1
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Ray A, Loghinov I, Ravindranath V, Barth AL. Early hippocampal hyperexcitability and synaptic reorganization in mouse models of amyloidosis. iScience 2024; 27:110629. [PMID: 39262788 PMCID: PMC11388185 DOI: 10.1016/j.isci.2024.110629] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 05/09/2024] [Accepted: 07/29/2024] [Indexed: 09/13/2024] Open
Abstract
The limited success of plaque-reducing therapies in Alzheimer's disease suggests that early treatment might be more effective in delaying or reversing memory impairments. Toward this end, it is important to establish the progression of synaptic and circuit changes before onset of plaques or cognitive deficits. Here, we used quantitative, fluorescence-based methods for synapse detection in CA1 pyramidal neurons to investigate the interaction between abnormal circuit activity, measured by Fos-immunoreactivity, and synapse reorganization in mouse models of amyloidosis. Using a genetically encoded, fluorescently labeled synaptic marker in juvenile mice (prior to sexual maturity), we find both synapse gain and loss depending on dendritic location. This progresses to broad synapse loss in aged mice. Elevated hippocampal activity in both CA3 and CA1 was present at weaning and preceded this reorganization. Thus, Aβ overproduction may initiate abnormal activity and subsequent input-specific synapse plasticity. These findings indicate that sustained amyloidosis drives heterogeneous and progressive circuit-wide abnormalities.
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Affiliation(s)
- Ajit Ray
- Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA
| | - Iulia Loghinov
- Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA
| | - Vijayalakshmi Ravindranath
- Centre for Neuroscience, Indian Institute of Science, Bengaluru, Karnataka 560012, India
- Centre for Brain Research, Indian Institute of Science, Bengaluru, Karnataka 560012, India
| | - Alison L Barth
- Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA
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2
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Yang C, Mammen L, Kim B, Li M, Robson DN, Li JM. A population code for spatial representation in the zebrafish telencephalon. Nature 2024:10.1038/s41586-024-07867-2. [PMID: 39198641 DOI: 10.1038/s41586-024-07867-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Accepted: 07/23/2024] [Indexed: 09/01/2024]
Abstract
Spatial learning in teleost fish requires an intact telencephalon1, a brain region that contains putative analogues to components of the mammalian limbic system (for example, hippocampus)2-4. However, cells fundamental to spatial cognition in mammals-for example, place cells (PCs)5,6-have yet to be established in any fish species. In this study, using tracking microscopy to record brain-wide calcium activity in freely swimming larval zebrafish7, we compute the spatial information content8 of each neuron across the brain. Strikingly, in every recorded animal, cells with the highest spatial specificity were enriched in the zebrafish telencephalon. These PCs form a population code of space from which we can decode the animal's spatial location across time. By continuous recording of population-level activity, we found that the activity manifold of PCs refines and untangles over time. Through systematic manipulation of allothetic and idiothetic cues, we demonstrate that zebrafish PCs integrate multiple sources of information and can flexibly remap to form distinct spatial maps. Using analysis of neighbourhood distance between PCs across environments, we found evidence for a weakly preconfigured network in the telencephalon. The discovery of zebrafish PCs represents a step forward in our understanding of spatial cognition across species and the functional role of the early vertebrate telencephalon.
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Affiliation(s)
- Chuyu Yang
- Max Planck Institute for Biological Cybernetics, Tuebingen, Germany
- University of Tuebingen, Tuebingen, Germany
| | - Lorenz Mammen
- Max Planck Institute for Biological Cybernetics, Tuebingen, Germany
- University of Tuebingen, Tuebingen, Germany
- Department of Neurobiology and Behavior, Cornell University, Ithaca, NY, USA
| | - Byoungsoo Kim
- Max Planck Institute for Biological Cybernetics, Tuebingen, Germany
- University of Tuebingen, Tuebingen, Germany
| | - Meng Li
- Max Planck Institute for Biological Cybernetics, Tuebingen, Germany
- Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai, China
- INSIDE Institute for Biological and Artificial Intelligence, Shanghai, China
| | - Drew N Robson
- Max Planck Institute for Biological Cybernetics, Tuebingen, Germany.
| | - Jennifer M Li
- Max Planck Institute for Biological Cybernetics, Tuebingen, Germany.
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3
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Keith RE, Wild GA, Keith MJ, Chen D, Pack S, Dumas TC. Individual NMDA receptor GluN2 subunit signaling domains differentially regulate the postnatal maturation of hippocampal excitatory synaptic transmission and plasticity but not dendritic morphology. Synapse 2024; 78:e22292. [PMID: 38813758 PMCID: PMC11141731 DOI: 10.1002/syn.22292] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 04/16/2024] [Accepted: 04/30/2024] [Indexed: 05/31/2024]
Abstract
N-methyl-d-aspartate receptors (NMDARs) at hippocampal excitatory synapses undergo a late postnatal shift in subunit composition, from an initial prevalence of GluN2B subunit incorporation to a later predominance of GluN2A. This GluN2B to GluN2A shift alters NMDAR calcium conductance dynamics and intracellular molecular signaling that are individually regulated by distinct GluN2 signaling domains and temporally align with developmental alterations in dendritic and synaptic plasticity. However, the impacts of individual GluN2B to GluN2A signaling domains on neuronal development remain unknown. Ionotropic and intracellular signaling domains of GluN2 subunits were separated by creating chimeric GluN2 subunits that were expressed in two transgenic mouse lines. Western blot and immunoprecipitation revealed that roughly one third of native synaptic NMDARs were replaced by transformed NMDARs without altering total synaptic NMDAR content. Schaffer collateral synaptic strength was transiently increased in acutely prepared hippocampal slices at just over 3 weeks of age in animals overexpressing the GluN2B carboxy terminus. Long-term potentiation (LTP) induction following lower frequency stimulation was regulated by GluN2 ionotropic signaling domains in an age-dependent manner and LTP maintenance was enhanced by overexpression of the GluN2B CTD in mature animals. After higher frequency stimulation, the induction and maintenance of LTP were increased in young adult animals overexpressing the GluN2B ionotropic signaling domains but reduced in juveniles just over 3 weeks of age. Confocal imaging of green fluorescent protein (GFP)- labeled CA1 pyramidal neurons revealed no alterations in dendritic morphology or spine density in mice expressing chimeric GluN2 subunits. These results illustrate how individual GluN2 subunit signaling domains do or do not control physiological and morphological development of hippocampal excitatory neurons and better clarify the neurobiological factors that govern hippocampal maturation. SIGNIFICANCE STATEMENT: A developmental reduction in the magnitude of hippocampal long-term synaptic potentiation (LTP) and a concomitant improvement in spatial maze performance coincide with greater incorporation of GluN2A subunits into synaptic NMDARs. Corroborating our prior discovery that overexpression of GluN2A-type ionotropic signaling domains enables context-based navigation in immature mice, GluN2A-type ionotropic signaling domain overexpression reduces LTP induction threshold and magnitude in immature mice. Also, we previously found that GluN2B carboxy terminal domain (CTD) overexpression enhances long-term spatial memory in mature mice and now report that the GluN2B CTD is associated with greater amplitude of LTP after induction in mature mice. Thus, the late postnatal maturation of context encoding likely relies on a shift toward GluN2A-type ionotropic signaling and a reduction in the threshold to induce LTP while memory consolidation and LTP maintenance are regulated by GluN2B subunit CTD signaling.
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Affiliation(s)
- Rachel E. Keith
- Interdisciplinary Program in Neuroscience, College of Science; George Mason University, Fairfax, VA 22030
| | - Grace A. Wild
- Psychology Department, College of Humanities and Social Sciences; George Mason University, Fairfax, VA 22030
| | - Matthew J. Keith
- Interdisciplinary Program in Neuroscience, College of Science; George Mason University, Fairfax, VA 22030
| | - Diyi Chen
- Interdisciplinary Program in Neuroscience, College of Science; George Mason University, Fairfax, VA 22030
| | | | - Theodore C. Dumas
- Interdisciplinary Program in Neuroscience, College of Science; George Mason University, Fairfax, VA 22030
- Psychology Department, College of Humanities and Social Sciences; George Mason University, Fairfax, VA 22030
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4
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Yang Y, Sakimoto Y, Mitsushima D. Postnatal Development of Synaptic Plasticity at Hippocampal CA1 Synapses: Correlation of Learning Performance with Pathway-Specific Plasticity. Brain Sci 2024; 14:382. [PMID: 38672030 PMCID: PMC11048295 DOI: 10.3390/brainsci14040382] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2024] [Revised: 04/05/2024] [Accepted: 04/11/2024] [Indexed: 04/28/2024] Open
Abstract
To determine the critical timing for learning and the associated synaptic plasticity, we analyzed developmental changes in learning together with training-induced plasticity. Rats were subjected to an inhibitory avoidance (IA) task prior to weaning. While IA training did not alter latency at postnatal day (PN) 16, there was a significant increase in latency from PN 17, indicating a critical day for IA learning between PN 16 and 17. One hour after training, acute hippocampal slices were prepared for whole-cell patch clamp analysis following the retrieval test. In the presence of tetrodotoxin (0.5 µM), miniature excitatory postsynaptic currents (mEPSCs) and inhibitory postsynaptic currents (mIPSCs) were sequentially recorded from the same CA1 neuron. Although no changes in the amplitude of mEPSCs or mIPSCs were observed at PN 16 and 21, significant increases in both excitatory and inhibitory currents were observed at PN 23, suggesting a specific critical day for training-induced plasticity between PN 21 and 23. Training also increased the diversity of postsynaptic currents at PN 23 but not at PN 16 and 21, demonstrating a critical day for training-induced increase in the information entropy of CA1 neurons. Finally, we analyzed the plasticity at entorhinal cortex layer III (ECIII)-CA1 or CA3-CA1 synapses for each individual rat. At either ECIII-CA1 or CA3-CA1 synapses, a significant correlation between mean α-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid/N-methyl-D-aspartic acid (AMPA/NMDA) ratio and learning outcomes emerged at PN 23 at both synapses, demonstrating a critical timing for the direct link between AMPA receptor-mediated synaptic plasticity and learning efficacy. Here, we identified multiple critical periods with respect to training-induced synaptic plasticity and delineated developmental trajectories of learning mechanisms at hippocampal CA1 synapses.
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Affiliation(s)
- Yuheng Yang
- Department of Physiology, Yamaguchi University Graduate School of Medicine, Yamaguchi 755-8505, Japan; (Y.Y.); (Y.S.)
| | - Yuya Sakimoto
- Department of Physiology, Yamaguchi University Graduate School of Medicine, Yamaguchi 755-8505, Japan; (Y.Y.); (Y.S.)
| | - Dai Mitsushima
- Department of Physiology, Yamaguchi University Graduate School of Medicine, Yamaguchi 755-8505, Japan; (Y.Y.); (Y.S.)
- The Research Institute for Time Studies, Yamaguchi University, Yamaguchi 753-8511, Japan
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5
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Bevandić J, Chareyron LJ, Bachevalier J, Cacucci F, Genzel L, Newcombe NS, Vargha-Khadem F, Ólafsdóttir HF. Episodic memory development: Bridging animal and human research. Neuron 2024; 112:1060-1080. [PMID: 38359826 PMCID: PMC11129319 DOI: 10.1016/j.neuron.2024.01.020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2023] [Revised: 12/22/2023] [Accepted: 01/19/2024] [Indexed: 02/17/2024]
Abstract
Human episodic memory is not functionally evident until about 2 years of age and continues to develop into the school years. Behavioral studies have elucidated this developmental timeline and its constituent processes. In tandem, lesion and neurophysiological studies in non-human primates and rodents have identified key neural substrates and circuit mechanisms that may underlie episodic memory development. Despite this progress, collaborative efforts between psychologists and neuroscientists remain limited, hindering progress. Here, we seek to bridge human and non-human episodic memory development research by offering a comparative review of studies using humans, non-human primates, and rodents. We highlight critical theoretical and methodological issues that limit cross-fertilization and propose a common research framework, adaptable to different species, that may facilitate cross-species research endeavors.
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Affiliation(s)
- Juraj Bevandić
- Donders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, the Netherlands
| | - Loïc J Chareyron
- Cognitive Neuroscience and Neuropsychiatry, Developmental Neurosciences, University College London Great Ormond Street Institute of Child Health, London, UK; Laboratory of Brain and Cognitive Development, Institute of Psychology, University of Lausanne, Lausanne, Switzerland
| | - Jocelyne Bachevalier
- Division of Developmental and Cognitive Neuroscience, Emory National Primate Research Center, Department of Psychology, Emory University, Atlanta, GA, USA.
| | - Francesca Cacucci
- Department of Neuroscience, Physiology and Pharmacology, University College London, London, UK.
| | - Lisa Genzel
- Donders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, the Netherlands.
| | - Nora S Newcombe
- Department of Psychology, Temple University, Philadelphia, PA, USA.
| | - Faraneh Vargha-Khadem
- Cognitive Neuroscience and Neuropsychiatry, Developmental Neurosciences, University College London Great Ormond Street Institute of Child Health, London, UK.
| | - H Freyja Ólafsdóttir
- Donders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, the Netherlands.
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6
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Mill NR, Ogoe RH, Valibeigi N, Chen D, Kimbal CL, Yoon SJ, Ganju S, Perdomo JA, Sardana A, McHail DG, Gonzalez DA, Dumas TC. Positive modulation of α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors differentially alters spatial learning and memory in juvenile rats younger and older than three weeks. Behav Pharmacol 2024; 35:79-91. [PMID: 38451022 PMCID: PMC10921984 DOI: 10.1097/fbp.0000000000000764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/08/2024]
Abstract
Remarkable performance improvements occur at the end of the third postnatal week in rodents tested in various tasks that require navigation according to spatial context. While alterations in hippocampal function at least partially subserve this cognitive advancement, physiological explanations remain incomplete. Previously, we discovered that developmental modifications to hippocampal glutamatergic α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptors in juvenile rats was related to more mature spontaneous alternation behavior in a symmetrical Y-maze. Moreover, a positive allosteric modulator of AMPA receptors enabled immature rats to alternate at rates seen in older animals, suggesting an excitatory synaptic limitation to hippocampal maturation. We then validated the Barnes maze for juvenile rats in order to test the effects of positive AMPA receptor modulation on a goal-directed spatial memory task. Here we report the effects of the AMPA receptor modulator, CX614, on spatial learning and memory in the Barnes maze. Similar to our prior report, animals just over 3 weeks of age display substantial improvements in learning and memory performance parameters compared to animals just under 3 weeks of age. A moderate dose of CX614 enabled immature animals to move more directly to the goal location, but only after 1 day of training. This performance improvement was observed on the second day of training with drug delivery or during a memory probe trial performed without drug delivery after the second day of training. Higher doses created more search errors, especially in more mature animals. Overall, CX614 provided modest performance benefits for immature rats in a goal-directed spatial memory task.
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Affiliation(s)
| | | | | | - Diyi Chen
- Interdisciplinary Program in Neuroscience
| | | | | | | | | | - Anjali Sardana
- James Madison High School, George Mason University, Fairfax, Virginia, USA
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7
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Jeffery KJ. The mosaic structure of the mammalian cognitive map. Learn Behav 2024; 52:19-34. [PMID: 38231426 PMCID: PMC10923978 DOI: 10.3758/s13420-023-00618-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/27/2023] [Indexed: 01/18/2024]
Abstract
The cognitive map, proposed by Tolman in the 1940s, is a hypothetical internal representation of space constructed by the brain to enable an animal to undertake flexible spatial behaviors such as navigation. The subsequent discovery of place cells in the hippocampus of rats suggested that such a map-like representation does exist, and also provided a tool with which to explore its properties. Single-neuron studies in rodents conducted in small singular spaces have suggested that the map is founded on a metric framework, preserving distances and directions in an abstract representational format. An open question is whether this metric structure pertains over extended, often complexly structured real-world space. The data reviewed here suggest that this is not the case. The emerging picture is that instead of being a single, unified construct, the map is a mosaic of fragments that are heterogeneous, variably metric, multiply scaled, and sometimes laid on top of each other. Important organizing factors within and between fragments include boundaries, context, compass direction, and gravity. The map functions not to provide a comprehensive and precise rendering of the environment but rather to support adaptive behavior, tailored to the species and situation.
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Affiliation(s)
- Kate J Jeffery
- School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, UK.
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8
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Ishihara Y, Fujimoto K, Murai H, Ishikawa J, Mitsushima D. Classification of Hippocampal Ripples: Convolutional Neural Network Learns Episode-Specific Changes. Brain Sci 2024; 14:177. [PMID: 38391751 PMCID: PMC10886971 DOI: 10.3390/brainsci14020177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Revised: 02/07/2024] [Accepted: 02/09/2024] [Indexed: 02/24/2024] Open
Abstract
The hippocampus is known to play an important role in memory by processing spatiotemporal information of episodic experiences. By recording synchronized multiple-unit firing events (ripple firings with 300 Hz-10 kHz) of hippocampal CA1 neurons in freely moving rats, we previously found an episode-dependent diversity in the waveform of ripple firings. In the present study, we hypothesized that changes in the diversity would depend on the type of episode experienced. If this hypothesis holds, we can identify the ripple waveforms associated with each episode. Thus, we first attempted to classify the ripple firings measured from rats into five categories: those experiencing any of the four episodes and those before experiencing any of the four episodes. In this paper, we construct a convolutional neural network (CNN) to classify the current stocks of ripple firings into these five categories and demonstrate that the CNN can successfully classify the ripple firings. We subsequently indicate partial ripple waveforms that the CNN focuses on for classification by applying gradient-weighted class activation mapping (Grad-CAM) to the CNN. The method of t-distributed stochastic neighbor embedding (t-SNE) maps ripple waveforms into a two-dimensional feature space. Analyzing the distribution of partial waveforms extracted by Grad-CAM in a t-SNE feature space suggests that the partial waveforms may be representative of each category.
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Affiliation(s)
- Yuta Ishihara
- Graduate School of Science for Creative Emergence, Kagawa University, Kagawa 761-0396, Japan
| | - Ken'ichi Fujimoto
- Faculty of Engineering and Design, Kagawa University, Kagawa 761-0396, Japan
| | - Hiroshi Murai
- Faculty of Global and Science Studies, Yamaguchi University, Yamaguchi 753-8541, Japan
| | - Junko Ishikawa
- Graduate School of Medicine, Yamaguchi University, Yamaguchi 755-8505, Japan
| | - Dai Mitsushima
- Graduate School of Medicine, Yamaguchi University, Yamaguchi 755-8505, Japan
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9
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Reinshagen A. Grid cells: the missing link in understanding Parkinson's disease? Front Neurosci 2024; 18:1276714. [PMID: 38389787 PMCID: PMC10881698 DOI: 10.3389/fnins.2024.1276714] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2023] [Accepted: 01/24/2024] [Indexed: 02/24/2024] Open
Abstract
The mechanisms underlying Parkinson's disease (PD) are complex and not fully understood, and the box-and-arrow model among other current models present significant challenges. This paper explores the potential role of the allocentric brain and especially its grid cells in several PD motor symptoms, including bradykinesia, kinesia paradoxa, freezing of gait, the bottleneck phenomenon, and their dependency on cueing. It is argued that central hubs, like the locus coeruleus and the pedunculopontine nucleus, often narrowly interpreted in the context of PD, play an equally important role in governing the allocentric brain as the basal ganglia. Consequently, the motor and secondary motor (e.g., spatially related) symptoms of PD linked with dopamine depletion may be more closely tied to erroneous computation by grid cells than to the basal ganglia alone. Because grid cells and their associated central hubs introduce both spatial and temporal information to the brain influencing velocity perception they may cause bradykinesia or hyperkinesia as well. In summary, PD motor symptoms may primarily be an allocentric disturbance resulting from virtual faulty computation by grid cells revealed by dopamine depletion in PD.
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10
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Muessig L, Ribeiro Rodrigues F, Bjerknes TL, Towse BW, Barry C, Burgess N, Moser EI, Moser MB, Cacucci F, Wills TJ. Environment geometry alters subiculum boundary vector cell receptive fields in adulthood and early development. Nat Commun 2024; 15:982. [PMID: 38302455 PMCID: PMC10834499 DOI: 10.1038/s41467-024-45098-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Accepted: 01/15/2024] [Indexed: 02/03/2024] Open
Abstract
Boundaries to movement form a specific class of landmark information used for navigation: Boundary Vector Cells (BVCs) are neurons which encode an animal's location as a vector displacement from boundaries. Here we characterise the prevalence and spatial tuning of subiculum BVCs in adult and developing male rats, and investigate the relationship between BVC spatial firing and boundary geometry. BVC directional tunings align with environment walls in squares, but are uniformly distributed in circles, demonstrating that environmental geometry alters BVC receptive fields. Inserted barriers uncover both excitatory and inhibitory components to BVC receptive fields, demonstrating that inhibitory inputs contribute to BVC field formation. During post-natal development, subiculum BVCs mature slowly, contrasting with the earlier maturation of boundary-responsive cells in upstream Entorhinal Cortex. However, Subiculum and Entorhinal BVC receptive fields are altered by boundary geometry as early as tested, suggesting this is an inherent feature of the hippocampal representation of space.
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Affiliation(s)
- Laurenz Muessig
- Department of Cell and Developmental Biology, University College London, London, WC1E 6BT, UK
| | | | - Tale L Bjerknes
- Kavli Institute for Systems Neuroscience, Norwegian University of Science and Technology, Trondheim, 7491, Norway
| | - Benjamin W Towse
- Institute of Cognitive Neuroscience, University College London, London, WC1N 3AZ, UK
| | - Caswell Barry
- Department of Cell and Developmental Biology, University College London, London, WC1E 6BT, UK
| | - Neil Burgess
- Institute of Cognitive Neuroscience, University College London, London, WC1N 3AZ, UK
- UCL Queen Square Institute of Neurology, University College London, London, WC1N 3BG, UK
| | - Edvard I Moser
- Kavli Institute for Systems Neuroscience, Norwegian University of Science and Technology, Trondheim, 7491, Norway
| | - May-Britt Moser
- Kavli Institute for Systems Neuroscience, Norwegian University of Science and Technology, Trondheim, 7491, Norway
| | - Francesca Cacucci
- Department of Neuroscience, Physiology and Pharmacology; University College London, London, WC1E 6BT, UK
| | - Thomas J Wills
- Department of Cell and Developmental Biology, University College London, London, WC1E 6BT, UK.
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11
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Ohki T, Kunii N, Chao ZC. Efficient, continual, and generalized learning in the brain - neural mechanism of Mental Schema 2.0. Rev Neurosci 2023; 34:839-868. [PMID: 36960579 DOI: 10.1515/revneuro-2022-0137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Accepted: 02/26/2023] [Indexed: 03/25/2023]
Abstract
There has been tremendous progress in artificial neural networks (ANNs) over the past decade; however, the gap between ANNs and the biological brain as a learning device remains large. With the goal of closing this gap, this paper reviews learning mechanisms in the brain by focusing on three important issues in ANN research: efficiency, continuity, and generalization. We first discuss the method by which the brain utilizes a variety of self-organizing mechanisms to maximize learning efficiency, with a focus on the role of spontaneous activity of the brain in shaping synaptic connections to facilitate spatiotemporal learning and numerical processing. Then, we examined the neuronal mechanisms that enable lifelong continual learning, with a focus on memory replay during sleep and its implementation in brain-inspired ANNs. Finally, we explored the method by which the brain generalizes learned knowledge in new situations, particularly from the mathematical generalization perspective of topology. Besides a systematic comparison in learning mechanisms between the brain and ANNs, we propose "Mental Schema 2.0," a new computational property underlying the brain's unique learning ability that can be implemented in ANNs.
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Affiliation(s)
- Takefumi Ohki
- International Research Center for Neurointelligence (WPI-IRCN), The University of Tokyo Institutes for Advanced Study, The University of Tokyo, Tokyo 113-0033, Japan
| | - Naoto Kunii
- Department of Neurosurgery, The University of Tokyo, Tokyo 113-0033, Japan
| | - Zenas C Chao
- International Research Center for Neurointelligence (WPI-IRCN), The University of Tokyo Institutes for Advanced Study, The University of Tokyo, Tokyo 113-0033, Japan
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12
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Gönner L, Baeuchl C, Glöckner F, Riedel P, Smolka MN, Li SC. Levodopa suppresses grid-like activity and impairs spatial learning in novel environments in healthy young adults. Cereb Cortex 2023; 33:11247-11256. [PMID: 37782941 PMCID: PMC10690865 DOI: 10.1093/cercor/bhad361] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Revised: 08/31/2023] [Accepted: 09/01/2023] [Indexed: 10/04/2023] Open
Abstract
Accumulated evidence from animal studies suggests a role for the neuromodulator dopamine in memory processes, particularly under conditions of novelty or reward. Our understanding of how dopaminergic modulation impacts spatial representations and spatial memory in humans remains limited. Recent evidence suggests age-specific regulation effects of dopamine pharmacology on activity in the medial temporal lobe, a key region for spatial memory. To which degree this modulation affects spatially patterned medial temporal representations remains unclear. We reanalyzed recent data from a pharmacological dopamine challenge during functional brain imaging combined with a virtual object-location memory paradigm to assess the effect of Levodopa, a dopamine precursor, on grid-like activity in the entorhinal cortex. We found that Levodopa impaired grid cell-like representations in a sample of young adults (n = 55, age = 26-35 years) in a novel environment, accompanied by reduced spatial memory performance. We observed no such impairment when Levodopa was delivered to participants who had prior experience with the task. These results are consistent with a role of dopamine in modulating the encoding of novel spatial experiences. Our results suggest that dopamine signaling may play a larger role in shaping ongoing spatial representations than previously thought.
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Affiliation(s)
- Lorenz Gönner
- Faculty of Psychology, Chair of Lifespan Developmental Neuroscience, TU Dresden, 01062 Dresden, Germany
- Department of Psychiatry, TU Dresden, 01307 Dresden, Germany
| | - Christian Baeuchl
- Faculty of Psychology, Chair of Lifespan Developmental Neuroscience, TU Dresden, 01062 Dresden, Germany
- Department of Psychiatry, TU Dresden, 01307 Dresden, Germany
| | - Franka Glöckner
- Faculty of Psychology, Chair of Lifespan Developmental Neuroscience, TU Dresden, 01062 Dresden, Germany
| | - Philipp Riedel
- Department of Psychiatry, TU Dresden, 01307 Dresden, Germany
| | | | - Shu-Chen Li
- Faculty of Psychology, Chair of Lifespan Developmental Neuroscience, TU Dresden, 01062 Dresden, Germany
- Centre for Tactile Internet With Human-in-the-Loop, TU Dresden, 01062 Dresden, Germany
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13
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Schøyen V, Pettersen MB, Holzhausen K, Fyhn M, Malthe-Sørenssen A, Lepperød ME. Coherently remapping toroidal cells but not Grid cells are responsible for path integration in virtual agents. iScience 2023; 26:108102. [PMID: 37867941 PMCID: PMC10589895 DOI: 10.1016/j.isci.2023.108102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Revised: 08/25/2023] [Accepted: 09/27/2023] [Indexed: 10/24/2023] Open
Abstract
It is widely believed that grid cells provide cues for path integration, with place cells encoding an animal's location and environmental identity. When entering a new environment, these cells remap concurrently, sparking debates about their causal relationship. Using a continuous attractor recurrent neural network, we study spatial cell dynamics in multiple environments. We investigate grid cell remapping as a function of global remapping in place-like units through random resampling of place cell centers. Dimensionality reduction techniques reveal that a subset of cells manifest a persistent torus across environments. Unexpectedly, these toroidal cells resemble band-like cells rather than high grid score units. Subsequent pruning studies reveal that toroidal cells are crucial for path integration while grid cells are not. As we extend the model to operate across many environments, we delineate its generalization boundaries, revealing challenges with modeling many environments in current models.
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Affiliation(s)
- Vemund Schøyen
- Department of Biosciences, University of Oslo, Oslo 0313, Norway
| | | | | | - Marianne Fyhn
- Department of Biosciences, University of Oslo, Oslo 0313, Norway
- Simula Research Laboratory, Norway
| | - Anders Malthe-Sørenssen
- Department of Physics, University of Oslo, Oslo 0313, Norway
- Simula Research Laboratory, Norway
| | - Mikkel Elle Lepperød
- Department of Physics, University of Oslo, Oslo 0313, Norway
- Department of Biosciences, University of Oslo, Oslo 0313, Norway
- Simula Research Laboratory, Norway
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14
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Levy ERJ, Carrillo-Segura S, Park EH, Redman WT, Hurtado JR, Chung S, Fenton AA. A manifold neural population code for space in hippocampal coactivity dynamics independent of place fields. Cell Rep 2023; 42:113142. [PMID: 37742193 PMCID: PMC10842170 DOI: 10.1016/j.celrep.2023.113142] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Revised: 06/14/2023] [Accepted: 08/30/2023] [Indexed: 09/26/2023] Open
Abstract
Hippocampus place cell discharge is temporally unreliable across seconds and days, and place fields are multimodal, suggesting an "ensemble cofiring" spatial coding hypothesis with manifold dynamics that does not require reliable spatial tuning, in contrast to hypotheses based on place field (spatial tuning) stability. We imaged mouse CA1 (cornu ammonis 1) ensembles in two environments across three weeks to evaluate these coding hypotheses. While place fields "remap," being more distinct between than within environments, coactivity relationships generally change less. Decoding location and environment from 1-s ensemble location-specific activity is effective and improves with experience. Decoding environment from cell-pair coactivity relationships is also effective and improves with experience, even after removing place tuning. Discriminating environments from 1-s ensemble coactivity relies crucially on the cells with the most anti-coactive cell-pair relationships because activity is internally organized on a low-dimensional manifold of non-linear coactivity relationships that intermittently reregisters to environments according to the anti-cofiring subpopulation activity.
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Affiliation(s)
| | - Simón Carrillo-Segura
- Center for Neural Science, New York University, New York, NY 10003, USA; Graduate Program in Mechanical and Aerospace Engineering, Tandon School of Engineering, New York University, Brooklyn, NY 11201, USA
| | - Eun Hye Park
- Center for Neural Science, New York University, New York, NY 10003, USA
| | - William Thomas Redman
- Interdepartmental Graduate Program in Dynamical Neuroscience, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
| | | | - SueYeon Chung
- Center for Neural Science, New York University, New York, NY 10003, USA; Flatiron Institute Center for Computational Neuroscience, New York, NY 10010, USA
| | - André Antonio Fenton
- Center for Neural Science, New York University, New York, NY 10003, USA; Neuroscience Institute at the NYU Langone Medical Center, New York, NY 10016, USA.
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15
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Ulsaker-Janke I, Waaga T, Waaga T, Moser EI, Moser MB. Grid cells in rats deprived of geometric experience during development. Proc Natl Acad Sci U S A 2023; 120:e2310820120. [PMID: 37782787 PMCID: PMC10576132 DOI: 10.1073/pnas.2310820120] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Accepted: 08/18/2023] [Indexed: 10/04/2023] Open
Abstract
The medial entorhinal cortex (MEC) is part of the brain's network for dynamic representation of location. The most abundant class of neurons in this circuit is the grid cell, characterized by its periodic, hexagonally patterned firing fields. While in developing animals some MEC cell types express adult-like firing patterns already on the first exposure to an open spatial environment, only days after eye opening, grid cells mature more slowly, over a 1-to-2-wk period after the animals leave their nest. Whether the later emergence of a periodic grid pattern reflects a need for experience with spatial environments has not been determined. We here show that grid-like firing patterns continue to appear during exploration of open square environments in rats that are raised for the first months of their life in opaque spherical environments, in the absence of stable reference boundaries to guide spatial orientation. While strictly periodic firing fields were initially absent in these animals, clear grid patterns developed after only a few trials of training. In rats that were tested in the same open environment but raised for the first months of life in opaque cubes, with sharp vertical boundaries, grid-like firing was from the beginning indistinguishable from that of nondeprived control animals growing up in large enriched cages. Thus, although a minimum of experience with peripheral geometric boundaries is required for expression of regular grid patterns in a new environment, the effect of restricted spatial experience is overcome with short training, consistent with a preconfigured experience-independent basis for the grid pattern.
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Affiliation(s)
- Ingvild Ulsaker-Janke
- Kavli Institute for Systems Neuroscience and Centre for Algorithms in the Cortex, Norwegian University of Science and Technology, 7491Trondheim, Norway
| | - Torgeir Waaga
- Kavli Institute for Systems Neuroscience and Centre for Algorithms in the Cortex, Norwegian University of Science and Technology, 7491Trondheim, Norway
| | - Tanja Waaga
- Kavli Institute for Systems Neuroscience and Centre for Algorithms in the Cortex, Norwegian University of Science and Technology, 7491Trondheim, Norway
| | - Edvard I. Moser
- Kavli Institute for Systems Neuroscience and Centre for Algorithms in the Cortex, Norwegian University of Science and Technology, 7491Trondheim, Norway
| | - May-Britt Moser
- Kavli Institute for Systems Neuroscience and Centre for Algorithms in the Cortex, Norwegian University of Science and Technology, 7491Trondheim, Norway
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16
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Trinh AT, Girardi-Schappo M, Béïque JC, Longtin A, Maler L. Adaptive spike threshold dynamics associated with sparse spiking of hilar mossy cells are captured by a simple model. J Physiol 2023; 601:4397-4422. [PMID: 37676904 DOI: 10.1113/jp283728] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 08/17/2023] [Indexed: 09/09/2023] Open
Abstract
Hilar mossy cells (hMCs) in the dentate gyrus (DG) receive inputs from DG granule cells (GCs), CA3 pyramidal cells and inhibitory interneurons, and provide feedback input to GCs. Behavioural and in vivo recording experiments implicate hMCs in pattern separation, navigation and spatial learning. Our experiments link hMC intrinsic excitability to their synaptically evoked in vivo spiking outputs. We performed electrophysiological recordings from DG neurons and found that hMCs displayed an adaptative spike threshold that increased both in proportion to the intensity of injected currents, and in response to spiking itself, returning to baseline over a long time scale, thereby instantaneously limiting their firing rate responses. The hMC activity is additionally limited by a prominent medium after-hyperpolarizing potential (AHP) generated by small conductance K+ channels. We hypothesize that these intrinsic hMC properties are responsible for their low in vivo firing rates. Our findings extend previous studies that compare hMCs, CA3 pyramidal cells and hilar inhibitory cells and provide novel quantitative data that contrast the intrinsic properties of these cell types. We developed a phenomenological exponential integrate-and-fire model that closely reproduces the hMC adaptive threshold nonlinearities with respect to their threshold dependence on input current intensity, evoked spike latency and long-lasting spike-induced increase in spike threshold. Our robust and computationally efficient model is amenable to incorporation into large network models of the DG that will deepen our understanding of the neural bases of pattern separation, spatial navigation and learning. KEY POINTS: Previous studies have shown that hilar mossy cells (hMCs) are implicated in pattern separation and the formation of spatial memory, but how their intrinsic properties relate to their in vivo spiking patterns is still unknown. Here we show that the hMCs display electrophysiological properties that distinguish them from the other hilar cell types including a highly adaptive spike threshold that decays slowly. The spike-dependent increase in threshold combined with an after-hyperpolarizing potential mediated by a slow K+ conductance is hypothesized to be responsible for the low-firing rate of the hMC observed in vivo. The hMC's features are well captured by a modified stochastic exponential integrate-and-fire model that has the unique feature of a threshold intrinsically dependant on both the stimulus intensity and the spiking history. This computational model will allow future work to study how the hMCs can contribute to spatial memory formation and navigation.
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Affiliation(s)
- Anh-Tuan Trinh
- Kavli Institute for Systems Neuroscience, Norwegian University of Science and Technology, Trondheim, Trøndelag, Norway
- Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
| | - Mauricio Girardi-Schappo
- Departamento de Física, Universidade Federal de Santa Catarina, Santa Catarina, Florianópolis, Brazil
- Department of Physics, University of Ottawa, Ottawa, Ontario, Canada
| | - Jean-Claude Béïque
- Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Brain and Mind Institute, University of Ottawa, Ottawa, Ontario, Canada
- Center for Neural Dynamics, University of Ottawa, Ottawa, Ontario, Canada
| | - André Longtin
- Department of Physics, University of Ottawa, Ottawa, Ontario, Canada
- Brain and Mind Institute, University of Ottawa, Ottawa, Ontario, Canada
- Center for Neural Dynamics, University of Ottawa, Ottawa, Ontario, Canada
| | - Leonard Maler
- Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Brain and Mind Institute, University of Ottawa, Ottawa, Ontario, Canada
- Center for Neural Dynamics, University of Ottawa, Ottawa, Ontario, Canada
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17
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Parra-Barrero E, Vijayabaskaran S, Seabrook E, Wiskott L, Cheng S. A map of spatial navigation for neuroscience. Neurosci Biobehav Rev 2023; 152:105200. [PMID: 37178943 DOI: 10.1016/j.neubiorev.2023.105200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2023] [Revised: 04/13/2023] [Accepted: 04/24/2023] [Indexed: 05/15/2023]
Abstract
Spatial navigation has received much attention from neuroscientists, leading to the identification of key brain areas and the discovery of numerous spatially selective cells. Despite this progress, our understanding of how the pieces fit together to drive behavior is generally lacking. We argue that this is partly caused by insufficient communication between behavioral and neuroscientific researchers. This has led the latter to under-appreciate the relevance and complexity of spatial behavior, and to focus too narrowly on characterizing neural representations of space-disconnected from the computations these representations are meant to enable. We therefore propose a taxonomy of navigation processes in mammals that can serve as a common framework for structuring and facilitating interdisciplinary research in the field. Using the taxonomy as a guide, we review behavioral and neural studies of spatial navigation. In doing so, we validate the taxonomy and showcase its usefulness in identifying potential issues with common experimental approaches, designing experiments that adequately target particular behaviors, correctly interpreting neural activity, and pointing to new avenues of research.
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Affiliation(s)
- Eloy Parra-Barrero
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany; International Graduate School of Neuroscience, Ruhr University Bochum, Bochum, Germany
| | - Sandhiya Vijayabaskaran
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany
| | - Eddie Seabrook
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany
| | - Laurenz Wiskott
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany; International Graduate School of Neuroscience, Ruhr University Bochum, Bochum, Germany
| | - Sen Cheng
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany; International Graduate School of Neuroscience, Ruhr University Bochum, Bochum, Germany.
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18
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Pompeiano M, Colonnese MT. cFOS as a biomarker of activity maturation in the hippocampal formation. Front Neurosci 2023; 17:929461. [PMID: 37521697 PMCID: PMC10374841 DOI: 10.3389/fnins.2023.929461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Accepted: 06/23/2023] [Indexed: 08/01/2023] Open
Abstract
We explored the potential for cFOS expression as a marker of functional development of "resting-state" waking activity in the extended network of the hippocampus and entorhinal cortex. We examined sleeping and awake mice at (P)ostnatal days 5, 9, 13, and 17 as well as in adulthood. We find that cFOS expression is state-dependent even at 5 days old, with reliable staining occurring only in the awake mice. Even during waking, cFOS expression was rare and weak at P5. The septal nuclei, entorhinal cortex layer (L)2, and anterodorsal thalamus were exceptional in that they had robust cFOS expression at P5 that was similar to or greater than in adulthood. Significant P5 expression was also observed in the dentate gyrus, entorhinal cortex L6, postsubiculum L4-6, ventral subiculum, supramammillary nucleus, and posterior hypothalamic nucleus. The expression in these regions grew stronger with age, and the expression in new regions was added progressively at P9 and P13 by which point the overall expression pattern in many regions was qualitatively similar to the adult. Six regions-CA1, dorsal subiculum, postsubiculum L2-3, reuniens nucleus, and perirhinal and postrhinal cortices-were very late developing, mostly achieving adult levels only after P17. Our findings support a number of developmental principles. First, early spontaneous activity patterns induced by muscle twitches during sleep do not induce robust cFOS expression in the extended hippocampal network. Second, the development of cFOS expression follows the progressive activation along the trisynaptic circuit, rather than birth date or cellular maturation. Third, we reveal components of the egocentric head-direction and theta-rhythm circuits as the earliest cFOS active circuits in the forebrain. Our results suggest that cFOS staining may provide a reliable and sensitive biomarker for hippocampal formation activity development, particularly in regard to the attainment of a normal waking state and synchronizing rhythms such as theta and gamma.
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Affiliation(s)
- Maria Pompeiano
- Department of Pharmacology and Physiology, The George Washington University, Washington, DC, United States
- Departamento de Bioingeniería, Universidad Carlos III de Madrid, Madrid, Spain
| | - Matthew T. Colonnese
- Department of Pharmacology and Physiology, The George Washington University, Washington, DC, United States
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19
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Donato F, Xu Schwartzlose A, Viana Mendes RA. How Do You Build a Cognitive Map? The Development of Circuits and Computations for the Representation of Space in the Brain. Annu Rev Neurosci 2023; 46:281-299. [PMID: 37428607 DOI: 10.1146/annurev-neuro-090922-010618] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/12/2023]
Abstract
In mammals, the activity of neurons in the entorhinal-hippocampal network is modulated by the animal's position and its movement through space. At multiple stages of this distributed circuit, distinct populations of neurons can represent a rich repertoire of navigation-related variables like the animal's location, the speed and direction of its movements, or the presence of borders and objects. Working together, spatially tuned neurons give rise to an internal representation of space, a cognitive map that supports an animal's ability to navigate the world and to encode and consolidate memories from experience. The mechanisms by which, during development, the brain acquires the ability to create an internal representation of space are just beginning to be elucidated. In this review, we examine recent work that has begun to investigate the ontogeny of circuitry, firing patterns, and computations underpinning the representation of space in the mammalian brain.
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Affiliation(s)
- Flavio Donato
- Biozentrum, University of Basel, Basel, Switzerland;
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20
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Pendry RJ, Quigley LD, Volk LJ, Pfeiffer BE. A Lightweight Drive Implant for Chronic Tetrode Recordings in Juvenile Mice. J Vis Exp 2023. [PMID: 37335110 PMCID: PMC10903788 DOI: 10.3791/65228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/21/2023] Open
Abstract
In vivo electrophysiology provides unparalleled insight into the sub-second-level circuit dynamics of the intact brain and represents a method of particular importance for studying mouse models of human neuropsychiatric disorders. However, such methods often require large cranial implants, which cannot be used in mice at early developmental time points. As such, virtually no studies of in vivo physiology have been performed in freely behaving infant or juvenile mice, despite the fact that a better understanding of neurological development in this critical window would likely provide unique insights into age-dependent developmental disorders such as autism or schizophrenia. Here, a micro-drive design, surgical implantation procedure, and post-surgery recovery strategy are described that allow for chronic field and single-unit recordings from multiple brain regions simultaneously in mice as they age from postnatal day 20 (p20) to postnatal day 60 (p60) and beyond, a time window roughly corresponding to the human ages of 2 years old through to adulthood. The number of recording electrodes and final recording sites can be easily modified and expanded, thus allowing flexible experimental control of the in vivo monitoring of behavior- or disease-relevant brain regions across development.
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Affiliation(s)
- Robert J Pendry
- Department of Neuroscience, UT Southwestern Medical Center; Neuroscience Graduate Program, UT Southwestern Medical Center
| | - Lilyana D Quigley
- Department of Neuroscience, UT Southwestern Medical Center; Neuroscience Graduate Program, UT Southwestern Medical Center
| | - Lenora J Volk
- Department of Neuroscience, UT Southwestern Medical Center; O'Donnell Brain Institute, UT Southwestern Medical Center; Department of Psychiatry, UT Southwestern Medical Center
| | - Brad E Pfeiffer
- Department of Neuroscience, UT Southwestern Medical Center; O'Donnell Brain Institute, UT Southwestern Medical Center;
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21
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Geiller T, Priestley JB, Losonczy A. A local circuit-basis for spatial navigation and memory processes in hippocampal area CA1. Curr Opin Neurobiol 2023; 79:102701. [PMID: 36878147 PMCID: PMC10020891 DOI: 10.1016/j.conb.2023.102701] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Revised: 02/02/2023] [Accepted: 02/06/2023] [Indexed: 03/06/2023]
Abstract
The hippocampus is a multi-stage neural circuit that is critical for memory formation. Its distinct anatomy has long inspired theories that rely on local interactions between neurons within each subregion in order to perform serial operations important for memory encoding and storage. These local computations have received less attention in CA1 area, the primary output node of the hippocampus, where excitatory neurons are thought to be only very sparsely interconnected. However, recent findings have demonstrated the power of local circuitry in CA1, with evidence for strong functional interactions among excitatory neurons, regulation by diverse inhibitory microcircuits, and novel plasticity rules that can profoundly reshape the hippocampal ensemble code. Here we review how these properties expand the dynamical repertoire of CA1 beyond the confines of feedforward processing, and what implications they have for hippocampo-cortical functions in memory formation.
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Affiliation(s)
- Tristan Geiller
- Department of Neuroscience, Columbia University, New York, NY, 10027, USA; Mortimer B Zuckerman Mind Brain Behavior Institute, New York, NY, 10027, USA. https://twitter.com/tgeiller
| | - James B Priestley
- Department of Neuroscience, Columbia University, New York, NY, 10027, USA; Mortimer B Zuckerman Mind Brain Behavior Institute, New York, NY, 10027, USA; Center for Theoretical Neuroscience, Columbia University, New York, NY, 10027, USA. https://twitter.com/jamespriestley4
| | - Attila Losonczy
- Department of Neuroscience, Columbia University, New York, NY, 10027, USA; Mortimer B Zuckerman Mind Brain Behavior Institute, New York, NY, 10027, USA; Kavli Institute for Brain Science, Columbia University, New York, NY, 10027, USA.
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22
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Guelton B. “Mental maps”: Between memorial transcription and symbolic projection. Front Psychol 2023; 14:1142238. [PMID: 37057159 PMCID: PMC10086158 DOI: 10.3389/fpsyg.2023.1142238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2023] [Accepted: 02/27/2023] [Indexed: 03/30/2023] Open
Abstract
“The mental map” is a concept that has been used and defined in numerous ways. The cognitive map, and the concept map–also known as the “heuristic” or “mind” map–are the two distinct contextual meanings covered by the term mental map in the present article. In the mental map domain, the first major field of study is geography, spatial cognition, and neurophysiology and it aims to understand how the route taken by a subject (or a set of subjects) in space leads to memorization and internal representation(s). In general, the externalization of these representations takes the form of drawings, positioning in a graph, or oral/textual narratives, but it is primarily reflected as a behavior in space that can be recorded as tracking items. A second field of study, one which is geared more toward exploratory and combinatorial uses, is the concept (also heuristic or mind) map which consists in organizing notions, concepts, and information in the form of tree graphs or graphs that can be used to produce diagrams and flowcharts. The aim is projective, for clarification and discovery purposes or for data organization and visualization. To date, very few studies in the literature have examined the similar, overlapping and oppositional features in what is broadly referred to as “representation(s) of space” and “space(s) of representation.” How can we better apprehend the complex notion of “mental map?” The question of memorial transcription? Of “symbolic projection?” Can we identify meeting points between these two polarities and, if possible, a continuum? Through the notion of cognitive graph, recent advances in the understanding of brain mechanisms enable us to approach the distinctions between cognitive map and conceptual map as an articulated and continuous whole.
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23
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Mei J, Meshkinnejad R, Mohsenzadeh Y. Effects of neuromodulation-inspired mechanisms on the performance of deep neural networks in a spatial learning task. iScience 2023; 26:106026. [PMID: 36818295 PMCID: PMC9929609 DOI: 10.1016/j.isci.2023.106026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Revised: 11/18/2022] [Accepted: 01/19/2023] [Indexed: 01/25/2023] Open
Abstract
In recent years, the biological underpinnings of adaptive learning have been modeled, leading to faster model convergence and various behavioral benefits in tasks including spatial navigation and cue-reward association. Furthermore, studies have investigated how the neuromodulatory system, a major driver of synaptic plasticity and state-dependent changes in the brain neuronal activities, plays a role in training deep neural networks (DNNs). In this study, we extended previous studies on neuromodulation-inspired DNNs and explored the effects of neuromodulatory components on learning and single unit activities in a spatial learning task. Under the multiscale neuromodulatory framework, plastic components, dropout probability modulation, and learning rate decay were added to the single unit, layer, and whole network levels of DNN models, respectively. We observed behavioral benefits including faster learning and smaller error of ambulation. We then concluded that neuromodulatory components can affect learning trajectories, outcomes, and single unit activities, in a component- and hyperparameter-dependent manner.
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Affiliation(s)
- Jie Mei
- Western Institute for Neuroscience, University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Computer Science, University of Western Ontario, London, ON N6A 5B7, Canada
| | - Rouzbeh Meshkinnejad
- Department of Computer Science, University of Western Ontario, London, ON N6A 5B7, Canada
- Vector Institute for Artificial Intelligence, Toronto, ON M5G 1M1, Canada
| | - Yalda Mohsenzadeh
- Western Institute for Neuroscience, University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Computer Science, University of Western Ontario, London, ON N6A 5B7, Canada
- Vector Institute for Artificial Intelligence, Toronto, ON M5G 1M1, Canada
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24
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Morris G, Derdikman D. The chicken and egg problem of grid cells and place cells. Trends Cogn Sci 2023; 27:125-138. [PMID: 36437188 DOI: 10.1016/j.tics.2022.11.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Revised: 11/02/2022] [Accepted: 11/02/2022] [Indexed: 11/26/2022]
Abstract
Place cells and grid cells are major building blocks of the hippocampal cognitive map. The prominent forward model postulates that grid-cell modules are generated by a continuous attractor network; that a velocity signal evoked during locomotion moves entorhinal activity bumps; and that place-cell activity constitutes summation of entorhinal grid-cell modules. Experimental data support the first postulate, but not the latter two. Several families of solutions that depart from these postulates have been put forward. We suggest a modified model (spatial modulation continuous attractor network; SCAN), whereby place cells are generated from spatially selective nongrid cells. Locomotion causes these cells to move the hippocampal activity bump, leading to movement of the entorhinal manifolds. Such inversion accords with the shift of hippocampal thought from navigation to more abstract functions.
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Affiliation(s)
- Genela Morris
- Department of Neuroscience, Rappaport Faculty of Medicine and Research Institute, Technion - Israel Institute of Technology, Haifa, Israel; Tel Aviv Sourasky Medical Center, Tel Aviv, Israel.
| | - Dori Derdikman
- Department of Neuroscience, Rappaport Faculty of Medicine and Research Institute, Technion - Israel Institute of Technology, Haifa, Israel.
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25
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Lai SK, Wu KLK, Ma CW, Ng KP, Hu XQ, Tam KW, Yung WH, Wang YT, Wong TP, Shum DKY, Chan YS. Timely insertion of AMPA receptor in developing vestibular circuits is required for manifestation of righting reflexes and effective navigation. Prog Neurobiol 2023; 221:102402. [PMID: 36608782 DOI: 10.1016/j.pneurobio.2023.102402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Revised: 12/23/2022] [Accepted: 01/02/2023] [Indexed: 01/05/2023]
Abstract
Vestibular information processed first by the brainstem vestibular nucleus (VN), and further by cerebellum and thalamus, underlies diverse brain function. These include the righting reflexes and spatial cognitive behaviour. While the cerebellar and thalamic circuits that decode vestibular information are known, the importance of VN neurons and the temporal requirements for their maturation that allow developmental consolidation of the aforementioned circuits remains unclear. We show that timely unsilencing of glutamatergic circuits in the VN by NMDA receptor-mediated insertion of AMPAR receptor type 1 (GluA1) subunits is critical for maturation of VN and successful consolidation of higher circuits that process vestibular information. Delayed unsilencing of NMDA receptor-only synapses of neonatal VN neurons permanently decreased their functional connectivity with inferior olive circuits. This was accompanied by delayed pruning of the inferior olive inputs to Purkinje cells and permanent reduction in their plasticity. These derangements led to deficits in associated vestibular righting reflexes and motor co-ordination during voluntary movement. Vestibular-dependent recruitment of thalamic neurons was similarly reduced, resulting in permanently decreased efficiency of spatial navigation. The findings thus show that well-choreographed maturation of the nascent vestibular circuitry is prerequisite for functional integration of vestibular signals into ascending pathways for diverse vestibular-related behaviours.
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Affiliation(s)
- Suk-King Lai
- School of Biomedical Sciences, The University of Hong Kong, Hong Kong, PR China
| | - Kenneth Lap Kei Wu
- School of Biomedical Sciences, The University of Hong Kong, Hong Kong, PR China
| | - Chun-Wai Ma
- School of Biomedical Sciences, The University of Hong Kong, Hong Kong, PR China
| | - Ka-Pak Ng
- School of Biomedical Sciences, The University of Hong Kong, Hong Kong, PR China
| | - Xiao-Qian Hu
- School of Biomedical Sciences, The University of Hong Kong, Hong Kong, PR China
| | - Kin-Wai Tam
- School of Biomedical Sciences, The University of Hong Kong, Hong Kong, PR China
| | - Wing-Ho Yung
- School of Biomedical Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong, PR China
| | - Yu Tian Wang
- Department of Medicine and Brain Research Centre, Vancouver Coastal Health Research Institute and University of British Columbia, Vancouver, BC, Canada
| | - Tak Pan Wong
- Douglas Mental Health University Institute, Montreal, Quebec, Canada; Department of Psychiatry McGill University, Montreal, Quebec, Canada.
| | - Daisy Kwok-Yan Shum
- School of Biomedical Sciences, The University of Hong Kong, Hong Kong, PR China; State Key Laboratory of Brain and Cognitive Sciences, The University of Hong Kong, Hong Kong, PR China.
| | - Ying-Shing Chan
- School of Biomedical Sciences, The University of Hong Kong, Hong Kong, PR China; State Key Laboratory of Brain and Cognitive Sciences, The University of Hong Kong, Hong Kong, PR China.
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Pendry RJ, Quigley LD, Volk LJ, Pfeiffer BE. A novel, lightweight drive implant for chronic tetrode recordings in juvenile mice. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.01.04.522760. [PMID: 36711560 PMCID: PMC9881909 DOI: 10.1101/2023.01.04.522760] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
SHORT ABSTRACT We describe a novel micro-drive design, surgical implantation procedure, and post-surgery recovery strategy that allows for chronic field and single-unit recordings from up to sixteen brain regions simultaneously in juvenile and adolescent mice across a critical developmental window from p20 to p60 and beyond. LONG ABSTRACT In vivo electrophysiology provides unparalleled insight into sub-second-level circuit dynamics of the intact brain and represents a method of particular importance for studying mouse models of human neuro-psychiatric disorders. However, such methods often require large cranial implants which cannot be used in mice at early developmental timepoints. As such, virtually no studies of in vivo physiology have been performed in freely behaving infant or juvenile mice, despite the fact that a better understanding of neurological development in this critical window is likely to provide unique insights into age-dependent developmental disorders such as autism or schizophrenia. Here, we describe a novel micro-drive design, surgical implantation procedure, and post-surgery recovery strategy that allows for chronic field and single-unit recordings from up to sixteen brain regions simultaneously in mice as they age from postnatal day 20 (p20) to postnatal day 60 (p60) and beyond, a time window roughly corresponding to human ages 2-years-old through adult. The number of recording electrodes and final recording sites can be easily modified and expanded, allowing flexible experimental control of in vivo monitoring of behavior- or disease-relevant brain regions across development.
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Affiliation(s)
- Robert J Pendry
- Department of Neuroscience, UT Southwestern Medical Center, Dallas, TX,Neuroscience Graduate Program, UT Southwestern Medical Center, Dallas, TX
| | - Lilyana D Quigley
- Department of Neuroscience, UT Southwestern Medical Center, Dallas, TX,Neuroscience Graduate Program, UT Southwestern Medical Center, Dallas, TX
| | - Lenora J Volk
- Department of Neuroscience, UT Southwestern Medical Center, Dallas, TX,O’Donnell Brain Institute, UT Southwestern Medical Center, Dallas, TX,Department of Psychiatry, UT Southwestern Medical Center, Dallas, TX
| | - Brad E Pfeiffer
- Department of Neuroscience, UT Southwestern Medical Center, Dallas, TX,O’Donnell Brain Institute, UT Southwestern Medical Center, Dallas, TX
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Maternal Hyperhomocysteinemia Disturbs the Mechanisms of Embryonic Brain Development and Its Maturation in Early Postnatal Ontogenesis. Cells 2023; 12:cells12010189. [PMID: 36611982 PMCID: PMC9818313 DOI: 10.3390/cells12010189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2022] [Revised: 12/19/2022] [Accepted: 12/27/2022] [Indexed: 01/05/2023] Open
Abstract
Maternal hyperhomocysteinemia causes the disruption of placental blood flow and can lead to serious disturbances in the formation of the offspring's brain. In the present study, the effects of prenatal hyperhomocysteinemia (PHHC) on the neuronal migration, neural tissue maturation, and the expression of signaling molecules in the rat fetal brain were described. Maternal hyperhomocysteinemia was induced in female rats by per os administration of 0.15% aqueous methionine solution in the period of days 4-21 of pregnancy. Behavioral tests revealed a delay in PHHC male pups maturing. Ultrastructure of both cortical and hippocampus tissue demonstrated the features of the developmental delay. PHHC was shown to disturb both generation and radial migration of neuroblasts into the cortical plate. Elevated Bdnf expression, together with changes in proBDNF/mBDNF balance, might affect neuronal cell viability, positioning, and maturation in PHHC pups. Reduced Kdr gene expression and the content of SEMA3E might lead to impaired brain development. In the brain tissue of E20 PHHC fetuses, the content of the procaspase-8 was decreased, and the activity level of the caspase-3 was increased; this may indicate the development of apoptosis. PHHC disturbs the mechanisms of early brain development leading to a delay in brain tissue maturation and formation of the motor reaction of pups.
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Fernandez-Leon JA, Uysal AK, Ji D. Place cells dynamically refine grid cell activities to reduce error accumulation during path integration in a continuous attractor model. Sci Rep 2022; 12:21443. [PMID: 36509873 PMCID: PMC9744848 DOI: 10.1038/s41598-022-25863-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Accepted: 12/06/2022] [Indexed: 12/14/2022] Open
Abstract
Navigation is one of the most fundamental skills of animals. During spatial navigation, grid cells in the medial entorhinal cortex process speed and direction of the animal to map the environment. Hippocampal place cells, in turn, encode place using sensory signals and reduce the accumulated error of grid cells for path integration. Although both cell types are part of the path integration system, the dynamic relationship between place and grid cells and the error reduction mechanism is yet to be understood. We implemented a realistic model of grid cells based on a continuous attractor model. The grid cell model was coupled to a place cell model to address their dynamic relationship during a simulated animal's exploration of a square arena. The grid cell model processed the animal's velocity and place field information from place cells. Place cells incorporated salient visual features and proximity information with input from grid cells to define their place fields. Grid cells had similar spatial phases but a diversity of spacings and orientations. To determine the role of place cells in error reduction for path integration, the animal's position estimates were decoded from grid cell activities with and without the place field input. We found that the accumulated error was reduced as place fields emerged during the exploration. Place fields closer to the animal's current location contributed more to the error reduction than remote place fields. Place cells' fields encoding space could function as spatial anchoring signals for precise path integration by grid cells.
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Affiliation(s)
- Jose A Fernandez-Leon
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
- Universidad Nacional del Centro de la Provincia de Buenos Aires (UNCPBA), Facultad de Ciencias Exactas, INTIA, Tandil, Buenos Aires, Argentina.
- CIFICEN, UNCPBA-CICPBA-CONICET, Tandil, Argentina.
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.
| | - Ahmet Kerim Uysal
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
| | - Daoyun Ji
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
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Asiminas A, Lyon SA, Langston RF, Wood ER. Developmental trajectory of episodic-like memory in rats. Front Behav Neurosci 2022; 16:969871. [PMID: 36523755 PMCID: PMC9745197 DOI: 10.3389/fnbeh.2022.969871] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Accepted: 11/08/2022] [Indexed: 08/17/2023] Open
Abstract
Introduction Episodic memory formation requires the binding of multiple associations to a coherent episodic representation, with rich detail of times, places, and contextual information. During postnatal development, the ability to recall episodic memories emerges later than other types of memory such as object recognition. However, the precise developmental trajectory of episodic memory, from weaning to adulthood has not yet been established in rats. Spontaneous object exploration tasks do not require training, and allow repeated testing of subjects, provided novel objects are used on each trial. Therefore, these tasks are ideally suited for the study of the ontogeny of episodic memory and its constituents (e.g., object, spatial, and contextual memory). Methods In the present study, we used four spontaneous short-term object exploration tasks over two days: object (OR), object-context (OCR), object-place (OPR), and object-place-context (OPCR) recognition to characterise the ontogeny of episodic-like memory and its components in three commonly used outbred rat strains (Lister Hooded, Long Evans Hooded, and Sprague Dawley). Results In longitudinal studies starting at 3-4 weeks of age, we observed that short term memory for objects was already present at the earliest time point we tested, indicating that it is established before the end of the third week of life (consistent with several other reports). Object-context memory developed during the fifth week of life, while both object-in-place and the episodic-like object-place-context memory developed around the seventh postnatal week. To control for the effects of previous experience in the development of associative memory, we confirmed these developmental trajectories using a cross-sectional protocol. Discussion Our work provides robust evidence for different developmental trajectories of recognition memory in rats depending on the content and/or complexity of the associations and emphasises the utility of spontaneous object exploration tasks to assess the ontogeny of memory systems with high temporal resolution.
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Affiliation(s)
- Antonis Asiminas
- Centre for Discovery Brain Sciences, University of Edinburgh, Edinburgh, United Kingdom
- Simons Initiative for the Developing Brain, University of Edinburgh, Edinburgh, United Kingdom
- Patrick Wild Centre, University of Edinburgh, Edinburgh, United Kingdom
- Center for Translational Neuromedicine, University of Copenhagen, Copenhagen, Denmark
| | - Stephanie A. Lyon
- Cellular and Systems Medicine, Ninewells Hospital and Medical School, University of Dundee, Dundee, United Kingdom
| | - Rosamund F. Langston
- Cellular and Systems Medicine, Ninewells Hospital and Medical School, University of Dundee, Dundee, United Kingdom
| | - Emma R. Wood
- Centre for Discovery Brain Sciences, University of Edinburgh, Edinburgh, United Kingdom
- Simons Initiative for the Developing Brain, University of Edinburgh, Edinburgh, United Kingdom
- Patrick Wild Centre, University of Edinburgh, Edinburgh, United Kingdom
- Centre for Brain Development and Repair, Bengaluru, India
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Linking global top-down views to first-person views in the brain. Proc Natl Acad Sci U S A 2022; 119:e2202024119. [PMID: 36322732 PMCID: PMC9659407 DOI: 10.1073/pnas.2202024119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
Abstract
Humans and other animals have a remarkable capacity to translate their position from one spatial frame of reference to another. The ability to seamlessly move between top-down and first-person views is important for navigation, memory formation, and other cognitive tasks. Evidence suggests that the medial temporal lobe and other cortical regions contribute to this function. To understand how a neural system might carry out these computations, we used variational autoencoders (VAEs) to reconstruct the first-person view from the top-down view of a robot simulation, and vice versa. Many latent variables in the VAEs had similar responses to those seen in neuron recordings, including location-specific activity, head direction tuning, and encoding of distance to local objects. Place-specific responses were prominent when reconstructing a first-person view from a top-down view, but head direction-specific responses were prominent when reconstructing a top-down view from a first-person view. In both cases, the model could recover from perturbations without retraining, but rather through remapping. These results could advance our understanding of how brain regions support viewpoint linkages and transformations.
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Khona M, Fiete IR. Attractor and integrator networks in the brain. Nat Rev Neurosci 2022; 23:744-766. [DOI: 10.1038/s41583-022-00642-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/22/2022] [Indexed: 11/06/2022]
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Sharma A, Nair IR, Yoganarasimha D. Attractor-like Dynamics in the Subicular Complex. J Neurosci 2022; 42:7594-7614. [PMID: 36028315 PMCID: PMC9546466 DOI: 10.1523/jneurosci.2048-20.2022] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2020] [Revised: 07/02/2022] [Accepted: 07/15/2022] [Indexed: 02/02/2023] Open
Abstract
Distinct computations are performed at multiple brain regions during the encoding of spatial environments. Neural representations in the hippocampal, entorhinal, and head direction (HD) networks during spatial navigation have been clearly documented, while the representational properties of the subicular complex (SC) are relatively underexplored, although it has extensive anatomic connections with various brain regions involved in spatial information processing. We simultaneously recorded single units from different subregions of the SC in male rats while they ran clockwise on a centrally placed textured circular track (four different textures, each covering a quadrant), surrounded by six distal cues. The neural activity was monitored in standard sessions by maintaining the same configuration between the cues, while in cue manipulation sessions, the distal and local cues were either rotated in opposite directions to create a mismatch between them or the distal cues were removed. We report a highly coherent neural representation of the environment and a robust coupling between the HD cells and the spatial cells in the SC, strikingly different from previous reports of coupling between cells from co-recorded sites. Neural representations were (1) originally governed by the distal cues under local-distal cue-conflict conditions, (2) controlled by the local cues in the absence of distal cues, and (3) governed by the cues that are perceived to be stable. We propose that such attractor-like dynamics in the SC might play a critical role in the orientation of spatial representations, thus providing a "reference map" of the environment for further processing by other networks.SIGNIFICANCE STATEMENT The subicular complex (SC) receives major inputs from the entorhinal cortex and the hippocampus, and head direction (HD) information directly from the HD system. Using cue-conflict experiments, we studied the hierarchical representation of the local and distal cues in the SC to understand its role in the cognitive map, and report a highly coherent neural representation with robust coupling between the HD cells and the spatial cells in different subregions of the SC exhibiting attractor-like dynamics unaffected by the cue manipulations, strikingly different from previous reports of coupling between cells from co-recorded sites. This unique feature may allow the SC to function as a single computational unit during the representation of space, which may serve as a reference map of the environment.
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Affiliation(s)
- Apoorv Sharma
- Division of Systems Neuroscience, National Brain Research Centre, Manesar, Haryana 122051, India
| | - Indrajith R Nair
- Division of Systems Neuroscience, National Brain Research Centre, Manesar, Haryana 122051, India
| | - Doreswamy Yoganarasimha
- Department of Neurophysiology, National Institute of Mental Health and Neuro Sciences, Bengaluru, Karnataka 560029, India
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Rondi-Reig L, Paradis AL, Fallahnezhad M. A Liaison Brought to Light: Cerebellum-Hippocampus, Partners for Spatial Cognition. CEREBELLUM (LONDON, ENGLAND) 2022; 21:826-837. [PMID: 35752720 DOI: 10.1007/s12311-022-01422-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 05/24/2022] [Indexed: 01/18/2023]
Abstract
This review focuses on the functional and anatomical links between the cerebellum and the hippocampus and the role of their interplay in goal-directed navigation and spatial cognition. We will describe the interactions between the cerebellum and the hippocampus at different scales: a macroscopic scale revealing the joint activations of these two structures at the level of neuronal circuits, a mesoscopic scale highlighting the synchronization of neuronal oscillations, and finally a cellular scale where we will describe the activity of hippocampal neuronal assemblies following a targeted manipulation of the cerebellar system. We will take advantage of this framework to summarize the different anatomical pathways that may sustain this multiscale interaction. We will finally consider the possible influence of the cerebellum on pathologies traditionally associated with hippocampal dysfunction.
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Affiliation(s)
- Laure Rondi-Reig
- Institut de Biologie Paris Seine (IBPS), Cerebellum Navigation and Memory Team (CeZaMe), Sorbonne Université, CNRS, INSERM, Neurosciences Paris Seine (NPS), 75005, Paris, France.
| | - Anne-Lise Paradis
- Institut de Biologie Paris Seine (IBPS), Cerebellum Navigation and Memory Team (CeZaMe), Sorbonne Université, CNRS, INSERM, Neurosciences Paris Seine (NPS), 75005, Paris, France
| | - Mehdi Fallahnezhad
- Institut de Biologie Paris Seine (IBPS), Cerebellum Navigation and Memory Team (CeZaMe), Sorbonne Université, CNRS, INSERM, Neurosciences Paris Seine (NPS), 75005, Paris, France
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Short-Term Fish Oil Supplementation during Adolescence Supports Sex-Specific Impact on Adulthood Visuospatial Memory and Cognitive Flexibility. Nutrients 2022; 14:nu14173513. [PMID: 36079771 PMCID: PMC9459882 DOI: 10.3390/nu14173513] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 08/22/2022] [Accepted: 08/23/2022] [Indexed: 11/16/2022] Open
Abstract
Numerous studies have supported benefits of omega-3 supplementation using Menhaden fish oil (FO) to promote brain maturation and plasticity during critical developmental periods. The goal of this study was to determine sex-specific immediate and delayed impact of adolescent omega-3 supplementation on visuospatial memory and cognitive flexibility. Sixty-four Wistar rats (n = 32 males and females) received daily FO or soybean oil (CSO) supplementation via oral gavage (0.3 mL/100 g body weight) from postnatal day 28–47. The Barnes Maze Test (BMT) was used to measure visuospatial memory and reversal learning trials (RL) determined cognitive flexibility. Juveniles underwent testing immediately after the gavage period, while adults began testing on postnatal day 90. Adult rats showed reduced working memory errors (WME) and gradual decrease in escape latencies compared to juveniles. Importantly, adult FO-supplemented females displayed fewer WME than males, while males’ performance benefited from CSO supplementation. Overall, sex- and supplementation-dependent effects supported a positive impact of FO in female rats only. Our findings support the potential for supplementation limited to the early adolescence period to influence adulthood spatial learning and cognitive flexibility in a sex-specific manner.
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Ben-Simon Y, Kaefer K, Velicky P, Csicsvari J, Danzl JG, Jonas P. A direct excitatory projection from entorhinal layer 6b neurons to the hippocampus contributes to spatial coding and memory. Nat Commun 2022; 13:4826. [PMID: 35974109 PMCID: PMC9381769 DOI: 10.1038/s41467-022-32559-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Accepted: 08/03/2022] [Indexed: 11/08/2022] Open
Abstract
The mammalian hippocampal formation (HF) plays a key role in several higher brain functions, such as spatial coding, learning and memory. Its simple circuit architecture is often viewed as a trisynaptic loop, processing input originating from the superficial layers of the entorhinal cortex (EC) and sending it back to its deeper layers. Here, we show that excitatory neurons in layer 6b of the mouse EC project to all sub-regions comprising the HF and receive input from the CA1, thalamus and claustrum. Furthermore, their output is characterized by unique slow-decaying excitatory postsynaptic currents capable of driving plateau-like potentials in their postsynaptic targets. Optogenetic inhibition of the EC-6b pathway affects spatial coding in CA1 pyramidal neurons, while cell ablation impairs not only acquisition of new spatial memories, but also degradation of previously acquired ones. Our results provide evidence of a functional role for cortical layer 6b neurons in the adult brain.
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Affiliation(s)
- Yoav Ben-Simon
- Institute of Science and Technology Austria (ISTA), Klosterneuburg, Austria.
- Department of Neurophysiology and Pharmacology, Vienna Medical University, Vienna, Austria.
| | - Karola Kaefer
- Institute of Science and Technology Austria (ISTA), Klosterneuburg, Austria
- Department of Neuroinformatics, Radboud University, Nijmegen, The Netherlands
| | - Philipp Velicky
- Institute of Science and Technology Austria (ISTA), Klosterneuburg, Austria
| | - Jozsef Csicsvari
- Institute of Science and Technology Austria (ISTA), Klosterneuburg, Austria
| | - Johann G Danzl
- Institute of Science and Technology Austria (ISTA), Klosterneuburg, Austria
| | - Peter Jonas
- Institute of Science and Technology Austria (ISTA), Klosterneuburg, Austria
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36
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Carruthers P, Williams DM. Model-free metacognition. Cognition 2022; 225:105117. [DOI: 10.1016/j.cognition.2022.105117] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 03/25/2022] [Accepted: 03/31/2022] [Indexed: 01/08/2023]
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Animal-to-Animal Variability in Partial Hippocampal Remapping in Repeated Environments. J Neurosci 2022; 42:5268-5280. [PMID: 35641190 PMCID: PMC9236289 DOI: 10.1523/jneurosci.3221-20.2022] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2020] [Revised: 04/11/2022] [Accepted: 05/10/2022] [Indexed: 12/31/2022] Open
Abstract
Hippocampal place cells form a map of the environment of an animal. Changes in the hippocampal map can be brought about in a number of ways, including changes to the environment, task, internal state of the subject, and the passage of time. These changes in the hippocampal map have been called remapping. In this study, we examine remapping during repeated exposure to the same environment. Different animals can have different remapping responses to the same changes. This variability across animals in remapping behavior is not well understood. In this work, we analyzed electrophysiological recordings from the CA3 region of the hippocampus performed by Alme et al. (2014), in which five male rats were exposed to 11 different environments, including a variety of repetitions of those environments. To compare the hippocampal maps between two experiences, we computed average rate map correlation coefficients. We found changes in the hippocampal maps between different sessions in the same environment. These changes consisted of partial remapping, a form of remapping in which some place cells maintain their place fields, whereas other place cells remap their place fields. Each animal exhibited partial remapping differently. We discovered that the heterogeneity in hippocampal representational changes across animals is structured; individual animals had consistently different levels of partial remapping across a range of independent comparisons. Our findings highlight that partial hippocampal remapping between repeated environments depends on animal-specific factors.SIGNIFICANCE STATEMENT Context identification is a difficult problem. Animals are not provided with objective context identity labels, so they must infer which experiences come from which contexts. Different animals may have different strategies for performing this inference. We find that different animals have stereotypically different extents of partial hippocampal remapping, a neural correlate of subjective assessment of context identity.
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Lagartos-Donate MJ, Doan TP, Girão PJB, Witter MP. Postnatal development of projections of the postrhinal cortex to the entorhinal cortex in the rat. eNeuro 2022; 9:ENEURO.0057-22.2022. [PMID: 35715208 PMCID: PMC9239852 DOI: 10.1523/eneuro.0057-22.2022] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Revised: 05/24/2022] [Accepted: 06/01/2022] [Indexed: 11/23/2022] Open
Abstract
The ability to encode and retrieve contextual information is an inherent feature of episodic memory that starts to develop during childhood. The postrhinal cortex, an area of the parahippocampal region, has a crucial role in encoding object-space information and translating egocentric to allocentric representation of local space. The strong connectivity of POR with the adjacent entorhinal cortex, and consequently the hippocampus, suggests that the development of these connections could support the postnatal development of contextual memory. Here, we report that postrhinal cortex projections of the rat develop progressively from the first to the third postnatal week starting in the medial entorhinal cortex before spreading to the lateral entorhinal cortex. The increased spread and complexity of postrhinal axonal distributions is accompanied by an increased complexity of entorhinal dendritic trees and an increase of postrhinal - entorhinal synapses, which supports a gradual maturation in functional activity.SIGNIFICANCE STATEMENTPostrhinal-entorhinal cortical interplay mediates important aspects of encoding and retrieval of contextual information that is important for episodic memory. To better understand the function of the postrhinal interactions with the entorhinal cortex we studied the postnatal development of the connection between the two cortical areas. Our study describes the postnatal development of the postrhinal-to-entorhinal projections as established with neuroanatomical and electrophysiological methods. The projections gradually reach functionally different areas of the entorhinal cortex, reaching the area involved in spatial functions first, followed by the part involved in representing information about objects and sequences of events.
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Affiliation(s)
- Maria Jose Lagartos-Donate
- Kavli Institute for Systems Neuroscience, Centre for Neural Computation, and Egil and Pauline Braathen and Fred Kavli Centre for Cortical Microcircuits, NTNU Norwegian University of Science and Technology, 7491 Trondheim, Norway
- Department of Clinical Molecular Biology, University of Oslo and Akershus University Hospital, 1478 Lørenskog, Norway
| | - Thanh Pierre Doan
- Kavli Institute for Systems Neuroscience, Centre for Neural Computation, and Egil and Pauline Braathen and Fred Kavli Centre for Cortical Microcircuits, NTNU Norwegian University of Science and Technology, 7491 Trondheim, Norway
- Department of Neurology and Clinical Neurophysiology, St. Olav's University Hospital, 7030 Trondheim, Norway
- Department of Neuromedicine and Movement Science, NTNU, N-7491 Trondheim, Norway
| | - Paulo J B Girão
- Kavli Institute for Systems Neuroscience, Centre for Neural Computation, and Egil and Pauline Braathen and Fred Kavli Centre for Cortical Microcircuits, NTNU Norwegian University of Science and Technology, 7491 Trondheim, Norway
| | - Menno P Witter
- Kavli Institute for Systems Neuroscience, Centre for Neural Computation, and Egil and Pauline Braathen and Fred Kavli Centre for Cortical Microcircuits, NTNU Norwegian University of Science and Technology, 7491 Trondheim, Norway
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Anstötz M, Lee SK, Maccaferri G. Glutamate released by Cajal-Retzius cells impacts specific hippocampal circuits and behaviors. Cell Rep 2022; 39:110822. [PMID: 35584670 PMCID: PMC9190441 DOI: 10.1016/j.celrep.2022.110822] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 03/23/2022] [Accepted: 04/23/2022] [Indexed: 12/31/2022] Open
Abstract
The impact of Cajal-Retzius cells on the regulation of hippocampal circuits and related behaviors is unresolved. Here, we directly address this issue by impairing the glutamatergic output of Cajal-Retzius cells with the conditional ablation of vGluT2, which is their main vesicular glutamate transporter. Although two distinct conditional knockout lines do not reveal major alterations in hippocampal-layer organization and dendritic length of principal neurons or GABAergic cells, we find parallel deficits in specific hippocampal-dependent behaviors and in their putative underlying microcircuits. First, conditional knockout animals show increased innate anxiety and decreased feedforward GABAergic inhibition on dentate gyrus granule cells. Second, we observe impaired spatial memory processing, which is associated with decreased spine density and reduced AMPA/NMDA ratio of postsynaptic responses at the perforant- and entorhino-hippocampal pathways. We conclude that glutamate synaptically released by Cajal-Retzius cells is critical for the regulation of hippocampal microcircuits and specific types of behaviors. Anstötz et al. report that postnatal hippocampal Cajal-Retzius cells use vGluT2 as their main glutamate vesicular transporter. Conditional inactivation of vGluT2 in mice reveals both behavioral and network alterations. The observed results indicate the involvement of Cajal-Retzius cells in the regulation of innate anxiety/spatial memory and in potentially related neuronal circuits.
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Affiliation(s)
- Max Anstötz
- Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA; Institute of Anatomy II, Medical Faculty, Heinrich-Heine-University, Düsseldorf 40225, Germany.
| | - Sun Kyong Lee
- Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA
| | - Gianmaria Maccaferri
- Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
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Sakimoto Y, Shintani A, Yoshiura D, Goshima M, Kida H, Mitsushima D. A critical period for learning and plastic changes at hippocampal CA1 synapses. Sci Rep 2022; 12:7199. [PMID: 35504922 PMCID: PMC9065057 DOI: 10.1038/s41598-022-10453-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Accepted: 03/24/2022] [Indexed: 02/07/2023] Open
Abstract
Postnatal development of hippocampal function has been reported in many mammalian species, including humans. To obtain synaptic evidence, we analyzed developmental changes in plasticity after an inhibitory avoidance task in rats. Learning performance was low in infants (postnatal 2 weeks) but clearly improved from the juvenile period (3-4 weeks) to adulthood (8 weeks). One hour after the training, we prepared brain slices and sequentially recorded miniature excitatory postsynaptic currents (mEPSCs) and inhibitory postsynaptic currents (mIPSCs) from the same hippocampal CA1 neuron. Although the training failed to affect the amplitude of either mEPSCs or mIPSCs at 2 weeks, it increased mEPSC, but not mIPSC, amplitude at 3 weeks. At 4 weeks, the training had increased the amplitude of both mEPSCs and mIPSCs, whereas mIPSC, but not mEPSC, amplitude was increased at 8 weeks. Because early-life physiological functions can affect performance, we also evaluated sensory-motor functions together with emotional state and found adequate sensory/motor functions from infancy to adulthood. Moreover, by analyzing performance of rats in multiple hippocampal-dependent tasks, we found that the developmental changes in the performance are task dependent. Taken together, these findings delineate a critical period for learning and plastic changes at hippocampal CA1 synapses.
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Affiliation(s)
- Yuya Sakimoto
- Department of Physiology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan.
| | - Ako Shintani
- Department of Physiology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan
| | - Daiki Yoshiura
- Department of Physiology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan
| | - Makoto Goshima
- Department of Physiology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan
| | - Hiroyuki Kida
- Department of Physiology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan
| | - Dai Mitsushima
- Department of Physiology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan.
- The Research Institute for Time Studies, Yamaguchi University, Yamaguchi, 753-8511, Japan.
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41
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Yu N, Liao Y, Yu H, Sie O. Construction of the rat brain spatial cell firing model on a quadruped robot. CAAI TRANSACTIONS ON INTELLIGENCE TECHNOLOGY 2022. [DOI: 10.1049/cit2.12091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Affiliation(s)
- Naigong Yu
- Faculty of Information Technology Beijing University of Technology Beijing China
- Beijing Key Laboratory of Computational Intelligence and Intelligent System Beijing China
- Engineering Research Center of Digital Community Ministry of Education Beijing China
| | - Yishen Liao
- Faculty of Information Technology Beijing University of Technology Beijing China
- Beijing Key Laboratory of Computational Intelligence and Intelligent System Beijing China
- Engineering Research Center of Digital Community Ministry of Education Beijing China
| | - Hejie Yu
- Faculty of Information Technology Beijing University of Technology Beijing China
- Beijing Key Laboratory of Computational Intelligence and Intelligent System Beijing China
- Engineering Research Center of Digital Community Ministry of Education Beijing China
| | - Ouattara Sie
- Faculty of Information Technology Beijing University of Technology Beijing China
- Beijing Key Laboratory of Computational Intelligence and Intelligent System Beijing China
- Engineering Research Center of Digital Community Ministry of Education Beijing China
- College of Robotic Université Félix Houphouët‐Boigny Abidjan Côte d'Ivoire
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42
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Abstract
The investigation of the topographic organization of spatially coding cell types in the medial entorhinal cortex (MEC) has so far been held back by the lack of appropriate tools that enable the precise recording of both the anatomical location and activity of large populations of cells while animals forage in open environments. In this study, we use the newest generation of head-mounted, miniaturized two-photon microscopes to image grid, head-direction, border, as well as object-vector cells in MEC and neighboring parasubiculum within the same animals. The majority of cell types were intermingled, but grid and object-vector cells exhibited little overlap. The results have implications for network models of spatial coding. The medial entorhinal cortex (MEC) creates a map of local space, based on the firing patterns of grid, head-direction (HD), border, and object-vector (OV) cells. How these cell types are organized anatomically is debated. In-depth analysis of this question requires collection of precise anatomical and activity data across large populations of neurons during unrestrained behavior, which neither electrophysiological nor previous imaging methods fully afford. Here, we examined the topographic arrangement of spatially modulated neurons in the superficial layers of MEC and adjacent parasubiculum using miniaturized, portable two-photon microscopes, which allow mice to roam freely in open fields. Grid cells exhibited low levels of co-occurrence with OV cells and clustered anatomically, while border, HD, and OV cells tended to intermingle. These data suggest that grid cell networks might be largely distinct from those of border, HD, and OV cells and that grid cells exhibit strong coupling among themselves but weaker links to other cell types.
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43
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Keith RE, Ogoe RH, Dumas TC. Behind the scenes: Are latent memories supported by calcium independent plasticity? Hippocampus 2022; 32:73-88. [PMID: 33905147 PMCID: PMC8548406 DOI: 10.1002/hipo.23332] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2020] [Revised: 04/08/2021] [Accepted: 04/11/2021] [Indexed: 02/03/2023]
Abstract
N-methyl-D-aspartate receptors (NMDARs) can be considered to be the de facto "plasticity" receptors in the brain due to their central role in the activity-dependent modification of neuronal morphology and synaptic transmission. Since the 1980s, research on NMDARs has focused on the second messenger properties of calcium and the downstream signaling pathways that mediate alterations in neural form and function. Recently, NMDARs were shown to drive activity-dependent synaptic plasticity without calcium influx. How this "nonionotropic" plasticity occurs in vitro is becoming clearer, but research on its involvement in behavior and cognition is in its infancy. There is a partial overlap in the downstream signaling molecules that are involved in ionotropic and nonionotropic NMDAR-dependent plasticity. Given this, and prior studies of the cognitive impacts of ionotropic NMDAR plasticity, a preliminary model explaining how NMDAR nonionotropic plasticity affects learning and memory can be established. We hypothesize that nonionotropic NMDAR plasticity takes part in latent memory encoding in immature rodents through nonassociative depression of synaptic efficacy, and possibly shrinking of dendritic spines. Further, the late postnatal alteration in NMDAR composition in the hippocampus appears to reduce nonionotropic signaling and remove a restriction on memory retrieval. This framework substantially alters the canonical model of NMDAR involvement in spatial cognition and hippocampal maturation and provides novel and exciting inroads for future studies.
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Affiliation(s)
- Rachel E. Keith
- Interdisciplinary Program in Neuroscience, College of Science, George Mason University, Fairfax, Virginia
| | - Richard H. Ogoe
- Department of Psychology, College of Humanities and Social Sciences, George Mason University, Fairfax, Virginia
| | - Theodore C. Dumas
- Interdisciplinary Program in Neuroscience, College of Science, George Mason University, Fairfax, Virginia,Department of Psychology, College of Humanities and Social Sciences, George Mason University, Fairfax, Virginia
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44
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Sheintuch L, Rubin A, Ziv Y. Bias-free estimation of information content in temporally sparse neuronal activity. PLoS Comput Biol 2022; 18:e1009832. [PMID: 35148310 PMCID: PMC8836373 DOI: 10.1371/journal.pcbi.1009832] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Accepted: 01/13/2022] [Indexed: 11/20/2022] Open
Abstract
Applying information theoretic measures to neuronal activity data enables the quantification of neuronal encoding quality. However, when the sample size is limited, a naïve estimation of the information content typically contains a systematic overestimation (upward bias), which may lead to misinterpretation of coding characteristics. This bias is exacerbated in Ca2+ imaging because of the temporal sparsity of elevated Ca2+ signals. Here, we introduce methods to correct for the bias in the naïve estimation of information content from limited sample sizes and temporally sparse neuronal activity. We demonstrate the higher accuracy of our methods over previous ones, when applied to Ca2+ imaging data recorded from the mouse hippocampus and primary visual cortex, as well as to simulated data with matching tuning properties and firing statistics. Our bias-correction methods allowed an accurate estimation of the information place cells carry about the animal's position (spatial information) and uncovered the spatial resolution of hippocampal coding. Furthermore, using our methods, we found that cells with higher peak firing rates carry higher spatial information per spike and exposed differences between distinct hippocampal subfields in the long-term evolution of the spatial code. These results could be masked by the bias when applying the commonly used naïve calculation of information content. Thus, a bias-free estimation of information content can uncover otherwise overlooked properties of the neural code.
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Affiliation(s)
- Liron Sheintuch
- Department of Neurobiology, Weizmann Institute of Science, Rehovot, Israel
| | - Alon Rubin
- Department of Neurobiology, Weizmann Institute of Science, Rehovot, Israel
| | - Yaniv Ziv
- Department of Neurobiology, Weizmann Institute of Science, Rehovot, Israel
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45
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Gardner RJ, Hermansen E, Pachitariu M, Burak Y, Baas NA, Dunn BA, Moser MB, Moser EI. Toroidal topology of population activity in grid cells. Nature 2022; 602:123-128. [PMID: 35022611 PMCID: PMC8810387 DOI: 10.1038/s41586-021-04268-7] [Citation(s) in RCA: 125] [Impact Index Per Article: 62.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2021] [Accepted: 11/19/2021] [Indexed: 01/24/2023]
Abstract
The medial entorhinal cortex is part of a neural system for mapping the position of an individual within a physical environment1. Grid cells, a key component of this system, fire in a characteristic hexagonal pattern of locations2, and are organized in modules3 that collectively form a population code for the animal's allocentric position1. The invariance of the correlation structure of this population code across environments4,5 and behavioural states6,7, independent of specific sensory inputs, has pointed to intrinsic, recurrently connected continuous attractor networks (CANs) as a possible substrate of the grid pattern1,8-11. However, whether grid cell networks show continuous attractor dynamics, and how they interface with inputs from the environment, has remained unclear owing to the small samples of cells obtained so far. Here, using simultaneous recordings from many hundreds of grid cells and subsequent topological data analysis, we show that the joint activity of grid cells from an individual module resides on a toroidal manifold, as expected in a two-dimensional CAN. Positions on the torus correspond to positions of the moving animal in the environment. Individual cells are preferentially active at singular positions on the torus. Their positions are maintained between environments and from wakefulness to sleep, as predicted by CAN models for grid cells but not by alternative feedforward models12. This demonstration of network dynamics on a toroidal manifold provides a population-level visualization of CAN dynamics in grid cells.
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Affiliation(s)
- Richard J Gardner
- Kavli Institute for Systems Neuroscience and Centre for Neural Computation, Norwegian University of Science and Technology, Trondheim, Norway.
| | - Erik Hermansen
- Department of Mathematical Sciences, Norwegian University of Science and Technology, Trondheim, Norway
| | | | - Yoram Burak
- Edmond and Lily Safra Center for Brain Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel
- Racah Institute of Physics, The Hebrew University of Jerusalem, Jerusalem, Israel
| | - Nils A Baas
- Department of Mathematical Sciences, Norwegian University of Science and Technology, Trondheim, Norway.
| | - Benjamin A Dunn
- Kavli Institute for Systems Neuroscience and Centre for Neural Computation, Norwegian University of Science and Technology, Trondheim, Norway.
- Department of Mathematical Sciences, Norwegian University of Science and Technology, Trondheim, Norway.
| | - May-Britt Moser
- Kavli Institute for Systems Neuroscience and Centre for Neural Computation, Norwegian University of Science and Technology, Trondheim, Norway
| | - Edvard I Moser
- Kavli Institute for Systems Neuroscience and Centre for Neural Computation, Norwegian University of Science and Technology, Trondheim, Norway.
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46
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Ohana O, Alberini CM, Donato F. Introduction to the special issue on the ontogeny of hippocampal functions. Hippocampus 2022; 32:69-72. [PMID: 35005808 PMCID: PMC9303776 DOI: 10.1002/hipo.23406] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Affiliation(s)
- Ora Ohana
- Institute for Molecular and Cellular Cognition, University Medical Center Hamburg-Eppendorf, Hamburg, Germany
| | | | - Flavio Donato
- Biozentrum of the University of Basel, Basel, Switzerland
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47
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Zhao D, Zhang Z, Lu H, Cheng S, Si B, Feng X. Learning Cognitive Map Representations for Navigation by Sensory-Motor Integration. IEEE TRANSACTIONS ON CYBERNETICS 2022; 52:508-521. [PMID: 32275629 DOI: 10.1109/tcyb.2020.2977999] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
How to transform a mixed flow of sensory and motor information into memory state of self-location and to build map representations of the environment are central questions in the navigation research. Studies in neuroscience have shown that place cells in the hippocampus of the rodent brains form dynamic cognitive representations of locations in the environment. We propose a neural-network model called sensory-motor integration network model (SeMINet) to learn cognitive map representations by integrating sensory and motor information while an agent is exploring a virtual environment. This biologically inspired model consists of a deep neural network representing visual features of the environment, a recurrent network of place units encoding spatial information by sensorimotor integration, and a secondary network to decode the locations of the agent from spatial representations. The recurrent connections between the place units sustain an activity bump in the network without the need of sensory inputs, and the asymmetry in the connections propagates the activity bump in the network, forming a dynamic memory state which matches the motion of the agent. A competitive learning process establishes the association between the sensory representations and the memory state of the place units, and is able to correct the cumulative path-integration errors. The simulation results demonstrate that the network forms neural codes that convey location information of the agent independent of its head direction. The decoding network reliably predicts the location even when the movement is subject to noise. The proposed SeMINet thus provides a brain-inspired neural-network model for cognitive map updated by both self-motion cues and visual cues.
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48
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The hippocampal formation and action at a distance. Proc Natl Acad Sci U S A 2021; 118:2119670118. [PMID: 34916299 DOI: 10.1073/pnas.2119670118] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/15/2021] [Indexed: 11/18/2022] Open
Abstract
The question of why our conceptions of space and time are intertwined with memory in the hippocampal formation is at the forefront of much current theorizing about this brain system. In this article I argue that animals bridge spatial and temporal gaps through the creation of internal models that allow them to act on the basis of things that exist in a distant place and/or existed at a different time. The hippocampal formation plays a critical role in these processes by stitching together spatiotemporally disparate entities and events. It does this by 1) constructing cognitive maps that represent extended spatial contexts, incorporating and linking aspects of an environment that may never have been experienced together; 2) creating neural trajectories that link the parts of an event, whether they occur in close temporal proximity or not, enabling the construction of event representations even when elements of that event were experienced at quite different times; and 3) using these maps and trajectories to simulate possible futures. As a function of these hippocampally driven processes, our subjective sense of both space and time are interwoven constructions of the mind, much as the philosopher Immanuel Kant postulated.
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49
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Segen V, Ying J, Morgan E, Brandon M, Wolbers T. Path integration in normal aging and Alzheimer's disease. Trends Cogn Sci 2021; 26:142-158. [PMID: 34872838 DOI: 10.1016/j.tics.2021.11.001] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Revised: 11/02/2021] [Accepted: 11/04/2021] [Indexed: 12/20/2022]
Abstract
In this review we discuss converging evidence from human and rodent research demonstrating how path integration (PI) is impaired in healthy aging and Alzheimer's disease (AD), and point to the neural mechanisms that underlie these deficits. Importantly, we highlight that (i) the grid cell network in the entorhinal cortex is crucial for PI in both humans and rodents, (ii) PI deficits are present in healthy aging and are significantly more pronounced in patients with early-stage AD, (iii) compromised entorhinal grid cell computations in healthy older adults and in young adults at risk of AD are linked to PI deficits, and (iv) PI and grid cell deficits may serve as sensitive markers for pathological decline in early AD.
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Affiliation(s)
- Vladislava Segen
- Aging and Cognition Research Group, German Center for Neurodegenerative Diseases (DZNE), Magdeburg 39120, Germany.
| | - Johnson Ying
- Douglas Hospital Research Center, McGill University, Montreal, QC, Canada
| | - Erik Morgan
- Douglas Hospital Research Center, McGill University, Montreal, QC, Canada
| | - Mark Brandon
- Douglas Hospital Research Center, McGill University, Montreal, QC, Canada
| | - Thomas Wolbers
- Aging and Cognition Research Group, German Center for Neurodegenerative Diseases (DZNE), Magdeburg 39120, Germany.
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50
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Ross TW, Easton A. The Hippocampal Horizon: Constructing and Segmenting Experience for Episodic Memory. Neurosci Biobehav Rev 2021; 132:181-196. [PMID: 34826509 DOI: 10.1016/j.neubiorev.2021.11.038] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Revised: 11/19/2021] [Accepted: 11/22/2021] [Indexed: 12/29/2022]
Abstract
How do we recollect specific events that have occurred during continuous ongoing experience? There is converging evidence from non-human animals that spatially modulated cellular activity of the hippocampal formation supports the construction of ongoing events. On the other hand, recent human oriented event cognition models have outlined that our experience is segmented into discrete units, and that such segmentation can operate on shorter or longer timescales. Here, we describe a unification of how these dynamic physiological mechanisms of the hippocampus relate to ongoing externally and internally driven event segmentation, facilitating the demarcation of specific moments during experience. Our cross-species interdisciplinary approach offers a novel perspective in the way we construct and remember specific events, leading to the generation of many new hypotheses for future research.
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Affiliation(s)
- T W Ross
- Department of Psychology, Durham University, South Road, Durham, DH1 3LE, United Kingdom; Centre for Learning and Memory Processes, Durham University, United Kingdom.
| | - A Easton
- Department of Psychology, Durham University, South Road, Durham, DH1 3LE, United Kingdom; Centre for Learning and Memory Processes, Durham University, United Kingdom
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