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Wang G, Ma L. A Novel Image Segmentation Method for Cardiac MRI Using Support Vector Machine Algorithm Based on Particle Swarm Optimization. JOURNAL OF MEDICAL IMAGING AND HEALTH INFORMATICS 2021. [DOI: 10.1166/jmihi.2021.3510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
At present, heart disease not only has a significant impact on the quality of human life but also poses a greater impact on people’s health. Therefore, it is very important to be able to diagnose heart disease as early as possible and give corresponding treatment. Heart image
segmentation is the primary operation of intelligent heart disease diagnosis. The quality of segmentation directly determines the effect of intelligent diagnosis. Because the running time of image segmentation is often longer, coupled with the characteristics of cardiac MR imaging technology
and the structural characteristics of the cardiac target itself, the rapid segmentation of cardiac MRI images still has challenges. Aiming at the long running time of traditional methods and low segmentation accuracy, a medical image segmentation (MIS) method based on particle swarm optimization
(PSO) optimized support vector machine (SVM) is proposed, referred to as PSO-SVM. First, the current iteration number and population number in PSO are added to the control strategy of inertial weight λ to improve the performance of PSO inertial weight λ. Find the
optimal penalty coefficient C and γ in the gaussian kernel function by PSO. Then use the SVM method to establish the best classification model and test the data. Compared with traditional methods, this method not only shortens the running time, but also improves the segmentation
accuracy. At the same time, comparing the influence of traditional inertial weights on segmentation results, the improved method reduces the average convergence algebra and shortens the optimization time.
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Affiliation(s)
- Guanghui Wang
- Department of Network Management, Non-Commissioned Officer’s School of the Chinese People’s Armed Police Force, Hangzhou, Zhejiang 310012, China
| | - Lihong Ma
- The High School Attached to Zhejiang University, Hangzhou, Zhejiang 310007, China
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Camphor HS, Bareja C, Glynn-Robinson A, Polkinghorne BG, Durrheim DN. A novel semi-quantitative methodology for national poliovirus reintroduction and outbreak risk assessment. Travel Med Infect Dis 2021; 44:102181. [PMID: 34678503 DOI: 10.1016/j.tmaid.2021.102181] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2021] [Revised: 10/13/2021] [Accepted: 10/18/2021] [Indexed: 12/16/2022]
Abstract
BACKGROUND Under the International Health Regulations (2005), World Health Organization Member States need to verify certification of polio-free status annually. In 2018, Australia sought to reassess and comprehensively characterise the risk posed by wild-type and vaccine-derived poliovirus introductions to national health security. However formal guidelines for national polio risk assessment were not publicly available. METHODS Four risk elements were identified and weighted using an expert-informed modified Delphi method: reintroduction hazard; population susceptibility; detection capability; and response capability. Australian data and qualitative evidence were analysed, documented and scored against risk element indicators to characterise polio risk as a semi-quantitative estimate and qualitative risk category statement. RESULTS The semi-quantitative risk characterisation calculated likelihood and impact scores of 0.43 and 0.13, respectively (possible range: 0.02-4.5). The assessment concluded that the risk of poliovirus reintroduction, resultant outbreaks of poliovirus infection, and sustained transmission occurring in Australia is very low. CONCLUSIONS Until poliovirus is eradicated, it remains in countries' strategic health security interest to maintain optimal investment in polio prevention, preparedness, surveillance and response capability to manage their level of risk. We present a structured, transparent and reproducible methodology for national or sub-national polio risk characterisation that generates evidence for targeted investment to maintain polio-free status.
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Affiliation(s)
- Hendrik S Camphor
- Office of Health Protection, Australian Government Department of Health, Canberra, Australia; The National Centre for Epidemiology and Population Health, Australian National University, Canberra, Australia.
| | - Christina Bareja
- Office of Health Protection, Australian Government Department of Health, Canberra, Australia.
| | - Anna Glynn-Robinson
- Office of Health Protection, Australian Government Department of Health, Canberra, Australia.
| | - Benjamin G Polkinghorne
- The National Centre for Epidemiology and Population Health, Australian National University, Canberra, Australia.
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Okiror S, Mulugeta A, Onuekwusi I, Braka F, Malengemi S, Burton J, Hydarav R, Toure B, Davis B, Gathenji C, Nwogu C, Okeibunor J. Polio Outbreak Investigation and Response in The Horn of Africa: 2013-2016. ACTA ACUST UNITED AC 2021; Spec Issue:1104. [PMID: 33954302 PMCID: PMC7610730 DOI: 10.29245/2578-3009/2021/s2.1104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Background There has been civil strife, spanning more than two decades in some countries and recurrent natural disasters in the Horn of Africa (HoA). This has consistently maintained these countries in chronic humanitarian conditions. More important however is the fact that these crises have also denied populations of these countries access to access to lifesaving health services. Children in the difficult terrains and security compromised areas are not given the required immunization services to build their immunity against infectious diseases like the poliovirus. This was the situation in 2013 when the large outbreaks of poliovirus occurred in the HoA. This article reviews the epidemiology, risk, and programme response to what is now famed as the 2013-204 poliovirus outbreaks in the HoA and highlights the challenges that the programme faced in interrupting poliovirus transmission here. Methods A case of acute flaccid paralysis (AFP) was defined as a child <15 years of age with sudden onset of fever and paralysis. Polio cases were defined as AFP cases with stool specimens positive for WPV. Results Between 2013 and 2016, when transmission was interrupted 20,266 polio viruses were in the Horn of Africa region. In response to the outbreak, several supplementary immunization activities were conducted with oral polio vaccine (OPV) The trivalent OPV was used initially, followed subsequently by bivalent OPV, and targeting various age groups, including children aged <5 years, children aged <10 years, and individuals of any age. Other response activities were undertaken to supplement the immunization in controlling the outbreak. Some of these activities included the use of various communication strategies to create awareness, sensitize and mobilize the populations against poliovirus transmission. Conclusions The outbreaks were attributed to the existence of clusters of unvaccinated children due to inaccessibility to them by the health system, caused by poor geographical terrain and conflicts. The key lesson therefore is that the existence of populations with low immunity to infections will necessary constitutes breeding grounds for disease outbreak and of course reservoirs to the vectors. Though brought under reasonable control, the outbreaks indicate that the threat of large polio outbreaks resulting from poliovirus importation will remain constant unless polio transmission is interrupted in the remaining polio-endemic countries of the world.
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Affiliation(s)
- Samuel Okiror
- WHO Horn of Africa Coordination Office (HOA), Nairobi KENYA
| | | | | | | | | | | | | | | | | | | | - Chidiadi Nwogu
- WHO Horn of Africa Coordination Office (HOA), Nairobi KENYA
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Scott RP, Cullen AC, Chabot‐Couture G. Disease Surveillance Investments and Administration: Limits to Information Value in Pakistan Polio Eradication. RISK ANALYSIS : AN OFFICIAL PUBLICATION OF THE SOCIETY FOR RISK ANALYSIS 2021; 41:273-288. [PMID: 32822075 PMCID: PMC7984073 DOI: 10.1111/risa.13580] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2019] [Revised: 07/28/2020] [Accepted: 08/01/2020] [Indexed: 05/04/2023]
Abstract
In Pakistan, annual poliovirus investment decisions drive quantities of supplemental immunization campaigns districts receive. In this article, we assess whether increased spending on poliovirus surveillance is associated with greater likelihood of correctly identifying districts at high risk of polio with assignment of an elevated "risk ranking." We reviewed programmatic documents from Pakistan for the period from 2012-2017, recording whether districts had been classified as "high risk" or "low risk" in each year. Through document review, we developed a decision tree to describe the ranking decisions. Then, integrating data from the World Health Organization and Global Polio Eradication Initiative, we constructed a Bayesian decision network reflecting investments in polio surveillance and immunization campaigns, surveillance metrics, disease incidence, immunization rates, and occurrence of polio cases. We test these factors for statistical association with the outcome of interest-a change in risk rank between the beginning and the end of the one-year time period. We simulate different spending scenarios and predict their impact on district risk ranking in future time periods. We find that per district spending increases are associated with increased identification of cases of acute flaccid paralysis (AFP). However, the low specificity of AFP investment and the largely invariant ranking of district risk means that even large increases in surveillance spending are unlikely to promote major changes in risk rankings at the current stage of the Pakistan polio eradication campaign.
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Affiliation(s)
- Ryan P. Scott
- Daniel J. Evans School of Public Policy and GovernanceUniversity of WashingtonSeattleWAUSA
- Political ScienceColorado State UniversityFort CollinsCOUSA
| | - Alison C. Cullen
- Daniel J. Evans School of Public Policy and GovernanceUniversity of WashingtonSeattleWAUSA
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Greenberg M, Cox A, Bier V, Lambert J, Lowrie K, North W, Siegrist M, Wu F. Risk Analysis: Celebrating the Accomplishments and Embracing Ongoing Challenges. RISK ANALYSIS : AN OFFICIAL PUBLICATION OF THE SOCIETY FOR RISK ANALYSIS 2020; 40:2113-2127. [PMID: 32579763 DOI: 10.1111/risa.13487] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Accepted: 03/26/2020] [Indexed: 05/20/2023]
Abstract
As part of the celebration of the 40th anniversary of the Society for Risk Analysis and Risk Analysis: An International Journal, this essay reviews the 10 most important accomplishments of risk analysis from 1980 to 2010, outlines major accomplishments in three major categories from 2011 to 2019, discusses how editors circulate authors' accomplishments, and proposes 10 major risk-related challenges for 2020-2030. Authors conclude that the next decade will severely test the field of risk analysis.
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Affiliation(s)
- Michael Greenberg
- Edward J. Bloustein School, Rutgers University, New Brunswick, NJ, USA
| | | | - Vicki Bier
- University of Wisconsin, Madison, Wisconsin, USA
| | - Jim Lambert
- University of Virginia, Charlottesville, Virginia, USA
| | - Karen Lowrie
- Edward J. Bloustein School, Rutgers University, New Brunswick, NJ, USA
| | | | | | - Felicia Wu
- Michigan State University, East Lansing, Michigan, USA
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Tesfaye B, Sowe A, Kisangau N, Ogange J, Ntoburi S, Nekar I, Muitherero C, Camara Y, Gathenji C, Langat D, Sergon K, Limo H, Nzunza R, Kiptoon S, Kareko D, Onuekwusi I. An epidemiological analysis of Acute Flaccid Paralysis (AFP) surveillance in Kenya, 2016 to 2018. BMC Infect Dis 2020; 20:611. [PMID: 32811467 PMCID: PMC7437168 DOI: 10.1186/s12879-020-05319-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2019] [Accepted: 08/03/2020] [Indexed: 12/02/2022] Open
Abstract
Background The poliovirus has been targeted for eradication since 1988. Kenya reported its last case of indigenous Wild Poliovirus (WPV) in 1984 but suffered from an outbreak of circulating Vaccine-derived Poliovirus type 2 (cVDPV2) in 2018. We aimed to describe Kenya’s polio surveillance performance 2016–2018 using WHO recommended polio surveillance standards. Methods Retrospective secondary data analysis was conducted using Kenyan AFP surveillance case-based database from 2016 to 2018. Analyses were carried out using Epi-Info statistical software (version 7) and mapping was done using Quantum Geographic Information System (GIS) (version 3.4.1). Results Kenya reported 1706 cases of AFP from 2016 to 2018. None of the cases were confirmed as poliomyelitis. However, 23 (1.35%) were classified as polio compatible. Children under 5 years accounted for 1085 (63.6%) cases, 937 (55.0%) cases were boys, and 1503 (88.1%) cases had received three or more doses of Oral Polio Vaccine (OPV). AFP detection rate substantially increased over the years; however, the prolonged health workers strike in 2017 negatively affected key surveillance activities. The mean Non-Polio (NP-AFP) rate during the study period was 2.87/ 100,000 children under 15 years, and two adequate specimens were collected for 1512 (88.6%) AFP cases. Cumulatively, 31 (66.0%) counties surpassed target for both WHO recommended AFP quality indicators. Conclusions The performance of Kenya’s AFP surveillance system surpassed the minimum WHO recommended targets for both non-polio AFP rate and stool adequacy during the period studied. In order to strengthen the country’s polio free status, health worker’s awareness on AFP surveillance and active case search should be strengthened in least performing counties to improve case detection. Similar analyses should be done at the sub-county level to uncover underperformance that might have been hidden by county level analysis.
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Affiliation(s)
- Brook Tesfaye
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya.
| | - Alieu Sowe
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya
| | - Ngina Kisangau
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya
| | - John Ogange
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya
| | - Stephen Ntoburi
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya
| | - Irene Nekar
- Polio Surge Consultant, African Field Epidemiology Network, Nairobi, Kenya
| | - Charles Muitherero
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya
| | - Yaya Camara
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya
| | - Carolyne Gathenji
- Horn of Africa Polio Eradication Coordination Office, Nairobi, Kenya
| | - Daniel Langat
- Division of Disease Surveillance and Response, Ministry of Health, Nairobi, Kenya
| | - Kibet Sergon
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya
| | - Hilary Limo
- Division of Disease Surveillance and Response, Ministry of Health, Nairobi, Kenya
| | - Rosemary Nzunza
- Kenya Medical Research Institute, Center for Virus Research, Ministry of Health, Nairobi, Kenya
| | - Shem Kiptoon
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya
| | - David Kareko
- Division of Disease Surveillance and Response, Ministry of Health, Nairobi, Kenya
| | - Iheoma Onuekwusi
- World Health Organization, Kenya Country Office, United Nations Office in Nairobi (UNON), Gigiri Complex, Block U, Nairobi, Kenya
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Patel JC, Diop OM, Gardner T, Chavan S, Jorba J, Wassilak SGF, Ahmed J, Snider CJ. Surveillance to Track Progress Toward Polio Eradication - Worldwide, 2017-2018. MMWR-MORBIDITY AND MORTALITY WEEKLY REPORT 2019; 68:312-318. [PMID: 30946737 PMCID: PMC6611474 DOI: 10.15585/mmwr.mm6813a4] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Tohme RA, Francois J, Cavallaro KF, Paluku G, Yalcouye I, Jackson E, Wright T, Adrien P, Katz MA, Hyde TB, Faye P, Kimanuka F, Dietz V, Vertefeuille J, Lowrance D, Dahl B, Patel R. Expansion of Vaccination Services and Strengthening Vaccine-Preventable Diseases Surveillance in Haiti, 2010-2016. Am J Trop Med Hyg 2017; 97:28-36. [PMID: 29064356 PMCID: PMC5676636 DOI: 10.4269/ajtmh.16-0802] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Abstract
Following the 2010 earthquake, Haiti was at heightened risk for vaccine-preventable diseases (VPDs) outbreaks due to the exacerbation of long-standing gaps in the vaccination program and subsequent risk of VPD importation from other countries. Therefore, partners supported the Haitian Ministry of Health and Population to improve vaccination services and VPD surveillance. During 2010–2016, three polio, measles, and rubella vaccination campaigns were implemented, achieving a coverage > 90% among children and maintaining Haiti free of those VPDs. Furthermore, Haiti is on course to eliminate maternal and neonatal tetanus, with 70% of communes achieving tetanus vaccine two-dose coverage > 80% among women of childbearing age. In addition, the vaccine cold chain storage capacity increased by 91% at the central level and 285% at the department level, enabling the introduction of three new vaccines (pentavalent, rotavirus, and pneumococcal conjugate vaccines) that could prevent an estimated 5,227 deaths annually. Haiti moved from the fourth worst performing country in the Americas in 2012 to the sixth best performing country in 2015 for adequate investigation of suspected measles/rubella cases. Sentinel surveillance sites for rotavirus diarrhea and meningococcal meningitis were established to estimate baseline rates of those diseases prior to vaccine introduction and to evaluate the impact of vaccination in the future. In conclusion, Haiti significantly improved vaccination services and VPD surveillance. However, high dependence on external funding and competing vaccination program priorities are potential threats to sustaining the improvements achieved thus far. Political commitment and favorable economic and legal environments are needed to maintain these gains.
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Affiliation(s)
- Rania A Tohme
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | - Jeannot Francois
- Direction du Program Elargi de Vaccination (DPEV), Ministry of Public Health and Population, Port-au-Prince, Haiti
| | - Kathleen F Cavallaro
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | - Gilson Paluku
- Pan American Health Organization, Port-au-Prince, Haiti
| | | | | | - Tracie Wright
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | - Paul Adrien
- Direction d'Épidémiologie, de Laboratoire et de Recherche (DELR), Ministry of Public Health and Population, Port-au-Prince, Haiti
| | - Mark A Katz
- Centers for Disease Control and Prevention, Port-au-Prince, Haiti
| | - Terri B Hyde
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | - Pape Faye
- Pan American Health Organization, Port-au-Prince, Haiti
| | | | - Vance Dietz
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | - John Vertefeuille
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | - David Lowrance
- Centers for Disease Control and Prevention, Port-au-Prince, Haiti
| | - Benjamin Dahl
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | - Roopal Patel
- Centers for Disease Control and Prevention, Port-au-Prince, Haiti
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Mercer LD, Safdar RM, Ahmed J, Mahamud A, Khan MM, Gerber S, O’Leary A, Ryan M, Salet F, Kroiss SJ, Lyons H, Upfill-Brown A, Chabot-Couture G. Spatial model for risk prediction and sub-national prioritization to aid poliovirus eradication in Pakistan. BMC Med 2017; 15:180. [PMID: 29017491 PMCID: PMC5635525 DOI: 10.1186/s12916-017-0941-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/07/2017] [Accepted: 09/06/2017] [Indexed: 11/29/2022] Open
Abstract
BACKGROUND Pakistan is one of only three countries where poliovirus circulation remains endemic. For the Pakistan Polio Eradication Program, identifying high risk districts is essential to target interventions and allocate limited resources. METHODS Using a hierarchical Bayesian framework we developed a spatial Poisson hurdle model to jointly model the probability of one or more paralytic polio cases, and the number of cases that would be detected in the event of an outbreak. Rates of underimmunization, routine immunization, and population immunity, as well as seasonality and a history of cases were used to project future risk of cases. RESULTS The expected number of cases in each district in a 6-month period was predicted using indicators from the previous 6-months and the estimated coefficients from the model. The model achieves an average of 90% predictive accuracy as measured by area under the receiver operating characteristic (ROC) curve, for the past 3 years of cases. CONCLUSIONS The risk of poliovirus has decreased dramatically in many of the key reservoir areas in Pakistan. The results of this model have been used to prioritize sub-national areas in Pakistan to receive additional immunization activities, additional monitoring, or other special interventions.
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Affiliation(s)
- Laina D. Mercer
- Institute for Disease Modeling, 3150 138th Ave SE, Bellevue, WA 98005 USA
| | - Rana M. Safdar
- National Emergency Operations Centre for Polio Eradication, Islamabad, Pakistan
| | - Jamal Ahmed
- National Emergency Operations Centre for Polio Eradication, Islamabad, Pakistan
- World Health Organization, Islamabad, Pakistan
| | - Abdirahman Mahamud
- National Emergency Operations Centre for Polio Eradication, Islamabad, Pakistan
- World Health Organization, Islamabad, Pakistan
| | - M. Muzaffar Khan
- National Emergency Operations Centre for Polio Eradication, Islamabad, Pakistan
- World Health Organization, Islamabad, Pakistan
| | - Sue Gerber
- Bill and Melinda Gates Foundation, Seattle, WA USA
| | - Aiden O’Leary
- National Emergency Operations Centre for Polio Eradication, Islamabad, Pakistan
- United Nations Children’s Fund (UNICEF), Islamabad, Pakistan
| | - Mike Ryan
- National Emergency Operations Centre for Polio Eradication, Islamabad, Pakistan
| | - Frank Salet
- National Emergency Operations Centre for Polio Eradication, Islamabad, Pakistan
| | - Steve J. Kroiss
- Institute for Disease Modeling, 3150 138th Ave SE, Bellevue, WA 98005 USA
| | - Hil Lyons
- Institute for Disease Modeling, 3150 138th Ave SE, Bellevue, WA 98005 USA
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Tangermann RH, Lamoureux C, Tallis G, Goel A. The critical role of acute flaccid paralysis surveillance in the Global Polio Eradication Initiative. Int Health 2017; 9:156-163. [DOI: 10.1093/inthealth/ihx016] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Accepted: 05/12/2017] [Indexed: 01/01/2023] Open
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Thompson KM. Modeling and Managing the Risks of Measles and Rubella: A Global Perspective Part II. RISK ANALYSIS : AN OFFICIAL PUBLICATION OF THE SOCIETY FOR RISK ANALYSIS 2017; 37:1041-1051. [PMID: 28471528 DOI: 10.1111/risa.12823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Accepted: 03/16/2017] [Indexed: 06/07/2023]
Abstract
Measles and rubella continue to circulate globally. Complementing Part I of the special issue, this introduction provides a contrast between other global eradication initiatives and the experience with measles and rubella eradication to date. This introduction builds on the syntheses of the literature provided in Part I and it describes the creation and application of a national risk assessment tool and the development of a dynamic disease transmission model to support global efforts to optimally manage measles and rubella globally using vaccines. Currently, efforts to eradicate measles and rubella suffer from the lack of a commitment to global eradication by key stakeholders, despite strong evidence that their eradication represents a better health and financial option than continued control.
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Affiliation(s)
- Kimberly M Thompson
- Kid Risk, Inc., Orlando, FL, USA
- University of Central Florida, College of Medicine, Orlando, FL, USA
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12
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Lam E, Schluter WW, Masresha BG, Teleb N, Bravo-Alcántara P, Shefer A, Jankovic D, McFarland J, Elfakki E, Takashima Y, Perry RT, Dabbagh AJ, Banerjee K, Strebel PM, Goodson JL. Development of a District-Level Programmatic Assessment Tool for Risk of Measles Virus Transmission. RISK ANALYSIS : AN OFFICIAL PUBLICATION OF THE SOCIETY FOR RISK ANALYSIS 2017; 37:1052-1062. [PMID: 25976980 DOI: 10.1111/risa.12409] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
All six World Health Organization (WHO) regions have now set goals for measles elimination by or before 2020. To prioritize measles elimination efforts and use available resources efficiently, there is a need to identify at-risk areas that are offtrack from meeting performance targets and require strengthening of programmatic efforts. This article describes the development of a WHO measles programmatic risk assessment tool to be used for monitoring, guiding, and sustaining measles elimination efforts at the subnational level. We outline the tool development process; the tool specifications and requirements for data inputs; the framework of risk categories, indicators, and scoring; and the risk category assignment. Overall risk was assessed as a function of indicator scores that fall into four main categories: population immunity, surveillance quality, program performance, and threat assessment. On the basis of the overall score, the tool assigns each district a risk of either low, medium, high, or very high. The cut-off criteria for the risk assignment categories were based on the distribution of scores from all possible combinations of individual indicator cutoffs. The results may be used for advocacy to communicate risk to policymakers, mobilize resources for corrective actions, manage population immunity, and prioritize programmatic activities. Ongoing evaluation of indicators will be needed to evaluate programmatic performance and plan risk mitigation activities effectively. The availability of a comprehensive tool that can identify at-risk districts will enhance efforts to prioritize resources and implement strategies for achieving the Global Vaccine Action Plan goals for measles elimination.
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Affiliation(s)
- Eugene Lam
- Centers for Disease Control and Prevention (CDC), Center for Global Health, Global Immunization Division, Atlanta, GA, USA
| | - W William Schluter
- World Health Organization (WHO), Western Pacific Regional Office, Manila, Philippines
| | | | - Nadia Teleb
- WHO, Eastern Mediterranean Regional Office, Cairo, Egypt
| | | | | | | | | | | | - Yoshihiro Takashima
- World Health Organization (WHO), Western Pacific Regional Office, Manila, Philippines
| | | | | | | | | | - James L Goodson
- Centers for Disease Control and Prevention (CDC), Center for Global Health, Global Immunization Division, Atlanta, GA, USA
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O’Reilly KM, Lamoureux C, Molodecky NA, Lyons H, Grassly NC, Tallis G. An assessment of the geographical risks of wild and vaccine-derived poliomyelitis outbreaks in Africa and Asia. BMC Infect Dis 2017; 17:367. [PMID: 28549485 PMCID: PMC5446690 DOI: 10.1186/s12879-017-2443-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2016] [Accepted: 05/04/2017] [Indexed: 11/26/2022] Open
Abstract
BACKGROUND The international spread of wild poliomyelitis outbreaks continues to threaten eradication of poliomyelitis and in 2014 a public health emergency of international concern was declared. Here we describe a risk scoring system that has been used to assess country-level risks of wild poliomyelitis outbreaks, to inform prioritisation of mass vaccination planning, and describe the change in risk from 2014 to 2016. The methods were also used to assess the risk of emergence of vaccine-derived poliomyelitis outbreaks. METHODS Potential explanatory variables were tested against the reported outbreaks of wild poliomyelitis since 2003 using multivariable regression analysis. The regression analysis was translated to a risk score and used to classify countries as Low, Medium, Medium High and High risk, based on the predictive ability of the score. RESULTS Indicators of population immunity, population displacement and diarrhoeal disease were associated with an increased risk of both wild and vaccine-derived outbreaks. High migration from countries with wild cases was associated with wild outbreaks. High birth numbers were associated with an increased risk of vaccine-derived outbreaks. CONCLUSIONS Use of the scoring system is a transparent and rapid approach to assess country risk of wild and vaccine-derived poliomyelitis outbreaks. Since 2008 there has been a steep reduction in the number of wild poliomyelitis outbreaks and the reduction in countries classified as High and Medium High risk has reflected this. The risk of vaccine-derived poliomyelitis outbreaks has varied geographically. These findings highlight that many countries remain susceptible to poliomyelitis outbreaks and maintenance or improvement in routine immunisation is vital.
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Affiliation(s)
- Kathleen M. O’Reilly
- MRC Centre for Outbreak Analysis and Modelling, Department of Infectious Disease Epidemiology, St Mary’s Campus, Imperial College London, London, UK
| | | | - Natalie A. Molodecky
- MRC Centre for Outbreak Analysis and Modelling, Department of Infectious Disease Epidemiology, St Mary’s Campus, Imperial College London, London, UK
| | - Hil Lyons
- Institute for Disease Modelling, Seattle, USA
| | - Nicholas C. Grassly
- MRC Centre for Outbreak Analysis and Modelling, Department of Infectious Disease Epidemiology, St Mary’s Campus, Imperial College London, London, UK
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Voorman A, Lyons HM. Measuring polio immunity to plan immunization activities. Vaccine 2016; 34:5946-5952. [PMID: 27771181 PMCID: PMC5104692 DOI: 10.1016/j.vaccine.2016.10.017] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2016] [Revised: 10/03/2016] [Accepted: 10/04/2016] [Indexed: 11/12/2022]
Abstract
Reliability and comparability of reported polio vaccine dose histories are studied. In many areas, reported doses have a weak relationship to immunization activities. Data quality may distort risk assessment and immunization activity allocation. Alternative data should be considered for planning polio immunization activities.
The Global Polio Eradication Initiative is closer than ever to achieving a polio-free world. Immunization activities must still be carried out in non-endemic countries to maintain population immunity at levels which will stop poliovirus from spreading if it is re-introduced from still-infected areas. In areas where there is no active transmission of poliovirus, programs must rely on surrogate indicators of population immunity to determine the appropriate immunization activities, typically caregiver-reported vaccination history obtained from non-polio acute flaccid paralysis patients identified through polio surveillance. We used regression models to examine the relationship between polio vaccination campaigns and caregiver-reported polio vaccination history. We find that in many countries, vaccination campaigns have a surprisingly weak impact on these commonly used indicators. We conclude that alternative criteria and data, such as routine immunization indicators from vaccination records or household surveys, should be considered for planning polio vaccination campaigns, and that validation of such surrogate indicators is necessary if they are to be used as the basis for program planning and risk assessment. We recommend that the GPEI and similar organizations consider or continue devoting additional resources to rigorously study population immunity and campaign effectiveness in at-risk countries.
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Affiliation(s)
- Arend Voorman
- The Bill and Melinda Gates Foundation, 500th 5th Ave N, Seattle, WA 98109, USA.
| | - Hil M Lyons
- The Institute for Disease Modeling, 3150 139th Ave SE, Bellevue, WA 98005, USA.
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Upfill-Brown AM, Voorman A, Chabot-Couture G, Shuaib F, Lyons HM. Analysis of vaccination campaign effectiveness and population immunity to support and sustain polio elimination in Nigeria. BMC Med 2016; 14:60. [PMID: 27029535 PMCID: PMC4812602 DOI: 10.1186/s12916-016-0600-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/14/2015] [Accepted: 03/12/2016] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND The world is closer than ever to a polio-free Africa. In this end-stage, it is important to ensure high levels of population immunity to prevent polio outbreaks. Here, we introduce a new method of assessing vaccination campaign effectiveness and estimating immunity at the district-level. We demonstrate how this approach can be used to plan the vaccination campaigns prospectively to better manage population immunity in Northern Nigeria. METHODS Using Nigerian acute flaccid paralysis surveillance data from 2004-2014, we developed a Bayesian hierarchical model of campaign effectiveness and compared it to lot-quality assurance sampling data. We then used reconstructed sero-specific population immunity based on campaign history and compared district estimates of immunity to the occurrence of confirmed poliovirus cases. RESULTS Estimated campaign effectiveness has improved across northern Nigeria since 2004, with Kano state experiencing an increase of 40 % (95 % CI, 26-54 %) in effectiveness from 2013 to 2014. Immunity to type 1 poliovirus has increased steadily. On the other hand, type 2 immunity was low and variable until the recent use of trivalent oral polio vaccine. We find that immunity estimates are related to the occurrence of both wild and vaccine-derived poliovirus cases and that campaign effectiveness correlates with direct measurements using lot-quality assurance sampling. Future campaign schedules highlight the trade-offs involved with using different vaccine types. CONCLUSIONS The model in this study provides a novel method for assessing vaccination campaign performance and epidemiologically-relevant estimates of population immunity. Small-area estimates of campaign effectiveness can then be used to evaluate prospective campaign plans. This modeling approach could be applied to other countries as well as other vaccine preventable diseases.
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Affiliation(s)
| | | | | | - Faisal Shuaib
- Federal Ministry of Health, Federal Republic of Nigeria, Abuja, FCT, Nigeria.,National Polio Emergency Operations Center, Abuja, FCT, Nigeria
| | - Hil M Lyons
- Institute for Disease Modeling, Bellevue, WA, USA.
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16
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Lim MCY, Wang YF, Huang SW, Yang JY, Wang JR. High Incidence of Mammalian Orthoreovirus Identified by Environmental Surveillance in Taiwan. PLoS One 2015; 10:e0142745. [PMID: 26555962 PMCID: PMC4640864 DOI: 10.1371/journal.pone.0142745] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2015] [Accepted: 10/25/2015] [Indexed: 12/21/2022] Open
Abstract
Wild poliovirus (WPV) persists in diverse locales worldwide, spreading outward from endemic areas. In response to the international threat of WPV transmission and changes in the national vaccination policy, we established an environmental surveillance system to monitor the circulation of wild and vaccine-related poliovirus in Taiwan. From July 2012 to December 2013, we collected sewage specimens every month from 10 sewage treatment plants located throughout Taiwan. The specimens were concentrated by the two-phase separation method and then inoculated into L20B, RD, and A549 cells for virus isolation. Viral isolates were identified and serotyped by immunofluorescence assay or molecular analysis. A total of 300 sewage samples were collected, and the results showed 163 samples (54.3%) were positive for virus, and 268 isolates were identified. Among these, 75 samples (25%) were positive for enterovirus (EV), but no poliovirus was found. In addition, 92 isolates were identified as enteroviruses and the most common serotypes were coxsackievirus B4, coxsackievirus B3, and coxsackievirus B2. Interestingly, 102 (34%) and 82 (27.3%) specimens were positive for mammalian orthoreovirus (MRV) and adenovirus, respectively. This study confirmed that sewage surveillance can be a useful additional modality for monitoring the possible presence of wild-type or vaccine-derived poliovirus in wastewater, and can indicate the current types of viruses circulating in the population. Furthermore, since MRV was found in children with acute necrotizing encephalopathy and meningitis, the high incidence of MRV detected by environmental surveillance warrants further investigation.
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Affiliation(s)
- Matthew C. Y. Lim
- Department of Medical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan, Taiwan
| | - Ya-Fang Wang
- National Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Tainan, Taiwan
| | - Sheng-Wen Huang
- Center of Infectious Disease and Signaling Research, National Cheng Kung University, Tainan, Taiwan
| | - Jyh-Yuan Yang
- Center for Research, Diagnostics and Vaccine Development, Centers for Disease Control, Ministry of Health and Welfare, Taipei, Taiwan
| | - Jen-Ren Wang
- Department of Medical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan, Taiwan
- Center of Infectious Disease and Signaling Research, National Cheng Kung University, Tainan, Taiwan
- Department of Pathology, National Cheng Kung University Hospital, Tainan, Taiwan
- National Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Tainan, Taiwan
- * E-mail:
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17
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Immunity to polio, measles and rubella in women of child-bearing age and estimated congenital rubella syndrome incidence, Cambodia, 2012. Epidemiol Infect 2014; 143:1858-67. [PMID: 25373419 DOI: 10.1017/s0950268814002817] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
Significant gaps in immunity to polio, measles, and rubella may exist in adults in Cambodia and threaten vaccine-preventable disease (VPD) elimination and control goals, despite high childhood vaccination coverage. We conducted a nationwide serological survey during November-December 2012 of 2154 women aged 15-39 years to assess immunity to polio, measles, and rubella and to estimate congenital rubella syndrome (CRS) incidence. Measles and rubella antibodies were detected by IgG ELISA and polio antibodies by microneutralization testing. Age-structured catalytic models were fitted to rubella serological data to predict CRS cases. Overall, 29.8% of women lacked immunity to at least one poliovirus (PV); seroprevalence to PV1, PV2 and PV3 was 85.9%, 93.4% and 83.3%, respectively. Rubella and measles antibody seroprevalence was 73.3% and 95.9%, respectively. In the 15-19 years age group, 48.2% [95% confidence interval (CI) 42.4-54.1] were susceptible to either PV1 or PV3, and 40.3% (95% CI 33.0-47.5) to rubella virus. Based on rubella antibody seroprevalence, we estimate that >600 infants are born with CRS in Cambodia annually. Significant numbers of Cambodian women are still susceptible to polio and rubella, especially those aged 15-19 years, emphasizing the need to include adults in VPD surveillance and a potential role for vaccination strategies targeted at adults.
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Kamadjeu R, Mahamud A, Webeck J, Baranyikwa MT, Chatterjee A, Bile YN, Birungi J, Mbaeyi C, Mulugeta A. Polio outbreak investigation and response in Somalia, 2013. J Infect Dis 2014; 210 Suppl 1:S181-6. [PMID: 25316834 PMCID: PMC10548859 DOI: 10.1093/infdis/jiu453] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
BACKGROUND For >2 decades, conflicts and recurrent natural disasters have maintained Somalia in a chronic humanitarian crisis. For nearly 5 years, 1 million children <10 years have not had access to lifesaving health services, including vaccination, resulting in the accumulation by 2012 of the largest geographically concentrated cohort of unvaccinated children in the world. This article reviews the epidemiology, risk, and program response to what is now known as the 2013 wild poliovirus (WPV) outbreak in Somalia and highlights the challenges that the program will face in making Somalia free of polio once again. METHODS A case of acute flaccid paralysis (AFP) was defined as a child <15 years of age with sudden onset of fever and paralysis. Polio cases were defined as AFP cases with stool specimens positive for WPV. RESULTS From 9 May to 31 December 2013, 189 cases of WPV type 1 (WPV1) were reported from 46 districts of Somalia; 42% were from Banadir region (Mogadishu), 60% were males, and 93% were <5 years of age. All Somalian polio cases belonged to cluster N5A, which is known to have been circulating in northern Nigeria since 2011. In response to the outbreak, 8 supplementary immunization activities were conducted with oral polio vaccine (OPV; trivalent OPV was used initially, followed subsequently by bivalent OPV) targeting various age groups, including children aged <5 years, children aged <10 years, and individuals of any age. CONCLUSIONS The current polio outbreak erupted after a polio-free period of >6 years (the last case was reported in March 2007). Somalia interrupted indigenous WPV transmission in 2002, was removed from the list of polio-endemic countries a year later, and has since demonstrated its ability to control polio outbreaks resulting from importation. This outbreak reiterates that the threat of large polio outbreaks resulting from WPV importation will remain constant unless polio transmission is interrupted in the remaining polio-endemic countries.
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Affiliation(s)
- Raoul Kamadjeu
- Somalia Liaison, World Health Organization, Nairobi, Kenya
| | - Abdirahman Mahamud
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | - Jenna Webeck
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | | | | | - Yassin Nur Bile
- Health Directorate, Somalia Ministry of Human Development and Public Services, Mogadishu
| | - Julianne Birungi
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
| | - Chukwuma Mbaeyi
- Global Immunization Division, Centers for Disease Control and Prevention, Atlanta, Georgia
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Khetsuriani N, Pfeifer D, Deshevoi S, Gavrilin E, Shefer A, Butler R, Jankovic D, Spataru R, Emiroglu N, Martin R. Challenges of maintaining polio-free status of the European Region. J Infect Dis 2014; 210 Suppl 1:S194-207. [PMID: 25316836 PMCID: PMC10465076 DOI: 10.1093/infdis/jiu096] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/31/2023] Open
Abstract
BACKGROUND The European region, certified as polio free in 2002, had recent wild poliovirus (WPV) introductions, resulting in a major outbreak in Central Asian countries and Russia in 2010 and in current widespread WPV type 1 circulation in Israel, which endangered the polio-free status of the region. METHODS We assessed the data on the major determinants of poliovirus transmission risk (population immunity, surveillance, and outbreak preparedness) and reviewed current threats and measures implemented in response to recent WPV introductions. RESULTS Despite high regional vaccination coverage and functioning surveillance, several countries in the region are at high or intermediate risk of poliovirus transmission. Coverage remains suboptimal in some countries, subnational geographic areas, and population groups, and surveillance (acute flaccid paralysis, enterovirus, and environmental) needs further strengthening. Supplementary immunization activities, which were instrumental in the rapid interruption of WPV1 circulation in 2010, should be implemented in high-risk countries to close population immunity gaps. National polio outbreak preparedness plans need strengthening. Immunization efforts to interrupt WPV transmission in Israel should continue. CONCLUSIONS The European region has successfully maintained its polio-free status since 2002, but numerous challenges remain. Staying polio free will require continued coordinated efforts, political commitment and financial support from all countries.
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Affiliation(s)
| | - Dina Pfeifer
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - Sergei Deshevoi
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - Eugene Gavrilin
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - Abigail Shefer
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - Robb Butler
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - Dragan Jankovic
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - Roman Spataru
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - Nedret Emiroglu
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - Rebecca Martin
- Centers for Disease Control and Prevention, Atlanta, Georgia
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
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Moulsdale HJ, Khetsuriani N, Deshevoi S, Butler R, Simpson J, Salisbury D. Simulation exercises to strengthen polio outbreak preparedness: experience of the World Health Organization European Region. J Infect Dis 2014; 210 Suppl 1:S208-15. [PMID: 25316837 PMCID: PMC10465020 DOI: 10.1093/infdis/jiu120] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
BACKGROUND Poliovirus importations and related outbreaks continue to occur in polio-free countries, including those in the World Health Organization (WHO) European Region. National preparedness plans for responding to poliovirus introduction are insufficient in many countries of the European Region. We describe a series of polio outbreak simulation exercises that were implemented to formally test polio outbreak preparedness plans in the European Region. METHODS We designed and implemented the exercises, reviewed the results, made recommendations, and assessed the role of outbreak simulation exercises in maintaining regional polio-free status. In addition, we performed a comprehensive review of the national plans of all WHO Member States in the European Region. RESULTS Three exercises, delivered during 2011-2013 (for the Balkans, United Kingdom, and the Caucasus and Ukraine), revealed that participating countries were generally prepared for poliovirus introduction, but the level of preparedness needed improvement. The areas in particular need of strengthening were national preparedness plans, initial response, plans for securing vaccine supply, and communications. CONCLUSIONS Polio outbreak simulation exercises can be valuable tools to help maintain polio-free status and should be extended to other high-risk countries and subnational areas in the European Region and elsewhere.
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Affiliation(s)
| | | | - Sergei Deshevoi
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - Robb Butler
- World Health Organization Regional Office for Europe, Copenhagen, Denmark
| | - John Simpson
- Public Health England
- Institute of Psychiatry, King’s College
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Upfill-Brown AM, Lyons HM, Pate MA, Shuaib F, Baig S, Hu H, Eckhoff PA, Chabot-Couture G. Predictive spatial risk model of poliovirus to aid prioritization and hasten eradication in Nigeria. BMC Med 2014; 12:92. [PMID: 24894345 PMCID: PMC4066838 DOI: 10.1186/1741-7015-12-92] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/04/2014] [Accepted: 05/09/2014] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND One of the challenges facing the Global Polio Eradication Initiative is efficiently directing limited resources, such as specially trained personnel, community outreach activities, and satellite vaccinator tracking, to the most at-risk areas to maximize the impact of interventions. A validated predictive model of wild poliovirus circulation would greatly inform prioritization efforts by accurately forecasting areas at greatest risk, thus enabling the greatest effect of program interventions. METHODS Using Nigerian acute flaccid paralysis surveillance data from 2004-2013, we developed a spatial hierarchical Poisson hurdle model fitted within a Bayesian framework to study historical polio caseload patterns and forecast future circulation of type 1 and 3 wild poliovirus within districts in Nigeria. A Bayesian temporal smoothing model was applied to address data sparsity underlying estimates of covariates at the district level. RESULTS We find that calculated vaccine-derived population immunity is significantly negatively associated with the probability and number of wild poliovirus case(s) within a district. Recent case information is significantly positively associated with probability of a case, but not the number of cases. We used lagged indicators and coefficients from the fitted models to forecast reported cases in the subsequent six-month periods. Over the past three years, the average predictive ability is 86 ± 2% and 85 ± 4% for wild poliovirus type 1 and 3, respectively. Interestingly, the predictive accuracy of historical transmission patterns alone is equivalent (86 ± 2% and 84 ± 4% for type 1 and 3, respectively). We calculate uncertainty in risk ranking to inform assessments of changes in rank between time periods. CONCLUSIONS The model developed in this study successfully predicts districts at risk for future wild poliovirus cases in Nigeria. The highest predicted district risk was 12.8 WPV1 cases in 2006, while the lowest district risk was 0.001 WPV1 cases in 2013. Model results have been used to direct the allocation of many different interventions, including political and religious advocacy visits. This modeling approach could be applied to other vaccine preventable diseases for use in other control and elimination programs.
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Dejmek M, Šála M, Plačková P, Hřebabecký H, Mascarell Borredà L, Neyts J, Dračínský M, Procházková E, Jansa P, Leyssen P, Mertlíková-Kaiserová H, Nencka R. Synthesis of Novel Purine-Based Coxsackievirus Inhibitors Bearing Polycylic Substituents at the N-9 Position. Arch Pharm (Weinheim) 2014; 347:478-85. [DOI: 10.1002/ardp.201300431] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2013] [Revised: 01/15/2014] [Accepted: 01/17/2014] [Indexed: 01/23/2023]
Affiliation(s)
- Milan Dejmek
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
| | - Michal Šála
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
| | - Pavla Plačková
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
| | - Hubert Hřebabecký
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
| | - Laura Mascarell Borredà
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
| | - Johan Neyts
- Rega Institute for Medical Research; Leuven Belgium
| | - Martin Dračínský
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
| | - Eliška Procházková
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
| | - Petr Jansa
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
| | | | - Helena Mertlíková-Kaiserová
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
| | - Radim Nencka
- Institute of Organic Chemistry and Biochemistry; Gilead Sciences & IOCB Research Centre; Academy of Sciences of the Czech Republic; Prague Czech Republic
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Duintjer Tebbens RJ, Kalkowska DA, Wassilak SGF, Pallansch MA, Cochi SL, Thompson KM. The potential impact of expanding target age groups for polio immunization campaigns. BMC Infect Dis 2014; 14:45. [PMID: 24472313 PMCID: PMC3918103 DOI: 10.1186/1471-2334-14-45] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2013] [Accepted: 01/20/2014] [Indexed: 12/15/2022] Open
Abstract
BACKGROUND Global efforts to eradicate wild polioviruses (WPVs) continue to face challenges due to uninterrupted endemic WPV transmission in three countries and importation-related outbreaks into previously polio-free countries. We explore the potential role of including older children and adults in supplemental immunization activities (SIAs) to more rapidly increase population immunity and prevent or stop transmission. METHODS We use a differential equation-based dynamic poliovirus transmission model to analyze the epidemiological impact and vaccine resource implications of expanding target age groups in SIAs. We explore the use of older age groups in SIAs for three situations: alternative responses to the 2010 outbreak in Tajikistan, retrospective examination of elimination in two high-risk states in northern India, and prospective and retrospective strategies to accelerate elimination in endemic northwestern Nigeria. Our model recognizes the ability of individuals with waned mucosal immunity (i.e., immunity from a historical live poliovirus infection) to become re-infected and contribute to transmission to a limited extent. RESULTS SIAs involving expanded age groups reduce overall caseloads, decrease transmission, and generally lead to a small reduction in the time to achieve WPV elimination. Analysis of preventive expanded age group SIAs in Tajikistan or prior to type-specific surges in incidence in high-risk areas of India and Nigeria showed the greatest potential benefits of expanded age groups. Analysis of expanded age group SIAs in outbreak situations or to accelerate the interruption of endemic transmission showed relatively less benefit, largely due to the circulation of WPV reaching individuals sooner or more effectively than the SIAs. The India and Nigeria results depend strongly on how well SIAs involving expanded age groups reach relatively isolated subpopulations that sustain clusters of susceptible children, which we assume play a key role in persistent endemic WPV transmission in these areas. CONCLUSIONS This study suggests the need to carefully consider the epidemiological situation in the context of decisions to use expanded age group SIAs. Subpopulations of susceptible individuals may independently sustain transmission, which will reduce the overall benefits associated with using expanded age group SIAs to increase population immunity to a sufficiently high level to stop transmission and reduce the incidence of paralytic cases.
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Thompson KM. Modeling poliovirus risks and the legacy of polio eradication. RISK ANALYSIS : AN OFFICIAL PUBLICATION OF THE SOCIETY FOR RISK ANALYSIS 2013; 33:505-15. [PMID: 23550939 PMCID: PMC7896538 DOI: 10.1111/risa.12030] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
This introduction to the special issue on modeling poliovirus risks provides context about historical efforts to manage polioviruses and reviews the insights from models developed to support risk management and policy development. Following an overview of the contents of the special issue, the introduction explores the road ahead and offers perspective on the legacy of polio eradication.
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