, especially on the flag leaf, which plays an important role in grain filling in cereals. In the present study, transcriptome profiles, along with chlorophyll fluorescence parameters and yield components, were compared between barley genotypes with different flag leaf sizes under single and combined drought and heat stress. High-throughput mRNA sequencing revealed 2,457 differentially expressed genes, which were functionally interpreted using Gene Ontology term enrichment analysis. The transcriptomic signature under double stress was more similar to effects caused by drought than by elevated temperature; it was also manifested at phenotypic and chlorophyll fluorescence levels. Both common and stress-specific changes in transcript abundance were identified. Genes regulated commonly across stress treatments, determining universal stress responses, were associated, among others, with responses to drought, heat, and oxidative stress. In addition, changes specific to the size of the flag leaf blade were found. Our study allowed us to identify sets of genes assigned to various processes underlying the response to drought and heat, including photosynthesis, the abscisic acid pathway, and lipid transport. Genes encoding LEA proteins, including dehydrins and heat shock proteins, were especially induced by stress treatments. Some association between genetic composition and flag leaf size was confirmed. However, there was no general coincidence between SNP polymorphism of genotypes and differential expression of genes induced by stress factors. This research provided novel insight into the molecular mechanisms of barley flag leaf that determine drought and heat response, as well as their co-occurrence.
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Laskoś K, Myśków B, Dziurka M, Warchoł M, Dziurka K, Juzoń K, Czyczyło-Mysza IM. Variation between glaucous and non-glaucous near-isogenic lines of rye (Secale cereale L.) under drought stress. Sci Rep 2022; 12:22486. [PMID: 36577794 PMCID: PMC9797576 DOI: 10.1038/s41598-022-26869-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Accepted: 12/21/2022] [Indexed: 12/29/2022] Open
Abstract
Glaucous (811, L35, and RXL10) and non-glaucous (811bw, L35bw, and RXL10bw) near-isogenic lines (NILs) of rye (Secale cereale L.) forming three pairs of inbred lines were the subject of the research. The research aimed to study the relationship between wax cover attributes and the physio-biochemical drought reactions and yield of rye NILs and to uncover the differences in drought resistance levels of these lines. The greatest differences between glaucous and non-glaucous NILs were observed in the RXL10/RXL10bw pair. Of particular note were the stable grain number and the thousand grain weight of the non-glaucous line RXL10bw under drought and the accompanying reactions, such as an approximately 60% increase in MDA and a two-fold increase in wax amount, both of which were significantly higher than in the glaucous line RXL10 and in other NILs. The surprisingly high level of MDA in the RXL10bw line requires further analysis. Moreover, additional wax crystal aggregates were found under drought conditions on the abaxial leaf surface of the glaucous lines 811 and RXL10. The use of rye NILs indicated that line-specific drought resistance could be associated with wax biosynthetic pathways involved in physiological and biochemical responses important for increased drought resistance.
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Affiliation(s)
- Kamila Laskoś
- grid.460372.4The Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland
| | - Beata Myśków
- grid.411391.f0000 0001 0659 0011Department of Plant Genetics, Breeding and Biotechnology, West-Pomeranian University of Technology, Słowackiego 17, 71-434 Szczecin, Poland
| | - Michał Dziurka
- grid.460372.4The Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland
| | - Marzena Warchoł
- grid.460372.4The Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland
| | - Kinga Dziurka
- grid.460372.4The Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland
| | - Katarzyna Juzoń
- grid.460372.4The Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland
| | - Ilona M. Czyczyło-Mysza
- grid.460372.4The Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland
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Falcioni R, Moriwaki T, Gibin MS, Vollmann A, Pattaro MC, Giacomelli ME, Sato F, Nanni MR, Antunes WC. Classification and Prediction by Pigment Content in Lettuce ( Lactuca sativa L.) Varieties Using Machine Learning and ATR-FTIR Spectroscopy. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11243413. [PMID: 36559526 PMCID: PMC9783279 DOI: 10.3390/plants11243413] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Revised: 12/01/2022] [Accepted: 12/06/2022] [Indexed: 05/14/2023]
Abstract
Green or purple lettuce varieties produce many secondary metabolites, such as chlorophylls, carotenoids, anthocyanins, flavonoids, and phenolic compounds, which is an emergent search in the field of biomolecule research. The main objective of this study was to use multivariate and machine learning algorithms on Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy (ATR-FTIR)-based spectra to classify, predict, and categorize chemometric attributes. The cluster heatmap showed the highest efficiency in grouping similar lettuce varieties based on pigment profiles. The relationship among pigments was more significant than the absolute contents. Other results allow classification based on ATR-FTIR fingerprints of inflections associated with structural and chemical components present in lettuce, obtaining high accuracy and precision (>97%) by using principal component analysis and discriminant analysis (PCA-LDA)-associated linear LDA and SVM machine learning algorithms. In addition, PLSR models were capable of predicting Chla, Chlb, Chla+b, Car, AnC, Flv, and Phe contents, with R2P and RPDP values considered very good (0.81−0.88) for Car, Anc, and Flv and excellent (0.91−0.93) for Phe. According to the RPDP metric, the models were considered excellent (>2.10) for all variables estimated. Thus, this research shows the potential of machine learning solutions for ATR-FTIR spectroscopy analysis to classify, estimate, and characterize the biomolecules associated with secondary metabolites in lettuce.
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Affiliation(s)
- Renan Falcioni
- Plant Ecophysiology Laboratory, Graduate Program in Agronomy, Department of Agronomy, State University of Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
- Correspondence: ; Tel.: +55-44-3011-8940
| | - Thaise Moriwaki
- Plant Ecophysiology Laboratory, Graduate Program in Agronomy, Department of Agronomy, State University of Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
| | - Mariana Sversut Gibin
- Optical Spectroscopy and Thermophysical Properties Research Group, Graduate Program in Physics, Department of Physics, State University of Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
| | - Alessandra Vollmann
- Plant Ecophysiology Laboratory, Graduate Program in Agronomy, Department of Agronomy, State University of Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
| | - Mariana Carmona Pattaro
- Plant Ecophysiology Laboratory, Graduate Program in Agronomy, Department of Agronomy, State University of Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
| | - Marina Ellen Giacomelli
- Plant Ecophysiology Laboratory, Graduate Program in Agronomy, Department of Agronomy, State University of Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
| | - Francielle Sato
- Optical Spectroscopy and Thermophysical Properties Research Group, Graduate Program in Physics, Department of Physics, State University of Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
| | - Marcos Rafael Nanni
- Plant Ecophysiology Laboratory, Graduate Program in Agronomy, Department of Agronomy, State University of Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
| | - Werner Camargos Antunes
- Plant Ecophysiology Laboratory, Graduate Program in Agronomy, Department of Agronomy, State University of Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
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Fang S, Zhao P, Tan Z, Peng Y, Xu L, Jin Y, Wei F, Guo L, Yao X. Combining Physio-Biochemical Characterization and Transcriptome Analysis Reveal the Responses to Varying Degrees of Drought Stress in Brassica napus L. Int J Mol Sci 2022; 23:ijms23158555. [PMID: 35955689 PMCID: PMC9368929 DOI: 10.3390/ijms23158555] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 07/25/2022] [Accepted: 07/28/2022] [Indexed: 02/05/2023] Open
Abstract
Brassica napus L. has become one of the most important oil-bearing crops, and drought stress severely influences its yield and quality. By combining physio-biochemical characterization and transcriptome analysis, we studied the response of B. napus plants to different degrees of drought stress. Some physio-biochemical traits, such as fresh weight (FW), dry weight (DW), abscisic acid (ABA) content, net photosynthetic rate (Pn), stomatal conductance (gs), and transpiration rate (Tr), were measured, and the total content of the epidermal wax/cutin, as well as their compositions, was determined. The results suggest that both stomatal transpiration and cuticular transpiration are affected when B. napus plants are subjected to varying degrees of drought stress. A total of 795 up-regulated genes and 1050 down-regulated genes were identified under severe drought stress by transcriptome analysis. Gene ontology (GO) enrichment analysis of differentially expressed genes (DEGs) revealed that the up-regulated genes were mainly enriched in the stress response processes, such as response to water deprivation and abscisic acid, while the down-regulated genes were mainly enriched in the chloroplast-related parts affecting photosynthesis. Moreover, overexpression of BnaA01.CIPK6, an up-regulated DEG, was found to confer drought tolerance in B. napus. Our study lays a foundation for a better understanding of the molecular mechanisms underlying drought tolerance in B. napus.
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Affiliation(s)
- Shuai Fang
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China; (S.F.); (P.Z.); (Z.T.); (Y.P.); (L.X.); (Y.J.); (L.G.)
- Hubei Hongshan Laboratory, Wuhan 430070, China
| | - Peimin Zhao
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China; (S.F.); (P.Z.); (Z.T.); (Y.P.); (L.X.); (Y.J.); (L.G.)
- Hubei Hongshan Laboratory, Wuhan 430070, China
| | - Zengdong Tan
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China; (S.F.); (P.Z.); (Z.T.); (Y.P.); (L.X.); (Y.J.); (L.G.)
- Hubei Hongshan Laboratory, Wuhan 430070, China
| | - Yan Peng
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China; (S.F.); (P.Z.); (Z.T.); (Y.P.); (L.X.); (Y.J.); (L.G.)
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518000, China
| | - Lintang Xu
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China; (S.F.); (P.Z.); (Z.T.); (Y.P.); (L.X.); (Y.J.); (L.G.)
- Hubei Hongshan Laboratory, Wuhan 430070, China
| | - Yutong Jin
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China; (S.F.); (P.Z.); (Z.T.); (Y.P.); (L.X.); (Y.J.); (L.G.)
- Hubei Hongshan Laboratory, Wuhan 430070, China
| | - Fang Wei
- Oil Crops Research Institute of the Chinese Academy of Agricultural Sciences, Key Laboratory of Oilseeds Processing of Ministry of Agriculture and Hubei Key Laboratory of Lipid Chemistry and Nutrition, Wuhan 430062, China;
| | - Liang Guo
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China; (S.F.); (P.Z.); (Z.T.); (Y.P.); (L.X.); (Y.J.); (L.G.)
- Hubei Hongshan Laboratory, Wuhan 430070, China
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518000, China
- Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University, Wuhan 430070, China
| | - Xuan Yao
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China; (S.F.); (P.Z.); (Z.T.); (Y.P.); (L.X.); (Y.J.); (L.G.)
- Hubei Hongshan Laboratory, Wuhan 430070, China
- Correspondence:
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12
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Arsic M, Persson DP, Schjoerring JK, Thygesen LG, Lombi E, Doolette CL, Husted S. Foliar-applied manganese and phosphorus in deficient barley: Linking absorption pathways and leaf nutrient status. PHYSIOLOGIA PLANTARUM 2022; 174:e13761. [PMID: 36004733 PMCID: PMC9543583 DOI: 10.1111/ppl.13761] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Revised: 07/08/2022] [Accepted: 08/02/2022] [Indexed: 06/15/2023]
Abstract
Foliar fertilization delivers essential nutrients directly to plant tissues, reducing excessive soil fertilizer applications that can lead to eutrophication following nutrient leaching. Foliar nutrient absorption is a dynamic process affected by leaf surface structure and composition, plant nutrient status, and ion physicochemical properties. We applied multiple methods to study the foliar absorption behaviors of manganese (Mn) and phosphorus (P) in nutrient-deficient spring barley (Hordeum vulgare) at two growth stages. Nutrient-specific chlorophyll a fluorescence assays were used to visualize leaf nutrient status, while laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) was used to visualize foliar absorption pathways for P and Mn ions. Rapid Mn absorption was facilitated by a relatively thin cuticle with a low abundance of waxes and a higher stomatal density in Mn-deficient plants. Following absorption, Mn accumulated in epidermal cells and in the photosynthetically active mesophyll, enabling a fast (6 h) restoration of Mn-dependent photosynthetic processes. Conversely, P-deficient plants developed thicker cuticles and epidermal cell walls, which reduced the penetration of P across the leaf surface. Foliar-applied P accumulated in trichomes and fiber cells above leaf veins without reaching the mesophyll and, as a consequence, no restoration of P-dependent photosynthetic processes was observed. This study reveals new links between leaf surface morphology, foliar-applied ion absorption pathways, and the restoration of affected physiological processes in nutrient-deficient leaves. Understanding that ions may have different absorption pathways across the leaf surface is critical for the future development of efficient fertilization strategies for crops in nutrient-limited soils.
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Affiliation(s)
- Maja Arsic
- Department of Plant and Environmental SciencesUniversity of CopenhagenFrederiksberg CDenmark
- University of South AustraliaFuture Industries InstituteMawson LakesSouth AustraliaAustralia
- Present address:
CSIRO Agriculture and Food, Queensland Biosciences PrecinctSt. LuciaQueenslandAustralia
| | - Daniel P. Persson
- Department of Plant and Environmental SciencesUniversity of CopenhagenFrederiksberg CDenmark
| | - Jan K. Schjoerring
- Department of Plant and Environmental SciencesUniversity of CopenhagenFrederiksberg CDenmark
| | - Lisbeth G. Thygesen
- Department of Geosciences and Natural Resource ManagementUniversity of CopenhagenFrederiksberg CDenmark
| | - Enzo Lombi
- University of South AustraliaFuture Industries InstituteMawson LakesSouth AustraliaAustralia
| | - Casey L. Doolette
- University of South AustraliaFuture Industries InstituteMawson LakesSouth AustraliaAustralia
| | - Søren Husted
- Department of Plant and Environmental SciencesUniversity of CopenhagenFrederiksberg CDenmark
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13
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Milla-Moreno E, Guy RD, Soolanayakanahally RY. Enlightening the Pathway of Phytoremediation: Ecophysiology and X-ray Fluorescence Visualization of Two Chilean Hardwoods Exposed to Excess Copper. TOXICS 2022; 10:toxics10050237. [PMID: 35622650 PMCID: PMC9146126 DOI: 10.3390/toxics10050237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 04/29/2022] [Accepted: 05/03/2022] [Indexed: 02/04/2023]
Abstract
In the present climate emergency due to global warming, we are urged to move away from fossil fuels and pursue a speedy conversion to renewable energy systems. Consequently, copper (Cu) will remain in high demand because it is a highly efficient conductor used in clean energy systems to generate power from solar, hydro, thermal and wind energy across the world. Chile is the global leader in copper production, but this position has resulted in Chile having several hundred tailing deposits. We grew two Chilean native hardwood species, quillay (Quillaja saponaria Molina) and espino (Vachellia caven (Molina) Seigler & Ebinger, under three increasing Cu levels (0, 50, and 100 µM) for 6 months in a greenhouse setting. We measured growth, photosynthetic performance and elemental contents of leaves and roots to further evaluate their potential for phytoremediation. Growth of quillay was unaffected by Cu treatment but growth of espino was enhanced, as was its photosynthetic performance, indicating that espino may have an unusually high requirement for copper. Excess Cu was mostly restricted to the roots of both species, where X-ray fluorescence (XRF) mapping indicated some tendency for Cu to accumulate in tissues outside the periderm. Calcium oxalate crystals were prominently visible in XRF images of both species. Nickel (but not Cu) showed a concurrent distribution pattern with these crystals.
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Affiliation(s)
- Estefanía Milla-Moreno
- Department of Forest and Conservation Sciences, Faculty of Forestry, University of British Columbia, Forest Sciences Centre, 2424 Main Mall, Vancouver, BC V6T 1Z4, Canada;
- Correspondence:
| | - Robert Dean Guy
- Department of Forest and Conservation Sciences, Faculty of Forestry, University of British Columbia, Forest Sciences Centre, 2424 Main Mall, Vancouver, BC V6T 1Z4, Canada;
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14
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Tafesse EG, Gali KK, Lachagari VBR, Bueckert R, Warkentin TD. Genome-Wide Association Mapping for Heat and Drought Adaptive Traits in Pea. Genes (Basel) 2021; 12:1897. [PMID: 34946846 PMCID: PMC8701326 DOI: 10.3390/genes12121897] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Revised: 11/24/2021] [Accepted: 11/25/2021] [Indexed: 01/09/2023] Open
Abstract
Heat and drought, individually or in combination, limit pea productivity. Fortunately, substantial genetic diversity exists in pea germplasm for traits related to abiotic stress resistance. Understanding the genetic basis of resistance could accelerate the development of stress-adaptive cultivars. We conducted a genome-wide association study (GWAS) in pea on six stress-adaptive traits with the aim to detect the genetic regions controlling these traits. One hundred and thirty-five genetically diverse pea accessions were phenotyped in field studies across three or five environments under stress and control conditions. To determine marker trait associations (MTAs), a total of 16,877 valuable single nucleotide polymorphisms (SNPs) were used in association analysis. Association mapping detected 15 MTAs that were significantly (p ≤ 0.0005) associated with the six stress-adaptive traits averaged across all environments and consistent in multiple individual environments. The identified MTAs were four for lamina wax, three for petiole wax, three for stem thickness, two for the flowering duration, one for the normalized difference vegetation index (NDVI), and two for the normalized pigment and chlorophyll index (NPCI). Sixteen candidate genes were identified within a 15 kb distance from either side of the markers. The detected MTAs and candidate genes have prospective use towards selecting stress-hardy pea cultivars in marker-assisted selection.
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Affiliation(s)
- Endale G. Tafesse
- Department of Plant Sciences, College of Agriculture and Bio-Resources, University of Saskatchewan, Saskatoon, SK S7N5A8, Canada; (E.G.T.); (K.K.G.); (R.B.)
| | - Krishna K. Gali
- Department of Plant Sciences, College of Agriculture and Bio-Resources, University of Saskatchewan, Saskatoon, SK S7N5A8, Canada; (E.G.T.); (K.K.G.); (R.B.)
| | | | - Rosalind Bueckert
- Department of Plant Sciences, College of Agriculture and Bio-Resources, University of Saskatchewan, Saskatoon, SK S7N5A8, Canada; (E.G.T.); (K.K.G.); (R.B.)
| | - Thomas D. Warkentin
- Department of Plant Sciences, College of Agriculture and Bio-Resources, University of Saskatchewan, Saskatoon, SK S7N5A8, Canada; (E.G.T.); (K.K.G.); (R.B.)
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15
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Zheng J, Yang C, Zheng X, Yan S, Qu F, Zhao J, Pei Y. Lipidomic, Transcriptomic, and BSA-660K Single Nucleotide Polymorphisms Profiling Reveal Characteristics of the Cuticular Wax in Wheat. FRONTIERS IN PLANT SCIENCE 2021; 12:794878. [PMID: 34899814 PMCID: PMC8652291 DOI: 10.3389/fpls.2021.794878] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Accepted: 10/26/2021] [Indexed: 05/15/2023]
Abstract
Plant epidermal wax helps protect plants from adverse environmental conditions, maintains the function of tissues and organs, and ensures normal plant development. However, the constituents of epidermal wax and the regulatory mechanism of their biosynthesis in wheat have not been fully understood. Wheat varieties with different wax content, Jinmai47 and Jinmai84, were selected to comparatively analyze their waxy components and genetic characteristics, using a combination of lipidomic, transcriptomic, and BSA-Wheat 660K chip analysis. Through lipidomic analysis, 1287 lipid molecules were identified representing 31 lipid subclasses. Among these, Diacylglycerols (DG), (O-acyl)-ω-hydroxy fatty acids (OAHFA), wax ester (WE), Triacylglycerols (TG), and Monoradylglycerols (MG) accounted for 96.4% of the total lipids in Jinmai84 and 94.5% in Jinmai47. DG, OAHFA, and WE were higher in Jinmai84 than in Jinmai47 with the content of OAHFA 2.88-fold greater and DG 1.66-fold greater. Transcriptome sequence and bioinformatics analysis revealed 63 differentially expressed genes related to wax biosynthesis. Differentially expressed genes (DEGs) were found to be involved with the OAHFA, DG, and MG of synthesis pathways, which enriched the wax metabolism pathway. Non-glaucous and glaucous bulks from a mapping population were used to identify single nucleotide polymorphisms (SNP) via 660K chip analysis. Two loci centered on chromosomes 2D and 4B were detected and the locus on 4B is likely novel. These data improve understanding of complex lipid metabolism for cuticular wax biosynthesis in wheat and lay the foundation for future detailed investigation of mechanisms regulating wax metabolism.
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Affiliation(s)
- Jun Zheng
- State Key Laboratory of Sustainable Dryland Agriculture, Institute of Wheat Research, Shanxi Agricultural University, Linfen, China
- College of Life Science, Shanxi University, Taiyuan, China
| | - Chenkang Yang
- College of Life Science, Shanxi University, Taiyuan, China
| | - Xingwei Zheng
- State Key Laboratory of Sustainable Dryland Agriculture, Institute of Wheat Research, Shanxi Agricultural University, Linfen, China
| | - Suxian Yan
- State Key Laboratory of Sustainable Dryland Agriculture, Institute of Wheat Research, Shanxi Agricultural University, Linfen, China
| | - Fei Qu
- State Key Laboratory of Sustainable Dryland Agriculture, Institute of Wheat Research, Shanxi Agricultural University, Linfen, China
| | - Jiajia Zhao
- State Key Laboratory of Sustainable Dryland Agriculture, Institute of Wheat Research, Shanxi Agricultural University, Linfen, China
| | - Yanxi Pei
- College of Life Science, Shanxi University, Taiyuan, China
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16
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Khambatta K, Hollings A, Sauzier G, Sanglard LMVP, Klein AR, Tobin MJ, Vongsvivut J, Gibberd MR, Payne AD, Naim F, Hackett MJ. "Wax On, Wax Off": In Vivo Imaging of Plant Physiology and Disease with Fourier Transform Infrared Reflectance Microspectroscopy. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2021; 8:e2101902. [PMID: 34338438 PMCID: PMC8498906 DOI: 10.1002/advs.202101902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/07/2021] [Revised: 06/25/2021] [Indexed: 06/13/2023]
Abstract
Analysis of the epicuticular wax layer on the surface of plant leaves can provide a unique window into plant physiology and responses to environmental stimuli. Well-established analytical methodologies can quantify epicuticular wax composition, yet few methods are capable of imaging wax distribution in situ or in vivo. Here, the first report of Fourier transform infrared (FTIR) reflectance spectroscopic imaging as a non-destructive, in situ, method to investigate variation in epicuticular wax distribution at 25 µm spatial resolution is presented. The authors demonstrate in vivo imaging of alterations in epicuticular waxes during leaf development and in situ imaging during plant disease or exposure to environmental stressors. It is envisaged that this new analytical capability will enable in vivo studies of plants to provide insights into how the physiology of plants and crops respond to environmental stresses such as disease, soil contamination, drought, soil acidity, and climate change.
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Affiliation(s)
- Karina Khambatta
- School of Molecular and Life SciencesCurtin UniversityBentleyWestern Australia6102Australia
| | - Ashley Hollings
- School of Molecular and Life SciencesCurtin UniversityBentleyWestern Australia6102Australia
| | - Georgina Sauzier
- School of Molecular and Life SciencesCurtin UniversityBentleyWestern Australia6102Australia
| | - Lilian M. V. P. Sanglard
- Centre for Crop and Disease ManagementSchool of Molecular and Life SciencesCurtin UniversityBentleyWestern Australia6102Australia
| | - Annaleise R. Klein
- Infrared Microspectroscopy (IRM) BeamlineANSTO – Australian Synchrotron800 Blackburn RoadClaytonVictoria3168Australia
| | - Mark J. Tobin
- Infrared Microspectroscopy (IRM) BeamlineANSTO – Australian Synchrotron800 Blackburn RoadClaytonVictoria3168Australia
| | - Jitraporn Vongsvivut
- Infrared Microspectroscopy (IRM) BeamlineANSTO – Australian Synchrotron800 Blackburn RoadClaytonVictoria3168Australia
| | - Mark R. Gibberd
- Centre for Crop and Disease ManagementSchool of Molecular and Life SciencesCurtin UniversityBentleyWestern Australia6102Australia
| | - Alan D. Payne
- School of Molecular and Life SciencesCurtin UniversityBentleyWestern Australia6102Australia
| | - Fatima Naim
- Centre for Crop and Disease ManagementSchool of Molecular and Life SciencesCurtin UniversityBentleyWestern Australia6102Australia
| | - Mark J. Hackett
- School of Molecular and Life SciencesCurtin UniversityBentleyWestern Australia6102Australia
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17
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Laskoś K, Czyczyło‐Mysza IM, Dziurka M, Noga A, Góralska M, Bartyzel J, Myśków B. Correlation between leaf epicuticular wax composition and structure, physio-biochemical traits and drought resistance in glaucous and non-glaucous near-isogenic lines of rye. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 108:93-119. [PMID: 34288188 PMCID: PMC9291005 DOI: 10.1111/tpj.15428] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Revised: 07/10/2021] [Accepted: 07/14/2021] [Indexed: 05/06/2023]
Abstract
The objective of this research was to investigate the differences between glaucous and non-glaucous near-isogenic lines (NILs) of winter rye (Secale cereale L.) in terms of epicuticular wax layer properties (weight, composition, and crystal morphology), selected physiological and biochemical responses, yield components, above-ground biomass, and plant height under soil drought stress. An important aspect of this analysis was to examine the correlation between the above characteristics. Two different NIL pairs were tested, each consisting of a typical glaucous line and a non-glaucous line with a recessive mutation. The drought experiment was conducted twice (2015-2016). Our study showed that wax accumulation during drought was not correlated with higher leaf hydration and glaucousness. Environmental factors had a large impact on the response of the lines to drought in individual years, both in terms of physiological and biochemical reactions, and the composition of epicuticular leaf wax. The analysed pairs displayed significantly different responses to drought. Demonstration of the correlation between the components of rye leaf wax and the physiological and biochemical parameters of rye NILs is a significant achievement of this work. Interestingly, the study showed a correlation between the wax components and the content of photosynthetic pigments and tocopherols, whose biosynthesis, similarly to the biosynthesis of wax precursors, is mainly located in chloroplasts. This suggests a relationship between wax biosynthesis and plant response to various environmental conditions and drought stress.
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Affiliation(s)
- Kamila Laskoś
- The Franciszek Górski Institute of Plant Physiology Polish Academy of SciencesNiezapominajek 2130‐239Kraków
Poland
| | - Ilona M. Czyczyło‐Mysza
- The Franciszek Górski Institute of Plant Physiology Polish Academy of SciencesNiezapominajek 2130‐239Kraków
Poland
| | - Michał Dziurka
- The Franciszek Górski Institute of Plant Physiology Polish Academy of SciencesNiezapominajek 2130‐239Kraków
Poland
| | - Angelika Noga
- The Franciszek Górski Institute of Plant Physiology Polish Academy of SciencesNiezapominajek 2130‐239Kraków
Poland
| | - Magdalena Góralska
- Department of Plant Genetics, Breeding and BiotechnologyWest‐Pomeranian University of TechnologySłowackiego 1771‐434SzczecinPoland
| | - Jakub Bartyzel
- Department of Applied Nuclear PhysicsFaculty of Physics and Applied Computer ScienceAGH University of Science and TechnologyMickiewicza 330‐059KrakówPoland
| | - Beata Myśków
- Department of Plant Genetics, Breeding and BiotechnologyWest‐Pomeranian University of TechnologySłowackiego 1771‐434SzczecinPoland
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18
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Abstract
With the global climate anomalies and the destruction of ecological balance, the water shortage has become a serious ecological problem facing all mankind, and drought has become a key factor restricting the development of agricultural production. Therefore, it is essential to study the drought tolerance of crops. Based on previous studies, we reviewed the effects of drought stress on plant morphology and physiology, including the changes of external morphology and internal structure of root, stem, and leaf, the effects of drought stress on osmotic regulation substances, drought-induced proteins, and active oxygen metabolism of plants. In this paper, the main drought stress signals and signal transduction pathways in plants are described, and the functional genes and regulatory genes related to drought stress are listed, respectively. We summarize the above aspects to provide valuable background knowledge and theoretical basis for future agriculture, forestry breeding, and cultivation.
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19
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Dissecting the Roles of Cuticular Wax in Plant Resistance to Shoot Dehydration and Low-Temperature Stress in Arabidopsis. Int J Mol Sci 2021; 22:ijms22041554. [PMID: 33557073 PMCID: PMC7913816 DOI: 10.3390/ijms22041554] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2021] [Revised: 01/29/2021] [Accepted: 01/29/2021] [Indexed: 12/30/2022] Open
Abstract
Cuticular waxes are a mixture of hydrophobic very-long-chain fatty acids and their derivatives accumulated in the plant cuticle. Most studies define the role of cuticular wax largely based on reducing nonstomatal water loss. The present study investigated the role of cuticular wax in reducing both low-temperature and dehydration stress in plants using Arabidopsis thaliana mutants and transgenic genotypes altered in the formation of cuticular wax. cer3-6, a known Arabidopsis wax-deficient mutant (with distinct reduction in aldehydes, n-alkanes, secondary n-alcohols, and ketones compared to wild type (WT)), was most sensitive to water loss, while dewax, a known wax overproducer (greater alkanes and ketones compared to WT), was more resistant to dehydration compared to WT. Furthermore, cold-acclimated cer3-6 froze at warmer temperatures, while cold-acclimated dewax displayed freezing exotherms at colder temperatures compared to WT. Gas Chromatography-Mass Spectroscopy (GC-MS) analysis identified a characteristic decrease in the accumulation of certain waxes (e.g., alkanes, alcohols) in Arabidopsis cuticles under cold acclimation, which was additionally reduced in cer3-6. Conversely, the dewax mutant showed a greater ability to accumulate waxes under cold acclimation. Fourier Transform Infrared Spectroscopy (FTIR) also supported observations in cuticular wax deposition under cold acclimation. Our data indicate cuticular alkane waxes along with alcohols and fatty acids can facilitate avoidance of both ice formation and leaf water loss under dehydration stress and are promising genetic targets of interest.
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Sanjari S, Shobbar ZS, Ghanati F, Afshari-Behbahanizadeh S, Farajpour M, Jokar M, Khazaei A, Shahbazi M. Molecular, chemical, and physiological analyses of sorghum leaf wax under post-flowering drought stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 159:383-391. [PMID: 33450508 DOI: 10.1016/j.plaphy.2021.01.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2020] [Accepted: 01/02/2021] [Indexed: 06/12/2023]
Abstract
Wax accumulation on the sorghum surface plays an important role in drought tolerance by preventing non-stomatal water loss. Thereby, the effect of post-flowering drought stress (PFDS) on the epicuticular wax (EW) amount, relative water content (RWC), chlorophyll, and grain yield in sorghum drought contrasting genotypes were investigated. The experiment was conducted as a split-plot based on randomized complete block design (RCBD) with two water treatments (normal watering and water holding after 50% flowering stage), and three genotypes (Kimia and KGS23 as drought-tolerant and Sepideh as drought-susceptible). Scanning electron microscopy and GC-MS analyses were used to determine the wax crystals density and its compositions, respectively. In addition, based on literature reviews and publicly available datasets, six wax biosynthesis drought stress-responsive genes were chosen for expression analysis. The results showed that the amounts of EW and wax crystals density were increased in Kimia and Sepideh genotypes and no changed in KGS23 genotype under drought stress. Chemical compositions of wax were classified into six major groups including alkanes, fatty acids, aldehydes, esters, alcohols, and cyclic compounds. Alkanes increment in drought-tolerant genotypes led to make an effective barrier against the drought stress to control water losses. In addition, the drought-tolerant genotypes had higher levels of RWC compared to the drought-susceptible ones, resulted in higher yield produced under drought condition. According to the results, SbWINL1, FATB, and CER1 genes play important roles in drought-induced wax biosynthesis. The results of the present study revealed a comprehensive view of the wax and its compositions and some involved genes in sorghum under drought stress.
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Affiliation(s)
- Sepideh Sanjari
- Department of Systems Biology, Agricultural Biotechnology Research Institute of Iran, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran.
| | - Zahra-Sadat Shobbar
- Department of Systems Biology, Agricultural Biotechnology Research Institute of Iran, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran.
| | - Faezeh Ghanati
- Faculty of Biological Sciences, Tarbiat Modares University, Tehran, Iran.
| | | | - Mostafa Farajpour
- Crop and Horticultural Science Research Department, Mazandaran Agricultural and Natural Resources Research and Education Center, Agricultural Research, Education and Extension Organization (AREEO), Sari, Iran.
| | - Mojtaba Jokar
- Seed and Plant Improvement Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - Azim Khazaei
- Seed and Plant Improvement Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - Maryam Shahbazi
- Gorgan University of Agricultural Sciences and Natural Resources, Gorgan, Iran.
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21
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Abhirami P, Modupalli N, Natarajan V. Novel postharvest intervention using rice bran wax edible coating for shelf‐life enhancement of
Solanum lycopersicum
fruit. J FOOD PROCESS PRES 2020. [DOI: 10.1111/jfpp.14989] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Panoth Abhirami
- Department of Food Processing and Nutraceuticals Padmashree Institute of Management and Sciences Bangalore Karnataka India
| | - Nikitha Modupalli
- Department of Food Engineering Indian Institute of Food Processing Technology Thanjavur Tamil Nadu India
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22
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Read TL, Doolette CL, Li C, Schjoerring JK, Kopittke PM, Donner E, Lombi E. Optimising the foliar uptake of zinc oxide nanoparticles: Do leaf surface properties and particle coating affect absorption? PHYSIOLOGIA PLANTARUM 2020; 170:384-397. [PMID: 32652623 DOI: 10.1111/ppl.13167] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2020] [Revised: 06/11/2020] [Accepted: 07/06/2020] [Indexed: 05/12/2023]
Abstract
Foliar absorption of zinc (Zn) is limited by several barriers, the first of which is the leaf cuticle. In this study, we investigated the absorption of Zn from Zn oxide nanoparticles (ZnO-NPs) in wheat (Triticum aestivum cv Gladius) and sunflower (Helianthus annuus cv Hyoleic 41) to determine the importance of NP surface coating for Zn absorption. Fourier transform infrared (FTIR) spectroscopy showed a higher polysaccharide content in the wheat cuticle than sunflower, indicated by a more pronounced glycosidic bond at 1020 cm-1 , but wax and cutin content were similar. Scanning electron microscopy (SEM) revealed that trichome density was twice as high in wheat (3600 ± 900 cm-2 ) as in sunflower (1600 cm-2 ) and stomatal density four times higher in sunflower (6400 ± 800 cm-2 in wheat and 22 900 cm-2 in sunflower). Suspensions of ZnO-NPs with coatings of different hydrophobicity were applied to leaves to compare Zn absorption using X-ray fluorescence microscopy (XFM) and inductively coupled plasma mass spectroscopy (ICP-MS). Absorption of Zn was similar between wheat and sunflower when Zn was applied at 1000 mg Zn l-1 , but much less Zn was absorbed from all ZnO products than from soluble Zn fertiliser. Particle coating did not affect Zn absorption, but it may facilitate particle adhesion to leaves, providing a longer-term source of resupply of Zn ions to the leaves. Differences in leaf surface characteristics did not affect Zn absorption, indicating that the cuticle is the main pathway of absorption under these conditions.
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Affiliation(s)
- Thea Lund Read
- University of South Australia, Future Industries Institute, Mawson Lakes, South Australia, 5095, Australia
| | - Casey Louise Doolette
- University of South Australia, Future Industries Institute, Mawson Lakes, South Australia, 5095, Australia
| | - Cui Li
- Northwestern Polytechnical University, Research Centre for Ecology and Environmental Sciences, Xi'an, 710072, China
| | - Jan Kofod Schjoerring
- Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DK-1871, Denmark
| | - Peter Martin Kopittke
- The University of Queensland, School of Agriculture and Food Sciences, St. Lucia, Queensland, 4072, Australia
| | - Erica Donner
- University of South Australia, Future Industries Institute, Mawson Lakes, South Australia, 5095, Australia
| | - Enzo Lombi
- University of South Australia, Future Industries Institute, Mawson Lakes, South Australia, 5095, Australia
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23
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Matschi S, Vasquez MF, Bourgault R, Steinbach P, Chamness J, Kaczmar N, Gore MA, Molina I, Smith LG. Structure-function analysis of the maize bulliform cell cuticle and its potential role in dehydration and leaf rolling. PLANT DIRECT 2020; 4:e00282. [PMID: 33163853 PMCID: PMC7598327 DOI: 10.1002/pld3.282] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Revised: 09/15/2020] [Accepted: 10/01/2020] [Indexed: 05/03/2023]
Abstract
The hydrophobic cuticle of plant shoots serves as an important interaction interface with the environment. It consists of the lipid polymer cutin, embedded with and covered by waxes, and provides protection against stresses including desiccation, UV radiation, and pathogen attack. Bulliform cells form in longitudinal strips on the adaxial leaf surface, and have been implicated in the leaf rolling response observed in drought-stressed grass leaves. In this study, we show that bulliform cells of the adult maize leaf epidermis have a specialized cuticle, and we investigate its function along with that of bulliform cells themselves. Bulliform cells displayed increased shrinkage compared to other epidermal cell types during dehydration of the leaf, providing a potential mechanism to facilitate leaf rolling. Analysis of natural variation was used to relate bulliform strip patterning to leaf rolling rate, providing further evidence of a role for bulliform cells in leaf rolling. Bulliform cell cuticles showed a distinct ultrastructure with increased cuticle thickness compared to other leaf epidermal cells. Comparisons of cuticular conductance between adaxial and abaxial leaf surfaces, and between bulliform-enriched mutants versus wild-type siblings, showed a correlation between elevated water loss rates and presence or increased density of bulliform cells, suggesting that bulliform cuticles are more water-permeable. Biochemical analysis revealed altered cutin composition and increased cutin monomer content in bulliform-enriched tissues. In particular, our findings suggest that an increase in 9,10-epoxy-18-hydroxyoctadecanoic acid content, and a lower proportion of ferulate, are characteristics of bulliform cuticles. We hypothesize that elevated water permeability of the bulliform cell cuticle contributes to the differential shrinkage of these cells during leaf dehydration, thereby facilitating the function of bulliform cells in stress-induced leaf rolling observed in grasses.
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Affiliation(s)
- Susanne Matschi
- Section of Cell and Developmental BiologyUniversity of California San DiegoLa JollaCAUSA
- Present address:
Department Biochemistry of Plant InteractionsLeibniz Institute of Plant BiochemistryWeinberg 3Halle (Saale)Germany
| | - Miguel F. Vasquez
- Section of Cell and Developmental BiologyUniversity of California San DiegoLa JollaCAUSA
| | | | - Paul Steinbach
- Howard Hughes Medical InstituteUniversity of California San DiegoLa JollaCAUSA
| | - James Chamness
- Plant Breeding and Genetics SectionSchool of Integrative Plant ScienceCornell UniversityIthacaNYUSA
- Present address:
Department of Genetics, Cell Biology, and DevelopmentUniversity of MinnesotaSaint PaulMN55108USA
| | - Nicholas Kaczmar
- Plant Breeding and Genetics SectionSchool of Integrative Plant ScienceCornell UniversityIthacaNYUSA
| | - Michael A. Gore
- Plant Breeding and Genetics SectionSchool of Integrative Plant ScienceCornell UniversityIthacaNYUSA
| | - Isabel Molina
- Department of BiologyAlgoma UniversitySault Ste. MarieONCanada
| | - Laurie G. Smith
- Section of Cell and Developmental BiologyUniversity of California San DiegoLa JollaCAUSA
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24
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Gomaa WMS, Feng X, Zhang H, Zhang X, Zhang W, Yan X, Peng Q, Yu P. Application of advanced molecular spectroscopy and modern evaluation techniques in canola molecular structure and nutrition property research. Crit Rev Food Sci Nutr 2020; 61:3256-3266. [PMID: 32787447 DOI: 10.1080/10408398.2020.1798343] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
This review aims to provide research update and progress on applications of advanced molecular spectroscopy to current research on canola related bio-processing technology, molecular structure, and nutrient utilization and availability. The studies focused on how inherent molecular structure changes affect nutritional quality of canola and its co-products from bio-processing. The molecular spectroscopic techniques (SR-IMS, DRIFT, ATR-FTIR) used for molecular structure and nutrition association were reviewed, including the synchrotron radiation with infrared microspectroscopy, the synchrotron radiation with soft x-ray microspectroscopy, the diffuse reflectance infrared Fourier transform spectroscopy, the grading near infrared reflectance spectroscopy, and the Fourier transform infrared vibrational spectroscopy. Nutritional evaluation with other techniques in association with molecular structure was also reviewed. This study provides updated research progress on application of molecular spectroscopy in combination with various nutrition evaluation techniques to current research in the canola-related bio-oil/bio-energy processing and nutrition sciences.
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Affiliation(s)
- Walaa M S Gomaa
- Department of Animal and Poultry Science, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Canada
| | - Xin Feng
- Department of Animal and Poultry Science, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Canada.,School of Life Science and Engineering, Foshan University, Foshan, China
| | - Huihua Zhang
- School of Life Science and Engineering, Foshan University, Foshan, China
| | - Xuewei Zhang
- Department of Animal and Poultry Science, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Canada.,College of Animal Science and Animal Veterinary, Tianjin Agricultural University, Tianjin, China
| | - Weixian Zhang
- College of Animal Science and Technology, Henan University of Animal Husbandry and Economy, Zhengzhou, China
| | - Xiaogang Yan
- Department of Animal and Poultry Science, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Canada.,The Branch Academy of Animal Science, Jilin Academy of Agricultural Science, Gongzhuling, China
| | - Quanhui Peng
- Department of Animal and Poultry Science, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Canada.,Animal Nutrition Institute, Sichuan Agricultural University, Ya'an, China
| | - Peiqiang Yu
- Department of Animal and Poultry Science, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Canada
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25
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Trezzi MM, Teixeira SD, de Lima VA, Scalcon EL, Pagnoncelli Junior FDB, Salomão HM. Relationship between the amount and composition of epicuticular wax and tolerance of Ipomoea biotypes to glyphosate. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART. B, PESTICIDES, FOOD CONTAMINANTS, AND AGRICULTURAL WASTES 2020; 55:959-967. [PMID: 32781888 DOI: 10.1080/03601234.2020.1799657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Ipomoea species are troublesome weeds in crop systems through Brazil. Drought stress typically reduces glyphosate efficacy by reducing the foliar uptake of herbicides and their translocation. Using both glyphosate tolerant (GT) and sensitive (GS) plants from Ipomoea grandifolia, I. indivisa and I. purpurea species, this research aimed to (a) correlate amounts of epicuticular wax and tolerance to glyphosate in plants and (b) determine the effect of drought stress (DStress) on changes in the quantity and chemical composition of plant epicuticular waxes. The dose that causes 50% inhibition of growth (GR50) of the biotypes varied between 62 and 1208 (I. grandifolia), 159 and 913 (I. indivisa), and 389 and 1925 g a.e. ha-1 of glyphosate (I. purpurea). There was low inverse correlation (-0.46) between the amount of epicuticular wax and the sensitivity to glyphosate. GT biotypes of the species presented greater plastic capacities than GS biotypes for increasing the amount of epicuticular wax under DStress. The three Ipomoea species exhibited different chemical profiles of waxes supported by IR spectra, which allows for their differentiation. For I. grandifolia and I. purpurea, there was an increase in the polar components in the state without DStress, while for the species I. indivisa, no differences in infrared spectra were detected between the two water conditions.
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Affiliation(s)
- Michelangelo Muzell Trezzi
- Department of Agronomy (DAAGRO), Federal Technological University of Paraná - UTFPR, Pato Branco, PR, Brazil
| | - Sirlei Dias Teixeira
- Department of Chemistry, Federal Technological University of Paraná - UTFPR. Pato Branco, Pato Branco, PR, Brazil
| | - Vanderlei Aparecido de Lima
- Department of Chemistry, Federal Technological University of Paraná - UTFPR. Pato Branco, Pato Branco, PR, Brazil
| | - Everton Luiz Scalcon
- Department of Agronomy (DAAGRO), Federal Technological University of Paraná - UTFPR, Pato Branco, PR, Brazil
| | | | - Helis Marina Salomão
- Department of Agronomy (DAAGRO), Federal Technological University of Paraná - UTFPR, Pato Branco, PR, Brazil
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26
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Bednarek PT, Zebrowski J, Orłowska R. Exploring the Biochemical Origin of DNA Sequence Variation in Barley Plants Regenerated via in Vitro Anther Culture. Int J Mol Sci 2020; 21:E5770. [PMID: 32796744 PMCID: PMC7461140 DOI: 10.3390/ijms21165770] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Revised: 08/06/2020] [Accepted: 08/10/2020] [Indexed: 12/14/2022] Open
Abstract
Tissue culture is an essential tool for the regeneration of uniform plant material. However, tissue culture conditions can be a source of abiotic stress for plants, leading to changes in the DNA sequence and methylation patterns. Despite the growing evidence on biochemical processes affected by abiotic stresses, how these altered biochemical processes affect DNA sequence and methylation patterns remains largely unknown. In this study, the methylation-sensitive Amplified Fragment Length Polymorphism (metAFLP) approach was used to investigate de novo methylation, demethylation, and sequence variation in barley regenerants derived by anther culture. Additionally, we used Attenuated Total Reflectance Fourier Transform Infrared (ATR-FTIR) spectroscopy to identify the spectral features of regenerants, which were then analyzed by mediation analysis. The infrared spectrum ranges (710-690 and 1010-940 cm-1) identified as significant in the mediation analysis were most likely related to β-glucans, cellulose, and S-adenosyl-L-methionine (SAM). Additionally, the identified compounds participated as predictors in moderated mediation analysis, explaining the role of demethylation of CHG sites (CHG_DMV) in in vitro tissue culture-induced sequence variation, depending on the duration of tissue culture. The data demonstrate that ATR-FTIR spectroscopy is a useful tool for studying the biochemical compounds that may affect DNA methylation patterns and sequence variation, if combined with quantitative characteristics determined using metAFLP molecular markers and mediation analysis. The role of β-glucans, cellulose, and SAM in DNA methylation, and in cell wall, mitochondria, and signaling, are discussed to highlight the putative cellular mechanisms involved in sequence variation.
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Affiliation(s)
- Piotr T. Bednarek
- Department of Plant Physiology and Biochemistry, Plant Breeding and Acclimatization Institute—National Research Institute, Radzików, 05-870 Błonie, Poland;
| | - Jacek Zebrowski
- Institute of Biology and Biotechnology, University of Rzeszow, Al. Rejtana 16c A, 35-959 Rzeszow, Poland;
| | - Renata Orłowska
- Department of Plant Physiology and Biochemistry, Plant Breeding and Acclimatization Institute—National Research Institute, Radzików, 05-870 Błonie, Poland;
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27
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Khadka K, Earl HJ, Raizada MN, Navabi A. A Physio-Morphological Trait-Based Approach for Breeding Drought Tolerant Wheat. FRONTIERS IN PLANT SCIENCE 2020; 11:715. [PMID: 32582249 PMCID: PMC7286286 DOI: 10.3389/fpls.2020.00715] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2019] [Accepted: 05/06/2020] [Indexed: 05/18/2023]
Abstract
In the past, there have been drought events in different parts of the world, which have negatively influenced the productivity and production of various crops including wheat (Triticum aestivum L.), one of the world's three important cereal crops. Breeding new high yielding drought-tolerant wheat varieties is a research priority specifically in regions where climate change is predicted to result in more drought conditions. Commonly in breeding for drought tolerance, grain yield is the basis for selection, but it is a complex, late-stage trait, affected by many factors aside from drought. A strategy that evaluates genotypes for physiological responses to drought at earlier growth stages may be more targeted to drought and time efficient. Such an approach may be enabled by recent advances in high-throughput phenotyping platforms (HTPPs). In addition, the success of new genomic and molecular approaches rely on the quality of phenotypic data which is utilized to dissect the genetics of complex traits such as drought tolerance. Therefore, the first objective of this review is to describe the growth-stage based physio-morphological traits that could be targeted by breeders to develop drought-tolerant wheat genotypes. The second objective is to describe recent advances in high throughput phenotyping of drought tolerance related physio-morphological traits primarily under field conditions. We discuss how these strategies can be integrated into a comprehensive breeding program to mitigate the impacts of climate change. The review concludes that there is a need for comprehensive high throughput phenotyping of physio-morphological traits that is growth stage-based to improve the efficiency of breeding drought-tolerant wheat.
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Affiliation(s)
- Kamal Khadka
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
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28
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Morphological, Physiological, and Genetic Responses to Salt Stress in Alfalfa: A Review. AGRONOMY-BASEL 2020. [DOI: 10.3390/agronomy10040577] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Alfalfa (Medicago sativa L.) is an important legume forage crop. However, its genetic improvement for salt tolerance is challenging, as alfalfa’s response to salt stress is genetically and physiologically complex. A review was made to update the knowledge of morphological, physiological, biochemical, and genetic responses of alfalfa plants to salt stress, and to discuss the potential of applying modern plant technologies to enhance alfalfa salt-resistant breeding, including genomic selection, RNA-Seq analysis, and cutting-edge Synchrotron beamlines. It is clear that alfalfa salt tolerance can be better characterized, genes conditioning salt tolerance be identified, and new marker-based tools be developed to accelerate alfalfa breeding for salt tolerance.
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29
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Su R, Chen L, Wang Z, Hu Y. Differential response of cuticular wax and photosynthetic capacity by glaucous and non-glaucous wheat cultivars under mild and severe droughts. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 147:303-312. [PMID: 31901453 DOI: 10.1016/j.plaphy.2019.12.036] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Revised: 12/19/2019] [Accepted: 12/26/2019] [Indexed: 06/10/2023]
Abstract
Cuticular wax is known to play an important role in non-stomatal transpiration. However, support is lacking regarding the waxy phenotype for wheat breeding against drought. In this study, four wheat cultivars with different wax phenotypes (glaucous and non-glaucous types) were used to evaluate their responses to drought stress and impact on photosynthetic capability of wheat. Xinong 291 and HY 2912, with the glaucous trait, demonstrated higher diketone ratios and contents compared with Pubing 201 and Jinmai 47, which are the non-glaucous type. The cultivars HY 2912 and Jinmai 47 had 35% higher biomass than did Xinong 291 and Pubing 201 under severe drought condition. HY 2912 exhibited the highest wax load with or without drought stress. Jinmai 47 showed the highest ratio of alkane content. Among glaucous cultivars, drought-resistant HY 2912 may promote growth by decreasing water loss, increasing the diketone content, increasing the total wax load, and maintaining mesophyll and stomatal conductance. Among non-glaucous cultivars, drought-resistant Jinmai 47 may enhance growth via stomatal closure and increased mesophyll conductance and alkane ratios. The glaucous trait was not always associated with drought resistance, and correlation analysis revealed that the diketone ratio was positively related to the intercellular CO2 concentration. These results suggest that the mechanism of drought resistance in wheat is systematically regulated by wax alteration, stomatal conductance and mesophyll conductance. Therefore, wax content and composition as well as mesophyll and stomatal regulation should be considered in the breeding and selection of drought-resistant wheat cultivars.
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Affiliation(s)
- Rina Su
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Yangling, Shaanxi, PR China
| | - Liang Chen
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Yangling, Shaanxi, PR China
| | - Zhonghua Wang
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Yangling, Shaanxi, PR China
| | - Yingang Hu
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Yangling, Shaanxi, PR China; Institute of Water Saving Agriculture in Arid Regions of China, Yangling, Shaanxi, 712100, PR China.
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30
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Willick IR, Stobbs J, Karunakaran C, Tanino KK. Phenotyping Plant Cellular and Tissue Level Responses to Cold with Synchrotron-Based Fourier-Transform Infrared Spectroscopy and X-Ray Computed Tomography. Methods Mol Biol 2020; 2156:141-159. [PMID: 32607980 DOI: 10.1007/978-1-0716-0660-5_11] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Despite the extensive use of synchrotron radiation in material and biomedical sciences, it has only recently been utilized to expand our understanding of plant responses to environmental stress. Recent advances have led to the development of phenotyping platforms to identify chemical and morphological differences in breeding plant material. While these methodologies are applicable for and tested with a variety of abiotic and biotic stresses, they are particularly useful as a first step to identify cold-induced chemical and morphological changes in plants. Here, we describe two methods to determine cold acclimation-induced changes at the cellular and tissue levels. First, we illustrate how to quantify and visualize changes in tissue chemistry using Fourier-transform infrared spectroscopy. Second, we describe how to nondestructively prepare, analyze, and interpret X-ray phase contrast images and render this data as two- or three-dimensional models. While these techniques utilize synchrotron radiation, the methodology and standard practices are applicable for handheld and laboratory bench-top equipment operating with conventional light sources.
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Affiliation(s)
- Ian R Willick
- Department of Plant Sciences, University of Saskatchewan, Saskatoon, SK, Canada
| | | | | | - Karen K Tanino
- Department of Plant Sciences, University of Saskatchewan, Saskatoon, SK, Canada.
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31
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Faseela P, Puthur JT. Intraspecific variation in sensitivity of high yielding rice varieties towards UV-B radiation. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2019; 25:727-740. [PMID: 31168235 PMCID: PMC6522621 DOI: 10.1007/s12298-019-00646-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2018] [Revised: 12/19/2018] [Accepted: 01/28/2019] [Indexed: 05/14/2023]
Abstract
Effective screening of thirteen commonly cultivated rice (Oryza sativa L.) varieties was carried out to evaluate the varietal-specific differences in morphological, physiological and biochemical responses to various doses of UV-B irradiation (7, 14, 21 and 28 kJ m-2d-1). Determination of UV-B tolerant rice varieties would be helpful in selecting a suitable variety for the areas experiencing higher influx of UV-B radiation. Based on the initial screening of thirteen rice varieties, carried out by analyzing shoot length, fresh weight, photosynthetic pigments and the rate of lipid peroxidation under various doses of UV-B, it was found that Mangalamahsuri, Aathira, Kanchana, Jyothi and Annapoorna were tolerant lines and Neeraja, Swetha, Swarnaprabha and Aiswarya were the sensitive ones. Further screening of these nine varieties was done by analyzing primary metabolites (total protein, soluble sugar and proline content) and non enzymatic antioxidants (ascorbate and glutathione) involved in free radical scavenging mechanism to mitigate the negative effects of UV-B irradiation. Based on the cumulative stress response index (CSRI), the sum of relative individual component responses (total protein, soluble sugar, proline, ascorbate and glutathione content) at each UV-B treatment and total stress response index (TSRI), the sum of CSRI of all the four UV-B treatments for each variety, nine rice varieties selected after primary screening were classified as tolerant (Mangalamahsuri, Aathira and Kanchana), intermediate (Jyothi, Annapoorna, Neeraja and Swetha) and sensitive (Swarnaprabha and Aiswarya).
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Affiliation(s)
- Parammal Faseela
- Plant Physiology and Biochemistry Division, Department of Botany, University of Calicut, Malappuram, Kerala 673635 India
| | - Jos Thomas Puthur
- Plant Physiology and Biochemistry Division, Department of Botany, University of Calicut, Malappuram, Kerala 673635 India
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32
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Vergara-Díaz O, Chairi F, Vicente R, Fernandez-Gallego JA, Nieto-Taladriz MT, Aparicio N, Kefauver SC, Araus JL. Leaf dorsoventrality as a paramount factor determining spectral performance in field-grown wheat under contrasting water regimes. JOURNAL OF EXPERIMENTAL BOTANY 2018; 69:3081-3094. [PMID: 29617831 PMCID: PMC5972577 DOI: 10.1093/jxb/ery109] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2017] [Accepted: 03/13/2018] [Indexed: 05/31/2023]
Abstract
The effects of leaf dorsoventrality and its interaction with environmentally induced changes in the leaf spectral response are still poorly understood, particularly for isobilateral leaves. We investigated the spectral performance of 24 genotypes of field-grown durum wheat at two locations under both rainfed and irrigated conditions. Flag leaf reflectance spectra in the VIS-NIR-SWIR (visible-near-infrared-short-wave infrared) regions were recorded in the adaxial and abaxial leaf sides and at the canopy level, while traits providing information on water status and grain yield were evaluated. Moreover, leaf anatomical parameters were measured in a subset of five genotypes. The spectral traits studied were more affected by the leaf side than by the water regime. Leaf dorsoventral differences suggested higher accessory pigment content in the abaxial leaf side, while water regime differences were related to increased chlorophyll, nitrogen, and water contents in the leaves in the irrigated treatment. These variations were associated with anatomical changes. Additionally, leaf dorsoventral differences were less in the rainfed treatment, suggesting the existence of leaf-side-specific responses at the anatomical and biochemical level. Finally, the accuracy in yield prediction was enhanced when abaxial leaf spectra were employed. We concluded that the importance of dorsoventrality in spectral traits is paramount, even in isobilateral leaves.
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Affiliation(s)
- Omar Vergara-Díaz
- Integrative Crop Ecophysiology Group, Plant Physiology Section, Faculty of Biology, University of Barcelona, Diagonal, Barcelona, Spain
| | - Fadia Chairi
- Integrative Crop Ecophysiology Group, Plant Physiology Section, Faculty of Biology, University of Barcelona, Diagonal, Barcelona, Spain
| | - Rubén Vicente
- Integrative Crop Ecophysiology Group, Plant Physiology Section, Faculty of Biology, University of Barcelona, Diagonal, Barcelona, Spain
| | - Jose A Fernandez-Gallego
- Integrative Crop Ecophysiology Group, Plant Physiology Section, Faculty of Biology, University of Barcelona, Diagonal, Barcelona, Spain
| | | | - Nieves Aparicio
- Technological and Agricultural Institute of Castilla y León (ITACyL), Valladolid, Spain
| | - Shawn C Kefauver
- Integrative Crop Ecophysiology Group, Plant Physiology Section, Faculty of Biology, University of Barcelona, Diagonal, Barcelona, Spain
| | - José Luis Araus
- Integrative Crop Ecophysiology Group, Plant Physiology Section, Faculty of Biology, University of Barcelona, Diagonal, Barcelona, Spain
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