Methane emissions partially offset "blue carbon" burial in mangroves

Comprehensive profiles of sulfur cycling microbial communities along a mangrove sediment depth

The sulfur (S) cycle is an important biogeochemical cycle with profound implications for both cellular- and ecosystem-level processes by diverse microorganisms. Mangrove sediments are a hotspot of biogeochemical cycling, especially for the S cycle with high concentrations of S compounds. Previous studies have mainly focused on some specific inorganic S cycling processes without paying specific attention to the overall S-cycling communities and processes as well as organic S metabolism. In this study, we comprehensively analyzed the distribution, ecological network and assembly mechanisms of S cycling microbial communities and their changes with sediment depths using metagenome sequencing data. The results showed that the abundance of gene families involved in sulfur oxidation, assimilatory sulfate reduction, and dimethylsulfoniopropionate (DMSP) cleavage and demethylation decreased with sediment depths, while those involved in S reduction and dimethyl sulfide (DMS) transformation showed an opposite trend. Specifically, glpE, responsible for converting S2O32- to SO32-, showed the highest abundance in the surface sediment and decreased with sediment depths; in contrast, high abundances of dmsA, responsible for converting dimethyl sulfoxide (DMSO) to DMS, were identified and increased with sediment depths. We identified Pseudomonas and Streptomyces as the main S-cycling microorganisms, while Thermococcus could play an import role in microbial network connections in the S-cycling microbial community. Our statistical analysis showed that both taxonomical and functional compositions were generally shaped by stochastic processes, while the functional composition of organic S metabolism showed a transition from stochastic to deterministic processes. This study provides a novel perspective of diversity distribution of S-cycling functions and taxa as well as their potential assembly mechanisms, which has important implications for maintaining mangrove ecosystem functions.

Rethinking microbially driven methane formation in mangrove wetlands

Mangrove wetlands contribute to climate change mitigation through efficient carbon burial, yet microbial methanogenesis offsets these climate benefits. We review the diversity of methanogenic microorganisms in mangrove sediments, present the unrecognized role of bacteria on methanogenesis, and highlight the significance of distinguishing various methanogenic pathways to assess mangrove climate benefits.

Colonization characteristics and dynamic transition of archaea communities on polyethylene and polypropylene microplastics in the sediments of mangrove ecosystems

Microplastics are a growing concern in mangrove ecosystems; however, their effects on archaeal communities and related ecological processes remain unclear. We conducted in situ biofilm-enrichment experiments to investigate the ecological influence of polyethylene (PE) and polypropylene microplastics on archaeal communities in the sediments of mangrove ecosystems. The archaeal community present on microplastics was distinct from that of the surrounding sediments at an early stage but became increasingly similar over time. Bathyarchaeota, Thaumarchaeota, Euryarchaeota, and Asgardaeota were the most abundant phyla. Methanolobus, an archaeal biomarker, was enriched in PE biofilms, and significantly controlled by homogeneous selection in the plastisphere, indicating an increased potential risk of methane emission. The dominant archaeal assembly process in the sediments was deterministic (58.85%-70.47%), while that of the PE biofilm changed from stochastic to deterministic during the experiment. The network of PE plastispheres showed less complexity and competitive links, and higher modularity and stability than that of sediments. Functional prediction showed an increase in aerobic ammonia oxidation during the experiment, whereas methanogenesis and chemoheterotrophy were significantly higher in the plastisphere. This study provides novel insights into the impact of microplastic pollution on archaeal communities and their mediating ecological functions in mangrove ecosystems.

Greenhouse gas fluxes of different land uses in mangrove ecosystem of East Kalimantan, Indonesia

BACKGROUND

Mangrove ecosystems exhibit significant carbon storage and sequestration. Its capacity to store and sequester significant amounts of carbon makes this ecosystem very important for climate change mitigation. Indonesia, owing to the largest mangrove cover in the world, has approximately 3.14 PgC stored in the mangroves, or about 33% of all carbon stored in coastal ecosystems globally. Unfortunately, our comprehensive understanding of carbon flux is hampered by the incomplete repertoire of field measurement data, especially from mangrove ecosystem-rich regions such as Indonesia and Asia Pacific. This study fills the gap in greenhouse gases (GHGs) flux studies in mangrove ecosystems in Indonesia by quantifying the soil CO2 and CH4 fluxes for different land use types in mangrove ecosystems, i.e., secondary mangrove (SM), restored mangrove (RM), pond embankment (PE) and active aquaculture pond (AP). Environmental parameters such as soil pore salinity, soil pore water pH, soil temperature, air temperature, air humidity and rainfall are also measured.

RESULTS

GHG fluxes characteristics varied between land use types and ecological conditions. Secondary mangrove and exposed pond embankment are potential GHG flux sources (68.9 ± 7.0 and 58.5 ± 6.2 MgCO2e ha- 1 yr- 1, respectively). Aquaculture pond exhibits the lowest GHG fluxes among other land use types due to constant inundation that serve as a barrier for the release of GHG fluxes to the atmosphere. We found weak relationships between soil CO2 and CH4 fluxes and environmental parameters.

CONCLUSIONS

The data and information on GHG fluxes from different land use types in the mangrove ecosystem will be of importance to accurately assess the potential of the mangrove ecosystem to sequester and emit GHGs. This will support the GHG emission reduction target and strategy that had been set up by the Indonesian Government in its Nationally Determined Contributions (NDC) and Indonesia's 2030 Forest and Other Land Use (FOLU) Net Sink.

Soil greenhouse gas emissions from dead and natural mangrove forests in Southeastern Brazil

Mangroves forests may be important sinks of carbon in coastal areas but upon their death, these forests may become net sources of carbon dioxide (CO2) and methane (CH4) to the atmosphere. Here we assessed the spatial and temporal variability in soil CO2 and CH4 fluxes from dead mangrove forests and paired intact sites in SE-Brazil. Our findings demonstrated that during warmer and drier conditions, CO2 soil flux was 183 % higher in live mangrove forests when compared to the dead mangrove forests. Soil CH4 emissions in live forests were > 1.4-fold higher than the global mangrove average. During the wet season, soil GHG emissions dropped significantly at all sites. During warmer conditions, mangroves were net sources of GHG, with a potential warming effect (GWP100) of 32.9 ± 10.2 (±SE) Mg CO2e ha-1 y-1. Overall, we found that dead mangroves did not release great amounts of GHG after three years of forest loss.

Replacing Spartina alterniflora with northward-afforested mangroves has the potential to acquire extra blue carbon

Climate change provides an opportunity for the northward expansion of mangroves, and thus, the afforestation of mangroves at higher latitude areas presents an achievable way for coastal restoration, especially where invasive species S. alterniflora needs to be clipped. However, it is unclear whether replacing S. alterniflora with northward-afforested mangroves would benefit carbon sequestration. In the study, we examined the key CO2 and CH4 exchange processes in a young (3 yr) northward-afforested wetland dominated by K. obovata. We also collected soil cores from various ages (3, 15, 30, and 60 years) to analyze the carbon storage characteristics of mangrove stands using a space-for-time substitution approach. Our findings revealed that the young northward mangroves exhibited obvious seasonal variations in net ecosystem CO2 exchange (NEE) and functioned as a moderate carbon sink, with an average annual NEE of -107.9 g C m-2 yr-1. Additionally, the CH4 emissions from the northward mangroves were lower in comparison to natural mangroves, with the primary source being the soil. Furthermore, when comparing the vertical distribution of soil carbon, it became evident that both S. alterniflora and mangroves contributed to organic carbon accumulation in the upper soil layers. Our study also identified a clear correlation that the biomass and carbon stocks of mangroves increased logarithmically with age (R2 = 0.69, p < 0.001). Notably, both vegetation and soil carbon stocks (especially in the deeper layers) of the 15 yr northward mangroves, were markedly higher than those of S. alterniflora. This suggests that replacing S. alterniflora with northward-afforested mangroves is an effective long-term strategy for future coasts to enhance blue carbon sequestration.

Flushing emissions of methane and carbon dioxide from mangrove soils during tidal cycles

Mangroves are transition areas connecting land, freshwater, and the ocean, where a great amount of organic carbon accumulates in the soil, forming a considerable carbon sink. However, the soil might also be a source of greenhouse gas (GHG) emissions. This study hypothesized that measuring GHG emissions solely during low tides can represent diurnal GHG emissions in mangroves. Methane (CH4) and carbon dioxide (CO2) emissions were quantified during tidal cycles using an ultraportable gas analyzer in Kandelia obovata (without pneumatophores) and Avicennia marina (with pneumatophores) mangroves in summer and fall. The results showed that the CH4 fluxes varied greatly during tidal cycles, from -1.25 to 96.24 μmol CH4 m-2 h-1 for K. obovata and from 2.86 to 2662.00 μmol CH4 m-2 h-1 for A. marina. The CO2 fluxes ranged from -4.23 to 20.65 mmol CO2 m-2 h-1 for K. obovata and from 0.09 to 24.69 mmol CO2 m-2 h-1 for A. marina. The diurnal variation in GHG levels in mangroves is predominantly driven by tidal cycles. The peak emissions of CH4 and CO2 were noted at the beginning of the flooding tide, rather than during daytime or nighttime. While the patterns of the CO2 fluxes during tidal cycles were similar between K. obovata and A. marina mangroves, their CH4 flux patterns during the tidal cycles differed. Possibly due to different transport mechanisms, CO2 emissions are primarily influenced by surface soils, whereas CH4 is predominantly emitted from deeper soils, thus being influenced by root structures. To reduce the uncertainty in measuring GHG emissions in mangrove soils during a tidal cycle, it is advisable to increase the number of GHG flux measurements during the period spanning 30 min before and after the beginning of the flooding and ebbing tides.

Seasonal Change of Sediment Microbial Communities and Methane Emission in Young and Old Mangrove Forests in Xuan Thuy National Park

Microbial communities in mangrove forests have recently been intensively investigated to explain the ecosystem function of mangroves. In this study, the soil microbial communities under young (<11 years-old) and old (>17 years-old) mangroves have been studied during dry and wet seasons. In addition, biogeochemical properties of sediments and methane emission from the two different mangrove ages were measured. The results showed that young and old mangrove soil microbial communities were significantly different on both seasons. Seasons seem to affect microbial communities more than the mangrove age does. Proteobacteria and Chloroflexi were two top abundant phyla showing >15%. Physio-chemical properties of sediment samples showed no significant difference between mangrove ages, seasons, nor depth levels, except for TOC showing significant difference between the two seasons. The methane emission rates from the mangroves varied depending on seasons and ages of the mangrove. However, this did not show significant correlation with the microbial community shifts, suggesting that abundance of methanogens was not the driving factor for mangrove soil microbial communities.

Carbon removal and climate change mitigation by seaweed farming: A state of knowledge review

The pressing need to mitigate the effects of climate change is driving the development of novel approaches for carbon dioxide removal (CDR) from the atmosphere, with the ocean playing a central role in the portfolio of solutions. The expansion of seaweed farming is increasingly considered as one of the potential CDR avenues among government and private sectors. Yet, comprehensive assessments examining whether farming can lead to tangible climate change mitigation remain limited. Here we examine the results of over 100 publications to synthesize evidence regarding the CDR capacity of seaweed farms and review the different interventions through which an expansion of seaweed farming may contribute to climate change mitigation. We find that presently, the majority of the carbon fixed by seaweeds is stored in short-term carbon reservoirs (e.g., seaweed products) and that only a minority of the carbon ends up in long-term reservoirs that are likely to fit within existing international accounting frameworks (e.g., marine sediments). Additionally, the tiny global area cultivated to date (0.06 % of the estimated wild seaweed extent) limits the global role of seaweed farming in climate change mitigation in the present and mid-term future. A first-order estimate using the best available data suggests that, at present, even in a low emissions scenario, any carbon removal capacity provided by seaweed farms globally is likely to be offset by their emissions (median global balance net emitter: -0.11 Tg C yr-1; range -2.07-1.95 Tg C yr-1), as most of a seaweed farms' energy and materials currently depend on fossil fuels. Enhancing any potential CDR though seaweed farming will thus require decarbonizing of supply chains, directing harvested biomass to long-term carbon storage products, expanding farming outside traditional cultivation areas, and developing robust models tracing the fate of seaweed carbon. This will present novel scientific (e.g., verifying permanence of seaweed carbon), engineering (e.g., developing farms in wave exposed areas), and economic challenges (e.g., increase market demand, lower costs, decarbonize at scale), many of which are only beginning to be addressed.

The influence of tide-brought nutrients on microbial carbon metabolic profiles of mangrove sediments

Mangrove ecosystems in the intertidal zone are continually affected by tidal inundation, but the impact of tidal-driven nutrient inputs upon bacterial communities and carbon metabolic features in mangrove surface sediments remains underexplored, and the differences in such impacts across backgrounds are not known. Here, two mangrove habitats with contrasting nutrient backgrounds in Shenzhen Bay and Daya Bay in Shenzhen City, China, respectively, were studied to investigate the effects of varying tidal nutrient inputs (especially dissolved inorganic nitrogen and PO43--P) on bacterial community composition and functioning in sediment via field sampling, 16S rDNA amplicon sequencing, and the quantitative potential of microbial element cycling. Results showed that tidal input increased Shenzhen Bay mangrove's eutrophication level whereas it maintained the Daya Bay mangrove's relatively oligotrophic status. Dissolved inorganic nitrogen and PO43--P levels in Shenzhen Bay were respectively 12.6-39.6 and 7.3-29.1 times higher than those in Daya Bay (p < 0.05). In terms of microbial features, Desulfobacteraceae was the dominant family in Shenzhen Bay, while the Anaerolineaceae family dominated in Daya Bay. Co-occurrence network analysis revealed more interconnected and complex microbial networks in Shenzhen Bay. The quantitative gene-chip analysis uncovered more carbon-related functional genes (including carbon degradation and fixation) enriched in Shenzhen Bay's sediment microbial communities than Daya Bay's. Partial least squares path modeling indicated that tidal behavior directly affected mangrove sediments' physicochemical characteristics, with cascading effects shaping microbial diversity and C-cycling function. Altogether, these findings demonstrate that how tides influence the microbial carbon cycle in mangrove sediments is co-correlated with the concentration of nutrient inputs and background status of sediment. This work offers an insightful lens for better understanding bacterial community structure and carbon metabolic features in mangrove sediments under their tidal influences. It provides a theoretical basis to better evaluate and protect mangroves in the context of global change.

High methane concentrations in tidal salt marsh soils: Where does the methane go?

Tidal salt marshes produce and emit CH4 . Therefore, it is critical to understand the biogeochemical controls that regulate CH4 spatial and temporal dynamics in wetlands. The prevailing paradigm assumes that acetoclastic methanogenesis is the dominant pathway for CH4 production, and higher salinity concentrations inhibit CH4 production in salt marshes. Recent evidence shows that CH4 is produced within salt marshes via methylotrophic methanogenesis, a process not inhibited by sulfate reduction. To further explore this conundrum, we performed measurements of soil-atmosphere CH4 and CO2 fluxes coupled with depth profiles of soil CH4 and CO2 pore water gas concentrations, stable and radioisotopes, pore water chemistry, and microbial community composition to assess CH4 production and fate within a temperate tidal salt marsh. We found unexpectedly high CH4 concentrations up to 145,000 μmol mol-1 positively correlated with S2- (salinity range: 6.6-14.5 ppt). Despite large CH4 production within the soil, soil-atmosphere CH4 fluxes were low but with higher emissions and extreme variability during plant senescence (84.3 ± 684.4 nmol m-2  s-1 ). CH4 and CO2 within the soil pore water were produced from young carbon, with most Δ14 C-CH4 and Δ14 C-CO2 values at or above modern. We found evidence that CH4 within soils was produced by methylotrophic and hydrogenotrophic methanogenesis. Several pathways exist after CH4 is produced, including diffusion into the atmosphere, CH4 oxidation, and lateral export to adjacent tidal creeks; the latter being the most likely dominant flux. Our findings demonstrate that CH4 production and fluxes are biogeochemically heterogeneous, with multiple processes and pathways that can co-occur and vary in importance over the year. This study highlights the potential for high CH4 production, the need to understand the underlying biogeochemical controls, and the challenges of evaluating CH4 budgets and blue carbon in salt marshes.

Multiple drivers for carbon stocks and fluxes in different types of mangroves

Mangroves are highly efficient in sequestering carbon from the atmosphere and can accumulate carbon in sediments for millennials. However, The fate of mangrove carbon has not been well constrained due to the lack of data on different pools of sediment carbon sinks and sources. This study examined the variation of carbon stocks and fluxes at the water-sediment-air interface in both estuarine mangroves (natural: Mai Po, restored: Gei Wai) and oceanic mangroves (Ting Kok). There are divergent patterns in biogeochemical variables at the sediment-water-air interface, likely due to significant variation within sites. Total sediment carbon stocks (TCs) ranked in the order of restored estuarine mangroves (392.5 ± 8.8 Mg ha-1), natural estuarine mangroves affected by aquaculture (315.2 ± 21.4 Mg ha-1) and oceanic mangroves (229.1 ± 32.3 Mg ha-1). Sediment organic carbon stocks (SOC) and inorganic carbon stocks (SIC) accounted for 84.1-90.2 % and 9.8-15.9 % of TC, respectively. The highest sediment-air CO2 and CH4 fluxes occurred in restored and natural estuarine mangroves affected by aquaculture, respectively. The isotope of CO2 fluxes (δ13C-CO2) indicates higher contributions from the degradation of mangrove-derived organic carbon in restored (-25.94 ‰ ± 3.37 ‰) and natural estuarine mangroves affected by aquaculture (-25.54 ‰ ± 0.96 ‰) than in oceanic mangroves (-21.55 ‰ ± 1.36 ‰). The isotope of CH4 fluxes (δ13C-CH4) indicates CH4 production dominated by acetate fermentation in restored estuarine mangroves but dominated by the reduction of CO2 for other sites. Future studies should better constrain the fate of mangrove carbon by considering local drivers.

Carbon sequestration and climate change mitigation using macroalgae: a state of knowledge review

The conservation, restoration, and improved management of terrestrial forests significantly contributes to mitigate climate change and its impacts, as well as providing numerous co-benefits. The pressing need to reduce emissions and increase carbon removal from the atmosphere is now also leading to the development of natural climate solutions in the ocean. Interest in the carbon sequestration potential of underwater macroalgal forests is growing rapidly among policy, conservation, and corporate sectors. Yet, our understanding of whether carbon sequestration from macroalgal forests can lead to tangible climate change mitigation remains severely limited, hampering their inclusion in international policy or carbon finance frameworks. Here, we examine the results of over 180 publications to synthesise evidence regarding macroalgal forest carbon sequestration potential. We show that research efforts on macroalgae carbon sequestration are heavily skewed towards particulate organic carbon (POC) pathways (77% of data publications), and that carbon fixation is the most studied flux (55%). Fluxes leading directly to carbon sequestration (e.g. carbon export or burial in marine sediments) remain poorly resolved, likely hindering regional or country-level assessments of carbon sequestration potential, which are only available from 17 of the 150 countries where macroalgal forests occur. To solve this issue, we present a framework to categorize coastlines according to their carbon sequestration potential. Finally, we review the multiple avenues through which this sequestration can translate into climate change mitigation capacity, which largely depends on whether management interventions can increase carbon removal above a natural baseline or avoid further carbon emissions. We find that conservation, restoration and afforestation interventions on macroalgal forests can potentially lead to carbon removal in the order of 10's of Tg C globally. Although this is lower than current estimates of natural sequestration value of all macroalgal habitats (61-268 Tg C year-1 ), it suggests that macroalgal forests could add to the total mitigation potential of coastal blue carbon ecosystems, and offer valuable mitigation opportunities in polar and temperate areas where blue carbon mitigation is currently low. Operationalizing that potential will necessitate the development of models that reliably estimate the proportion of production sequestered, improvements in macroalgae carbon fingerprinting techniques, and a rethinking of carbon accounting methodologies. The ocean provides major opportunities to mitigate and adapt to climate change, and the largest coastal vegetated habitat on Earth should not be ignored simply because it does not fit into existing frameworks.

Land use drives large CH4 fluxes from a highly urbanized Indian estuary

There is growing awareness of the need to better constrain the contribution of atmospheric methane (CH4) fluxes from urbanized estuaries due to the high global warming potential of CH4 and the accelerating growth of urban expansion. This study undertook seasonal sampling campaigns to understand the impact of urbanization on atmospheric CH4 fluxes and their drivers in a large, tropical estuary in India. Overall, the study found that the Cochin estuary emitted large amounts of CH4 (398.8 ± 141.6 μmolm-2d-1) to the atmosphere with CH4 hotspots reaching up to 939.7 μmolm-2d-1 were identified. The strongest drivers of CH4 dynamics in different anthropogenically impacted zones were traced. The source of organic matter for CH4 production was revealed to be terrestrial C3 plants, autochthonous production, marine phytoplankton, and sewage inputs. The study suggests that monsoonal urbanized tropical estuaries may be an important but under-recognized element of the global CH4 budget.

Coastal blue carbon in China as a nature-based solution toward carbon neutrality

To achieve the Paris Agreement, China pledged to become "Carbon Neutral" by the 2060s. In addition to massive decarbonization, this would require significant changes in ecosystems toward negative CO2 emissions. The ability of coastal blue carbon ecosystems (BCEs), including mangrove, salt marsh, and seagrass meadows, to sequester large amounts of CO2 makes their conservation and restoration an important "nature-based solution (NbS)" for climate adaptation and mitigation. In this review, we examine how BCEs in China can contribute to climate mitigation. On the national scale, the BCEs in China store up to 118 Tg C across a total area of 1,440,377 ha, including over 75% as unvegetated tidal flats. The annual sedimental C burial of these BCEs reaches up to 2.06 Tg C year-1, of which most occurs in salt marshes and tidal flats. The lateral C flux of mangroves and salt marshes contributes to 1.17 Tg C year-1 along the Chinese coastline. Conservation and restoration of BCEs benefit climate change mitigation and provide other ecological services with a value of $32,000 ha-1 year-1. The potential practices and technologies that can be implemented in China to improve BCE C sequestration, including their constraints and feasibility, are also outlined. Future directions are suggested to improve blue carbon estimates on aerial extent, carbon stocks, sequestration, and mitigation potential. Restoring and preserving BCEs would be a cost-effective step to achieve Carbon Neutral by 2060 in China despite various barriers that should be removed.

Effects of conversion of coastal marshes to aquaculture ponds on sediment anaerobic CO2 production and emission in a subtropical estuary of China

The extensive conversion of carbon-rich coastal wetland to aquaculture ponds in the Asian Pacific region has caused significant changes to the sediment properties and carbon cycling. Using field sampling and incubation experiments, the sediment anaerobic CO₂ production and CO₂ emission flux were compared between a brackish marsh and the nearby constructed aquaculture ponds in the Min River Estuary in southeastern China over a three-year period. Marsh sediment had a higher total carbon and lower C:N ratio than aquaculture pond sediment, suggesting the importance of marsh vegetation in supplying labile organic carbon to the sediment. Conversion to aquaculture ponds significantly decreased sediment anaerobic CO₂ production rates by 69.2% compared to the brackish marsh, but increased CO₂ emission, turning the CO₂ sink (-490.8 ± 42.0 mg m^-2 h^-1 in brackish marsh) into a source (6.2 ± 3.9 mg m^-2 h^-1 in aquaculture pond). Clipping the marsh vegetation resulted in the highest CO₂ emission flux (382.6 ± 46.7 mg m^-2 h^-1), highlighting the critical role of marsh vegetation in capturing and sequestering carbon. Sediment anaerobic CO₂ production and CO₂ uptake (in brackish marsh) and emission (in aquaculture ponds) were highest in the summer, followed by autumn, spring and winter. Redundancy analysis and structural equation modeling showed that the changes of sediment temperature, salinity and total carbon content accounted for more than 50% of the variance in CO₂ production and emission. Overall, the results indicate that vegetation clearing was the main cause of change in CO₂ production and emission in the land conversion, and marsh replantation should be a primary strategy to mitigate the climate impact of the aquaculture sector.

A bibliometric study on carbon cycling in vegetated blue carbon ecosystems

Understanding carbon cycling in blue carbon ecosystems is key to sequestrating more carbon in these ecosystems to mitigate climate change. However, limited information is available on the basic characteristics of publications, research hotspots, research frontiers, and the evolution of topics related to carbon cycling in different blue carbon ecosystems. Here, we conducted bibliometric analysis on carbon cycling in salt marsh, mangrove, and seagrass ecosystems. The results showed that interest in this field has dramatically increased with time, particularly for mangroves. The USA has substantially contributed to the research on all ecosystems. Research hotspots for salt marshes were sedimentation process, carbon sequestration, carbon emissions, lateral carbon exchange, litter decomposition, plant carbon fixation, and carbon sources. In addition, biomass estimation by allometric equations was a hotspot for mangroves, and carbonate cycling and ocean acidification were hotspots for seagrasses. Topics involving energy flow, such as productivity, food webs, and decomposition, were the predominant areas a decade ago. Current research frontiers mainly concentrated on climate change and carbon sequestration for all ecosystems, while methane emission was a common frontier for mangroves and salt marshes. Ecosystem-specific research frontiers included mangrove encroachment for salt marshes, ocean acidification for seagrasses, and aboveground biomass estimation and restoration for mangroves. Future research should expand estimates of lateral carbon exchange and carbonate burial and strengthen the exploration of the impacts of climate change and restoration on blue carbon. Overall, this study provides the research status of carbon cycling in vegetated blue carbon ecosystems, which favors knowledge exchanges for future research.

Soil Carbon, Nitrogen, and Phosphorus Stoichiometry and Fractions in Blue Carbon Ecosystems: Implications for Carbon Accumulation in Allochthonous-Dominated Habitats

Blue carbon ecosystems (BCEs) including mangroves, saltmarshes, and seagrasses are highly efficient for organic carbon (OC) accumulation due to their unique ability to trap high rates of allochthonous substrates. It has been suggested that the magnitude of OC preservation is constrained by nitrogen (N) and phosphorus (P) limitation in response to climate and anthropogenic changes. However, little is known about the connection of soil OC with N-P and their forms in response to allochthonous inputs in BCEs. By analyzing soil OC, N, and P densities of BCEs from 797 sites globally, we find that, in China, where allochthonous OC provides 50-75% of total OC, soil C/P and N/P ratios are 4- to 8-fold lower than their global means, and 23%, 29%, and 20% of buried OC, N, and P are oxidation-resistant fractions that linked with minerals. We estimate that the OC stocks in China should double over the next 40 years under high allochthonous inputs and elevated N/P ratio scenarios during BCE restoration. Allochthonous-dominated BCEs thus have the capacity to enhance refractory and mineral bound organic matter accumulation. Protection and restoration of such BCEs will provide long-term mitigating benefits against sea level rise and greenhouse gas emissions.

A novel coupled framework for detecting hotspots of methane emission from the vulnerable Indian Sundarban mangrove ecosystem using data-driven models

Coastal mangroves have been lost to deforestation for anthropogenic activities such as agriculture over the past two decades. The genesis of methane (CH₄), a significant greenhouse gas (GHG) with a high potential for global warming, occurs through these mangrove beds. The mangrove forests in the Indian Sundarban deltaic region were studied for pre-monsoonal and post-monsoonal variations of CH₄ emission. Considering the importance of CH₄ emission, a process-based spatiotemporal (PBS) and an analytical neural network (ANN) model were proposed and used to estimate the amount of CH₄ emission from different land use land cover classes (LULC) of mangroves. The field work was performed in 2020, and gas samples of various LULC were directly collected from the mangrove bed using the enclosed box chamber method. Historical climatic data (1960-1989) were used to predict future climate scenarios and associated CH₄ emissions. The analysis and estimation activities were carried out utilizing satellite images from the pre-monsoonal and post-monsoonal seasons of the same year. The study revealed that pre-monsoonal CH₄ emission was higher in the south-west and northern parts of the deforested mangrove of the Indian Sundarban. A sensitivity study of the anticipated models was conducted using a variety of environmental input parameters and related main field observations. The measured precision area under curve of receiver operating characteristics was 0.753 for PBS and 0.718 for ANN models, respectively. The temperature factor (T_f) was the most crucial variable for CH₄ emissions. Based on the PBS model with coupled model intercomparison project-6 temperature data, a global circulation model was run to predict increasing CH₄ emissions up to 2100. The model revealed that the agricultural lands were the prime emitters of CH₄ in the Sundarban mangrove ecosystem.

Methane emissions offset atmospheric carbon dioxide uptake in coastal macroalgae, mixed vegetation and sediment ecosystems

Coastal ecosystems can efficiently remove carbon dioxide (CO₂) from the atmosphere and are thus promoted for nature-based climate change mitigation. Natural methane (CH₄) emissions from these ecosystems may counterbalance atmospheric CO₂ uptake. Still, knowledge of mechanisms sustaining such CH₄ emissions and their contribution to net radiative forcing remains scarce for globally prevalent macroalgae, mixed vegetation, and surrounding depositional sediment habitats. Here we show that these habitats emit CH₄ in the range of 0.1 - 2.9 mg CH₄ m^-2 d^-1 to the atmosphere, revealing in situ CH₄ emissions from macroalgae that were sustained by divergent methanogenic archaea in anoxic microsites. Over an annual cycle, CO₂-equivalent CH₄ emissions offset 28 and 35% of the carbon sink capacity attributed to atmospheric CO₂ uptake in the macroalgae and mixed vegetation habitats, respectively, and augment net CO₂ release of unvegetated sediments by 57%. Accounting for CH₄ alongside CO₂ sea-air fluxes and identifying the mechanisms controlling these emissions is crucial to constrain the potential of coastal ecosystems as net atmospheric carbon sinks and develop informed climate mitigation strategies.

Microbial active functional modules derived from network analysis and metabolic interactions decipher the complex microbiome assembly in mangrove sediments

BACKGROUND

The metabolic interactions of microbes significantly affect the assembly of microbial communities that play important roles in biogeochemical processes. However, most interspecies interactions between microorganisms in natural communities remain unknown, leading to a poor understanding of community assembly mechanisms.

RESULTS

Here, we used a genome-scale metabolic modeling-based approach to explore the potential interactions among bacteria and archaea in mangrove sediments. More than half of the assembled microbial species ([Formula: see text]) combined about 3000 pairwise metabolic interaction relationship with high potential. The examples of predicted interactions are consistent with the implications of studies based on microbial enrichment/culture, indicating the feasibility of our strategy for extracting diverse potential interactions from complex interspecies networks. Moreover, a substantial number of previously unknown microbial metabolic interactions were also predicted. We proposed a concept of microbial active functional module (mAFM), defined as a consortium constituted by a group of microbes possessing relatively high metabolic interactions via which they can actively realize certain dominant functions in element transformations. Based on the metabolic interactions and the transcript distribution of microorganisms, five mAFMs distributed in different layers of the sediments were identified. The whole group of mAFMs covered most of the principal pathways in the cycle of carbon, nitrogen, and sulfur, while each module possessed divergently dominant functions. According to thinctiis diston, we inferred that the mAFMs participated in the element cycles via their intra-cycle and the inter-exchange among them and the sediments.

CONCLUSIONS

The results of this study greatly expanded interaction potential of microbes in mangrove sediments, which could provide supports for prospective mutualistic system construction and microbial enrichment culture. Furthermore, the mAFMs can help to extract valuable microbial metabolic interactions from the whole community and to profile the functioning of the microbial community that promote biogeochemical cycling in mangrove sediments. Video Abstract.

Linking eutrophication to carbon dioxide and methane emissions from exposed mangrove soils along an urban gradient

Mangroves are one of the most important but threatened blue carbon ecosystems globally. Rapid urban growth has resulted in nutrient inputs and subsequent coastal eutrophication, associated with an enrichment in organic matter (OM) from algal and sewage sources and substantial changes in greenhouse gas (GHG) emissions. However, the effects of nitrogen (N) and phosphorus (P) enrichment on mangrove soil OM composition and GHG emissions, such as methane (CH₄) and carbon dioxide (CO₂), are still poorly understood. Here, we aim to evaluate the relationships between CO₂ and CH₄ efflux with OM composition in exposed soils from three mangrove areas along watersheds with different urbanization levels (Rio de Janeiro State, Brazil). To assess spatial (lower vs. upper intertidal zones) and seasonal (summer vs. winter) variability, we measured soil-air CO₂ and CH₄ fluxes at low spring tide, analyzing elementary (C, N, and P), isotopic (δ¹³C and δ¹⁵N), and the molecular (n-alkanes and sterols) composition of surface soil OM. A general trend of OM composition was found with increasing urban influence, with higher δ¹⁵N (proxy of anthropogenic N enrichment), less negative δ¹³C, more short-chain n-alkanes, lower C:N ratio (proxies of algal biomass), and higher epicoprostanol content (proxies of sewage-derived OM). The CO₂ efflux from exposed soils increased greatly in median (25/75 % interquartile range) from 4.6 (2.9/8.3) to 24.0 (21.5/32.7) mmol m^-2 h^-1 from more pristine to more urbanized watersheds, independent of intertidal zone and seasonality. The CO₂ fluxes at the most eutrophicated site were among the highest reported worldwide for mangrove soils. Conversely, CH₄ emissions were relatively low (three orders of magnitude lower than CO₂ fluxes), with high peaks in the lower intertidal zone during the rainy summer. Thus, our findings demonstrate the influence of coastal eutrophication on global warming potentials related to enhanced heterotrophic remineralization of blue carbon within mangrove soils.

Using Ocean Accounting towards an integrated assessment of ecosystem services and benefits within a coastal lake

Coasts lie at the interface between terrestrial and marine environments, where complex interrelationships and feedbacks between environmental, social and economic factors provide a challenge for decision-making. The knowledge and data needed to link and measure these multiple domains are often highly fragmented and incoherent. Ocean Accounting provides a means to organise relevant ocean data into a common framework, grounded in existing international statistical standards for national and environmental-economic accounting. Here, we test Ocean Accounting within Lake Illawarra, New South Wales (Australia), compiling accounts for the years between 2010 and 2020, inclusive, to measure the extent of coastal vegetation (mangrove, tidal marsh and seagrass) and associated ecosystem services flows (climate change mitigation, eutrophication mitigation) in physical and monetary terms and associated production and employment within sectors of the ocean economy. The accounts show an increase in mangroves by 2 ha and a decrease in seagrass of 80 ha. A net increase was observed in the amount of carbon, nitrogen and phosphorus sequestered across coastal vegetation, due to the expansion of mangroves. Alongside changes in ecosystem extent, a 2-fold increase in full-time ocean-related employment was observed. Fisheries catch also showed significant variation over the 10-year period, where dependencies were observed between commercial species with seagrass and tidal marsh. The relationships and measures derived from accounts provide a cohesive and integrated understanding to provide information for the management and standardised ecosystem service assessments.

The novel mangrove environment and composition of the Amazon Delta

Both freshwater floodplain (várzeas and igapós) forests and brackish-saline mangroves are abundant and well-described ecosystems in Brazil.¹ However, an interesting and unique wetland forest exists in the Amazon Delta where extensive mangroves occur in essentially freshwater tidal environments. Unlike the floodplain forests found upriver, the hydrology of these ecosystems is driven largely by large macro-tides of 4-8 m coupled with the significant freshwater discharge from the Amazon River. We explored these mangroves on the Amazon Delta (00°52' N to 01°41' N) and found surface water salinity to be consistently <5; soil pore water salinity in these mangrove forests ranged from 0 nearest the Amazon mouth to only 5-11 at the coastal margins to the north (01°41' N, 49°55' W). We also recorded a unique mix of mangrove-obligate (Avicennia sp., Rhizophora mangle) and facultative-wetland species (Mauritia flexuosa, Pterocarpus sp.) dominating these forests. This unique mix of plant species and soil porewater chemistry exists even along the coastal strands and active coastlines of the Atlantic Ocean. Part of these unique mangroves have escaped current global satellite mapping efforts, and we estimate that they may add over 180 km² (20% increase in mangrove area) within the Amazon Delta. Despite having a unique structure and function, these freshwater-brackish ecosystems likely provide similar ecosystem services to most mangroves worldwide, such as sequestering large quantities of organic carbon, protection of shoreline ecosystems from erosion, and habitats to many terrestrial and aquatic species (monkeys, birds, crabs, and fish).

High spatiotemporal variability of methane concentrations challenges estimates of emissions across vegetated coastal ecosystems

Coastal methane (CH₄ ) emissions dominate the global ocean CH₄ budget and can offset the "blue carbon" storage capacity of vegetated coastal ecosystems. However, current estimates lack systematic, high-resolution, and long-term data from these intrinsically heterogeneous environments, making coastal budgets sensitive to statistical assumptions and uncertainties. Using continuous CH₄ concentrations, δ¹³ C-CH₄  values, and CH₄  sea-air fluxes across four seasons in three globally pervasive coastal habitats, we show that the CH₄ distribution is spatially patchy over meter-scales and highly variable in time. Areas with mixed vegetation, macroalgae, and their surrounding sediments exhibited a spatiotemporal variability of surface water CH₄ concentrations ranging two orders of magnitude (i.e., 6-460 nM CH₄ ) with habitat-specific seasonal and diurnal patterns. We observed (1) δ¹³ C-CH₄  signatures that revealed habitat-specific CH₄ production and consumption pathways, (2) daily peak concentration events that could change >100% within hours across all habitats, and (3) a high thermal sensitivity of the CH₄ distribution signified by apparent activation energies of ~1 eV that drove seasonal changes. Bootstrapping simulations show that scaling the CH₄ distribution from few samples involves large errors, and that ~50 concentration samples per day are needed to resolve the scale and drivers of the natural variability and improve the certainty of flux calculations by up to 70%. Finally, we identify northern temperate coastal habitats with mixed vegetation and macroalgae as understudied but seasonally relevant atmospheric CH₄  sources (i.e., releasing ≥ 100 μmol CH₄  m^-2  day^-1 in summer). Due to the large spatial and temporal heterogeneity of coastal environments, high-resolution measurements will improve the reliability of CH₄ estimates and confine the habitat-specific contribution to regional and global CH₄ budgets.

Current Status and Potential Assessment of China's Ocean Carbon Sinks

The role of ocean carbon sinks in global climate change mitigation and carbon neutrality is still affected by lack of research. Aiming at overcoming the present limitations, a comprehensive and holistic framework and accounting method of ocean carbon sink evaluation are proposed in this study, which consider both carbon sink types and their characteristic carbon storage cycle timescales. The results show that (1) China's total ocean carbon sink is 69.83-106.46 Tg C/year, among which the mariculture, coastal wetlands, and offshore carbon sinks are 2.27-4.06, 2.86-5.85, and 64.70-96.55 Tg C/year, respectively; (2) ocean-based solutions such as coastal protection and restoration, mariculture development, ocean alkalization, ocean fertilization, and marine bioenergy with carbon capture and storage have substantial mitigation potential, but further investigation is required before large-scale deployment; (3) although China's ocean carbon sinks only counterbalanced 3.27-4.99% of its fossil fuel emissions, their tremendous enhancing potential and specific advantages cannot be ignored, and enhancing measures must be taken according to regional characteristics; (4) some uncertainties and limitations still exist, and problems such as double counting, carbon sink offset, and so forth need to be further considered. In a word, this study provides a basis for the development of ocean-based solutions on closing climate mitigation gaps.

Impact of plastic bags on the benthic system of a tropical estuary: An experimental study

Plastic bags are among the most discarded waste items as they are generally only used once and are often improperly eliminated and transported by rivers and estuaries to the ocean. We developed an experimental design to mimic the effect of plastic bag deposition in a tropical estuary and investigated its short-term impact on benthic community structure. We observed a significant influence of the presence of plastic bags on the abundance, richness and diversity of benthic fauna after an eight-week exposure period. Plastic bags acted as a barrier and interfered in processes that occur at the water-sediment interface, such as organic matter and silt-clay deposition. Our results indicate that plastic bags, in addition to directly affecting benthic fauna, may alter processes such as carbon burying, known as "blue carbon", thus making its storage in the sediment more difficult.

Microbial diversity and ecological interactions of microorganisms in the mangrove ecosystem: Threats, vulnerability, and adaptations

Mangroves are among the world's most productive ecosystems and a part of the "blue carbon" sink. They act as a connection between the terrestrial and marine ecosystems, providing habitat to countless organisms. Among these, microorganisms (e.g., bacteria, archaea, fungi, phytoplankton, and protozoa) play a crucial role in this ecosystem. Microbial cycling of major nutrients (carbon, nitrogen, phosphorus, and sulfur) helps maintain the high productivity of this ecosystem. However, mangrove ecosystems are being disturbed by the increasing concentration of greenhouse gases within the atmosphere. Both the anthropogenic and natural factors contribute to the upsurge of greenhouse gas concentration, resulting in global warming. Changing climate due to global warming and the increasing rate of human interferences such as pollution and deforestation are significant concerns for the mangrove ecosystem. Mangroves are susceptible to such environmental perturbations. Global warming, human interventions, and its consequences are destroying the ecosystem, and the dreadful impacts are experienced worldwide. Therefore, the conservation of mangrove ecosystems is necessary for protecting them from the changing environment-a step toward preserving the globe for better living. This review highlights the importance of mangroves and their microbial components on a global scale and the degree of vulnerability of the ecosystems toward anthropic and climate change factors. The future scenario of the mangrove ecosystem and the resilience of plants and microbes have also been discussed.

Blue carbon drawdown by restored mangrove forests improves with age

The restoration of blue carbon ecosystems, such as mangrove forests, is increasingly used as a management tool to mitigate climate change by removing and sequestering atmospheric carbon in the ground. However, estimates of carbon-offset potential are currently based on data from natural mangrove forests, potentially leading to overestimating the carbon-offset potential from restored mangroves. Here, in the first study of its kind, we utilise ²¹⁰Pb sediment age-dating techniques and greenhouse gas flux measures to estimate blue carbon additionality in restored mangrove forests, ranging from 13 to 35 years old. As expected, mangrove age had a significant effect on carbon additionality and carbon accretion rate, with the older mangrove stands (17 and 35 years old) holding double the total carbon stocks (aboveground + soil stocks; ∼115 tonnes C ha^-1) and double the soil sequestration rates (∼3 tonnes C ha^-1 yr^-1) than the youngest mangrove stand (13 years old). Although soil carbon stocks increased with mangrove age, the aboveground plant stocks were highest in the 17-year-old stand. Mangrove age also had a significant effect on soil carbon fluxes, with the older mangroves (≥17 years) releasing one-fourth of the CH₄ emissions, but double the CO₂ flux compared to young stands. Our study suggests that the carbon sink capacity of restored mangrove forests increases with age, but stabilises once they mature (e.g., >17 years). This means that by using carbon sequestration and emissions from natural forests, mangrove restoration projects may be overestimating their carbon sequestration potential.

Net CO2 and CH4 emissions from restored mangrove wetland: New insights based on a case study in estuary of the Pearl River, China

Mangroves have the potential to affect climate via C sequestration and methane (CH₄) emissions. With half of the world's mangroves lost during the 20th century, mangrove restoration in mitigating greenhouse gases has been increasingly recognized. However, the carbon exchanges during restored processes still remain large uncertain. In this study, we analyzed the temporal variations of CO₂ and CH₄ fluxes and their environmental controls during 2019 and 2020 based on a closed-path eddy covariance (EC) system in a 12-year restored subtropical mangrove wetland, in estuary of the Pearl River, southeastern China. We also estimated the CO₂ and CH₄ fluxes and their climate effect from the beginning of restoration by Random Forest algorithm (RF). The EC observations showed that annually the 12-year restored mangrove acted as CO₂ and CH₄ sources, with net CO₂ ecosystem exchange (NEE) of 82-175 gC·m^{- 2}·a^-1 and CH₄ fluxes of 24.7-26.3 gC·m^-2·a^-1. Low vegetation gross primary productivity (GPP) and high ecosystem respiration (Re) caused net CO₂ emissions in the mangroves. The estimation by RF indicated that the mangroves were always a CO₂ source after the beginning of restoration, but the annual NEE was linearly decreased from 233 to 131 gC·m^-2·a^-1 from 2008 to 2020. The annual CH₄ emissions continually increased from 19.0 to 25.8 gC·m^-2·a^-1 after restoration. As a result, the restored mangrove had a positive effect on climate warming, with increased GWP from 1276 to 1386 g CO₂-eq ·m^-2·a^-1 from 2008 to 2020. This is mainly due to lower GPP and higher Re by young restored mangroves, large water area as well as low salinity induced strong CH₄ emissions. Our results indicate new sights that young restored mangrove with large area of water surface may act as carbon sources. However, the long-term climate and ecosystem benefits due to mangrove restoration should not be ignored in future.

Climate-Friendly Seafood: The Potential for Emissions Reduction and Carbon Capture in Marine Aquaculture

Aquaculture is a critical food source for the world's growing population, producing 52% of the aquatic animal products consumed. Marine aquaculture (mariculture) generates 37.5% of this production and 97% of the world's seaweed harvest. Mariculture products may offer a climate-friendly, high-protein food source, because they often have lower greenhouse gas (GHG) emission footprints than do the equivalent products farmed on land. However, sustainable intensification of low-emissions mariculture is key to maintaining a low GHG footprint as production scales up to meet future demand. We examine the major GHG sources and carbon sinks associated with fed finfish, macroalgae and bivalve mariculture, and the factors influencing variability across sectors. We highlight knowledge gaps and provide recommendations for GHG emissions reductions and carbon storage, including accounting for interactions between mariculture operations and surrounding marine ecosystems. By linking the provision of maricultured products to GHG abatement opportunities, we can advance climate-friendly practices that generate sustainable environmental, social, and economic outcomes.

Metatranscriptomics reveals different features of methanogenic archaea among global vegetated coastal ecosystems

Vegetated coastal ecosystems (VCEs; i.e., mangroves, saltmarshes, and seagrasses) represent important sources of natural methane emission. Despite recent advances in the understanding of novel taxa and pathways associated with methanogenesis in these ecosystems, the key methanogenic players and the contribution of different substrates to methane formation remain elusive. Here, we systematically investigate the community and activity of methanogens using publicly available metatranscriptomes at a global scale together with our in-house metatranscriptomic dataset. Taxonomic profiling reveals that 13 groups of methanogenic archaea were transcribed in the investigated VCEs, and they were predominated by Methanosarcinales. Among these VCEs, methanogens exhibited all the three known methanogenic pathways in some mangrove sediments, where methylotrophic methanogens Methanosarcinales/Methanomassiliicoccales grew on diverse methyl compounds and coexisted with hydrogenotrophic (mainly Methanomicrobiales) and acetoclastic (mainly Methanothrix) methanogens. Contrastingly, the predominant methanogenic pathway in saltmarshes and seagrasses was constrained to methylotrophic methanogenesis. These findings reveal different archaeal methanogens in VCEs and suggest the potentially distinct methanogenesis contributions in these VCEs to the global warming.

Modelling blue carbon farming opportunities at different spatial scales

There is a growing interest in including blue carbon ecosystems (i.e., mangroves, tidal marshes and seagrasses) in climate mitigation programs in national and sub-national policies, with restoration and conservation of these ecosystems identified as potential activities to increase carbon accumulation through time. However, there is still a gap on the spatial scales needed to produce carbon offsets comparable with terrestrial or agricultural ecosystems. Here, we used the Coastal Blue Carbon InVEST 3.7.0 model to estimate future net carbon sequestration in blue carbon ecosystems along Australia's Great Barrier Reef (hereafter GBR) catchments, considering different management scenarios (i.e., reintroduction of tidal exchange through the removal of barriers, sea level rise, restoring low lying land) at three different spatial scales: whole GBR coastline, regional (14,000-16,300 ha), and local (335-370 ha) scales. The focus of the restoration (i.e., tidal marshes and/or mangroves) was dependent on data availability for each scenario. Furthermore, we also estimated the monetary value of carbon sequestration under each management scenario and spatial scale assessed in the study. We found that large scale restoration of tidal marshes could potentially sequester an additional ∼800,000 tonnes of CO₂e by 2045 (potentially generating AU$12 million based on the average Australia carbon price), with greater opportunities when sea level rise is accounted for in the modelling. Also, we found that regional and local projects would generate up to 23 tonnes CO₂e ha^-1 by the end of the crediting period. Our results can guide future decisions in the blue carbon market and financing schemes, however, the return on investment is dependent on the carbon price and funding scheme available for project implementation.

Characteristics of Microbial Community and Function With the Succession of Mangroves

In this study, 16S high-throughput and metagenomic sequencing analyses were employed to explore the changes in microbial community and function with the succession of mangroves (Sonneratia alba, Rhizophora apiculata, and Bruguiera parviflora) along the Merbok river estuary in Malaysia. The sediments of the three mangroves harbored their own unique dominant microbial taxa, whereas R. apiculata exhibited the highest microbial diversity. In general, Gammaproteobacteria, Actinobacteria, Alphaproteobacteria, Deltaproteobacteria, and Anaerolineae were the dominant microbial classes, but their abundances varied significantly among the three mangroves. Principal coordinates and redundancy analyses revealed that the specificity of the microbial community was highly correlated with mangrove populations and environmental factors. The results further showed that R. apiculata exhibited the highest carbon-related metabolism, coinciding with the highest organic carbon and microbial diversity. In addition, specific microbial taxa, such as Desulfobacterales and Rhizobiales, contributed the highest functional activities related to carbon metabolism, prokaryote carbon fixation, and methane metabolism. The present results provide a comprehensive understanding of the adaptations and functions of microbes in relation to environmental transition and mangrove succession in intertidal regions. High microbial diversity and carbon metabolism in R. apiculata might in turn facilitate and maintain the formation of climax mangroves in the middle region of the Merbok river estuary.

Source or sink? A study on the methane flux from mangroves stems in Zhangjiang estuary, southeast coast of China

Mangrove ecosystems are an important component of "blue carbon". However, it is not clear whether the stems play roles in the CH₄ budget of mangrove ecosystems. This study investigated the CH₄ emission from mangrove stems and its potential driving factors. We set up six sample plots in the Zhangjiang Estuary National Mangrove Nature Reserve, where Kandelia obovata, Avicennia marina and Aegiceras corniculata are the main mangrove tree species. Soil properties such as total carbon content, redox potential and salinity were determined in each plot. The dynamic chamber method was used to measure mangrove stems and soil CH₄ fluxes. Combined field survey results with Principal Component Analysis (PCA) of soil properties, we divided the six plots into two sites (S1 and S2) to perform statistical analyses of stem CH₄ fluxes. Then the CH₄ fluxes from mangrove tree stems and soil were further scaled up to the ecosystem level through the mapping model. Under different backgrounds of soil properties, salinity and microbial biomass carbon were the main factors modified soil CH₄ fluxes in the two sites, and further affected the stem CH₄ fluxes of mangroves. The soil of both sites are sources of CH₄, and the soil CH₄ emission of S2 was about twice higher than that of S1. Results of upscaling model showed that mangrove stems in S1 were CH₄ sinks with -105.65 g d^-1. But stems in S2 were CH₄ sources around 1448.24 g d^-1. Taken together, our results suggested that CH₄ emission from mangrove soils closely depends on soils properties. And mangrove stems were found to act as both CH₄ sources and CH₄ sinks depend on soil CH₄ production. Therefore, when calculating the CH₄ budget of the mangrove ecosystem, the contribution of mangrove plant stems cannot be ignored.

Ecosystem type drives tea litter decomposition and associated prokaryotic microbiome communities in freshwater and coastal wetlands at a continental scale

Wetland ecosystems are critical to the regulation of the global carbon cycle, and there is a high demand for data to improve carbon sequestration and emission models and predictions. Decomposition of plant litter is an important component of ecosystem carbon cycling, yet a lack of knowledge on decay rates in wetlands is an impediment to predicting carbon preservation. Here, we aim to fill this knowledge gap by quantifying the decomposition of standardised green and rooibos tea litter over one year within freshwater and coastal wetland soils across four climates in Australia. We also captured changes in the prokaryotic members of the tea-associated microbiome during this process. Ecosystem type drove differences in tea decay rates and prokaryotic microbiome community composition. Decomposition rates were up to 2-fold higher in mangrove and seagrass soils compared to freshwater wetlands and tidal marshes, in part due to greater leaching-related mass loss. For tidal marshes and freshwater wetlands, the warmer climates had 7-16% less mass remaining compared to temperate climates after a year of decomposition. The prokaryotic microbiome community composition was significantly different between substrate types and sampling times within and across ecosystem types. Microbial indicator analyses suggested putative metabolic pathways common across ecosystems were used to breakdown the tea litter, including increased presence of putative methylotrophs and sulphur oxidisers linked to the introduction of oxygen by root in-growth over the incubation period. Structural equation modelling analyses further highlighted the importance of incubation time on tea decomposition and prokaryotic microbiome community succession, particularly for rooibos tea that experienced a greater proportion of mass loss between three and twelve months compared to green tea. These results provide insights into ecosystem-level attributes that affect both the abiotic and biotic controls of belowground wetland carbon turnover at a continental scale, while also highlighting new decay dynamics for tea litter decomposing under longer incubations.

Tropical cyclones cumulatively control regional carbon fluxes in Everglades mangrove wetlands (Florida, USA)

Mangroves are the most blue-carbon rich coastal wetlands contributing to the reduction of atmospheric CO2 through photosynthesis (sequestration) and high soil organic carbon (C) storage. Globally, mangroves are increasingly impacted by human and natural disturbances under climate warming, including pervasive pulsing tropical cyclones. However, there is limited information assessing cyclone's functional role in regulating wetlands carbon cycling from annual to decadal scales. Here we show how cyclones with a wide range of integrated kinetic energy (IKE) impact C fluxes in the Everglades, a neotropical region with high cyclone landing frequency. Using long-term mangrove Net Primary Productivity (Litterfall, NPPL) data (2001-2018), we estimated cyclone-induced litterfall particulate organic C (litter-POC) export from mangroves to estuarine waters. Our analysis revealed that this lateral litter-POC flux (71-205 g C m-2 year-1)-currently unaccounted in global C budgets-is similar to C burial rates (69-157 g C m-2 year-1) and dissolved inorganic carbon (DIC, 61-229 g C m-2 year-1) export. We proposed a statistical model (PULITER) between IKE-based pulse index and NPPL to determine cyclone's impact on mangrove role as C sink or source. Including the cyclone's functional role in regulating mangrove C fluxes is critical to developing local and regional climate change mitigation plans.

Recent Carbon Storage and Burial Exceed Historic Rates in the San Juan Bay Estuary Peri-Urban Mangrove Forests (Puerto Rico, United States)

Mangroves sequester significant quantities of organic carbon (C) because of high rates of burial in the soil and storage in biomass. We estimated mangrove forest C storage and accumulation rates in aboveground and belowground components among five sites along an urbanization gradient in the San Juan Bay Estuary, Puerto Rico. Sites included the highly urbanized and clogged Caño Martin Peña in the western half of the estuary, a series of lagoons in the center of the estuary, and a tropical forest reserve (Piñones) in the easternmost part. Radiometrically dated cores were used to determine sediment accretion and soil C storage and burial rates. Measurements of tree dendrometers coupled with allometric equations were used to estimate aboveground biomass. Estuary-wide mangrove forest C storage and accumulation rates were estimated using interpolation methods and coastal vegetation cover data. In recent decades (1970-2016), the highly urbanized Martin Peña East (MPE) site with low flushing had the highest C storage and burial rates among sites. The MPE soil carbon burial rate was over twice as great as global estimates. Mangrove forest C burial rates in recent decades were significantly greater than historic decades (1930-1970) at Cañno Martin Peña and Piñones. Although MPE and Piñones had similarly low flushing, the landscape settings (clogged canal vs forest reserve) and urbanization (high vs low) were different. Apparently, not only urbanization, but site-specific flushing patterns, landscape setting, and soil fertility affected soil C storage and burial rates. There was no difference in C burial rates between historic and recent decades at the San José and La Torrecilla lagoons. Mangrove forests had soil C burial rates ranging from 88 g m-2 y-1 at the San José lagoon to 469 g m-2 y-1 at the MPE in recent decades. Watershed anthropogenic CO2 emissions (1.56 million Mg C y-1) far exceeded the annual mangrove forest C storage rates (aboveground biomass plus soils: 17,713 Mg C y-1). A combination of maintaining healthy mangrove forests and reducing anthropogenic emissions might be necessary to mitigate greenhouse gas emissions in urban, tropical areas.

Desulfobacterales stimulates nitrate reduction in the mangrove ecosystem of a subtropical gulf

The amount of nitrogen compounds discharged into the natural environment has increased drastically due to frequent human activities and led to worsening pollution. The mangrove ecosystem can remove nitrogen pollution, in this regard, few studies had focused on the relationship among nitrogen cycling genes, environmental factors, and taxonomic composition. In this study, shotgun metagenomic sequencing and quantitative polymerase chain reaction were used to understand the nitrogen cycle in the subtropical mangrove ecosystem in the Beibu Gulf of China. Eight nitrogen cycling pathways were annotated. Nitrogen metabolism activities were significantly higher in the wet season than those in the dry season. The most abundant genes were those related to the synthesis and degradation of organic nitrogen, followed by the genes involved in nitrate reduction (denitrification, dissimilation/assimilation nitrate reduction). Furthermore, dissimilation nitrate reduction was the main nitrate reduction pathway. Desulfobacterales plays an important role in nitrogen cycling and contributes 12% of the genes of nitrogen pathways on average; as such, a strong coupling relationship exists among nitrogen cycling, sulfur cycling, and carbon cycling in the mangrove ecosystem. Nitrogen pollution in the mangrove wetland can be efficiently alleviated by nitrate reduction of Desulfobacterales. Nevertheless, only 50% of genes can be matched among the known species, suggesting that many unknown microorganisms in the mangrove ecosystem can perform nitrogen cycling. Total phosphorus, available iron, and total organic carbon are the key environmental factors that influence the distribution of nitrogen cycling genes, related pathways, and the taxonomic composition. Our study clearly illustrates how the mangrove ecosystem mitigates nitrogen pollution through Desulfobacterales. This finding could provide a research reference for the whole nitrogen cycling in the mangrove ecosystem.

The impact of super-typhoon Mangkhut on sediment nutrient density and fluxes in a mangrove forest in Hong Kong

Cyclone disturbance results in mangrove foliage loss, tree mortality and other changes in ecosystem processes. However, the impact of cyclones on mangrove sediment nutrient density, sediment-air CO₂ and CH₄ fluxes and their isotopes remains largely unknown. Super-typhoon Mangkhut (maximum gust 256 km h^-1) hit Hong Kong in September 2018. We investigated the influence of the cyclone by comparing pre- and post-cyclone sediment carbon cycling processes as well as nitrogen density during an 8-month period in a mangrove forest at Ting Kok, Hong Kong. Time and/or nitrogen density are the dominant drivers of the variation of dark sediment-air CO₂ fluxes (R_d) and sediment nutrient density. Significant changes in R_d and their δ¹³CO₂ values, sediment organic carbon density (SOC) and nitrogen density (SON) occurred after the cyclone. R_d were highest one month after the cyclone (0.05 ± 0.01 mmol m^-2 min^-1) and lowest before the cyclone (8.32 ± 2.84 μmol m^-2 min^-1). δ¹³CO₂ of pre-cyclone R_d (-18.2 ± 1.7‰) was significantly higher than that of all post-cyclone fluxes (-22.9 ± 1.5‰ to -23.6 ± 1.8‰). Both SOC and SON were highest one month after the cyclone (23.05 ± 1.92 kg C m^-3, 2.42 ± 0.11 kg N m^-3, 20-40 cm). A significant positive relationship exists between R_d and SON. Sediment-air CH₄ fluxes did not show significant changes over time but along the sea-land gradient (0.28 ± 0.21 to 0.61 ± 0.22 μmol m^-2 min^-1). Cyclone disturbance results in the pulse input of litter, which may explain the significant increase in post-cyclone R_d and lower δ¹³CO₂ of R_d. With anticipated climate change-driven effects on cyclone occurrence and intensity, our data underscores the significance of incorporating the influence of cyclone disturbance in constraining the global nutrient budgets in mangroves.

Mangrove ecological services at the forefront of coastal change in the French overseas territories

Mangroves are located at the land-sea interface and are therefore confronted with human settlement in the coastal areas and associated pressures and uses. This unique habitat provides important ecosystem services to coastal communities worldwide, but the global decline of their surface area and their degradation over the past decades has put coastal communities even more at risk from the effects of climate change. This paper aims to present the first ecosystem services valuation of the mangroves of the French overseas Territories. We provide the economic value of mangroves for coastal protection, carbon sequestration, water purification and fish biomass production. We coupled a geospatial analysis of mangrove's distribution with the characterisation of land artificialisation behind mangroves. Then we developed a vulnerability index based on multiple indicators of exposure to environmental and anthropogenic stressors, mangroves' sensitivity to pressures, and mangroves' adaptive capacity to adjust their production functions accordingly. We estimated the monetary value of regulation and support services provided by mangroves in French overseas territories to be on average EUR 1.6 billion annually, 60% of which is carbon sequestration, 28% coastal protection, 7% water purification and 6% fish biomass production. When considering mangroves services without the vulnerability adjustment, the total value for those services would reach EUR 2 billion per year. Although much of the spatio-temporal variability in mangrove functioning could not be considered given the spatial scale of our study, these results demonstrate the value and socio-economic importance of mangroves to face and adapt from the effects of coastal change, at local and national scales, but also highlight the loss of services due to their vulnerability. This paper emphasises on the value of ecosystem services provided by mangroves to face coastal change so that a service-based approach to conservation would plead for increased national investment into their protection.

Sensitivity of the mangrove-estuarine microbial community to aquaculture effluent

Mangrove-dominated estuaries host a diverse microbial assemblage that facilitates nutrient and carbon conversions and could play a vital role in maintaining ecosystem health. In this study, we used 16S rRNA gene analysis, metabolic inference, nutrient concentrations, and δ¹³C and δ¹⁵N isotopes to evaluate the impact of land use change on near-shore biogeochemical cycles and microbial community structures within mangrove-dominated estuaries. Samples in close proximity to active shrimp aquaculture were high in NH₄⁺, NO₃⁻ NO₂⁻, and PO₄³⁻; lower in microbial community and metabolic diversity; and dominated by putative nitrifiers, denitrifies, and sulfur-oxidizing bacteria. Near intact mangrove forests we observed the presence of potential nitrogen fixers of the genus Calothrix and order Rhizobiales. We identified possible indicators of aquaculture effluents such as Pseudomonas balearica, Ponitmonas salivibrio, family Chromatiaceae, and genus Arcobacter. These results highlight the sensitivity of the estuarine-mangrove microbial community, and their ecosystem functions, to land use changes.

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In near-intact mangrove forests, we observed the presence of nitrogen fixers

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Calothrix could play a role in increasing nitrogen inventories via nitrogen fixation

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Disturbed sites were correlated with increased nitrogen and reduction in diversity

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Disturbed sites were dominated by nitrifiers, denitrifies, and sulfur-oxidizing bacteria

Introducing the Mangrove Microbiome Initiative: Identifying Microbial Research Priorities and Approaches To Better Understand, Protect, and Rehabilitate Mangrove Ecosystems

Mangrove ecosystems provide important ecological benefits and ecosystem services, including carbon storage and coastline stabilization, but they also suffer great anthropogenic pressures. Microorganisms associated with mangrove sediments and the rhizosphere play key roles in this ecosystem and make essential contributions to its productivity and carbon budget. Understanding this nexus and moving from descriptive studies of microbial taxonomy to hypothesis-driven field and lab studies will facilitate a mechanistic understanding of mangrove ecosystem interaction webs and open opportunities for microorganism-mediated approaches to mangrove protection and rehabilitation.

Mangrove ecosystems provide important ecological benefits and ecosystem services, including carbon storage and coastline stabilization, but they also suffer great anthropogenic pressures. Microorganisms associated with mangrove sediments and the rhizosphere play key roles in this ecosystem and make essential contributions to its productivity and carbon budget. Understanding this nexus and moving from descriptive studies of microbial taxonomy to hypothesis-driven field and lab studies will facilitate a mechanistic understanding of mangrove ecosystem interaction webs and open opportunities for microorganism-mediated approaches to mangrove protection and rehabilitation. Such an effort calls for a multidisciplinary and collaborative approach, involving chemists, ecologists, evolutionary biologists, microbiologists, oceanographers, plant scientists, conservation biologists, and stakeholders, and it requires standardized methods to support reproducible experiments. Here, we outline the Mangrove Microbiome Initiative, which is focused around three urgent priorities and three approaches for advancing mangrove microbiome research.

Plant species determine tidal wetland methane response to sea level rise

Blue carbon (C) ecosystems are among the most effective C sinks of the biosphere, but methane (CH₄) emissions can offset their climate cooling effect. Drivers of CH₄ emissions from blue C ecosystems and effects of global change are poorly understood. Here we test for the effects of sea level rise (SLR) and its interactions with elevated atmospheric CO₂, eutrophication, and plant community composition on CH₄ emissions from an estuarine tidal wetland. Changes in CH₄ emissions with SLR are primarily mediated by shifts in plant community composition and associated plant traits that determine both the direction and magnitude of SLR effects on CH₄ emissions. We furthermore show strong stimulation of CH₄ emissions by elevated atmospheric CO₂, whereas effects of eutrophication are not significant. Overall, our findings demonstrate a high sensitivity of CH₄ emissions to global change with important implications for modeling greenhouse-gas dynamics of blue C ecosystems.

Carbon Balance in Salt Marsh and Mangrove Ecosystems: A Global Synthesis

Mangroves and salt marshes are among the most productive ecosystems in the global coastal ocean. Mangroves store more carbon (739 Mg CORG ha−1) than salt marshes (334 Mg CORG ha−1), but the latter sequester proportionally more (24%) net primary production (NPP) than mangroves (12%). Mangroves exhibit greater rates of gross primary production (GPP), aboveground net primary production (AGNPP) and plant respiration (RC), with higher PGPP/RC ratios, but salt marshes exhibit greater rates of below-ground NPP (BGNPP). Mangroves have greater rates of subsurface DIC production and, unlike salt marshes, exhibit active microbial decomposition to a soil depth of 1 m. Salt marshes release more CH4 from soil and creek waters and export more dissolved CH4, but mangroves release more CO2 from tidal waters and export greater amounts of particulate organic carbon (POC), dissolved organic carbon (DOC) and dissolved inorganic carbon (DIC), to adjacent waters. Both ecosystems contribute only a small proportion of GPP, RE (ecosystem respiration) and NEP (net ecosystem production) to the global coastal ocean due to their small global area, but contribute 72% of air–sea CO2 exchange of the world’s wetlands and estuaries and contribute 34% of DIC export and 17% of DOC + POC export to the world’s coastal ocean. Thus, both wetland ecosystems contribute disproportionately to carbon flow of the global coastal ocean.

Methane emissions reduce the radiative cooling effect of a subtropical estuarine mangrove wetland by half

The role of coastal mangrove wetlands in sequestering atmospheric carbon dioxide (CO₂ ) and mitigating climate change has received increasing attention in recent years. While recent studies have shown that methane (CH₄ ) emissions can potentially offset the carbon burial rates in low-salinity coastal wetlands, there is hitherto a paucity of direct and year-round measurements of ecosystem-scale CH₄ flux (F_CH4 ) from mangrove ecosystems. In this study, we examined the temporal variations and biophysical drivers of ecosystem-scale F_CH4 in a subtropical estuarine mangrove wetland based on 3 years of eddy covariance measurements. Our results showed that daily mangrove F_CH4 reached a peak of over 0.1 g CH₄ -C m^-2  day^-1 during the summertime owing to a combination of high temperature and low salinity, while the wintertime F_CH4 was negligible. In this mangrove, the mean annual CH₄ emission was 11.7 ± 0.4 g CH₄ -C m^-2  year^-1 while the annual net ecosystem CO₂ exchange ranged between -891 and -690 g CO₂ -C m^-2  year^-1 , indicating a net cooling effect on climate over decadal to centurial timescales. Meanwhile, we showed that mangrove F_CH4 could offset the negative radiative forcing caused by CO₂ uptake by 52% and 24% over a time horizon of 20 and 100 years, respectively, based on the corresponding sustained-flux global warming potentials. Moreover, we found that 87% and 69% of the total variance of daily F_CH4 could be explained by the random forest machine learning algorithm and traditional linear regression model, respectively, with soil temperature and salinity being the most dominant controls. This study was the first of its kind to characterize ecosystem-scale F_CH4 in a mangrove wetland with long-term eddy covariance measurements. Our findings implied that future environmental changes such as climate warming and increasing river discharge might increase CH₄ emissions and hence reduce the net radiative cooling effect of estuarine mangrove forests.

Global Significance of Mangrove Blue Carbon in Climate Change Mitigation

Mangrove forests store and sequester large area-specific quantities of blue carbon (Corg). Except for tundra and peatlands, mangroves store more Corg per unit area than any other ecosystem. Mean mangrove Corg stock is 738.9 Mg Corg ha−1 and mean global stock is 6.17 Pg Corg, which equates to only 0.4–7% of terrestrial ecosystem Corg stocks but 17% of total tropical marine Corg stocks. Per unit area, mangroves sequester 179.6 g Corg m−2a−1 and globally about 15 Tg Corg a−1. Mangroves sequester only 4% (range 1.3–8%) of Corg sequestered by terrestrial ecosystems, indicating that mangroves are a minor contributor to global C storage and sequestration. CO2 emissions from mangrove losses equate to 0.036 Pg CO2-equivalents a−1 based on rates of C sequestration but 0.088 Pg CO2-equivalents a−1 based on complete destruction for conversion to aquaculture and agriculture. Mangrove CO2 emissions account for only 0.2% of total global CO2 emissions but 18% of CO2 emissions from the tropical coastal ocean. Despite significant data limitations, the role of mangrove ecosystems in climate change mitigation is small at the global scale but more significant in the tropical coastal ocean and effective at the national and regional scale, especially in areas with high rates of deforestation and destruction.