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Casetta I, Crepaldi A, Laudisi M, Baroni A, Gemignani J, Straudi S, Manfredini F, Lamberti N. Variations in Cortical Oxygenation by Near-Infrared Spectroscopy According to Head Position after Acute Stroke: The Preliminary Findings of an Observational Study. J Clin Med 2024; 13:3914. [PMID: 38999480 PMCID: PMC11242420 DOI: 10.3390/jcm13133914] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2024] [Revised: 06/24/2024] [Accepted: 07/02/2024] [Indexed: 07/14/2024] Open
Abstract
Background: After ischemic stroke, there is no general consensus on the optimal position for the head of patients in the acute phase. This observational study aimed to measure the variations in cortical oxygenation using noninvasive functional near-infrared spectroscopy (fNIRS) at different degrees of head positioning on a bed. Methods: Consecutive ischemic stroke patients aged 18 years or older with anterior circulation ischemic stroke within 48 h of symptom onset who could safely assume different positions on a bed were included. A 48-channel fNIRS system was placed in the bilateral sensorimotor cortex. Then, the bed of each patient was moved into four consecutive positions: (1) seated (90° angle between the head and bed surface); (2) lying at 30°; (3) seated again (90°); and (4) lying flat (0°). Each position was maintained for 90 s; the test was conducted 48 h after stroke onset and after 5 ± 1 days. The variations in oxygenated hemoglobin in the global brain surface and for each hemisphere were recorded and compared. Results: Twenty-one patients were included (males, n = 11; age, 79 ± 9 years; ASPECTS, 8 ± 2). When evaluating the affected side, the median oxygenation was significantly greater in the lying-flat (0°) and 30° positions than in the 90° position (p < 0.001 for both comparisons). No significant differences between the supine position and the 30° position were found, although oxygenation was slightly lower in the 30° position than in the supine position (p = 0.063). No differences were observed when comparing recanalized and nonrecanalized patients separately or according to stroke severity. The evaluation conducted 5 days after the stroke confirmed the previous data, with a significant difference in oxygenation at 0° and 30° compared to 90°. Conclusions: This preliminary study suggested that there are no substantial differences in brain oxygenation between the lying-flat head position and the 30° laying position.
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Affiliation(s)
| | - Anna Crepaldi
- Unit of Nephrology, University Hospital of Ferrara, 44124 Ferrara, Italy;
| | - Michele Laudisi
- Unit of Neurology, University Hospital of Ferrara, 44124 Ferrara, Italy;
| | - Andrea Baroni
- Unit of Rehabilitation Medicine, University Hospital of Ferrara, 44124 Ferrara, Italy; (A.B.); (S.S.)
- Department of Neuroscience and Rehabilitation, University of Ferrara, 44124 Ferrara, Italy;
| | - Jessica Gemignani
- Department of Developmental Psychology and Socialization, University of Padova, 35131 Padova, Italy;
| | - Sofia Straudi
- Unit of Rehabilitation Medicine, University Hospital of Ferrara, 44124 Ferrara, Italy; (A.B.); (S.S.)
- Department of Neuroscience and Rehabilitation, University of Ferrara, 44124 Ferrara, Italy;
| | - Fabio Manfredini
- Department of Neuroscience and Rehabilitation, University of Ferrara, 44124 Ferrara, Italy;
- Program of Vascular Rehabilitation and Exercise Medicine, University Hospital of Ferrara, 44124 Ferrara, Italy
| | - Nicola Lamberti
- Department of Neuroscience and Rehabilitation, University of Ferrara, 44124 Ferrara, Italy;
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Shali RK, Setarehdan SK, Seifi B. Functional near-infrared spectroscopy based blood pressure variations and hemodynamic activity of brain monitoring following postural changes: A systematic review. Physiol Behav 2024; 281:114574. [PMID: 38697274 DOI: 10.1016/j.physbeh.2024.114574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Revised: 04/03/2024] [Accepted: 04/26/2024] [Indexed: 05/04/2024]
Abstract
Postural change from supine or sitting to standing up leads to displacement of 300 to 1000 mL of blood from the central parts of the body to the lower limb, which causes a decrease in venous return to the heart, hence decrease in cardiac output, causing a drop in blood pressure. This may lead to falling down, syncope, and in general reducing the quality of daily activities, especially in the elderly and anyone suffering from nervous system disorders such as Parkinson's or orthostatic hypotension (OH). Among different modalities to study brain function, functional near-infrared spectroscopy (fNIRS) is a neuroimaging method that optically measures the hemodynamic response in brain tissue. Concentration changes in oxygenated hemoglobin (HbO2) and deoxygenated hemoglobin (HHb) are associated with brain neural activity. fNIRS is significantly more tolerant to motion artifacts compared to fMRI, PET, and EEG. At the same time, it is portable, has a simple structure and usage, is safer, and much more economical. In this article, we systematically reviewed the literature to examine the history of using fNIRS in monitoring brain oxygenation changes caused by sudden changes in body position and its relationship with the blood pressure changes. First, the theory behind brain hemodynamics monitoring using fNIRS and its advantages and disadvantages are presented. Then, a study of blood pressure variations as a result of postural changes using fNIRS is described. It is observed that only 58 % of the references concluded a positive correlation between brain oxygenation changes and blood pressure changes. At the same time, 3 % showed a negative correlation, and 39 % did not show any correlation between them.
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Affiliation(s)
- Roya Kheyrkhah Shali
- School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran.
| | - Seyed Kamaledin Setarehdan
- School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran
| | - Behjat Seifi
- Faculty of Medical Science, University of Tehran, Tehran, Iran
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Klein F. Optimizing spatial specificity and signal quality in fNIRS: an overview of potential challenges and possible options for improving the reliability of real-time applications. FRONTIERS IN NEUROERGONOMICS 2024; 5:1286586. [PMID: 38903906 PMCID: PMC11188482 DOI: 10.3389/fnrgo.2024.1286586] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Accepted: 04/29/2024] [Indexed: 06/22/2024]
Abstract
The optical brain imaging method functional near-infrared spectroscopy (fNIRS) is a promising tool for real-time applications such as neurofeedback and brain-computer interfaces. Its combination of spatial specificity and mobility makes it particularly attractive for clinical use, both at the bedside and in patients' homes. Despite these advantages, optimizing fNIRS for real-time use requires careful attention to two key aspects: ensuring good spatial specificity and maintaining high signal quality. While fNIRS detects superficial cortical brain regions, consistently and reliably targeting specific regions of interest can be challenging, particularly in studies that require repeated measurements. Variations in cap placement coupled with limited anatomical information may further reduce this accuracy. Furthermore, it is important to maintain good signal quality in real-time contexts to ensure that they reflect the true underlying brain activity. However, fNIRS signals are susceptible to contamination by cerebral and extracerebral systemic noise as well as motion artifacts. Insufficient real-time preprocessing can therefore cause the system to run on noise instead of brain activity. The aim of this review article is to help advance the progress of fNIRS-based real-time applications. It highlights the potential challenges in improving spatial specificity and signal quality, discusses possible options to overcome these challenges, and addresses further considerations relevant to real-time applications. By addressing these topics, the article aims to help improve the planning and execution of future real-time studies, thereby increasing their reliability and repeatability.
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Affiliation(s)
- Franziska Klein
- Biomedical Devices and Systems Group, R&D Division Health, OFFIS - Institute for Information Technology, Oldenburg, Germany
- Department of Psychiatry, Psychotherapy and Psychosomatics, Medical School, RWTH Aachen University, Aachen, Germany
- Neurocognition and Functional Neurorehabilitation Group, Department of Psychology, University of Oldenburg, Oldenburg, Germany
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4
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Bonnaire J, Dumas G, Cassell J. Bringing together multimodal and multilevel approaches to study the emergence of social bonds between children and improve social AI. FRONTIERS IN NEUROERGONOMICS 2024; 5:1290256. [PMID: 38827377 PMCID: PMC11140154 DOI: 10.3389/fnrgo.2024.1290256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Accepted: 04/29/2024] [Indexed: 06/04/2024]
Abstract
This protocol paper outlines an innovative multimodal and multilevel approach to studying the emergence and evolution of how children build social bonds with their peers, and its potential application to improving social artificial intelligence (AI). We detail a unique hyperscanning experimental framework utilizing functional near-infrared spectroscopy (fNIRS) to observe inter-brain synchrony in child dyads during collaborative tasks and social interactions. Our proposed longitudinal study spans middle childhood, aiming to capture the dynamic development of social connections and cognitive engagement in naturalistic settings. To do so we bring together four kinds of data: the multimodal conversational behaviors that dyads of children engage in, evidence of their state of interpersonal rapport, collaborative performance on educational tasks, and inter-brain synchrony. Preliminary pilot data provide foundational support for our approach, indicating promising directions for identifying neural patterns associated with productive social interactions. The planned research will explore the neural correlates of social bond formation, informing the creation of a virtual peer learning partner in the field of Social Neuroergonomics. This protocol promises significant contributions to understanding the neural basis of social connectivity in children, while also offering a blueprint for designing empathetic and effective social AI tools, particularly for educational contexts.
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Affiliation(s)
| | - Guillaume Dumas
- Research Center of the CHU Sainte-Justine, Department of Psychiatry, University of Montréal, Montreal, QC, Canada
- Mila–Quebec Artificial Intelligence Institute, Montreal, QC, Canada
| | - Justine Cassell
- Inria Paris Centre, Paris, France
- School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, United States
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5
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Schulthess S, Friedl S, Narula G, Brandi G, Willms JF, Keller E, Bicciato G. Low frequency oscillations reflect neurovascular coupling and disappear after cerebral death. Sci Rep 2024; 14:11287. [PMID: 38760449 PMCID: PMC11101423 DOI: 10.1038/s41598-024-61819-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Accepted: 05/09/2024] [Indexed: 05/19/2024] Open
Abstract
Spectrum power analysis in the low frequency oscillations (LFO) region of functional near infrared spectroscopy (fNIRS) is a promising method to deliver information about brain activation and therefore might be used for prognostication in patients with disorders of consciousness in the neurocritical care unit alongside with established methods. In this study, we measure the cortical hemodynamic response measured by fNIRS in the LFO region following auditory and somatosensory stimulation in healthy subjects. The significant hemodynamic reaction in the contralateral hemisphere correlation with the physiologic electric response suggests neurovascular coupling. In addition, we investigate power spectrum changes in steady state measurements of cerebral death patients and healthy subjects in the LFO region, the frequency of the heartbeat and respiration. The spectral power within the LFO region was lower in the patients with cerebral death compared to the healthy subjects, whereas there were no differences in spectral power for physiological activities such as heartbeat and respiration rate. This finding indicates the cerebral origin of our low frequency measurements. Therefore, LFO measurements are a potential method to detect brain activation in patients with disorders of consciousness and cerebral death. However, further studies in patients are needed to investigate its potential clinical use.
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Affiliation(s)
- Sven Schulthess
- Neurocritical Care Unit, Department of Neurosurgery, Institute of Intensive Care Medicine, University Hospital, University of Zurich, 8091, Zurich, Switzerland.
| | - Susanne Friedl
- Neurocritical Care Unit, Department of Neurosurgery, Institute of Intensive Care Medicine, University Hospital, University of Zurich, 8091, Zurich, Switzerland
| | - Gagan Narula
- Neurocritical Care Unit, Department of Neurosurgery, Institute of Intensive Care Medicine, University Hospital, University of Zurich, 8091, Zurich, Switzerland
| | - Giovanna Brandi
- Neurocritical Care Unit, Department of Neurosurgery, Institute of Intensive Care Medicine, University Hospital, University of Zurich, 8091, Zurich, Switzerland
| | - Jan Folkard Willms
- Neurocritical Care Unit, Department of Neurosurgery, Institute of Intensive Care Medicine, University Hospital, University of Zurich, 8091, Zurich, Switzerland
| | - Emanuela Keller
- Neurocritical Care Unit, Department of Neurosurgery, Institute of Intensive Care Medicine, University Hospital, University of Zurich, 8091, Zurich, Switzerland
| | - Giulio Bicciato
- Department of Neurology, University Hospital Zurich, University of Zurich, 8091, Zurich, Switzerland
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Srinivasan S, Acharya D, Butters E, Collins-Jones L, Mancini F, Bale G. Subject-specific information enhances spatial accuracy of high-density diffuse optical tomography. FRONTIERS IN NEUROERGONOMICS 2024; 5:1283290. [PMID: 38444841 PMCID: PMC10910052 DOI: 10.3389/fnrgo.2024.1283290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Accepted: 02/02/2024] [Indexed: 03/07/2024]
Abstract
Functional near-infrared spectroscopy (fNIRS) is a widely used imaging method for mapping brain activation based on cerebral hemodynamics. The accurate quantification of cortical activation using fNIRS data is highly dependent on the ability to correctly localize the positions of light sources and photodetectors on the scalp surface. Variations in head size and shape across participants greatly impact the precise locations of these optodes and consequently, the regions of the cortical surface being reached. Such variations can therefore influence the conclusions drawn in NIRS studies that attempt to explore specific cortical regions. In order to preserve the spatial identity of each NIRS channel, subject-specific differences in NIRS array registration must be considered. Using high-density diffuse optical tomography (HD-DOT), we have demonstrated the inter-subject variability of the same HD-DOT array applied to ten participants recorded in the resting state. We have also compared three-dimensional image reconstruction results obtained using subject-specific positioning information to those obtained using generic optode locations. To mitigate the error introduced by using generic information for all participants, photogrammetry was used to identify specific optode locations per-participant. The present work demonstrates the large variation between subjects in terms of which cortical parcels are sampled by equivalent channels in the HD-DOT array. In particular, motor cortex recordings suffered from the largest optode localization errors, with a median localization error of 27.4 mm between generic and subject-specific optodes, leading to large differences in parcel sensitivity. These results illustrate the importance of collecting subject-specific optode locations for all wearable NIRS experiments, in order to perform accurate group-level analysis using cortical parcellation.
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Affiliation(s)
- Sruthi Srinivasan
- Department of Engineering, University of Cambridge, Cambridge, United Kingdom
| | - Deepshikha Acharya
- Department of Engineering, University of Cambridge, Cambridge, United Kingdom
| | - Emilia Butters
- Department of Engineering, University of Cambridge, Cambridge, United Kingdom
- Department of Psychiatry, University of Cambridge, Cambridge, United Kingdom
| | - Liam Collins-Jones
- Department of Medical Physics and Biomedical Engineering, University College London, London, United Kingdom
- Department of Clinical Neurosciences, University of Cambridge, Cambridge, United Kingdom
| | - Flavia Mancini
- Department of Engineering, University of Cambridge, Cambridge, United Kingdom
| | - Gemma Bale
- Department of Engineering, University of Cambridge, Cambridge, United Kingdom
- Department of Physics, University of Cambridge, Cambridge, United Kingdom
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7
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Tang L, Kebaya LMN, Altamimi T, Kowalczyk A, Musabi M, Roychaudhuri S, Vahidi H, Meyerink P, de Ribaupierre S, Bhattacharya S, de Moraes LTAR, St Lawrence K, Duerden EG. Altered resting-state functional connectivity in newborns with hypoxic ischemic encephalopathy assessed using high-density functional near-infrared spectroscopy. Sci Rep 2024; 14:3176. [PMID: 38326455 PMCID: PMC10850364 DOI: 10.1038/s41598-024-53256-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Accepted: 01/30/2024] [Indexed: 02/09/2024] Open
Abstract
Hypoxic-ischemic encephalopathy (HIE) results from a lack of oxygen to the brain during the perinatal period. HIE can lead to mortality and various acute and long-term morbidities. Improved bedside monitoring methods are needed to identify biomarkers of brain health. Functional near-infrared spectroscopy (fNIRS) can assess resting-state functional connectivity (RSFC) at the bedside. We acquired resting-state fNIRS data from 21 neonates with HIE (postmenstrual age [PMA] = 39.96), in 19 neonates the scans were acquired post-therapeutic hypothermia (TH), and from 20 term-born healthy newborns (PMA = 39.93). Twelve HIE neonates also underwent resting-state functional magnetic resonance imaging (fMRI) post-TH. RSFC was calculated as correlation coefficients amongst the time courses for fNIRS and fMRI data, respectively. The fNIRS and fMRI RSFC maps were comparable. RSFC patterns were then measured with graph theory metrics and compared between HIE infants and healthy controls. HIE newborns showed significantly increased clustering coefficients, network efficiency and modularity compared to controls. Using a support vector machine algorithm, RSFC features demonstrated good performance in classifying the HIE and healthy newborns in separate groups. Our results indicate the utility of fNIRS-connectivity patterns as potential biomarkers for HIE and fNIRS as a new bedside tool for newborns with HIE.
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Affiliation(s)
- Lingkai Tang
- Biomedical Engineering, Faculty of Engineering, Western University, London, ON, Canada
| | - Lilian M N Kebaya
- Neuroscience, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
- Neonatal-Perinatal Medicine, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
- Department of Paediatrics, Division of Neonatal-Perinatal Medicine, Temerty Faculty of Medicine, University of Toronto, Toronto, ON, Canada
| | - Talal Altamimi
- Neonatal-Perinatal Medicine, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
| | - Alexandra Kowalczyk
- Neonatal-Perinatal Medicine, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
| | - Melab Musabi
- Neonatal-Perinatal Medicine, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
| | - Sriya Roychaudhuri
- Neonatal-Perinatal Medicine, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
| | - Homa Vahidi
- Neuroscience, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
| | - Paige Meyerink
- Neonatal-Perinatal Medicine, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
| | - Sandrine de Ribaupierre
- Neuroscience, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
- Clinical Neurological Sciences, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
| | - Soume Bhattacharya
- Neonatal-Perinatal Medicine, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
| | | | - Keith St Lawrence
- Biomedical Engineering, Faculty of Engineering, Western University, London, ON, Canada
- Medical Biophysics, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada
| | - Emma G Duerden
- Biomedical Engineering, Faculty of Engineering, Western University, London, ON, Canada.
- Neuroscience, Schulich Faculty of Medicine and Dentistry, Western University, London, ON, Canada.
- Applied Psychology, Faculty of Education, Western University, 1137 Western Rd, London, ON, N6G 1G7, Canada.
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Shin JH, Kang MJ, Lee SA. Wearable functional near-infrared spectroscopy for measuring dissociable activation dynamics of prefrontal cortex subregions during working memory. Hum Brain Mapp 2024; 45:e26619. [PMID: 38339822 PMCID: PMC10858338 DOI: 10.1002/hbm.26619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 01/18/2024] [Accepted: 01/22/2024] [Indexed: 02/12/2024] Open
Abstract
The prefrontal cortex (PFC) has been extensively studied in relation to various cognitive abilities, including executive function, attention, and memory. Nevertheless, there is a gap in our scientific knowledge regarding the functionally dissociable neural dynamics across the PFC during a cognitive task and their individual differences in performance. Here, we explored this possibility using a delayed match-to-sample (DMTS) working memory (WM) task using NIRSIT, a high-density, wireless, wearable functional near-infrared spectroscopy (fNIRS) system. First, upon presentation of the sample stimulus, we observed an immediate signal increase in the ventral (orbitofrontal) region of the anterior PFC, followed by activity in the dorsolateral PFC. After the DMTS test stimulus appeared, the orbitofrontal cortex activated once again, while the rest of the PFC showed overall disengagement. Individuals with higher accuracy showed earlier and sustained activation of the PFC across the trial. Furthermore, higher network efficiency and functional connectivity in the PFC were correlated with individual WM performance. Our study sheds new light on the dynamics of PFC subregional activity during a cognitive task and its potential applicability in explaining individual differences in experimental, educational, or clinical populations. PRACTITIONER POINTS: Wearable functional near-infrared spectroscopy (fNIRS) captured dissociable temporal dynamics across prefrontal subregions during a delayed match-to-sample task. Anterior regions of the orbitofrontal cortex (OFC) activated first during the delay period, followed by the dorsolateral prefrontal cortex (PFC). PFC disengaged overall after the delay, but the OFC reactivated to the test stimulus. Earlier and sustained activation of PFC was associated with better accuracy. Functional connectivity and network efficiency also varied with task performance.
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Affiliation(s)
- Jung Han Shin
- Program of Brain and Cognitive EngineeringKorea Advanced Institute of Science and Technology (KAIST)DaejeonSouth Korea
- Department of Brain and Cognitive SciencesSeoul National UniversitySeoulSouth Korea
| | - Min Jun Kang
- Department of Bio and Brain EngineeringKorea Advanced Institute of Science and Technology (KAIST)DaejeonSouth Korea
| | - Sang Ah Lee
- Department of Brain and Cognitive SciencesSeoul National UniversitySeoulSouth Korea
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9
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Borgheai SB, Zisk AH, McLinden J, Mcintyre J, Sadjadi R, Shahriari Y. Multimodal pre-screening can predict BCI performance variability: A novel subject-specific experimental scheme. Comput Biol Med 2024; 168:107658. [PMID: 37984201 DOI: 10.1016/j.compbiomed.2023.107658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Revised: 10/20/2023] [Accepted: 10/31/2023] [Indexed: 11/22/2023]
Abstract
BACKGROUND Brain-computer interface (BCI) systems currently lack the required robustness for long-term daily use due to inter- and intra-subject performance variability. In this study, we propose a novel personalized scheme for a multimodal BCI system, primarily using functional near-infrared spectroscopy (fNIRS) and electroencephalography (EEG), to identify, predict, and compensate for factors affecting competence-related and interfering factors associated with performance. METHOD 11 (out of 13 recruited) participants, including five participants with motor deficits, completed four sessions on average. During the training sessions, the subjects performed a short pre-screening phase, followed by three variations of a novel visou-mental (VM) protocol. Features extracted from the pre-screening phase were used to construct predictive platforms using stepwise multivariate linear regression (MLR) models. In the test sessions, we employed a task-correction phase where our predictive models were used to predict the ideal task variation to maximize performance, followed by an interference-correction phase. We then investigated the associations between predicted and actual performances and evaluated the outcome of correction strategies. RESULT The predictive models resulted in respective adjusted R-squared values of 0.942, 0.724, and 0.939 for the first, second, and third variation of the task, respectively. The statistical analyses showed significant associations between the performances predicted by predictive models and the actual performances for the first two task variations, with rhos of 0.7289 (p-value = 0.011) and 0.6970 (p-value = 0.017), respectively. For 81.82 % of the subjects, the task/workload correction stage correctly determined which task variation provided the highest accuracy, with an average performance gain of 5.18 % when applying the correction strategies. CONCLUSION Our proposed method can lead to an integrated multimodal predictive framework to compensate for BCI performance variability, particularly, for people with severe motor deficits.
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Affiliation(s)
- Seyyed Bahram Borgheai
- Department of Electrical, Computer, and Biomedical Engineering, University of Rhode Island, Kingston, RI, United States; Neurology Department, Emory University, Atlanta, GA, United States
| | - Alyssa Hillary Zisk
- Interdisciplinary Neuroscience Program, University of Rhode Island, Kingston, RI, United States
| | - John McLinden
- Department of Electrical, Computer, and Biomedical Engineering, University of Rhode Island, Kingston, RI, United States
| | - James Mcintyre
- Department of Electrical, Computer, and Biomedical Engineering, University of Rhode Island, Kingston, RI, United States
| | - Reza Sadjadi
- Neurology Department, Massachusetts General Hospital, Boston, MA, United States
| | - Yalda Shahriari
- Department of Electrical, Computer, and Biomedical Engineering, University of Rhode Island, Kingston, RI, United States; Interdisciplinary Neuroscience Program, University of Rhode Island, Kingston, RI, United States.
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10
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Peng K, Karunakaran KD, Green S, Borsook D. Machines, mathematics, and modules: the potential to provide real-time metrics for pain under anesthesia. NEUROPHOTONICS 2024; 11:010701. [PMID: 38389718 PMCID: PMC10883389 DOI: 10.1117/1.nph.11.1.010701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 01/08/2024] [Accepted: 01/16/2024] [Indexed: 02/24/2024]
Abstract
The brain-based assessments under anesthesia have provided the ability to evaluate pain/nociception during surgery and the potential to prevent long-term evolution of chronic pain. Prior studies have shown that the functional near-infrared spectroscopy (fNIRS)-measured changes in cortical regions such as the primary somatosensory and the polar frontal cortices show consistent response to evoked and ongoing pain in awake, sedated, and anesthetized patients. We take this basic approach and integrate it into a potential framework that could provide real-time measures of pain/nociception during the peri-surgical period. This application could have significant implications for providing analgesia during surgery, a practice that currently lacks quantitative evidence to guide patient tailored pain management. Through a simple readout of "pain" or "no pain," the proposed system could diminish or eliminate levels of intraoperative, early post-operative, and potentially, the transition to chronic post-surgical pain. The system, when validated, could also be applied to measures of analgesic efficacy in the clinic.
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Affiliation(s)
- Ke Peng
- University of Manitoba, Department of Electrical and Computer Engineering, Price Faculty of Engineering, Winnipeg, Manitoba, Canada
| | - Keerthana Deepti Karunakaran
- Massachusetts General Hospital, Harvard Medical School, Department of Psychiatry, Boston, Massachusetts, United States
| | - Stephen Green
- Massachusetts Institute of Technology, Department of Mechanical Engineering, Boston, Massachusetts, United States
| | - David Borsook
- Massachusetts General Hospital, Harvard Medical School, Department of Psychiatry, Boston, Massachusetts, United States
- Massachusetts General Hospital, Harvard Medical School, Department of Radiology, Boston, Massachusetts, United States
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11
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Fazliazar E, Sudakou A, Sawosz P, Gerega A, Kacprzak M, Liebert A. Depth-selective method for time-domain diffuse reflectance measurements: validation study of the dual subtraction technique. BIOMEDICAL OPTICS EXPRESS 2023; 14:6233-6249. [PMID: 38420319 PMCID: PMC10898577 DOI: 10.1364/boe.497671] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Revised: 08/18/2023] [Accepted: 08/28/2023] [Indexed: 03/02/2024]
Abstract
Research on the spatial distribution of sensitivity of time-domain near infrared diffuse reflectance measurement is reported in this paper. The main objective of the investigation is to validate theoretically calculated sensitivity profiles for a measurement geometry with two detectors and two sources in which sensitivity profiles of statistical moments of distributions of time of flight of photons (DTOFs) are spatially restricted to a region underneath the detectors. For this dual subtraction method, smaller sensitivities to changes appearing in the superficial layer of the medium were observed compared to the single distance and single subtraction methods. Experimental validation of this approach is based on evaluation of changes in the statistical moments of DTOFs measured on a liquid phantom with local absorption perturbations. The spatial distributions of sensitivities, depth-related sensitivity and depth selectivities were obtained from the dual subtraction method and compared with those from single distance and single subtraction approaches. Also, the contrast to noise ratio (CNR) was calculated for the dual subtraction technique and combined with depth selectivity in order to assess the overall performance (product of CNR and depth selectivity) of the method. Spatial sensitivity profiles from phantom experiments are in a good agreement with the results of theoretical studies and feature more locally restricted sensitivity volume with the point of maximal sensitivity located deeper. The highest value of overall performance was obtained experimentally for the second statistical moment in the dual subtraction method (∼10.8) surpassing that of the single distance method (∼8.7). This confirms the advantage of dual subtraction measurement geometries in the suppression of optical signals originated in the superficial layer of the medium.
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Affiliation(s)
- Elham Fazliazar
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Warsaw, Poland
| | - Aleh Sudakou
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Warsaw, Poland
| | - Piotr Sawosz
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Warsaw, Poland
| | - Anna Gerega
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Warsaw, Poland
| | - Michal Kacprzak
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Warsaw, Poland
| | - Adam Liebert
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Warsaw, Poland
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12
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Vorreuther A, Bastian L, Benitez Andonegui A, Evenblij D, Riecke L, Lührs M, Sorger B. It takes two (seconds): decreasing encoding time for two-choice functional near-infrared spectroscopy brain-computer interface communication. NEUROPHOTONICS 2023; 10:045005. [PMID: 37928600 PMCID: PMC10620514 DOI: 10.1117/1.nph.10.4.045005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/15/2023] [Revised: 07/25/2023] [Accepted: 08/18/2023] [Indexed: 11/07/2023]
Abstract
Significance Brain-computer interfaces (BCIs) can provide severely motor-impaired patients with a motor-independent communication channel. Functional near-infrared spectroscopy (fNIRS) constitutes a promising BCI-input modality given its high mobility, safety, user comfort, cost-efficiency, and relatively low motion sensitivity. Aim The present study aimed at developing an efficient and convenient two-choice fNIRS communication BCI by implementing a relatively short encoding time (2 s), considerably increasing communication speed, and decreasing the cognitive load of BCI users. Approach To encode binary answers to 10 biographical questions, 10 healthy adults repeatedly performed a combined motor-speech imagery task within 2 different time windows guided by auditory instructions. Each answer-encoding run consisted of 10 trials. Answers were decoded during the ongoing experiment from the time course of the individually identified most-informative fNIRS channel-by-chromophore combination. Results The answers of participants were decoded online with an accuracy of 85.8% (run-based group mean). Post-hoc analysis yielded an average single-trial accuracy of 68.1%. Analysis of the effect of number of trial repetitions showed that the best information-transfer rate could be obtained by combining four encoding trials. Conclusions The study demonstrates that an encoding time as short as 2 s can enable immediate, efficient, and convenient fNIRS-BCI communication.
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Affiliation(s)
- Anna Vorreuther
- Maastricht University, Department of Cognitive Neuroscience, Maastricht, The Netherlands
- University of Stuttgart, Institute of Human Factors and Technology Management IAT, Applied Neurocognitive Systems, Stuttgart, Germany
| | - Lisa Bastian
- Maastricht University, Department of Cognitive Neuroscience, Maastricht, The Netherlands
- University of Tübingen, Institute of Medical Psychology and Behavioral Neurobiology, Tübingen, Germany
- International Max Planck Research School, Graduate Training Centre of Neuroscience, Tübingen, Germany
| | - Amaia Benitez Andonegui
- Maastricht University, Department of Cognitive Neuroscience, Maastricht, The Netherlands
- NIH, MEG Core Facility National Institute of Mental Health, Bethesda, Maryland, United States
| | - Danielle Evenblij
- Maastricht University, Department of Cognitive Neuroscience, Maastricht, The Netherlands
| | - Lars Riecke
- Maastricht University, Department of Cognitive Neuroscience, Maastricht, The Netherlands
| | - Michael Lührs
- Maastricht University, Department of Cognitive Neuroscience, Maastricht, The Netherlands
- Brain Innovation B.V., Research Department, Maastricht, The Netherlands
| | - Bettina Sorger
- Maastricht University, Department of Cognitive Neuroscience, Maastricht, The Netherlands
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13
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Schroeder PA, Artemenko C, Kosie JE, Cockx H, Stute K, Pereira J, Klein F, Mehler DMA. Using preregistration as a tool for transparent fNIRS study design. NEUROPHOTONICS 2023; 10:023515. [PMID: 36908680 PMCID: PMC9993433 DOI: 10.1117/1.nph.10.2.023515] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/09/2022] [Accepted: 01/11/2023] [Indexed: 05/04/2023]
Abstract
Significance The expansion of functional near-infrared spectroscopy (fNIRS) methodology and analysis tools gives rise to various design and analytical decisions that researchers have to make. Several recent efforts have developed guidelines for preprocessing, analyzing, and reporting practices. For the planning stage of fNIRS studies, similar guidance is desirable. Study preregistration helps researchers to transparently document study protocols before conducting the study, including materials, methods, and analyses, and thus, others to verify, understand, and reproduce a study. Preregistration can thus serve as a useful tool for transparent, careful, and comprehensive fNIRS study design. Aim We aim to create a guide on the design and analysis steps involved in fNIRS studies and to provide a preregistration template specified for fNIRS studies. Approach The presented preregistration guide has a strong focus on fNIRS specific requirements, and the associated template provides examples based on continuous-wave (CW) fNIRS studies conducted in humans. These can, however, be extended to other types of fNIRS studies. Results On a step-by-step basis, we walk the fNIRS user through key methodological and analysis-related aspects central to a comprehensive fNIRS study design. These include items specific to the design of CW, task-based fNIRS studies, but also sections that are of general importance, including an in-depth elaboration on sample size planning. Conclusions Our guide introduces these open science tools to the fNIRS community, providing researchers with an overview of key design aspects and specification recommendations for comprehensive study planning. As such it can be used as a template to preregister fNIRS studies or merely as a tool for transparent fNIRS study design.
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Affiliation(s)
- Philipp A. Schroeder
- University of Tuebingen, Department of Psychology, Faculty of Science, Tuebingen, Germany
| | - Christina Artemenko
- University of Tuebingen, Department of Psychology, Faculty of Science, Tuebingen, Germany
| | - Jessica E. Kosie
- Princeton University, Social and Natural Sciences, Department of Psychology, Princeton, New Jersey, United States
| | - Helena Cockx
- Radboud University, Donders Institute for Brain, Cognition and Behaviour, Biophysics Department, Faculty of Science, Nijmegen, The Netherlands
| | - Katharina Stute
- Chemnitz University of Technology, Institute of Human Movement Science and Health, Faculty of Behavioural and Social Sciences, Chemnitz, Germany
| | - João Pereira
- University of Coimbra, Coimbra Institute for Biomedical Imaging and Translational Research, Coimbra, Portugal
| | - Franziska Klein
- University of Oldenburg, Department of Psychology, Neurocognition and functional Neurorehabilitation Group, Oldenburg (Oldb), Germany
- RWTH Aachen University, Medical School, Department of Psychiatry, Psychotherapy and Psychosomatics, Aachen, Germany
| | - David M. A. Mehler
- RWTH Aachen University, Medical School, Department of Psychiatry, Psychotherapy and Psychosomatics, Aachen, Germany
- University of Münster, Institute for Translational Psychiatry, Medical School, Münster, Germany
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14
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Phillips V Z, Canoy RJ, Paik SH, Lee SH, Kim BM. Functional Near-Infrared Spectroscopy as a Personalized Digital Healthcare Tool for Brain Monitoring. J Clin Neurol 2023; 19:115-124. [PMID: 36854332 PMCID: PMC9982178 DOI: 10.3988/jcn.2022.0406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Revised: 11/17/2022] [Accepted: 11/18/2022] [Indexed: 03/02/2023] Open
Abstract
The sustained growth of digital healthcare in the field of neurology relies on portable and cost-effective brain monitoring tools that can accurately monitor brain function in real time. Functional near-infrared spectroscopy (fNIRS) is one such tool that has become popular among researchers and clinicians as a practical alternative to functional magnetic resonance imaging, and as a complementary tool to modalities such as electroencephalography. This review covers the contribution of fNIRS to the personalized goals of digital healthcare in neurology by identifying two major trends that drive current fNIRS research. The first major trend is multimodal monitoring using fNIRS, which allows clinicians to access more data that will help them to understand the interconnection between the cerebral hemodynamics and other physiological phenomena in patients. This allows clinicians to make an overall assessment of physical health to obtain a more-detailed and individualized diagnosis. The second major trend is that fNIRS research is being conducted with naturalistic experimental paradigms that involve multisensory stimulation in familiar settings. Cerebral monitoring of multisensory stimulation during dynamic activities or within virtual reality helps to understand the complex brain activities that occur in everyday life. Finally, the scope of future fNIRS studies is discussed to facilitate more-accurate assessments of brain activation and the wider clinical acceptance of fNIRS as a medical device for digital healthcare.
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Affiliation(s)
- Zephaniah Phillips V
- Global Health Technology Research Center, College of Health Science, Korea University, Seoul, Korea.
| | - Raymart Jay Canoy
- Program in Biomicro System Technology, College of Engineering, Korea University, Seoul, Korea
| | - Seung-ho Paik
- Global Health Technology Research Center, College of Health Science, Korea University, Seoul, Korea.,KLIEN Inc., Seoul Biohub, Seoul, Korea
| | - Seung Hyun Lee
- Interdisciplinary Program in Precision Public Health, Korea University, Seoul, Korea
| | - Beop-Min Kim
- Department of Bio-Convergence Engineering, Korea University, Seoul, Korea
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15
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Zhao M, Zhou W, Aparanji S, Mazumder D, Srinivasan VJ. Interferometric diffusing wave spectroscopy imaging with an electronically variable time-of-flight filter. OPTICA 2023; 10:42-52. [PMID: 37275218 PMCID: PMC10238083 DOI: 10.1364/optica.472471] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Accepted: 11/09/2022] [Indexed: 06/07/2023]
Abstract
Diffuse optics (DO) is a light-based technique used to study the human brain, but it suffers from low brain specificity. Interferometric diffuse optics (iDO) promises to improve the quantitative accuracy and depth specificity of DO, and particularly, coherent light fluctuations (CLFs) arising from blood flow. iDO techniques have alternatively achieved either time-of-flight (TOF) discrimination or highly parallel detection, but not both at once. Here, we break this barrier with a single iDO instrument. Specifically, we show that rapid tuning of a temporally coherent laser during the sensor integration time increases the effective linewidth seen by a highly parallel interferometer. Using this concept to create a continuously variable and user-specified TOF filter, we demonstrate a solution to the canonical problem of DO, measuring optical properties. Then, with a deep TOF filter, we reduce scalp sensitivity of CLFs by 2.7 times at 1 cm source-collector separation. With this unique combination of desirable features, i.e., TOF-discrimination, spatial localization, and highly parallel CLF detection, we perform multiparametric imaging of light intensities and CLFs via the human forehead.
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Affiliation(s)
- Mingjun Zhao
- Department of Radiology, New York University Langone Health, 660 First Avenue, New York, New York 10016, USA
- Department of Biomedical Engineering, University of California Davis, 1 Shields Ave, Davis, California 95616, USA
| | - Wenjun Zhou
- Department of Biomedical Engineering, University of California Davis, 1 Shields Ave, Davis, California 95616, USA
- College of Optical and Electronic Technology, China Jiliang University, Hangzhou, Zhejiang 310018, China
| | - Santosh Aparanji
- Department of Radiology, New York University Langone Health, 660 First Avenue, New York, New York 10016, USA
| | - Dibbyan Mazumder
- Department of Radiology, New York University Langone Health, 660 First Avenue, New York, New York 10016, USA
| | - Vivek J. Srinivasan
- Department of Radiology, New York University Langone Health, 660 First Avenue, New York, New York 10016, USA
- Department of Biomedical Engineering, University of California Davis, 1 Shields Ave, Davis, California 95616, USA
- Department of Ophthalmology, New York University Langone Health, 550 First Avenue, New York, New York 10016, USA
- Tech4Health Institute, New York University Langone Health, 433 1st Avenue, New York, New York 10010, USA
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Fairclough SH, Stamp K, Dobbins C. Functional connectivity across dorsal and ventral attention networks in response to task difficulty and experimental pain. Neurosci Lett 2023; 793:136967. [PMID: 36379390 DOI: 10.1016/j.neulet.2022.136967] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Revised: 11/09/2022] [Accepted: 11/10/2022] [Indexed: 11/15/2022]
Abstract
The dorsal and ventral attention networks (DAN & VAN) provide a framework for studying attentional modulation of pain. It has been argued that cognitive demand distracts attention from painful stimuli via top-down reinforcement of task goals (DAN), whereas pain exerts an interruptive effect on cognitive performance via bottom-up pathways (VAN). The current study explores this explanatory framework by manipulating pain and task demand in combination with functional near-infrared spectroscopy (fNIRS) and Granger Causal Connectivity Analyses (GCCA). Twenty-one participants played a racing game at low and high difficulty levels with or without experimental pain (administered via a cold pressor test). Six channels of fNIRS were collected from bilateral frontal eye fields and intraparietal sulci (DAN), with right-lateralised channels at the inferior frontal gyrus and temporoparietal junction (VAN). Our first analysis revealed increased G-causality from bottom-up pathways (VAN) during the cold pressor test. However, an equivalent experience of experimental pain during gameplay increased G-causality in top-down (DAN) pathways, with the left intraparietal sulcus serving a hub of connectivity. High game difficulty increased G-causality via top-down pathways and implicated the right inferior frontal gyrus as an interhemispheric hub. Our results are discussed with reference to existing models of both networks and attentional modulation of pain.
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Affiliation(s)
| | - Kellyann Stamp
- School of Computer Science and Mathematics, Liverpool John Moores University, UK
| | - Chelsea Dobbins
- School of Information Technology and Electrical Engineering, The University of Queensland, Australia
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17
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Scholkmann F, Vollenweider FX. Psychedelics and fNIRS neuroimaging: exploring new opportunities. NEUROPHOTONICS 2023; 10:013506. [PMID: 36474478 PMCID: PMC9717437 DOI: 10.1117/1.nph.10.1.013506] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/28/2022] [Accepted: 11/14/2022] [Indexed: 06/17/2023]
Abstract
In this Outlook paper, we explain to the optical neuroimaging community as well as the psychedelic research community the great potential of using optical neuroimaging with functional near-infrared spectroscopy (fNIRS) to further explore the changes in brain activity induced by psychedelics. We explain why we believe now is the time to exploit the momentum of the current resurgence of research on the effects of psychedelics and the momentum of the increasing progress and popularity of the fNIRS technique to establish fNIRS in psychedelic research. With this article, we hope to contribute to this development.
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Affiliation(s)
- Felix Scholkmann
- University Hospital Zurich, University of Zurich, Biomedical Optics Research Laboratory, Department of Neonatology, Zurich, Switzerland
- University of Bern, Institute of Complementary and Integrative Medicine, Bern, Switzerland
| | - Franz X. Vollenweider
- University Hospital of Psychiatry, University of Zurich, Neuropsychopharmacology and Brain Imaging, Department of Psychiatry, Psychotherapy and Psychosomatics, Zurich, Switzerland
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18
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Klein F, Lührs M, Benitez-Andonegui A, Roehn P, Kranczioch C. Performance comparison of systemic activity correction in functional near-infrared spectroscopy for methods with and without short distance channels. NEUROPHOTONICS 2023; 10:013503. [PMID: 36248616 PMCID: PMC9555616 DOI: 10.1117/1.nph.10.1.013503] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Accepted: 07/25/2022] [Indexed: 05/20/2023]
Abstract
Significance: Functional near-infrared spectroscopy (fNIRS) is a promising tool for neurofeedback (NFB) or brain-computer interfaces (BCIs). However, fNIRS signals are typically highly contaminated by systemic activity (SA) artifacts, and, if not properly corrected, NFB or BCIs run the risk of being based on noise instead of brain activity. This risk can likely be reduced by correcting for SA, in particular when short-distance channels (SDCs) are available. Literature comparing correction methods with and without SDCs is still sparse, specifically comparisons considering single trials are lacking. Aim: This study aimed at comparing the performance of SA correction methods with and without SDCs. Approach: Semisimulated and real motor task data of healthy older adults were used. Correction methods without SDCs included a simple and a more advanced spatial filter. Correction methods with SDCs included a regression approach considering only the closest SDC and two GLM-based methods, one including all eight SDCs and one using only two a priori selected SDCs as regressors. All methods were compared with data uncorrected for SA and correction performance was assessed with quality measures quantifying signal improvement and spatial specificity at single trial level. Results: All correction methods were found to improve signal quality and enhance spatial specificity as compared with the uncorrected data. Methods with SDCs usually outperformed methods without SDCs. Correction methods without SDCs tended to overcorrect the data. However, the exact pattern of results and the degree of differences observable between correction methods varied between semisimulated and real data, and also between quality measures. Conclusions: Overall, results confirmed that both Δ [ HbO ] and Δ [ HbR ] are affected by SA and that correction methods with SDCs outperform methods without SDCs. Nonetheless, improvements in signal quality can also be achieved without SDCs and should therefore be given priority over not correcting for SA.
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Affiliation(s)
- Franziska Klein
- Carl von Ossietzky University of Oldenburg, Neurocognition and Functional Neurorehabilitation Group, Neuropsychology Lab, Oldenburg, Germany
- Address all correspondence to Franziska Klein,
| | - Michael Lührs
- Maastricht University, Faculty of Psychology and Neuroscience, Maastricht, The Netherlands
- Brain Innovation B.V., Maastricht, The Netherlands
| | | | - Pauline Roehn
- Carl von Ossietzky University of Oldenburg, Neurocognition and Functional Neurorehabilitation Group, Neuropsychology Lab, Oldenburg, Germany
| | - Cornelia Kranczioch
- Carl von Ossietzky University of Oldenburg, Neurocognition and Functional Neurorehabilitation Group, Neuropsychology Lab, Oldenburg, Germany
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19
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Becker S, Klein F, König K, Mathys C, Liman T, Witt K. Assessment of dynamic cerebral autoregulation in near-infrared spectroscopy using short channels: A feasibility study in acute ischemic stroke patients. Front Neurol 2022; 13:1028864. [PMID: 36479048 PMCID: PMC9719939 DOI: 10.3389/fneur.2022.1028864] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Accepted: 11/04/2022] [Indexed: 10/07/2023] Open
Abstract
Introduction In acute ischemic stroke, progressive impairment of cerebral autoregulation (CA) is frequent and associated with unfavorable outcomes. Easy assessment of cerebral blood flow and CA in stroke units bedside tools like near-infrared spectroscopy (NIRS) might improve early detection of CA deterioration. This study aimed to assess dynamic CA with multichannel CW-NIRS in acute ischemic stroke (AIS) patients compared to agematched healthy controls. Methods CA reaction was amplified by changes in head of bed position. Long- and short channels were used to monitor systemic artery pressure- and intracranial oscillations simultaneously. Gain and phase shift in spontaneous low- and very low-frequency oscillations (LFO, VLFO) of blood pressure were assessed. Results A total of 54 participants, 27 with AIS and 27 age-matched controls were included. Gain was significantly lower in the AIS group in the LFO range (i) when the upper body was steadily elevated to 30. and (ii) after its abrupt elevation to 30°. No other differences were found between groups. Discussion This study demonstrates the feasibility of NIRS short channels to measure CA in AIS patients in one single instrument. A lower gain in AIS might indicate decreased CA activity in this pilot study, but further studies investigating the role of NIRS short channels in AIS are needed.
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Affiliation(s)
- Sabeth Becker
- Department of Neurology, School of Medicine and Health Sciences, Carl von Ossietzky University of Oldenburg, Oldenburg, Germany
| | - Franziska Klein
- Neurocognition and Functional Neurorehabilitation Group, Neuropsychology Lab, Department of Psychology, Faculty of Medicine and Health Sciences, University of Oldenburg, Oldenburg, Germany
| | - Katja König
- Department of Neurology, School of Medicine and Health Sciences, Carl von Ossietzky University of Oldenburg, Oldenburg, Germany
- University Clinic for Neurology, Evangelical Hospital, Oldenburg, Germany
| | - Christian Mathys
- Institute of Radiology and Neuroradiology, Evangelical Hospital, Oldenburg, Germany
- Research Centre Neurosensory Science, Department of Human Medicine, Faculty of Medicine and Health Sciences, University of Oldenburg, Oldenburg, Germany
| | - Thomas Liman
- Department of Neurology, School of Medicine and Health Sciences, Carl von Ossietzky University of Oldenburg, Oldenburg, Germany
- University Clinic for Neurology, Evangelical Hospital, Oldenburg, Germany
| | - Karsten Witt
- Department of Neurology, School of Medicine and Health Sciences, Carl von Ossietzky University of Oldenburg, Oldenburg, Germany
- University Clinic for Neurology, Evangelical Hospital, Oldenburg, Germany
- Institute of Radiology and Neuroradiology, Evangelical Hospital, Oldenburg, Germany
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20
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Liu D, Zhang Y, Zhang P, Li T, Li Z, Zhang L, Gao F. Deep-learning informed Kalman filtering for priori-free and real-time hemodynamics extraction in functional near-infrared spectroscopy. BIOMEDICAL OPTICS EXPRESS 2022; 13:4787-4801. [PMID: 36187239 PMCID: PMC9484432 DOI: 10.1364/boe.467943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Revised: 08/04/2022] [Accepted: 08/05/2022] [Indexed: 06/16/2023]
Abstract
Separation of the physiological interferences and the neural hemodynamics has been a vitally important task in the realistic implementation of functional near-infrared spectroscopy (fNIRS). Although many efforts have been devoted, the established solutions to this issue additionally rely on priori information on the interferences and activation responses, such as time-frequency characteristics and spatial patterns, etc., also hindering the realization of real-time. To tackle the adversity, we herein propose a novel priori-free scheme for real-time physiological interference suppression. This method combines the robustness of deep-leaning-based interference characterization and adaptivity of Kalman filtering: a long short-term memory (LSTM) network is trained with the time-courses of the absorption perturbation baseline for interferences profiling, and successively, a Kalman filtering process is applied with reference to the noise prediction for real-time activation extraction. The proposed method is validated using both simulated dynamic data and in-vivo experiments, showing the comprehensively improved performance and promisingly appended superiority achieved in the purely data-driven way.
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Affiliation(s)
- Dongyuan Liu
- College of Precision Instruments and Optoelectronics Engineering, Tianjin University, Tianjin 300072, China
| | - Yao Zhang
- College of Precision Instruments and Optoelectronics Engineering, Tianjin University, Tianjin 300072, China
| | - Pengrui Zhang
- College of Precision Instruments and Optoelectronics Engineering, Tianjin University, Tianjin 300072, China
| | - Tieni Li
- College of Precision Instruments and Optoelectronics Engineering, Tianjin University, Tianjin 300072, China
| | - Zhiyong Li
- College of Precision Instruments and Optoelectronics Engineering, Tianjin University, Tianjin 300072, China
| | - Limin Zhang
- College of Precision Instruments and Optoelectronics Engineering, Tianjin University, Tianjin 300072, China
- Tianjin Key laboratory of Biomedical Detecting Techniques and Instruments, Tianjin 300072, China
| | - Feng Gao
- College of Precision Instruments and Optoelectronics Engineering, Tianjin University, Tianjin 300072, China
- Tianjin Key laboratory of Biomedical Detecting Techniques and Instruments, Tianjin 300072, China
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21
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McLinden J, Borgheai B, Hosni S, Kumar C, Rahimi N, Shao M, Spencer KM, Shahriari Y. Individual-Specific Characterization of Event-Related Hemodynamic Responses during an Auditory Task: An Exploratory Study. Behav Brain Res 2022; 436:114074. [PMID: 36028001 DOI: 10.1016/j.bbr.2022.114074] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Revised: 08/11/2022] [Accepted: 08/21/2022] [Indexed: 11/24/2022]
Abstract
Functional near-infrared spectroscopy (fNIRS) has been established as an informative modality for understanding the hemodynamic-metabolic correlates of cortical auditory processing. To date, such knowledge has shown broad clinical applications in the diagnosis, treatment, and intervention procedures in disorders affecting auditory processing; however, exploration of the hemodynamic response to auditory tasks is yet incomplete. This holds particularly true in the context of auditory event-related fNIRS experiments, where preliminary work has shown the presence of valid responses while leaving the need for more comprehensive explorations of the hemodynamic correlates of event-related auditory processing. In this study, we apply an individual-specific approach to characterize fNIRS-based hemodynamic changes during an auditory task in healthy adults. Oxygenated hemoglobin (HbO2) concentration change time courses were acquired from eight participants. Independent component analysis (ICA) was then applied to isolate individual-specific class discriminative spatial filters, which were then applied to HbO2 time courses to extract auditory-related hemodynamic features. While six of eight participants produced significant class discriminative features before ICA-based spatial filtering, the proposed method identified significant auditory hemodynamic features in all participants. Furthermore, ICA-based filtering improved correlation between trial labels and extracted features in every participant. For the first time, this study demonstrates hemodynamic features important in experiments exploring auditory processing as well as the utility of individual-specific ICA-based spatial filtering in fNIRS-based feature extraction techniques in auditory experiments. These outcomes provide insights for future studies exploring auditory hemodynamic characteristics and may eventually provide a baseline framework for better understanding auditory response dysfunctions in clinical populations.
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Affiliation(s)
- J McLinden
- Department of Electrical, Computer, and Biomedical Engineering, University of Rhode Island, Kingston, RI, USA
| | - B Borgheai
- Department of Electrical, Computer, and Biomedical Engineering, University of Rhode Island, Kingston, RI, USA
| | - S Hosni
- Department of Electrical, Computer, and Biomedical Engineering, University of Rhode Island, Kingston, RI, USA
| | - C Kumar
- Department of Computer and Information Science, University of Massachusetts Dartmouth, MA
| | - N Rahimi
- Department of Computer and Information Science, University of Massachusetts Dartmouth, MA
| | - M Shao
- Department of Computer and Information Science, University of Massachusetts Dartmouth, MA
| | - K M Spencer
- Department of Psychiatry, VA Boston Healthcare System and Harvard Medical School, Jamaica Plain, Boston, MA, USA
| | - Y Shahriari
- Department of Electrical, Computer, and Biomedical Engineering, University of Rhode Island, Kingston, RI, USA.
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22
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Lanka P, Bortfeld H, Huppert TJ. Correction of global physiology in resting-state functional near-infrared spectroscopy. NEUROPHOTONICS 2022; 9:035003. [PMID: 35990173 PMCID: PMC9386281 DOI: 10.1117/1.nph.9.3.035003] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Accepted: 07/08/2022] [Indexed: 05/30/2023]
Abstract
Significance: Resting-state functional connectivity (RSFC) analyses of functional near-infrared spectroscopy (fNIRS) data reveal cortical connections and networks across the brain. Motion artifacts and systemic physiology in evoked fNIRS signals present unique analytical challenges, and methods that control for systemic physiological noise have been explored. Whether these same methods require modification when applied to resting-state fNIRS (RS-fNIRS) data remains unclear. Aim: We systematically examined the sensitivity and specificity of several RSFC analysis pipelines to identify the best methods for correcting global systemic physiological signals in RS-fNIRS data. Approach: Using numerically simulated RS-fNIRS data, we compared the rates of true and false positives for several connectivity analysis pipelines. Their performance was scored using receiver operating characteristic analysis. Pipelines included partial correlation and multivariate Granger causality, with and without short-separation measurements, and a modified multivariate causality model that included a non-traditional zeroth-lag cross term. We also examined the effects of pre-whitening and robust statistical estimators on performance. Results: Consistent with previous work on bivariate correlation models, our results demonstrate that robust statistics and pre-whitening are effective methods to correct for motion artifacts and autocorrelation in the fNIRS time series. Moreover, we found that pre-filtering using principal components extracted from short-separation fNIRS channels as part of a partial correlation model was most effective in reducing spurious correlations due to shared systemic physiology when the two signals of interest fluctuated synchronously. However, when there was a temporal lag between the signals, a multivariate Granger causality test incorporating the short-separation channels was better. Since it is unknown if such a lag exists in experimental data, we propose a modified version of Granger causality that includes the non-traditional zeroth-lag term as a compromising solution. Conclusions: A combination of pre-whitening, robust statistical methods, and partial correlation in the processing pipeline to reduce autocorrelation, motion artifacts, and global physiology are suggested for obtaining statistically valid connectivity metrics with RS-fNIRS. Further studies should validate the effectiveness of these methods using human data.
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Affiliation(s)
- Pradyumna Lanka
- University of California, Merced, Department of Psychological Sciences, Merced, California, United States
| | - Heather Bortfeld
- University of California, Merced, Department of Psychological Sciences, Merced, California, United States
- University of California, Merced, Department of Cognitive and Information Sciences, Merced, California, United States
| | - Theodore J. Huppert
- University of Pittsburgh, Department of Electrical and Computer Engineering, Pittsburgh, Pennsylvania, United States
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Scholkmann F, Tachtsidis I, Wolf M, Wolf U. Systemic physiology augmented functional near-infrared spectroscopy: a powerful approach to study the embodied human brain. NEUROPHOTONICS 2022; 9:030801. [PMID: 35832785 PMCID: PMC9272976 DOI: 10.1117/1.nph.9.3.030801] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Accepted: 06/07/2022] [Indexed: 05/15/2023]
Abstract
In this Outlook paper, we explain why an accurate physiological interpretation of functional near-infrared spectroscopy (fNIRS) neuroimaging signals is facilitated when systemic physiological activity (e.g., cardiorespiratory and autonomic activity) is measured simultaneously by employing systemic physiology augmented functional near-infrared spectroscopy (SPA-fNIRS). The rationale for SPA-fNIRS is twofold: (i) SPA-fNIRS enables a more complete interpretation and understanding of the fNIRS signals measured at the head since they contain components originating from neurovascular coupling and from systemic physiological sources. The systemic physiology signals measured with SPA-fNIRS can be used for regressing out physiological confounding components in fNIRS signals. Misinterpretations can thus be minimized. (ii) SPA-fNIRS enables to study the embodied brain by linking the brain with the physiological state of the entire body, allowing novel insights into their complex interplay. We envisage the SPA-fNIRS approach will become increasingly important in the future.
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Affiliation(s)
- Felix Scholkmann
- University of Bern, Institute of Complementary and Integrative Medicine, Bern, Switzerland
- University Hospital Zurich, University of Zurich, Biomedical Optics Research Laboratory, Neonatology Research, Department of Neonatology, Zurich, Switzerland
| | - Ilias Tachtsidis
- University College London, Biomedical Optics Research Laboratory, Department of Medical Physics and Biomedical Engineering, London, United Kingdom
| | - Martin Wolf
- University Hospital Zurich, University of Zurich, Biomedical Optics Research Laboratory, Neonatology Research, Department of Neonatology, Zurich, Switzerland
| | - Ursula Wolf
- University of Bern, Institute of Complementary and Integrative Medicine, Bern, Switzerland
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Molina-Rodríguez S, Mirete-Fructuoso M, Martínez LM, Ibañez-Ballesteros J. Frequency-domain analysis of fNIRS fluctuations induced by rhythmic mental arithmetic. Psychophysiology 2022; 59:e14063. [PMID: 35394075 PMCID: PMC9540762 DOI: 10.1111/psyp.14063] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Revised: 01/19/2022] [Accepted: 03/08/2022] [Indexed: 12/25/2022]
Abstract
Functional near‐infrared spectroscopy (fNIRS) is an increasingly used technology for imaging neural correlates of cognitive processes. However, fNIRS signals are commonly impaired by task‐evoked and spontaneous hemodynamic oscillations of non‐cerebral origin, a major challenge in fNIRS research. In an attempt to isolate the task‐evoked cortical response, we investigated the coupling between hemodynamic changes arising from superficial and deep layers during mental effort. For this aim, we applied a rhythmic mental arithmetic task to induce cyclic hemodynamic fluctuations suitable for effective frequency‐resolved measurements. Twenty university students aged 18–25 years (eight males) underwent the task while hemodynamic changes were monitored in the forehead using a newly developed NIRS device, capable of multi‐channel and multi‐distance recordings. We found significant task‐related fluctuations for oxy‐ and deoxy‐hemoglobin, highly coherent across shallow and deep tissue layers, corroborating the strong influence of surface hemodynamics on deep fNIRS signals. Importantly, after removing such surface contamination by linear regression, we show that the frontopolar cortex response to a mental math task follows an unusual inverse oxygenation pattern. We confirm this finding by applying for the first time an alternative method to estimate the neural signal, based on transfer function analysis and phasor algebra. Altogether, our results demonstrate the feasibility of using a rhythmic mental task to impose an oscillatory state useful to separate true brain functional responses from those of non‐cerebral origin. This separation appears to be essential for a better understanding of fNIRS data and to assess more precisely the dynamics of the neuro‐visceral link. We proposed the use of rhythmic mental arithmetic tasks to induce cyclic oscillations in multi‐distance fNIRS signals measured on the forehead, suitable for effective frequency‐domain analysis to better identify the actual neural functional response. We confirm the impairment of deep signals by task‐evoked non‐cerebral confounds, while providing evidence for an inverse oxygenation response in the frontopolar cortex.
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Affiliation(s)
- Sergio Molina-Rodríguez
- Cellular and Systems Neurobiology, Institute of Neurosciences, Spanish National Research Council-Miguel Hernandez University, Alicante, Spain
| | - Marcos Mirete-Fructuoso
- Cellular and Systems Neurobiology, Institute of Neurosciences, Spanish National Research Council-Miguel Hernandez University, Alicante, Spain
| | - Luis M Martínez
- Cellular and Systems Neurobiology, Institute of Neurosciences, Spanish National Research Council-Miguel Hernandez University, Alicante, Spain
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Hakim U, Pinti P, Noah AJ, Zhang X, Burgess P, Hamilton A, Hirsch J, Tachtsidis I. Investigation of functional near-infrared spectroscopy signal quality and development of the hemodynamic phase correlation signal. NEUROPHOTONICS 2022; 9:025001. [PMID: 35599691 PMCID: PMC9116886 DOI: 10.1117/1.nph.9.2.025001] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Accepted: 04/13/2022] [Indexed: 06/15/2023]
Abstract
Significance: There is a longstanding recommendation within the field of fNIRS to use oxygenated (HbO 2 ) and deoxygenated (HHb) hemoglobin when analyzing and interpreting results. Despite this, many fNIRS studies do focus onHbO 2 only. Previous work has shown thatHbO 2 on its own is susceptible to systemic interference and results may mostly reflect that rather than functional activation. Studies using bothHbO 2 and HHb to draw their conclusions do so with varying methods and can lead to discrepancies between studies. The combination ofHbO 2 and HHb has been recommended as a method to utilize both signals in analysis. Aim: We present the development of the hemodynamic phase correlation (HPC) signal to combineHbO 2 and HHb as recommended to utilize both signals in the analysis. We use synthetic and experimental data to evaluate how the HPC and current signals used for fNIRS analysis compare. Approach: About 18 synthetic datasets were formed using resting-state fNIRS data acquired from 16 channels over the frontal lobe. To simulate fNIRS data for a block-design task, we superimposed a synthetic task-related hemodynamic response to the resting state data. This data was used to develop an HPC-general linear model (GLM) framework. Experiments were conducted to investigate the performance of each signal at different SNR and to investigate the effect of false positives on the data. Performance was based on each signal's mean T -value across channels. Experimental data recorded from 128 participants across 134 channels during a finger-tapping task were used to investigate the performance of multiple signals [HbO 2 , HHb, HbT, HbD, correlation-based signal improvement (CBSI), and HPC] on real data. Signal performance was evaluated on its ability to localize activation to a specific region of interest. Results: Results from varying the SNR show that the HPC signal has the highest performance for high SNRs. The CBSI performed the best for medium-low SNR. The next analysis evaluated how false positives affect the signals. The analyses evaluating the effect of false positives showed that the HPC and CBSI signals reflect the effect of false positives onHbO 2 and HHb. The analysis of real experimental data revealed that the HPC and HHb signals provide localization to the primary motor cortex with the highest accuracy. Conclusions: We developed a new hemodynamic signal (HPC) with the potential to overcome the current limitations of usingHbO 2 and HHb separately. Our results suggest that the HPC signal provides comparable accuracy to HHb to localize functional activation while at the same time being more robust against false positives.
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Affiliation(s)
- Uzair Hakim
- University College London, Department of Medical Physics and Biomedical Engineering, London, United Kingdom
| | - Paola Pinti
- University College London, Department of Medical Physics and Biomedical Engineering, London, United Kingdom
- University of London, Birkbeck College, Centre for Brain and Cognitive Development, London, United Kingdom
| | - Adam J. Noah
- Yale University, Department of Neuroscience and Comparative Medicine, Yale School of Medicine, United States
| | - Xian Zhang
- Yale University, Department of Neuroscience and Comparative Medicine, Yale School of Medicine, United States
| | - Paul Burgess
- University College London, Institute of Cognitive Neuroscience, London, United Kingdom
| | - Antonia Hamilton
- University College London, Institute of Cognitive Neuroscience, London, United Kingdom
| | - Joy Hirsch
- University College London, Department of Medical Physics and Biomedical Engineering, London, United Kingdom
- Yale University, Department of Neuroscience and Comparative Medicine, Yale School of Medicine, United States
| | - Ilias Tachtsidis
- University College London, Department of Medical Physics and Biomedical Engineering, London, United Kingdom
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Wojtkiewicz S, Bejm K, Liebert A. Lock-in functional near-infrared spectroscopy for measurement of the haemodynamic brain response. BIOMEDICAL OPTICS EXPRESS 2022; 13:1869-1887. [PMID: 35519260 PMCID: PMC9045899 DOI: 10.1364/boe.448038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2021] [Revised: 02/13/2022] [Accepted: 02/15/2022] [Indexed: 06/14/2023]
Abstract
Here we show a method of the lock-in amplifying near-infrared signals originating within a human brain. It implies using two 90-degree rotated source-detector pairs fixed on a head surface. Both pairs have a joint sensitivity region located towards the brain. A direct application of the lock-in technique on both signals results in amplifying common frequency components, e.g. related to brain cortex stimulation and attenuating the rest, including all components not related to the stimulation: e.g. pulse, instrumental and biological noise or movement artefacts. This is a self-driven method as no prior assumptions are needed and the noise model is provided by the interfering signals themselves. We show the theory (classical modified Beer-Lambert law and diffuse optical tomography approaches), the algorithm implementation and tests on a finite element mathematical model and in-vivo on healthy volunteers during visual cortex stimulation. The proposed hardware and algorithm complexity suit the entire spectrum of (continuous wave, frequency domain, time-resolved) near-infrared spectroscopy systems featuring real-time, direct, robust and low-noise brain activity registration tool. As such, this can be of special interest in optical brain computer interfaces and high reliability/stability monitors of tissue oxygenation.
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Bálint A, Wimmer W, Caversaccio M, Weder S. Neural Activity during Audiovisual Speech Processing: Protocol for a Functional Neuroimaging Study (Preprint). JMIR Res Protoc 2022; 11:e38407. [PMID: 35727624 PMCID: PMC9239541 DOI: 10.2196/38407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 05/12/2022] [Accepted: 06/03/2022] [Indexed: 11/21/2022] Open
Abstract
Background Functional near-infrared spectroscopy (fNIRS) studies have demonstrated associations between hearing outcomes after cochlear implantation and plastic brain changes. However, inconsistent results make it difficult to draw conclusions. A major problem is that many variables need to be controlled. To gain further understanding, a careful preparation and planning of such a functional neuroimaging task is key. Objective Using fNIRS, our main objective is to develop a well-controlled audiovisual speech comprehension task to study brain activation in individuals with normal hearing and hearing impairment (including cochlear implant users). The task should be deductible from clinically established tests, induce maximal cortical activation, use optimal coverage of relevant brain regions, and be reproducible by other research groups. Methods The protocol will consist of a 5-minute resting state and 2 stimulation periods that are 12 minutes each. During the stimulation periods, 13-second video recordings of the clinically established Oldenburg Sentence Test (OLSA) will be presented. Stimuli will be presented in 4 different modalities: (1) speech in quiet, (2) speech in noise, (3) visual only (ie, lipreading), and (4) audiovisual speech. Each stimulus type will be repeated 10 times in a counterbalanced block design. Interactive question windows will monitor speech comprehension during the task. After the measurement, we will perform a 3D scan to digitize optode positions and verify the covered anatomical locations. Results This paper reports the study protocol. Enrollment for the study started in August 2021. We expect to publish our first results by the end of 2022. Conclusions The proposed audiovisual speech comprehension task will help elucidate neural correlates to speech understanding. The comprehensive study will have the potential to provide additional information beyond the conventional clinical standards about the underlying plastic brain changes of a hearing-impaired person. It will facilitate more precise indication criteria for cochlear implantation and better planning of rehabilitation. International Registered Report Identifier (IRRID) DERR1-10.2196/38407
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Affiliation(s)
- András Bálint
- Department of Otorhinolaryngology, Head and Neck Surgery, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland
- Hearing Research Laboratory, ARTORG Center for Biomedical Engineering Research, University of Bern, Bern, Switzerland
| | - Wilhelm Wimmer
- Department of Otorhinolaryngology, Head and Neck Surgery, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland
- Hearing Research Laboratory, ARTORG Center for Biomedical Engineering Research, University of Bern, Bern, Switzerland
| | - Marco Caversaccio
- Department of Otorhinolaryngology, Head and Neck Surgery, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland
- Hearing Research Laboratory, ARTORG Center for Biomedical Engineering Research, University of Bern, Bern, Switzerland
| | - Stefan Weder
- Department of Otorhinolaryngology, Head and Neck Surgery, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland
- Hearing Research Laboratory, ARTORG Center for Biomedical Engineering Research, University of Bern, Bern, Switzerland
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Abdalmalak A, Novi SL, Kazazian K, Norton L, Benaglia T, Slessarev M, Debicki DB, Lawrence KS, Mesquita RC, Owen AM. Effects of Systemic Physiology on Mapping Resting-State Networks Using Functional Near-Infrared Spectroscopy. Front Neurosci 2022; 16:803297. [PMID: 35350556 PMCID: PMC8957952 DOI: 10.3389/fnins.2022.803297] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Accepted: 02/07/2022] [Indexed: 12/11/2022] Open
Abstract
Resting-state functional connectivity (rsFC) has gained popularity mainly due to its simplicity and potential for providing insights into various brain disorders. In this vein, functional near-infrared spectroscopy (fNIRS) is an attractive choice due to its portability, flexibility, and low cost, allowing for bedside imaging of brain function. While promising, fNIRS suffers from non-neural signal contaminations (i.e., systemic physiological noise), which can increase correlation across fNIRS channels, leading to spurious rsFC networks. In the present work, we hypothesized that additional measurements with short channels, heart rate, mean arterial pressure, and end-tidal CO2 could provide a better understanding of the effects of systemic physiology on fNIRS-based resting-state networks. To test our hypothesis, we acquired 12 min of resting-state data from 10 healthy participants. Unlike previous studies, we investigated the efficacy of different pre-processing approaches in extracting resting-state networks. Our results are in agreement with previous studies and reinforce the fact that systemic physiology can overestimate rsFC. We expanded on previous work by showing that removal of systemic physiology decreases intra- and inter-subject variability, increasing the ability to detect neural changes in rsFC across groups and over longitudinal studies. Our results show that by removing systemic physiology, fNIRS can reproduce resting-state networks often reported with functional magnetic resonance imaging (fMRI). Finally, the present work details the effects of systemic physiology and outlines how to remove (or at least ameliorate) their contributions to fNIRS signals acquired at rest.
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Affiliation(s)
- Androu Abdalmalak
- Department of Physiology and Pharmacology, Western University, London, ON, Canada
- Brain and Mind Institute, Western University, London, ON, Canada
- *Correspondence: Androu Abdalmalak,
| | - Sergio L. Novi
- “Gleb Wataghin” Institute of Physics, University of Campinas, Campinas, Brazil
- *Correspondence: Androu Abdalmalak,
| | - Karnig Kazazian
- Brain and Mind Institute, Western University, London, ON, Canada
| | - Loretta Norton
- Department of Psychology, King’s University College at Western University, London, ON, Canada
| | - Tatiana Benaglia
- Institute of Mathematics, Statistics and Scientific Computing, University of Campinas, Campinas, Brazil
| | - Marat Slessarev
- Clinical Neurological Sciences, Western University, London, ON, Canada
| | - Derek B. Debicki
- Brain and Mind Institute, Western University, London, ON, Canada
- Clinical Neurological Sciences, Western University, London, ON, Canada
| | - Keith St. Lawrence
- Department of Medical Biophysics, Western University, London, ON, Canada
| | - Rickson C. Mesquita
- “Gleb Wataghin” Institute of Physics, University of Campinas, Campinas, Brazil
| | - Adrian M. Owen
- Department of Physiology and Pharmacology, Western University, London, ON, Canada
- Brain and Mind Institute, Western University, London, ON, Canada
- Department of Psychology, Western University, London, ON, Canada
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fMRI-based validation of continuous-wave fNIRS of supplementary motor area activation during motor execution and motor imagery. Sci Rep 2022; 12:3570. [PMID: 35246563 PMCID: PMC8897516 DOI: 10.1038/s41598-022-06519-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Accepted: 01/28/2022] [Indexed: 11/09/2022] Open
Abstract
Compared to functional magnetic resonance imaging (fMRI), functional near infrared spectroscopy (fNIRS) has several advantages that make it particularly interesting for neurofeedback (NFB). A pre-requisite for NFB applications is that with fNIRS, signals from the brain region of interest can be measured. This study focused on the supplementary motor area (SMA). Healthy older participants (N = 16) completed separate continuous-wave (CW-) fNIRS and (f)MRI sessions. Data were collected for executed and imagined hand movements (motor imagery, MI), and for MI of whole body movements. Individual anatomical data were used to (i) define the regions of interest for fMRI analysis, to (ii) extract the fMRI BOLD response from the cortical regions corresponding to the fNIRS channels, and (iii) to select fNIRS channels. Concentration changes in oxygenated (\documentclass[12pt]{minimal}
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\begin{document}$$\Delta [HbR]$$\end{document}Δ[HbR] is the more specific signal. Selection of the fNIRS channel set based on individual anatomy did not improve the results. Overall, the study indicates that in terms of spatial specificity and task sensitivity SMA activation can be reliably measured with CW-fNIRS.
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Wyser DG, Kanzler CM, Salzmann L, Lambercy O, Wolf M, Scholkmann F, Gassert R. Characterizing reproducibility of cerebral hemodynamic responses when applying short-channel regression in functional near-infrared spectroscopy. NEUROPHOTONICS 2022; 9:015004. [PMID: 35265732 PMCID: PMC8901194 DOI: 10.1117/1.nph.9.1.015004] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Accepted: 02/11/2022] [Indexed: 05/06/2023]
Abstract
Significance: Functional near-infrared spectroscopy (fNIRS) enables the measurement of brain activity noninvasively. Optical neuroimaging with fNIRS has been shown to be reproducible on the group level and hence is an excellent research tool, but the reproducibility on the single-subject level is still insufficient, challenging the use for clinical applications. Aim: We investigated the effect of short-channel regression (SCR) as an approach to obtain fNIRS measurements with higher reproducibility on a single-subject level. SCR simultaneously considers contributions from long- and short-separation channels and removes confounding physiological changes through the regression of the short-separation channel information. Approach: We performed a test-retest study with a hand grasping task in 15 healthy subjects using a wearable fNIRS device, optoHIVE. Relevant brain regions were localized with transcranial magnetic stimulation to ensure correct placement of the optodes. Reproducibility was assessed by intraclass correlation, correlation analysis, mixed effects modeling, and classification accuracy of the hand grasping task. Further, we characterized the influence of SCR on reproducibility. Results: We found a high reproducibility of fNIRS measurements on a single-subject level ( ICC single = 0.81 and correlation r = 0.81 ). SCR increased the reproducibility from 0.64 to 0.81 ( ICC single ) but did not affect classification (85% overall accuracy). Significant intersubject variability in the reproducibility was observed and was explained by Mayer wave oscillations and low raw signal strength. The raw signal-to-noise ratio (threshold at 40 dB) allowed for distinguishing between persons with weak and strong activations. Conclusions: We report, for the first time, that fNIRS measurements are reproducible on a single-subject level using our optoHIVE fNIRS system and that SCR improves reproducibility. In addition, we give a benchmark to easily assess the ability of a subject to elicit sufficiently strong hemodynamic responses. With these insights, we pave the way for the reliable use of fNIRS neuroimaging in single subjects for neuroscientific research and clinical applications.
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Affiliation(s)
- Dominik G. Wyser
- ETH Zurich, Rehabilitation Engineering Laboratory, Department of Health Sciences and Technology, Zurich, Switzerland
- University Hospital Zurich, University of Zurich, Biomedical Optics Research Laboratory, Department of Neonatology, Zurich, Switzerland
- Address all correspondence to Dominik G. Wyser,
| | - Christoph M. Kanzler
- ETH Zurich, Rehabilitation Engineering Laboratory, Department of Health Sciences and Technology, Zurich, Switzerland
| | - Lena Salzmann
- ETH Zurich, Rehabilitation Engineering Laboratory, Department of Health Sciences and Technology, Zurich, Switzerland
| | - Olivier Lambercy
- ETH Zurich, Rehabilitation Engineering Laboratory, Department of Health Sciences and Technology, Zurich, Switzerland
| | - Martin Wolf
- University Hospital Zurich, University of Zurich, Biomedical Optics Research Laboratory, Department of Neonatology, Zurich, Switzerland
| | - Felix Scholkmann
- University Hospital Zurich, University of Zurich, Biomedical Optics Research Laboratory, Department of Neonatology, Zurich, Switzerland
- University of Bern, Institute of Complementary and Integrative Medicine, Bern, Switzerland
| | - Roger Gassert
- ETH Zurich, Rehabilitation Engineering Laboratory, Department of Health Sciences and Technology, Zurich, Switzerland
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Measurement of Adult Human Brain Responses to Breath-Holding by Multi-Distance Hyperspectral Near-Infrared Spectroscopy. APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app12010371] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
A major limitation of near-infrared spectroscopy (NIRS) is its high sensitivity to the scalp and low sensitivity to the brain of adult humans. In the present work we used multi-distance hyperspectral NIRS (hNIRS) to investigate the optimal source-detector distances, wavelength ranges, and analysis techniques to separate cerebral responses to 30 s breath-holds (BHs) from the responses in the superficial tissue layer in healthy adult humans. We observed significant responses to BHs in the scalp hemodynamics. Cerebral responses to BHs were detected in the cytochrome C oxidase redox (rCCO) at 4 cm without using data from the short-distance channel. Using the data from the 1 cm channel in the two-layer regression algorithm showed that cerebral hemodynamic and rCCO responses also occurred at 3 cm. We found that the waveband 700–900 nm was optimal for the detection of cerebral responses to BHs in adults.
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Gilmore N, Yücel MA, Li X, Boas DA, Kiran S. Investigating Language and Domain-General Processing in Neurotypicals and Individuals With Aphasia - A Functional Near-Infrared Spectroscopy Pilot Study. Front Hum Neurosci 2021; 15:728151. [PMID: 34602997 PMCID: PMC8484538 DOI: 10.3389/fnhum.2021.728151] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Accepted: 08/25/2021] [Indexed: 11/29/2022] Open
Abstract
Brain reorganization patterns associated with language recovery after stroke have long been debated. Studying mechanisms of spontaneous and treatment-induced language recovery in post-stroke aphasia requires a network-based approach given the potential for recruitment of perilesional left hemisphere language regions, homologous right hemisphere language regions, and/or spared bilateral domain-general regions. Recent hardware, software, and methodological advances in functional near-infrared spectroscopy (fNIRS) make it well-suited to examine this question. fNIRS is cost-effective with minimal contraindications, making it a robust option to monitor treatment-related brain activation changes over time. Establishing clear activation patterns in neurotypical adults during language and domain-general cognitive processes via fNIRS is an important first step. Some fNIRS studies have investigated key language processes in healthy adults, yet findings are challenging to interpret in the context of methodological limitations. This pilot study used fNIRS to capture brain activation during language and domain-general processing in neurotypicals and individuals with aphasia. These findings will serve as a reference when interpreting treatment-related changes in brain activation patterns in post-stroke aphasia in the future. Twenty-four young healthy controls, seventeen older healthy controls, and six individuals with left hemisphere stroke-induced aphasia completed two language tasks (i.e., semantic feature, picture naming) and one domain-general cognitive task (i.e., arithmetic) twice during fNIRS. The probe covered bilateral frontal, parietal, and temporal lobes and included short-separation detectors for scalp signal nuisance regression. Younger and older healthy controls activated core language regions during semantic feature processing (e.g., left inferior frontal gyrus pars opercularis) and lexical retrieval (e.g., left inferior frontal gyrus pars triangularis) and domain-general regions (e.g., bilateral middle frontal gyri) during hard versus easy arithmetic as expected. Consistent with theories of post-stroke language recovery, individuals with aphasia activated areas outside the traditional networks: left superior frontal gyrus and left supramarginal gyrus during semantic feature judgment; left superior frontal gyrus and right precentral gyrus during picture naming; and left inferior frontal gyrus pars opercularis during arithmetic processing. The preliminary findings in the stroke group highlight the utility of using fNIRS to study language and domain-general processing in aphasia.
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Affiliation(s)
- Natalie Gilmore
- Department of Speech Language & Hearing Sciences, Sargent College of Health and Rehabilitation Sciences, Boston University, Boston, MA, United States
| | - Meryem Ayse Yücel
- Neurophotonics Center, Biomedical Engineering, Boston University, Boston, MA, United States
| | - Xinge Li
- Neurophotonics Center, Biomedical Engineering, Boston University, Boston, MA, United States.,Department of Psychology, College of Liberal Arts and Social Sciences, University of Houston, Houston, TX, United States
| | - David A Boas
- Neurophotonics Center, Biomedical Engineering, Boston University, Boston, MA, United States
| | - Swathi Kiran
- Department of Speech Language & Hearing Sciences, Sargent College of Health and Rehabilitation Sciences, Boston University, Boston, MA, United States
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Luke R, Shader MJ, McAlpine D. Characterization of Mayer-wave oscillations in functional near-infrared spectroscopy using a physiologically informed model of the neural power spectra. NEUROPHOTONICS 2021; 8:041001. [PMID: 34901310 PMCID: PMC8652350 DOI: 10.1117/1.nph.8.4.041001] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2021] [Accepted: 11/23/2021] [Indexed: 06/08/2023]
Abstract
Significance: Mayer waves are spontaneous oscillations in arterial blood pressure that can mask cortical hemodynamic responses associated with neural activity of interest. Aim: We aim to characterize the properties of oscillations in the functional near-infrared spectroscopy (fNIRS) signal generated by Mayer waves in a large sample of fNIRS recordings. Further, we aim to determine the impact of short-channel correction for the attenuation of these unwanted signal components. Approach: Mayer-wave oscillation parameters were extracted from 310 fNIRS measurements using the fitting oscillations and one-over-f method to compute normative values. The effect of short-channel correction on Mayer-wave oscillation power was quantified on 222 measurements. The practical benefit of the short-channel correction approach for reducing Mayer waves and improving response detection was also evaluated on a subgroup of 17 fNIRS measurements collected during a passive auditory speech detection experiment. Results: Mayer-wave oscillations had a mean frequency of 0.108 Hz, bandwidth of 0.04 Hz, and power of 3.5 μ M 2 / Hz . The distribution of oscillation signal power was positively skewed, with some measurements containing large Mayer waves. Short-channel correction significantly reduced the amplitude of these undesired signals; greater attenuation was observed for measurements containing larger Mayer-wave oscillations. Conclusions: A robust method for quantifying Mayer-wave oscillations in the fNIRS signal spectrum was presented and used to provide normative parameterization. Short-channel correction is recommended as an approach for attenuating Mayer waves, particularly in participants with large oscillations.
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Affiliation(s)
- Robert Luke
- Macquarie University, Australian Hearing Hub, Macquarie University Hearing, Department of Linguistics, Sydney, Australia
- Bionics Institute, Melbourne, Australia
| | - Maureen J. Shader
- Bionics Institute, Melbourne, Australia
- The University of Melbourne, Department of Medical Bionics, Melbourne, Australia
| | - David McAlpine
- Macquarie University, Australian Hearing Hub, Macquarie University Hearing, Department of Linguistics, Sydney, Australia
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du Plessis S, Oni IK, Lapointe AP, Campbell C, Dunn JF, Debert CT. Treatment of Persistent Post-Concussion Syndrome with Repetitive Transcranial Magnetic Stimulation Using Functional Near-Infrared Spectroscopy as a Biomarker of Response: A Randomized Sham-Controlled Clinical Trial Protocol (Preprint). JMIR Res Protoc 2021; 11:e31308. [PMID: 35315783 PMCID: PMC8984821 DOI: 10.2196/31308] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Revised: 09/29/2021] [Accepted: 01/25/2022] [Indexed: 01/13/2023] Open
Abstract
Background Approximately one-third of all concussions lead to persistent postconcussion syndrome (PPCS). Repetitive transcranial magnetic stimulation (rTMS) is a form of noninvasive brain stimulation that has been extensively used to treat refractory major depressive disorder and has a strong potential to be used as a treatment for patients with PPCS. Functional near-infrared spectroscopy (fNIRS) has already been used as a tool to assess patients with PPCS and may provide insight into the pathophysiology of rTMS treatment in patients with PPCS. Objective The primary objective of this research is to determine whether rTMS treatment improves symptom burden in patients with PPCS compared to sham treatment using the Rivermead postconcussion symptom questionnaire. The secondary objective is to explore the neuropathophysiological changes that occur following rTMS in participants with PPCS using fNIRS. Exploratory objectives include determining whether rTMS treatment in participants with PPCS will also improve quality of life, anxiety, depressive symptoms, cognition, posttraumatic stress, and function secondary to headaches. Methods A total of 44 adults (18-65 years old) with PPCS (>3 months to 5 years) will participate in a double-blind, sham-controlled, concealed allocation, randomized clinical trial. The participants will engage in either a 4-week rTMS treatment protocol or sham rTMS protocol (20 treatments). The left dorsolateral prefrontal cortex will be located through Montreal Neurologic Institute coordinates. The intensity of the rTMS treatment over the left dorsolateral prefrontal cortex will be 120% of resting motor threshold, with a frequency of 10 Hz, 10 trains of 60 pulses per train (total of 600 pulses), and intertrain interval of 45 seconds. Prior to starting the rTMS treatment, participant and injury characteristics, questionnaires (symptom burden, quality of life, depression, anxiety, cognition, and headache), and fNIRS assessment will be collected. Repeat questionnaires and fNIRS will occur immediately after rTMS treatment and at 1 month and 3 months post rTMS. Outcome parameters will be analyzed by a 2-way (treatment × time) mixed analysis of variance. Results As of May 6, 2021, 5 participants have been recruited for the study, and 3 have completed the rTMS protocol. The estimated completion date of the trial is May 2022. Conclusions This trial will expand our knowledge of how rTMS can be used as a treatment option of PPCS and will explore the neuropathophysiological response of rTMS through fNIRS analysis. Trial Registration ClinicalTrials.gov NCT04568369; https://clinicaltrials.gov/ct2/show/NCT04568369 International Registered Report Identifier (IRRID) DERR1-10.2196/31308
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Affiliation(s)
- Sané du Plessis
- Department of Clinical Neurosciences, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
- Hotchkiss Brain Institute, Calgary, AB, Canada
| | - Ibukunoluwa K Oni
- Department of Clinical Neurosciences, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
- Hotchkiss Brain Institute, Calgary, AB, Canada
- Department of Radiology, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
| | - Andrew P Lapointe
- Hotchkiss Brain Institute, Calgary, AB, Canada
- Department of Radiology, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
| | - Christina Campbell
- Department of Clinical Neurosciences, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
| | - Jeff F Dunn
- Department of Clinical Neurosciences, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
- Hotchkiss Brain Institute, Calgary, AB, Canada
- Department of Radiology, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
| | - Chantel T Debert
- Department of Clinical Neurosciences, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
- Hotchkiss Brain Institute, Calgary, AB, Canada
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Zhang F, Cheong D, Khan AF, Chen Y, Ding L, Yuan H. Correcting physiological noise in whole-head functional near-infrared spectroscopy. J Neurosci Methods 2021; 360:109262. [PMID: 34146592 DOI: 10.1016/j.jneumeth.2021.109262] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2021] [Revised: 05/20/2021] [Accepted: 06/14/2021] [Indexed: 10/21/2022]
Abstract
BACKGROUND Functional near-infrared spectroscopy (fNIRS) has been increasingly employed to monitor cerebral hemodynamics in normal and diseased conditions. However, fNIRS suffers from its susceptibility to superficial activity and systemic physiological noise. The objective of the study was to establish a noise reduction method for fNIRS in a whole-head montage. NEW METHOD We have developed an automated denoising method for whole-head fNIRS. A high-density montage consisting of 109 long-separation channels and 8 short-separation channels was used for recording. Auxiliary sensors were also used to measure motion, respiration and pulse simultaneously. The method incorporates principal component analysis and general linear model to identify and remove a globally uniform superficial component. Our denoising method was evaluated in experimental data acquired from a group of healthy human subjects during a visually cued motor task and further compared with a minimal preprocessing method and three established denoising methods in the literature. Quantitative metrics including contrast-to-noise ratio, within-subject standard deviation and adjusted coefficient of determination were evaluated. RESULTS After denoising, whole-head topography of fNIRS revealed focal activations concurrently in the primary motor and visual areas. COMPARISON WITH EXISTING METHODS Analysis showed that our method improves upon the four established preprocessing methods in the literature. CONCLUSIONS An automatic, effective and robust preprocessing pipeline was established for removing physiological noise in whole-head fNIRS recordings. Our method can enable fNIRS as a reliable tool in monitoring large-scale, network-level brain activities for clinical uses.
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Affiliation(s)
- Fan Zhang
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, USA
| | - Daniel Cheong
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, USA
| | - Ali F Khan
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, USA
| | - Yuxuan Chen
- School of Electrical and Computer Engineering, University of Oklahoma, Norman, OK, USA
| | - Lei Ding
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, USA; Institute for Biomedical Engineering, Science and Technology, University of Oklahoma, Norman, OK, USA
| | - Han Yuan
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, USA; Institute for Biomedical Engineering, Science and Technology, University of Oklahoma, Norman, OK, USA.
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von Lühmann A, Zheng Y, Ortega-Martinez A, Kiran S, Somers DC, Cronin-Golomb A, Awad LN, Ellis TD, Boas DA, Yücel MA. Towards Neuroscience of the Everyday World (NEW) using functional Near-Infrared Spectroscopy. CURRENT OPINION IN BIOMEDICAL ENGINEERING 2021; 18:100272. [PMID: 33709044 PMCID: PMC7943029 DOI: 10.1016/j.cobme.2021.100272] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Functional Near-Infrared Spectroscopy (fNIRS) assesses human brain activity by noninvasively measuring changes of cerebral hemoglobin concentrations caused by modulation of neuronal activity. Recent progress in signal processing and advances in system design, such as miniaturization, wearability and system sensitivity, have strengthened fNIRS as a viable and cost-effective complement to functional Magnetic Resonance Imaging (fMRI), expanding the repertoire of experimental studies that can be performed by the neuroscience community. The availability of fNIRS and Electroencephalography (EEG) for routine, increasingly unconstrained, and mobile brain imaging is leading towards a new domain that we term "Neuroscience of the Everyday World" (NEW). In this light, we review recent advances in hardware, study design and signal processing, and discuss challenges and future directions towards achieving NEW.
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Affiliation(s)
- Alexander von Lühmann
- Neurophotonics Center, Biomedical Engineering, Boston University, Boston, MA 02215, USA
- NIRx Medical Technologies, Berlin 13355, Germany
| | - Yilei Zheng
- Neurophotonics Center, Biomedical Engineering, Boston University, Boston, MA 02215, USA
- State Key Laboratory of Virtual Reality Technology and Systems, Beihang University, Beijing 100191, China
| | | | - Swathi Kiran
- Department of Speech, Language, and Hearing, Boston University, Boston, MA 02215, USA
| | - David C. Somers
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215, USA
| | - Alice Cronin-Golomb
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215, USA
| | - Louis N. Awad
- College of Health and Rehabilitation Sciences, Sargent College, Boston University, Boston, MA 02215, USA
| | - Terry D. Ellis
- College of Health and Rehabilitation Sciences, Sargent College, Boston University, Boston, MA 02215, USA
| | - David A. Boas
- Neurophotonics Center, Biomedical Engineering, Boston University, Boston, MA 02215, USA
| | - Meryem A. Yücel
- Neurophotonics Center, Biomedical Engineering, Boston University, Boston, MA 02215, USA
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Khan AF, Zhang F, Yuan H, Ding L. Brain-wide functional diffuse optical tomography of resting state networks. J Neural Eng 2021; 18. [PMID: 33946052 DOI: 10.1088/1741-2552/abfdf9] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2020] [Accepted: 05/04/2021] [Indexed: 02/07/2023]
Abstract
Objective.Diffuse optical tomography (DOT) has the potential in reconstructing resting state networks (RSNs) in human brains with high spatio-temporal resolutions and multiple contrasts. While several RSNs have been reported and successfully reconstructed using DOT, its full potential in recovering a collective set of distributed brain-wide networks with the number of RSNs close to those reported using functional magnetic resonance imaging (fMRI) has not been demonstrated.Approach.The present study developed a novel brain-wide DOT (BW-DOT) framework that integrates a cap-based whole-head optode placement system with multiple computational approaches, i.e. finite-element modeling, inverse source reconstruction, data-driven pattern recognition, and statistical correlation tomography, to reconstruct RSNs in dual contrasts of oxygenated (HbO) and deoxygenated hemoglobins (HbR).Main results.Our results from the proposed framework revealed a comprehensive set of RSNs and their subnetworks, which collectively cover almost the entire neocortical surface of the human brain, both at the group level and individual participants. The spatial patterns of these DOT RSNs suggest statistically significant similarities to fMRI RSN templates. Our results also reported the networks involving the medial prefrontal cortex and precuneus that had been missed in previous DOT studies. Furthermore, RSNs obtained from HbO and HbR suggest similarity in terms of both the number of RSN types reconstructed and their corresponding spatial patterns, while HbR RSNs show statistically more similarity to fMRI RSN templates and HbO RSNs indicate more bilateral patterns over two hemispheres. In addition, the BW-DOT framework allowed consistent reconstructions of RSNs across individuals and across recording sessions, indicating its high robustness and reproducibility, respectively.Significance.Our present results suggest the feasibility of using the BW-DOT, as a neuroimaging tool, in simultaneously mapping multiple RSNs and its potential values in studying RSNs, particularly in patient populations under diverse conditions and needs, due to its advantages in accessibility over fMRI.
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Affiliation(s)
- Ali F Khan
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, United States of America
| | - Fan Zhang
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, United States of America
| | - Han Yuan
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, United States of America.,Institute for Biomedical Engineering, Science, and Technology, University of Oklahoma, Norman, OK, United States of America
| | - Lei Ding
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, United States of America.,Institute for Biomedical Engineering, Science, and Technology, University of Oklahoma, Norman, OK, United States of America
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Luke R, Larson E, Shader MJ, Innes-Brown H, Van Yper L, Lee AKC, Sowman PF, McAlpine D. Analysis methods for measuring passive auditory fNIRS responses generated by a block-design paradigm. NEUROPHOTONICS 2021; 8:025008. [PMID: 34036117 PMCID: PMC8140612 DOI: 10.1117/1.nph.8.2.025008] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 04/28/2021] [Indexed: 05/20/2023]
Abstract
Significance: Functional near-infrared spectroscopy (fNIRS) is an increasingly popular tool in auditory research, but the range of analysis procedures employed across studies may complicate the interpretation of data. Aim: We aim to assess the impact of different analysis procedures on the morphology, detection, and lateralization of auditory responses in fNIRS. Specifically, we determine whether averaging or generalized linear model (GLM)-based analysis generates different experimental conclusions when applied to a block-protocol design. The impact of parameter selection of GLMs on detecting auditory-evoked responses was also quantified. Approach: 17 listeners were exposed to three commonly employed auditory stimuli: noise, speech, and silence. A block design, comprising sounds of 5 s duration and 10 to 20 s silent intervals, was employed. Results: Both analysis procedures generated similar response morphologies and amplitude estimates, and both indicated that responses to speech were significantly greater than to noise or silence. Neither approach indicated a significant effect of brain hemisphere on responses to speech. Methods to correct for systemic hemodynamic responses using short channels improved detection at the individual level. Conclusions: Consistent with theoretical considerations, simulations, and other experimental domains, GLM and averaging analyses generate the same group-level experimental conclusions. We release this dataset publicly for use in future development and optimization of algorithms.
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Affiliation(s)
- Robert Luke
- Macquarie University, Macquarie University Hearing & Department of Linguistics, Australian Hearing Hub, Sydney, New South Wales, Australia
- The Bionics Institute, Melbourne, Victoria, Australia
| | - Eric Larson
- University of Washington, Institute for Learning & Brain Sciences, Seattle, Washington, United States
| | - Maureen J. Shader
- The Bionics Institute, Melbourne, Victoria, Australia
- The University of Melbourne, Department of Medical Bionics, Melbourne, Victoria, Australia
| | - Hamish Innes-Brown
- The University of Melbourne, Department of Medical Bionics, Melbourne, Victoria, Australia
- Eriksholm Research Centre, Oticon A/S, Snekkersten, Denmark
| | - Lindsey Van Yper
- Macquarie University, Macquarie University Hearing & Department of Linguistics, Australian Hearing Hub, Sydney, New South Wales, Australia
| | - Adrian K. C. Lee
- University of Washington, Institute for Learning & Brain Sciences, Seattle, Washington, United States
- University of Washington, Department of Speech & Hearing Sciences and Institute for Learning & Brain Sciences, Seattle, Washington, United States
| | - Paul F. Sowman
- Macquarie University, Department of Cognitive Science, Faculty of Medicine, Health and Human Sciences, Sydney, New South Wales, Australia
| | - David McAlpine
- Macquarie University, Macquarie University Hearing & Department of Linguistics, Australian Hearing Hub, Sydney, New South Wales, Australia
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Cai L, Nitta T, Yokota S, Obata T, Okada E, Kawaguchi H. Targeting brain regions of interest in functional near-infrared spectroscopy-Scalp-cortex correlation using subject-specific light propagation models. Hum Brain Mapp 2021; 42:1969-1986. [PMID: 33621388 PMCID: PMC8046049 DOI: 10.1002/hbm.25367] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Revised: 12/05/2020] [Accepted: 01/31/2021] [Indexed: 11/11/2022] Open
Abstract
Targeting specific brain regions of interest by the accurate positioning of optodes (emission and detection probes) on the scalp remains a challenge for functional near‐infrared spectroscopy (fNIRS). Since fNIRS data does not provide any anatomical information on the brain cortex, establishing the scalp‐cortex correlation (SCC) between emission‐detection probe pairs on the scalp and the underlying brain regions in fNIRS measurements is extremely important. A conventional SCC is obtained by a geometrical point‐to‐point manner and ignores the effect of light scattering in the head tissue that occurs in actual fNIRS measurements. Here, we developed a sensitivity‐based matching (SBM) method that incorporated the broad spatial sensitivity of the probe pair due to light scattering into the SCC for fNIRS. The SCC was analyzed between head surface fiducial points determined by the international 10–10 system and automated anatomical labeling brain regions for 45 subject‐specific head models. The performance of the SBM method was compared with that of three conventional geometrical matching (GM) methods. We reveal that the light scattering and individual anatomical differences in the head affect the SCC, which indicates that the SBM method is compulsory to obtain the precise SCC. The SBM method enables us to evaluate the activity of cortical regions that are overlooked in the SCC obtained by conventional GM methods. Together, the SBM method could be a promising approach to guide fNIRS users in designing their probe arrangements and in explaining their measurement data.
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Affiliation(s)
- Lin Cai
- Department of Electronics and Electrical Engineering, Keio University, Yokohama, Japan
| | - Tomonori Nitta
- Department of Electronics and Electrical Engineering, Keio University, Yokohama, Japan
| | - Sho Yokota
- Department of Electronics and Electrical Engineering, Keio University, Yokohama, Japan
| | - Takayuki Obata
- Department of Molecular Imaging and Theranostics, National Institute of Radiological Sciences, National Institutes for Quantum and Radiological Science and Technology, Chiba, Japan
| | - Eiji Okada
- Department of Electronics and Electrical Engineering, Keio University, Yokohama, Japan
| | - Hiroshi Kawaguchi
- Department of Electronics and Electrical Engineering, Keio University, Yokohama, Japan.,Department of Molecular Imaging and Theranostics, National Institute of Radiological Sciences, National Institutes for Quantum and Radiological Science and Technology, Chiba, Japan.,Human Informatics and Interaction Research Institute, National Institute of Advanced Industrial Science and Technology, Ibaraki, Japan
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Mahmoudzadeh M, Wallois F, Tir M, Krystkowiak P, Lefranc M. Cortical hemodynamic mapping of subthalamic nucleus deep brain stimulation in Parkinsonian patients, using high-density functional near-infrared spectroscopy. PLoS One 2021; 16:e0245188. [PMID: 33493171 PMCID: PMC7833160 DOI: 10.1371/journal.pone.0245188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2020] [Accepted: 12/23/2020] [Indexed: 12/02/2022] Open
Abstract
Subthalamic nucleus deep brain stimulation (STN-DBS) is an effective treatment for idiopathic Parkinson's disease. Despite recent progress, the mechanisms responsible for the technique's effectiveness have yet to be fully elucidated. The purpose of the present study was to gain new insights into the interactions between STN-DBS and cortical network activity. We therefore combined high-resolution functional near-infrared spectroscopy with low-resolution electroencephalography in seven Parkinsonian patients on STN-DBS, and measured cortical haemodynamic changes at rest and during hand movement in the presence and absence of stimulation (the ON-stim and OFF-stim conditions, respectively) in the off-drug condition. The relative changes in oxyhaemoglobin [HbO], deoxyhaemoglobin [HbR], and total haemoglobin [HbT] levels were analyzed continuously. At rest, the [HbO], [HbR], and [HbT] over the bilateral sensorimotor (SM), premotor (PM) and dorsolateral prefrontal (DLPF) cortices decreased steadily throughout the duration of stimulation, relative to the OFF-stim condition. During hand movement in the OFF-stim condition, [HbO] increased and [HbR] decreased concomitantly over the contralateral SM cortex (as a result of neurovascular coupling), and [HbO], [HbR], and [HbT] increased concomitantly in the dorsolateral prefrontal cortex (DLPFC)-suggesting an increase in blood volume in this brain area. During hand movement with STN-DBS, the increase in [HbO] was over the contralateral SM and PM cortices was significantly lower than in the OFF-stim condition, as was the decrease in [HbO] and [HbT] in the DLPFC. Our results indicate that STN-DBS is associated with a reduction in blood volume over the SM, PM and DLPF cortices, regardless of whether or not the patient is performing a task. This particular effect on cortical networks might explain not only STN-DBS's clinical effectiveness but also some of the associated adverse effects.
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Affiliation(s)
| | | | - Mélissa Tir
- Neurosurgery Department, CHU Amiens-Picardie, Amiens, France
| | - Pierre Krystkowiak
- Neurology Department, CHU Amiens-Picardie, Amiens, France
- Laboratory of Functional Neurosciences, University of Picardie Jules Verne, Amiens, France
| | - Michel Lefranc
- Neurosurgery Department, CHU Amiens-Picardie, Amiens, France
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Noah JA, Zhang X, Dravida S, DiCocco C, Suzuki T, Aslin RN, Tachtsidis I, Hirsch J. Comparison of short-channel separation and spatial domain filtering for removal of non-neural components in functional near-infrared spectroscopy signals. NEUROPHOTONICS 2021; 8:015004. [PMID: 33598505 PMCID: PMC7881368 DOI: 10.1117/1.nph.8.1.015004] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Accepted: 01/19/2021] [Indexed: 05/03/2023]
Abstract
Significance: With the increasing popularity of functional near-infrared spectroscopy (fNIRS), the need to determine localization of the source and nature of the signals has grown. Aim: We compare strategies for removal of non-neural signals for a finger-thumb tapping task, which shows responses in contralateral motor cortex and a visual checkerboard viewing task that produces activity within the occipital lobe. Approach: We compare temporal regression strategies using short-channel separation to a spatial principal component (PC) filter that removes global signals present in all channels. For short-channel temporal regression, we compare non-neural signal removal using first and combined first and second PCs from a broad distribution of short channels to limited distribution on the forehead. Results: Temporal regression of non-neural information from broadly distributed short channels did not differ from forehead-only distribution. Spatial PC filtering provides results similar to short-channel separation using the temporal domain. Utilizing both first and second PCs from short channels removes additional non-neural information. Conclusions: We conclude that short-channel information in the temporal domain and spatial domain regression filtering methods remove similar non-neural components represented in scalp hemodynamics from fNIRS signals and that either technique is sufficient to remove non-neural components.
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Affiliation(s)
- J. Adam Noah
- Yale School of Medicine, Department of Psychiatry, Brain Function Laboratory, New Haven, Connecticut, United States
| | - Xian Zhang
- Yale School of Medicine, Department of Psychiatry, Brain Function Laboratory, New Haven, Connecticut, United States
| | - Swethasri Dravida
- Yale School of Medicine, Interdepartmental Neuroscience Program New Haven, Connecticut, United States
| | - Courtney DiCocco
- Yale School of Medicine, Brain Function Laboratory, New Haven, Connecticut, United States
| | - Tatsuya Suzuki
- Meiji University, Graduate School of Science and Technology, Electrical Engineering Program, Kawasaki, Japan
- Meiji University, School of Science and Technology, Department of Electronics and Bioinformatics, Kawasaki, Japan
| | - Richard N. Aslin
- Haskins Laboratories, New Haven, Connecticut, United States
- Yale University, Department of Psychology, New Haven, Connecticut, United States
| | - Ilias Tachtsidis
- University College London, Department of Medical Physics and Biomedical Engineering, London, United Kingdom
| | - Joy Hirsch
- Yale School of Medicine, Department of Psychiatry, Brain Function Laboratory, New Haven, Connecticut, United States
- University College London, Department of Medical Physics and Biomedical Engineering, London, United Kingdom
- Yale School of Medicine, Department of Neuroscience, New Haven, Connecticut, United States
- Yale School of Medicine, Department of Comparative Medicine, New Haven, Connecticut, United States
- Address all correspondence to Joy Hirsch,
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Chen Y, Tang J, Chen Y, Farrand J, Craft MA, Carlson BW, Yuan H. Amplitude of fNIRS Resting-State Global Signal Is Related to EEG Vigilance Measures: A Simultaneous fNIRS and EEG Study. Front Neurosci 2020; 14:560878. [PMID: 33343275 PMCID: PMC7744746 DOI: 10.3389/fnins.2020.560878] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2020] [Accepted: 11/11/2020] [Indexed: 12/21/2022] Open
Abstract
Recently, functional near-infrared spectroscopy (fNIRS) has been utilized to image the hemodynamic activities and connectivity in the human brain. With the advantage of economic efficiency, portability, and fewer physical constraints, fNIRS enables studying of the human brain at versatile environment and various body positions, including at bed side and during exercise, which complements the use of functional magnetic resonance imaging (fMRI). However, like fMRI, fNIRS imaging can be influenced by the presence of a strong global component. Yet, the nature of the global signal in fNIRS has not been established. In this study, we investigated the relationship between fNIRS global signal and electroencephalogram (EEG) vigilance using simultaneous recordings in resting healthy subjects in high-density and whole-head montage. In Experiment 1, data were acquired at supine, sitting, and standing positions. Results found that the factor of body positions significantly affected the amplitude of the resting-state fNIRS global signal, prominently in the frequency range of 0.05-0.1 Hz but not in the very low frequency range of less than 0.05 Hz. As a control, the task-induced fNIRS or EEG responses to auditory stimuli did not differ across body positions. However, EEG vigilance plays a modulatory role in the fNIRS signals in the frequency range of less than 0.05 Hz: resting-state sessions of low EEG vigilance measures are associated with high amplitudes of fNIRS global signals. Moreover, in Experiment 2, we further examined the epoch-to-epoch fluctuations in concurrent fNIRS and EEG data acquired from a separate group of subjects and found a negative temporal correlation between EEG vigilance measures and fNIRS global signal amplitudes. Our study for the first time revealed that vigilance as a neurophysiological factor modulates the resting-state dynamics of fNIRS, which have important implications for understanding and processing the noises in fNIRS signals.
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Affiliation(s)
- Yuxuan Chen
- School of Electrical and Computer Engineering, University of Oklahoma, Norman, OK, United States
| | - Julia Tang
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, United States
| | - Yafen Chen
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, United States
| | - Jesse Farrand
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, United States
| | - Melissa A. Craft
- Fran and Earl Ziegler College of Nursing, University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States
| | - Barbara W. Carlson
- Fran and Earl Ziegler College of Nursing, University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States
| | - Han Yuan
- Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK, United States
- Institute for Biomedical Engineering, Science, and Technology, University of Oklahoma, Norman, OK, United States
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