1
|
Khazaei S, Parshi S, Alam S, Amin MR, Faghih RT. A multimodal dataset for investigating working memory in presence of music: a pilot study. Front Neurosci 2024; 18:1406814. [PMID: 38962177 PMCID: PMC11220373 DOI: 10.3389/fnins.2024.1406814] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2024] [Accepted: 05/30/2024] [Indexed: 07/05/2024] Open
Abstract
Introduction Decoding an individual's hidden brain states in responses to musical stimuli under various cognitive loads can unleash the potential of developing a non-invasive closed-loop brain-machine interface (CLBMI). To perform a pilot study and investigate the brain response in the context of CLBMI, we collect multimodal physiological signals and behavioral data within the working memory experiment in the presence of personalized musical stimuli. Methods Participants perform a working memory experiment called the n-back task in the presence of calming music and exciting music. Utilizing the skin conductance signal and behavioral data, we decode the brain's cognitive arousal and performance states, respectively. We determine the association of oxygenated hemoglobin (HbO) data with performance state. Furthermore, we evaluate the total hemoglobin (HbT) signal energy over each music session. Results A relatively low arousal variation was observed with respect to task difficulty, while the arousal baseline changes considerably with respect to the type of music. Overall, the performance index is enhanced within the exciting session. The highest positive correlation between the HbO concentration and performance was observed within the higher cognitive loads (3-back task) for all of the participants. Also, the HbT signal energy peak occurs within the exciting session. Discussion Findings may underline the potential of using music as an intervention to regulate the brain cognitive states. Additionally, the experiment provides a diverse array of data encompassing multiple physiological signals that can be used in the brain state decoder paradigm to shed light on the human-in-the-loop experiments and understand the network-level mechanisms of auditory stimulation.
Collapse
Affiliation(s)
- Saman Khazaei
- Department of Biomedical Engineering, New York University, New York, NY, United States
| | - Srinidhi Parshi
- Department of Electrical and Computer Engineering, University of Houston, Houston, TX, United States
| | - Samiul Alam
- Department of Electrical and Computer Engineering, University of Houston, Houston, TX, United States
| | - Md. Rafiul Amin
- Department of Electrical and Computer Engineering, University of Houston, Houston, TX, United States
| | - Rose T. Faghih
- Department of Biomedical Engineering, New York University, New York, NY, United States
- Department of Electrical and Computer Engineering, University of Houston, Houston, TX, United States
| |
Collapse
|
2
|
Akif A, Staib L, Herman P, Rothman DL, Yu Y, Hyder F. In vivo neuropil density from anatomical MRI and machine learning. Cereb Cortex 2024; 34:bhae200. [PMID: 38771239 PMCID: PMC11107380 DOI: 10.1093/cercor/bhae200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2024] [Revised: 04/23/2024] [Accepted: 04/28/2024] [Indexed: 05/22/2024] Open
Abstract
Brain energy budgets specify metabolic costs emerging from underlying mechanisms of cellular and synaptic activities. While current bottom-up energy budgets use prototypical values of cellular density and synaptic density, predicting metabolism from a person's individualized neuropil density would be ideal. We hypothesize that in vivo neuropil density can be derived from magnetic resonance imaging (MRI) data, consisting of longitudinal relaxation (T1) MRI for gray/white matter distinction and diffusion MRI for tissue cellularity (apparent diffusion coefficient, ADC) and axon directionality (fractional anisotropy, FA). We present a machine learning algorithm that predicts neuropil density from in vivo MRI scans, where ex vivo Merker staining and in vivo synaptic vesicle glycoprotein 2A Positron Emission Tomography (SV2A-PET) images were reference standards for cellular and synaptic density, respectively. We used Gaussian-smoothed T1/ADC/FA data from 10 healthy subjects to train an artificial neural network, subsequently used to predict cellular and synaptic density for 54 test subjects. While excellent histogram overlaps were observed both for synaptic density (0.93) and cellular density (0.85) maps across all subjects, the lower spatial correlations both for synaptic density (0.89) and cellular density (0.58) maps are suggestive of individualized predictions. This proof-of-concept artificial neural network may pave the way for individualized energy atlas prediction, enabling microscopic interpretations of functional neuroimaging data.
Collapse
Affiliation(s)
- Adil Akif
- Department of Biomedical Engineering, Yale University, 55 Prospect St, New Haven, CT 06511, United States
| | - Lawrence Staib
- Department of Biomedical Engineering, Yale University, 55 Prospect St, New Haven, CT 06511, United States
- Department of Radiology and Biomedical Imaging, Yale University, 300 Cedar St, New Haven, CT 06520, United States
- Department of Electrical Engineering, Yale University, 17 Hillhouse Ave, New Haven, CT 06511, United States
| | - Peter Herman
- Department of Radiology and Biomedical Imaging, Yale University, 300 Cedar St, New Haven, CT 06520, United States
- Magnetic Resonance Research Center, Yale University, 300 Cedar St, New Haven, CT 06520, United States
| | - Douglas L Rothman
- Department of Biomedical Engineering, Yale University, 55 Prospect St, New Haven, CT 06511, United States
- Department of Radiology and Biomedical Imaging, Yale University, 300 Cedar St, New Haven, CT 06520, United States
- Magnetic Resonance Research Center, Yale University, 300 Cedar St, New Haven, CT 06520, United States
| | - Yuguo Yu
- Research Institute of Intelligent and Complex Systems, State Key Laboratory of Medical Neurobiology and MOE Frontiers Center for Brain Science, Institute of Science and Technology for Brain-Inspired Intelligence, 220 Handen Road, Shanghai, 200032, China
| | - Fahmeed Hyder
- Department of Biomedical Engineering, Yale University, 55 Prospect St, New Haven, CT 06511, United States
- Department of Radiology and Biomedical Imaging, Yale University, 300 Cedar St, New Haven, CT 06520, United States
- Magnetic Resonance Research Center, Yale University, 300 Cedar St, New Haven, CT 06520, United States
| |
Collapse
|
3
|
Yang S, Jiao M, Xiang J, Fotedar N, Sun H, Liu F. Rejuvenating classical brain electrophysiology source localization methods with spatial graph Fourier filters for source extents estimation. Brain Inform 2024; 11:8. [PMID: 38472438 PMCID: PMC10933195 DOI: 10.1186/s40708-024-00221-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Accepted: 02/25/2024] [Indexed: 03/14/2024] Open
Abstract
EEG/MEG source imaging (ESI) aims to find the underlying brain sources to explain the observed EEG or MEG measurement. Multiple classical approaches have been proposed to solve the ESI problem based on different neurophysiological assumptions. To support clinical decision-making, it is important to estimate not only the exact location of the source signal but also the extended source activation regions. Existing methods may render over-diffuse or sparse solutions, which limit the source extent estimation accuracy. In this work, we leverage the graph structures defined in the 3D mesh of the brain and the spatial graph Fourier transform (GFT) to decompose the spatial graph structure into sub-spaces of low-, medium-, and high-frequency basis. We propose to use the low-frequency basis of spatial graph filters to approximate the extended areas of brain activation and embed the GFT into the classical ESI methods. We validated the classical source localization methods with the corresponding improved version using GFT in both synthetic data and real data. We found the proposed method can effectively reconstruct focal source patterns and significantly improve the performance compared to the classical algorithms.
Collapse
Affiliation(s)
- Shihao Yang
- School of Systems and Enterprises, Stevens Institute of Technology, Hoboken, NJ, 07030, USA
| | - Meng Jiao
- School of Systems and Enterprises, Stevens Institute of Technology, Hoboken, NJ, 07030, USA
| | - Jing Xiang
- MEG Center, Division of Neurology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, 45229, USA
| | - Neel Fotedar
- Epilepsy Center, Neurological Institute, University Hospitals Cleveland Medical Center, Cleveland, OH, 44106, USA
- Department of Neurology, Case Western Reserve University School of Medicine, Cleveland, OH, 44106, USA
| | - Hai Sun
- Department of Neurosurgery, Rutgers Robert Wood Johnson Medical School of Rutgers University, Brunswick, NJ, 08901, USA
| | - Feng Liu
- School of Systems and Enterprises, Stevens Institute of Technology, Hoboken, NJ, 07030, USA.
- Semcer Center for Healthcare Innovation, Stevens Institute of Technology, Hoboken, NJ, 07030, USA.
| |
Collapse
|
4
|
Silva Pereira S, Özer EE, Sebastian-Galles N. Complexity of STG signals and linguistic rhythm: a methodological study for EEG data. Cereb Cortex 2024; 34:bhad549. [PMID: 38236741 DOI: 10.1093/cercor/bhad549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Revised: 12/29/2023] [Accepted: 12/30/2023] [Indexed: 02/06/2024] Open
Abstract
The superior temporal and the Heschl's gyri of the human brain play a fundamental role in speech processing. Neurons synchronize their activity to the amplitude envelope of the speech signal to extract acoustic and linguistic features, a process known as neural tracking/entrainment. Electroencephalography has been extensively used in language-related research due to its high temporal resolution and reduced cost, but it does not allow for a precise source localization. Motivated by the lack of a unified methodology for the interpretation of source reconstructed signals, we propose a method based on modularity and signal complexity. The procedure was tested on data from an experiment in which we investigated the impact of native language on tracking to linguistic rhythms in two groups: English natives and Spanish natives. In the experiment, we found no effect of native language but an effect of language rhythm. Here, we compare source projected signals in the auditory areas of both hemispheres for the different conditions using nonparametric permutation tests, modularity, and a dynamical complexity measure. We found increasing values of complexity for decreased regularity in the stimuli, giving us the possibility to conclude that languages with less complex rhythms are easier to track by the auditory cortex.
Collapse
Affiliation(s)
- Silvana Silva Pereira
- Center for Brain and Cognition, Department of Information and Communications Technologies, Universitat Pompeu Fabra, 08005 Barcelona, Spain
| | - Ege Ekin Özer
- Center for Brain and Cognition, Department of Information and Communications Technologies, Universitat Pompeu Fabra, 08005 Barcelona, Spain
| | - Nuria Sebastian-Galles
- Center for Brain and Cognition, Department of Information and Communications Technologies, Universitat Pompeu Fabra, 08005 Barcelona, Spain
| |
Collapse
|
5
|
Giri A, Mosher JC, Adler A, Pantazis D. An F-ratio-based method for estimating the number of active sources in MEG. Front Hum Neurosci 2023; 17:1235192. [PMID: 37780957 PMCID: PMC10537939 DOI: 10.3389/fnhum.2023.1235192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Accepted: 08/22/2023] [Indexed: 10/03/2023] Open
Abstract
Introduction Magnetoencephalography (MEG) is a powerful technique for studying the human brain function. However, accurately estimating the number of sources that contribute to the MEG recordings remains a challenging problem due to the low signal-to-noise ratio (SNR), the presence of correlated sources, inaccuracies in head modeling, and variations in individual anatomy. Methods To address these issues, our study introduces a robust method for accurately estimating the number of active sources in the brain based on the F-ratio statistical approach, which allows for a comparison between a full model with a higher number of sources and a reduced model with fewer sources. Using this approach, we developed a formal statistical procedure that sequentially increases the number of sources in the multiple dipole localization problem until all sources are found. Results Our results revealed that the selection of thresholds plays a critical role in determining the method's overall performance, and appropriate thresholds needed to be adjusted for the number of sources and SNR levels, while they remained largely invariant to different inter-source correlations, translational modeling inaccuracies, and different cortical anatomies. By identifying optimal thresholds and validating our F-ratio-based method in simulated, real phantom, and human MEG data, we demonstrated the superiority of our F-ratio-based method over existing state-of-the-art statistical approaches, such as the Akaike Information Criterion (AIC) and Minimum Description Length (MDL). Discussion Overall, when tuned for optimal selection of thresholds, our method offers researchers a precise tool to estimate the true number of active brain sources and accurately model brain function.
Collapse
Affiliation(s)
- Amita Giri
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, United States
| | - John C. Mosher
- Department of Neurology, McGovern Medical School, Texas Institute for Restorative Neurotechnologies, UTHealth, Houston, TX, United States
| | - Amir Adler
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, United States
- Department of Electrical Engineering, Braude College of Engineering, Karmiel, Israel
| | - Dimitrios Pantazis
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, United States
| |
Collapse
|
6
|
Annen J, Frasso G, van der Lande GJM, Bonin EAC, Vitello MM, Panda R, Sala A, Cavaliere C, Raimondo F, Bahri MA, Schiff ND, Gosseries O, Thibaut A, Laureys S. Cerebral electrometabolic coupling in disordered and normal states of consciousness. Cell Rep 2023; 42:112854. [PMID: 37498745 DOI: 10.1016/j.celrep.2023.112854] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Revised: 06/02/2023] [Accepted: 07/08/2023] [Indexed: 07/29/2023] Open
Abstract
We assess cerebral integrity with cortical and subcortical FDG-PET and cortical electroencephalography (EEG) within the mesocircuit model framework in patients with disorders of consciousness (DoCs). The mesocircuit hypothesis proposes that subcortical activation facilitates cortical function. We find that the metabolic balance of subcortical mesocircuit areas is informative for diagnosis and is associated with four EEG-based power spectral density patterns, cortical metabolism, and α power in healthy controls and patients with a DoC. Last, regional electrometabolic coupling at the cortical level can be identified in the θ and α ranges, showing positive and negative relations with glucose uptake, respectively. This relation is inverted in patients with a DoC, potentially related to altered orchestration of neural activity, and may underlie suboptimal excitability states in patients with a DoC. By understanding the neurobiological basis of the pathophysiology underlying DoCs, we foresee translational value for diagnosis and treatment of patients with a DoC.
Collapse
Affiliation(s)
- Jitka Annen
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Centre du Cerveau(2), University Hospital of Liège, Liège, Belgium.
| | | | - Glenn J M van der Lande
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Centre du Cerveau(2), University Hospital of Liège, Liège, Belgium
| | - Estelle A C Bonin
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Centre du Cerveau(2), University Hospital of Liège, Liège, Belgium
| | - Marie M Vitello
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Centre du Cerveau(2), University Hospital of Liège, Liège, Belgium
| | - Rajanikant Panda
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Centre du Cerveau(2), University Hospital of Liège, Liège, Belgium
| | - Arianna Sala
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Centre du Cerveau(2), University Hospital of Liège, Liège, Belgium
| | | | - Federico Raimondo
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Institute of Neuroscience and Medicine, Brain & Behaviour (INM-7), Research Centre Jülich, Jülich, Germany
| | - Mohamed Ali Bahri
- GIGA-Cyclotron Research Centre-In Vivo Imaging, University of Liège, Liège, Belgium
| | | | - Olivia Gosseries
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Centre du Cerveau(2), University Hospital of Liège, Liège, Belgium
| | - Aurore Thibaut
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Centre du Cerveau(2), University Hospital of Liège, Liège, Belgium
| | - Steven Laureys
- Coma Science Group, GIGA-Consciousness, University of Liège, Liège, Belgium; Centre du Cerveau(2), University Hospital of Liège, Liège, Belgium; Joint International Research Unit on Consciousness, CERVO Brain Research Centre, University Laval, Quebec City, QC, Canada
| |
Collapse
|
7
|
Zheng L, Liao P, Wu X, Cao M, Cui W, Lu L, Xu H, Zhu L, Lyu B, Wang X, Teng P, Wang J, Vogrin S, Plummer C, Luan G, Gao JH. An artificial intelligence-based pipeline for automated detection and localisation of epileptic sources from magnetoencephalography. J Neural Eng 2023; 20:046036. [PMID: 37615416 DOI: 10.1088/1741-2552/acef92] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 08/10/2023] [Indexed: 08/25/2023]
Abstract
Objective.Magnetoencephalography (MEG) is a powerful non-invasive diagnostic modality for presurgical epilepsy evaluation. However, the clinical utility of MEG mapping for localising epileptic foci is limited by its low efficiency, high labour requirements, and considerable interoperator variability. To address these obstacles, we proposed a novel artificial intelligence-based automated magnetic source imaging (AMSI) pipeline for automated detection and localisation of epileptic sources from MEG data.Approach.To expedite the analysis of clinical MEG data from patients with epilepsy and reduce human bias, we developed an autolabelling method, a deep-learning model based on convolutional neural networks and a hierarchical clustering method based on a perceptual hash algorithm, to enable the coregistration of MEG and magnetic resonance imaging, the detection and clustering of epileptic activity, and the localisation of epileptic sources in a highly automated manner. We tested the capability of the AMSI pipeline by assessing MEG data from 48 epilepsy patients.Main results.The AMSI pipeline was able to rapidly detect interictal epileptiform discharges with 93.31% ± 3.87% precision based on a 35-patient dataset (with sevenfold patientwise cross-validation) and robustly rendered accurate localisation of epileptic activity with a lobar concordance of 87.18% against interictal and ictal stereo-electroencephalography findings in a 13-patient dataset. We also showed that the AMSI pipeline accomplishes the necessary processes and delivers objective results within a much shorter time frame (∼12 min) than traditional manual processes (∼4 h).Significance.The AMSI pipeline promises to facilitate increased utilisation of MEG data in the clinical analysis of patients with epilepsy.
Collapse
Affiliation(s)
- Li Zheng
- Beijing City Key Laboratory of Medical Physics and Engineering, Institution of Heavy Ion Physics, School of Physics, Peking University, Beijing, People's Republic of China
- Changping Laboratory, Beijing, People's Republic of China
| | - Pan Liao
- Center for MRI Research, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, People's Republic of China
| | - Xiuwen Wu
- Changping Laboratory, Beijing, People's Republic of China
- Center for Biomedical Engineering, University of Science and Technology of China, Anhui, People's Republic of China
| | - Miao Cao
- Beijing City Key Laboratory of Medical Physics and Engineering, Institution of Heavy Ion Physics, School of Physics, Peking University, Beijing, People's Republic of China
- Changping Laboratory, Beijing, People's Republic of China
| | - Wei Cui
- Center for Biomedical Engineering, University of Science and Technology of China, Anhui, People's Republic of China
| | - Lingxi Lu
- Center for the Cognitive Science of Language, Beijing Language and Culture University, Beijing, People's Republic of China
| | - Hui Xu
- Beijing City Key Laboratory of Medical Physics and Engineering, Institution of Heavy Ion Physics, School of Physics, Peking University, Beijing, People's Republic of China
| | - Linlin Zhu
- Beijing City Key Laboratory of Medical Physics and Engineering, Institution of Heavy Ion Physics, School of Physics, Peking University, Beijing, People's Republic of China
| | - Bingjiang Lyu
- Changping Laboratory, Beijing, People's Republic of China
| | - Xiongfei Wang
- Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, People's Republic of China
- Beijing Key Laboratory of Epilepsy, Capital Medical University, Beijing, People's Republic of China
| | - Pengfei Teng
- Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, People's Republic of China
| | - Jing Wang
- Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, People's Republic of China
| | - Simon Vogrin
- Department of Neuroimaging, Swinburne University of Technology, Melbourne, Australia
| | - Chris Plummer
- Department of Neuroimaging, Swinburne University of Technology, Melbourne, Australia
| | - Guoming Luan
- Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, People's Republic of China
- Beijing Key Laboratory of Epilepsy, Capital Medical University, Beijing, People's Republic of China
| | - Jia-Hong Gao
- Beijing City Key Laboratory of Medical Physics and Engineering, Institution of Heavy Ion Physics, School of Physics, Peking University, Beijing, People's Republic of China
- Changping Laboratory, Beijing, People's Republic of China
- Center for MRI Research, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, People's Republic of China
- McGovern Institute for Brain Research, Peking University, Beijing, People's Republic of China
- National Biomedical Imaging Center, Peking University, Beijing, People's Republic of China
| |
Collapse
|
8
|
Axelrod V, Rozier C, Lehongre K, Adam C, Lambrecq V, Navarro V, Naccache L. Neural modulations in the auditory cortex during internal and external attention tasks: A single-patient intracranial recording study. Cortex 2022; 157:211-230. [PMID: 36335821 DOI: 10.1016/j.cortex.2022.09.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2021] [Revised: 05/12/2022] [Accepted: 09/27/2022] [Indexed: 12/15/2022]
Abstract
Brain sensory processing is not passive, but is rather modulated by our internal state. Different research methods such as non-invasive imaging methods and intracranial recording of the local field potential (LFP) have been used to study to what extent sensory processing and the auditory cortex in particular are modulated by selective attention. However, at the level of the single- or multi-units the selective attention in humans has not been tested. In addition, most previous research on selective attention has explored externally-oriented attention, but attention can be also directed inward (i.e., internal attention), like spontaneous self-generated thoughts and mind-wandering. In the present study we had a rare opportunity to record multi-unit activity (MUA) in the auditory cortex of a patient. To complement, we also analyzed the LFP signal of the macro-contact in the auditory cortex. Our experiment consisted of two conditions with periodic beeping sounds. The participants were asked either to count the beeps (i.e., an "external attention" condition) or to recall the events of the previous day (i.e., an "internal attention" condition). We found that the four out of seven recorded units in the auditory cortex showed increased firing rates in "external attention" compared to "internal attention" condition. The beginning of this attentional modulation varied across multi-units between 30-50 msec and 130-150 msec from stimulus onset, a result that is compatible with an early selection view. The LFP evoked potential and induced high gamma activity both showed attentional modulation starting at about 70-80 msec. As the control, for the same experiment we recorded MUA activity in the amygdala and hippocampus of two additional patients. No major attentional modulation was found in the control regions. Overall, we believe that our results provide new empirical information and support for existing theoretical views on selective attention and spontaneous self-generated cognition.
Collapse
Affiliation(s)
- Vadim Axelrod
- The Gonda Multidisciplinary Brain Research Center, Bar Ilan University, Ramat Gan, Israel.
| | - Camille Rozier
- Sorbonne Université, Institut du Cerveau - Paris Brain Institute, ICM, INSERM U1127, CNRS UMR 7225, Paris, France
| | - Katia Lehongre
- Sorbonne Université, Institut du Cerveau - Paris Brain Institute, ICM, INSERM U1127, CNRS UMR 7225, Paris, France; Centre de NeuroImagerie de Recherche-CENIR, Paris Brain Institute, UMRS 1127, CNRS UMR 7225, Pitié-Salpêtriere Hospital, Paris, France
| | - Claude Adam
- AP-HP, GH Pitie-Salpêtrière-Charles Foix, Epilepsy Unit, Neurology Department, Paris, France
| | - Virginie Lambrecq
- Sorbonne Université, Institut du Cerveau - Paris Brain Institute, ICM, INSERM U1127, CNRS UMR 7225, Paris, France; AP-HP, Groupe hospitalier Pitié-Salpêtrière, Department of Neurophysiology, Paris, France; Sorbonne Université, UMR S1127, Paris, France
| | - Vincent Navarro
- Sorbonne Université, Institut du Cerveau - Paris Brain Institute, ICM, INSERM U1127, CNRS UMR 7225, Paris, France; AP-HP, GH Pitie-Salpêtrière-Charles Foix, Epilepsy Unit, Neurology Department, Paris, France; Sorbonne Université, UMR S1127, Paris, France
| | - Lionel Naccache
- Sorbonne Université, Institut du Cerveau - Paris Brain Institute, ICM, INSERM U1127, CNRS UMR 7225, Paris, France; AP-HP, Groupe hospitalier Pitié-Salpêtrière, Department of Neurophysiology, Paris, France
| |
Collapse
|
9
|
Seok SC, McDevitt E, Mednick SC, Malerba P. Global and non-Global slow oscillations differentiate in their depth profiles. FRONTIERS IN NETWORK PHYSIOLOGY 2022; 2:947618. [PMID: 36926094 PMCID: PMC10013040 DOI: 10.3389/fnetp.2022.947618] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 10/10/2022] [Indexed: 03/18/2023]
Abstract
Sleep slow oscillations (SOs, 0.5-1.5 Hz) are thought to organize activity across cortical and subcortical structures, leading to selective synaptic changes that mediate consolidation of recent memories. Currently, the specific mechanism that allows for this selectively coherent activation across brain regions is not understood. Our previous research has shown that SOs can be classified on the scalp as Global, Local or Frontal, where Global SOs are found in most electrodes within a short time delay and gate long-range information flow during NREM sleep. The functional significance of space-time profiles of SOs hinges on testing if these differential SOs scalp profiles are mirrored by differential depth structure of SOs in the brain. In this study, we built an analytical framework to allow for the characterization of SO depth profiles in space-time across cortical and sub-cortical regions. To test if the two SO types could be differentiated in their cortical-subcortical activity, we trained 30 machine learning classification algorithms to distinguish Global and non-Global SOs within each individual, and repeated this analysis for light (Stage 2, S2) and deep (slow wave sleep, SWS) NREM stages separately. Multiple algorithms reached high performance across all participants, in particular algorithms based on k-nearest neighbors classification principles. Univariate feature ranking and selection showed that the most differentiating features for Global vs. non-Global SOs appeared around the trough of the SO, and in regions including cortex, thalamus, caudate nucleus, and brainstem. Results also indicated that differentiation during S2 required an extended network of current from cortical-subcortical regions, including all regions found in SWS and other basal ganglia regions, and amygdala and hippocampus, suggesting a potential functional differentiation in the role of Global SOs in S2 vs. SWS. We interpret our results as supporting the potential functional difference of Global and non-Global SOs in sleep dynamics.
Collapse
Affiliation(s)
- Sang-Cheol Seok
- Battelle Center for Mathematical Medicine, Nationwide Children’s Hospital, Columbus, OH, United States
| | | | - Sara C. Mednick
- Department of Cognitive Sciences, University of California, Irvine, Irvine, CA, United States
| | - Paola Malerba
- Battelle Center for Mathematical Medicine, Nationwide Children’s Hospital, Columbus, OH, United States
- Center for Biobehavioral Health, Abigail Wexner Research Institute, Nationwide Children’s Hospital, Columbus, OH, United States
- School of Medicine, The Ohio State University, Columbus, OH, United States
| |
Collapse
|
10
|
Tok S, Ahnaou A, Drinkenburg W. Functional Neurophysiological Biomarkers of Early-Stage Alzheimer's Disease: A Perspective of Network Hyperexcitability in Disease Progression. J Alzheimers Dis 2021; 88:809-836. [PMID: 34420957 PMCID: PMC9484128 DOI: 10.3233/jad-210397] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Network hyperexcitability (NH) has recently been suggested as a potential neurophysiological indicator of Alzheimer’s disease (AD), as new, more accurate biomarkers of AD are sought. NH has generated interest as a potential indicator of certain stages in the disease trajectory and even as a disease mechanism by which network dysfunction could be modulated. NH has been demonstrated in several animal models of AD pathology and multiple lines of evidence point to the existence of NH in patients with AD, strongly supporting the physiological and clinical relevance of this readout. Several hypotheses have been put forward to explain the prevalence of NH in animal models through neurophysiological, biochemical, and imaging techniques. However, some of these hypotheses have been built on animal models with limitations and caveats that may have derived NH through other mechanisms or mechanisms without translational validity to sporadic AD patients, potentially leading to an erroneous conclusion of the underlying cause of NH occurring in patients with AD. In this review, we discuss the substantiation for NH in animal models of AD pathology and in human patients, as well as some of the hypotheses considering recently developed animal models that challenge existing hypotheses and mechanisms of NH. In addition, we provide a preclinical perspective on how the development of animal models incorporating AD-specific NH could provide physiologically relevant translational experimental data that may potentially aid the discovery and development of novel therapies for AD.
Collapse
Affiliation(s)
- Sean Tok
- Department of Neuroscience, Janssen Research & Development, Janssen Pharmaceutica NV, Beerse, Belgium.,Groningen Institute for Evolutionary Life Sciences, Faculty of Science and Engineering, University of Groningen, The Netherlands
| | - Abdallah Ahnaou
- Department of Neuroscience, Janssen Research & Development, Janssen Pharmaceutica NV, Beerse, Belgium
| | - Wilhelmus Drinkenburg
- Department of Neuroscience, Janssen Research & Development, Janssen Pharmaceutica NV, Beerse, Belgium.,Groningen Institute for Evolutionary Life Sciences, Faculty of Science and Engineering, University of Groningen, The Netherlands
| |
Collapse
|
11
|
Liu C, Kang Y, Zhang L, Zhang J. Rapidly Decoding Image Categories From MEG Data Using a Multivariate Short-Time FC Pattern Analysis Approach. IEEE J Biomed Health Inform 2021; 25:1139-1150. [PMID: 32750957 DOI: 10.1109/jbhi.2020.3008731] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Recent advances in the development of multivariate analysis methods have led to the application of multivariate pattern analysis (MVPA) to investigate the interactions between brain regions using graph theory (functional connectivity, FC) and decode visual categories from functional magnetic resonance imaging (fMRI) data from a continuous multicategory paradigm. To estimate stable FC patterns from fMRI data, previous studies required long periods in the order of several minutes, in comparison to the human brain that categories visual stimuli within hundreds of milliseconds. Constructing short-time dynamic FC patterns in the order of milliseconds and decoding visual categories is a relatively novel concept. In this study, we developed a multivariate decoding algorithm based on FC patterns and applied it to magnetoencephalography (MEG) data. MEG data were recorded from participants presented with image stimuli in four categories (faces, scenes, animals and tools). MEG data from 17 participants demonstrate that short-time dynamic FC patterns yield brain activity patterns that can be used to decode visual categories with high accuracy. Our results show that FC patterns change over the time window, and FC patterns extracted in the time window of 0∼200 ms after the stimulus onset were most stable. Further, the categorizing accuracy peaked (the mean binary accuracy is above 78.6% at individual level) in the FC patterns estimated within the 0∼200 ms interval. These findings elucidate the underlying connectivity information during visual category processing on a relatively smaller time scale and demonstrate that the contribution of FC patterns to categorization fluctuates over time.
Collapse
|
12
|
Rosjat N, Wang BA, Liu L, Fink GR, Daun S. Stimulus transformation into motor action: Dynamic graph analysis reveals a posterior-to-anterior shift in brain network communication of older subjects. Hum Brain Mapp 2021; 42:1547-1563. [PMID: 33305871 PMCID: PMC7927305 DOI: 10.1002/hbm.25313] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Revised: 09/11/2020] [Accepted: 11/29/2020] [Indexed: 11/08/2022] Open
Abstract
Cognitive performance slows down with increasing age. This includes cognitive processes that are essential for the performance of a motor act, such as the slowing down in response to an external stimulus. The objective of this study was to identify aging-associated functional changes in the brain networks that are involved in the transformation of external stimuli into motor action. To investigate this topic, we employed dynamic graphs based on phase-locking of Electroencephalography signals recorded from healthy younger and older subjects while performing a simple visually-cued finger-tapping task. The network analysis yielded specific age-related network structures varying in time in the low frequencies (2-7 Hz), which are closely connected to stimulus processing, movement initiation and execution in both age groups. The networks in older subjects, however, contained several additional, particularly interhemispheric, connections and showed an overall increased coupling density. Cluster analyses revealed reduced variability of the subnetworks in older subjects, particularly during movement preparation. In younger subjects, occipital, parietal, sensorimotor and central regions were-temporally arranged in this order-heavily involved in hub nodes. Whereas in older subjects, a hub in frontal regions preceded the noticeably delayed occurrence of sensorimotor hubs, indicating different neural information processing in older subjects. All observed changes in brain network organization, which are based on neural synchronization in the low frequencies, provide a possible neural mechanism underlying previous fMRI data, which report an overactivation, especially in the prefrontal and pre-motor areas, associated with a loss of hemispheric lateralization in older subjects.
Collapse
Affiliation(s)
- Nils Rosjat
- Cognitive Neuroscience, Institute of Neuroscience and Medicine (INM‐3)JülichGermany
- Institute of Zoology, University of CologneCologneGermany
| | - Bin A. Wang
- Cognitive Neuroscience, Institute of Neuroscience and Medicine (INM‐3)JülichGermany
- Department of NeurologyBG University Hospital BergmannsheilBochumGermany
| | - Liqing Liu
- Cognitive Neuroscience, Institute of Neuroscience and Medicine (INM‐3)JülichGermany
- Institute of Zoology, University of CologneCologneGermany
- Faculty of Psychology, Key Research Base of Humanities and Social Sciences of Ministry of EducationTianjin Normal UniversityTianjinChina
| | - Gereon R. Fink
- Cognitive Neuroscience, Institute of Neuroscience and Medicine (INM‐3)JülichGermany
- Department of NeurologyFaculty of Medicine and University Hospital Cologne, University of CologneCologneGermany
| | - Silvia Daun
- Cognitive Neuroscience, Institute of Neuroscience and Medicine (INM‐3)JülichGermany
- Department of NeurologyFaculty of Medicine and University Hospital Cologne, University of CologneCologneGermany
| |
Collapse
|
13
|
Piastra MC, Nüßing A, Vorwerk J, Clerc M, Engwer C, Wolters CH. A comprehensive study on electroencephalography and magnetoencephalography sensitivity to cortical and subcortical sources. Hum Brain Mapp 2021; 42:978-992. [PMID: 33156569 PMCID: PMC7856654 DOI: 10.1002/hbm.25272] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Revised: 10/19/2020] [Accepted: 10/21/2020] [Indexed: 12/31/2022] Open
Abstract
Signal-to-noise ratio (SNR) maps are a good way to visualize electroencephalography (EEG) and magnetoencephalography (MEG) sensitivity. SNR maps extend the knowledge about the modulation of EEG and MEG signals by source locations and orientations and can therefore help to better understand and interpret measured signals as well as source reconstruction results thereof. Our work has two main objectives. First, we investigated the accuracy and reliability of EEG and MEG finite element method (FEM)-based sensitivity maps for three different head models, namely an isotropic three and four-compartment and an anisotropic six-compartment head model. As a result, we found that ignoring the cerebrospinal fluid leads to an overestimation of EEG SNR values. Second, we examined and compared EEG and MEG SNR mappings for both cortical and subcortical sources and their modulation by source location and orientation. Our results for cortical sources show that EEG sensitivity is higher for radial and deep sources and MEG for tangential ones, which are the majority of sources. As to the subcortical sources, we found that deep sources with sufficient tangential source orientation are recordable by the MEG. Our work, which represents the first comprehensive study where cortical and subcortical sources are considered in highly detailed FEM-based EEG and MEG SNR mappings, sheds a new light on the sensitivity of EEG and MEG and might influence the decision of brain researchers or clinicians in their choice of the best modality for their experiment or diagnostics, respectively.
Collapse
Affiliation(s)
- Maria Carla Piastra
- Institute for Biomagnetism and BiosignalanalysisUniversity of MünsterMünsterGermany
- Institute for Computational and Applied MathematicsUniversity of MünsterMünsterGermany
- Cognitive Neuroscience, Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen Medical CenterNijmegenThe Netherlands
| | - Andreas Nüßing
- Institute for Biomagnetism and BiosignalanalysisUniversity of MünsterMünsterGermany
- Institute for Computational and Applied MathematicsUniversity of MünsterMünsterGermany
| | - Johannes Vorwerk
- Institute of Electrical and Biomedical Engineering, University for Health SciencesMedical Informatics and TechnologyHall in TirolAustria
| | - Maureen Clerc
- Inria Sophia Antipolis‐MediterranéeBiotFrance
- Université Côte d'AzurNiceFrance
| | - Christian Engwer
- Institute for Computational and Applied MathematicsUniversity of MünsterMünsterGermany
- Cluster of Excellence EXC 1003, Cells in Motion, CiM, University of MünsterMünsterGermany
| | - Carsten H. Wolters
- Institute for Biomagnetism and BiosignalanalysisUniversity of MünsterMünsterGermany
- Otto Creutzfeldt Center for Cognitive and Behavioral Neuroscience, University of MünsterMünsterGermany
| |
Collapse
|
14
|
van Bree S, Sohoglu E, Davis MH, Zoefel B. Sustained neural rhythms reveal endogenous oscillations supporting speech perception. PLoS Biol 2021; 19:e3001142. [PMID: 33635855 PMCID: PMC7946281 DOI: 10.1371/journal.pbio.3001142] [Citation(s) in RCA: 47] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2020] [Revised: 03/10/2021] [Accepted: 02/08/2021] [Indexed: 12/23/2022] Open
Abstract
Rhythmic sensory or electrical stimulation will produce rhythmic brain responses. These rhythmic responses are often interpreted as endogenous neural oscillations aligned (or "entrained") to the stimulus rhythm. However, stimulus-aligned brain responses can also be explained as a sequence of evoked responses, which only appear regular due to the rhythmicity of the stimulus, without necessarily involving underlying neural oscillations. To distinguish evoked responses from true oscillatory activity, we tested whether rhythmic stimulation produces oscillatory responses which continue after the end of the stimulus. Such sustained effects provide evidence for true involvement of neural oscillations. In Experiment 1, we found that rhythmic intelligible, but not unintelligible speech produces oscillatory responses in magnetoencephalography (MEG) which outlast the stimulus at parietal sensors. In Experiment 2, we found that transcranial alternating current stimulation (tACS) leads to rhythmic fluctuations in speech perception outcomes after the end of electrical stimulation. We further report that the phase relation between electroencephalography (EEG) responses and rhythmic intelligible speech can predict the tACS phase that leads to most accurate speech perception. Together, we provide fundamental results for several lines of research-including neural entrainment and tACS-and reveal endogenous neural oscillations as a key underlying principle for speech perception.
Collapse
Affiliation(s)
- Sander van Bree
- MRC Cognition and Brain Sciences Unit, University of Cambridge, Cambridge, United Kingdom
- Centre for Cognitive Neuroimaging, University of Glasgow, Glasgow, United Kingdom
- School of Psychology and Centre for Human Brain Health, University of Birmingham, Birmingham, United Kingdom
| | - Ediz Sohoglu
- MRC Cognition and Brain Sciences Unit, University of Cambridge, Cambridge, United Kingdom
- School of Psychology, University of Sussex, Brighton, United Kingdom
| | - Matthew H. Davis
- MRC Cognition and Brain Sciences Unit, University of Cambridge, Cambridge, United Kingdom
| | - Benedikt Zoefel
- MRC Cognition and Brain Sciences Unit, University of Cambridge, Cambridge, United Kingdom
- Centre de Recherche Cerveau et Cognition, CNRS, Toulouse, France
- Université Toulouse III Paul Sabatier, Toulouse, France
| |
Collapse
|
15
|
Monin MY, Rahmouni L, Merlini A, Andriulli FP. A Hybrid Volume-Surface-Wire Integral Equation for the Anisotropic Forward Problem in Electroencephalography. ACTA ACUST UNITED AC 2020. [DOI: 10.1109/jerm.2020.2966121] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
|
16
|
Haumann NT, Hansen B, Huotilainen M, Vuust P, Brattico E. Applying stochastic spike train theory for high-accuracy human MEG/EEG. J Neurosci Methods 2020; 340:108743. [DOI: 10.1016/j.jneumeth.2020.108743] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Revised: 04/14/2020] [Accepted: 04/14/2020] [Indexed: 11/16/2022]
|
17
|
Yang C, Wu W, Nie Y, Wang Q, Ren J. EasyMEG: An easy-to-use toolbox for MEG analysis. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2020; 186:105199. [PMID: 31743827 DOI: 10.1016/j.cmpb.2019.105199] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Revised: 10/28/2019] [Accepted: 11/11/2019] [Indexed: 06/10/2023]
Abstract
BACKGROUND AND OBJECTIVE Magnetoencephalography (MEG) is an advanced magnetic source imaging technology that measures the magnetic fields produced by neural activities. It has been extensively used in scientific research and clinical diagnosis due to its high temporal and spatial resolution. Considering the special nature of MEG data, it needs to perform a series of processes and analysis to obtain valuable information. Therefore, the identification of data processing is a key point of MEG studies. At present, the software for MEG analysis such as FieldTrip has no Graphic User Interface (GUI) and users must write their own script to perform concrete analysis. It brings the difficulties to researchers like the doctors without experience in programming or newcomers to MEG. Thus, an open-sourced software-EasyMEG was developed. It has friendly interface with highly functions-integration. METHODS The functions of EasyMEG are developed based on MATLAB language to ensure the consistency of the user interface under different operating systems. EasyMEG is a highly integrated software that contains a set of functions for preprocessing, time-lock analysis, time-frequency analysis, source analysis, and plotting. EasyMEG provides a friendly GUI and allows users to complete analyses through a simple and clean interface. RESULTS This toolbox has been released as an open-source software on GitHub under the GNU General Public License: https://tonywu2018.github.io/EasyMEG/. CONCLUSIONS We hope to improve this toolbox by the power of community and wish to make EasyMEG a simple and powerful toolbox for further MEG studies.
Collapse
Affiliation(s)
- Chunlan Yang
- College of Life Science and Bioengineering, Beijing University of Technology, Beijing, China.
| | - Wenxiao Wu
- College of Life Science and Bioengineering, Beijing University of Technology, Beijing, China
| | - Yingnan Nie
- College of Life Science and Bioengineering, Beijing University of Technology, Beijing, China
| | - Qun Wang
- Beijing Tian Tan Hospital, Capital Medical University, Beijing, China
| | - Jiechuan Ren
- Beijing Tian Tan Hospital, Capital Medical University, Beijing, China
| |
Collapse
|
18
|
Jatoi MA, Kamel N, Musavi SHA, López JD. Bayesian Algorithm Based Localization of EEG Recorded Electromagnetic Brain Activity. Curr Med Imaging 2020; 15:184-193. [PMID: 31975664 DOI: 10.2174/1573405613666170629112918] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2017] [Revised: 06/09/2017] [Accepted: 06/13/2017] [Indexed: 11/22/2022]
Abstract
BACKGROUND Electrical signals are generated inside human brain due to any mental or physical task. This causes activation of several sources inside brain which are localized using various optimization algorithms. METHODS Such activity is recorded through various neuroimaging techniques like fMRI, EEG, MEG etc. EEG signals based localization is termed as EEG source localization. The source localization problem is defined by two complementary problems; the forward problem and the inverse problem. The forward problem involves the modeling how the electromagnetic sources cause measurement in sensor space, while the inverse problem refers to the estimation of the sources (causes) from observed data (consequences). Usually, this inverse problem is ill-posed. In other words, there are many solutions to the inverse problem that explains the same data. This ill-posed problem can be finessed by using prior information within a Bayesian framework. This research work discusses source reconstruction for EEG data using a Bayesian framework. In particular, MSP, LORETA and MNE are compared. RESULTS The results are compared in terms of variational free energy approximation to model evidence and in terms of variance accounted for in the sensor space. The results are taken for real time EEG data and synthetically generated EEG data at an SNR level of 10dB. CONCLUSION In brief, it was seen that MSP has the highest evidence and lowest localization error when compared to classical models. Furthermore, the plausibility and consistency of the source reconstruction speaks to the ability of MSP technique to localize active brain sources.
Collapse
Affiliation(s)
- Munsif Ali Jatoi
- Faculty of Engineering, Science and Technology, Indus University, Karachi, Sindh, Pakistan
| | - Nidal Kamel
- Department of Electrical and Electronic Engineering, Center for Intelligent Signal and Imaging Research, Universiti Teknologi PETRONAS, Perak, Malaysia
| | | | - José David López
- Sistemic Faculty of Engineering, University of Antioquia, UDEA, Medellin, Colombia
| |
Collapse
|
19
|
Antonelli L, Guarracino MR, Maddalena L, Sangiovanni M. Integrating imaging and omics data: A review. Biomed Signal Process Control 2019. [DOI: 10.1016/j.bspc.2019.04.032] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
|
20
|
Hajizadeh A, Matysiak A, May PJC, König R. Explaining event-related fields by a mechanistic model encapsulating the anatomical structure of auditory cortex. BIOLOGICAL CYBERNETICS 2019; 113:321-345. [PMID: 30820663 PMCID: PMC6510841 DOI: 10.1007/s00422-019-00795-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Accepted: 02/08/2019] [Indexed: 06/09/2023]
Abstract
Event-related fields of the magnetoencephalogram are triggered by sensory stimuli and appear as a series of waves extending hundreds of milliseconds after stimulus onset. They reflect the processing of the stimulus in cortex and have a highly subject-specific morphology. However, we still have an incomplete picture of how event-related fields are generated, what the various waves signify, and why they are so subject-specific. Here, we focus on this problem through the lens of a computational model which describes auditory cortex in terms of interconnected cortical columns as part of hierarchically placed fields of the core, belt, and parabelt areas. We develop an analytical approach arriving at solutions to the system dynamics in terms of normal modes: damped harmonic oscillators emerging out of the coupled excitation and inhibition in the system. Each normal mode is a global feature which depends on the anatomical structure of the entire auditory cortex. Further, normal modes are fundamental dynamical building blocks, in that the activity of each cortical column represents a combination of all normal modes. This approach allows us to replicate a typical auditory event-related response as a weighted sum of the single-column activities. Our work offers an alternative to the view that the event-related field arises out of spatially discrete, local generators. Rather, there is only a single generator process distributed over the entire network of the auditory cortex. We present predictions for testing to what degree subject-specificity is due to cross-subject variations in dynamical parameters rather than in the cortical surface morphology.
Collapse
Affiliation(s)
- Aida Hajizadeh
- Special Lab Non-invasive Brain Imaging, Leibniz Institute for Neurobiology, Brenneckestraße 6, 39118 Magdeburg, Germany
| | - Artur Matysiak
- Special Lab Non-invasive Brain Imaging, Leibniz Institute for Neurobiology, Brenneckestraße 6, 39118 Magdeburg, Germany
| | - Patrick J. C. May
- Department of Psychology, Lancaster University, Lancaster, LA1 4YF UK
- Special Lab Non-invasive Brain Imaging, Leibniz Institute for Neurobiology, Brenneckestraße 6, 39118 Magdeburg, Germany
| | - Reinhard König
- Special Lab Non-invasive Brain Imaging, Leibniz Institute for Neurobiology, Brenneckestraße 6, 39118 Magdeburg, Germany
| |
Collapse
|
21
|
Fan X, Markram H. A Brief History of Simulation Neuroscience. Front Neuroinform 2019; 13:32. [PMID: 31133838 PMCID: PMC6513977 DOI: 10.3389/fninf.2019.00032] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2019] [Accepted: 04/12/2019] [Indexed: 12/19/2022] Open
Abstract
Our knowledge of the brain has evolved over millennia in philosophical, experimental and theoretical phases. We suggest that the next phase is simulation neuroscience. The main drivers of simulation neuroscience are big data generated at multiple levels of brain organization and the need to integrate these data to trace the causal chain of interactions within and across all these levels. Simulation neuroscience is currently the only methodology for systematically approaching the multiscale brain. In this review, we attempt to reconstruct the deep historical paths leading to simulation neuroscience, from the first observations of the nerve cell to modern efforts to digitally reconstruct and simulate the brain. Neuroscience began with the identification of the neuron as the fundamental unit of brain structure and function and has evolved towards understanding the role of each cell type in the brain, how brain cells are connected to each other, and how the seemingly infinite networks they form give rise to the vast diversity of brain functions. Neuronal mapping is evolving from subjective descriptions of cell types towards objective classes, subclasses and types. Connectivity mapping is evolving from loose topographic maps between brain regions towards dense anatomical and physiological maps of connections between individual genetically distinct neurons. Functional mapping is evolving from psychological and behavioral stereotypes towards a map of behaviors emerging from structural and functional connectomes. We show how industrialization of neuroscience and the resulting large disconnected datasets are generating demand for integrative neuroscience, how the scale of neuronal and connectivity maps is driving digital atlasing and digital reconstruction to piece together the multiple levels of brain organization, and how the complexity of the interactions between molecules, neurons, microcircuits and brain regions is driving brain simulation to understand the interactions in the multiscale brain.
Collapse
Affiliation(s)
- Xue Fan
- Blue Brain Project, École Polytechnique Fédérale de Lausanne (EPFL), Geneva, Switzerland
| | | |
Collapse
|
22
|
McMackin R, Bede P, Pender N, Hardiman O, Nasseroleslami B. Neurophysiological markers of network dysfunction in neurodegenerative diseases. Neuroimage Clin 2019; 22:101706. [PMID: 30738372 PMCID: PMC6370863 DOI: 10.1016/j.nicl.2019.101706] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2018] [Revised: 01/28/2019] [Accepted: 01/31/2019] [Indexed: 12/11/2022]
Abstract
There is strong clinical, imaging and pathological evidence that neurodegeneration is associated with altered brain connectivity. While functional imaging (fMRI) can detect resting and activated states of metabolic activity, its use is limited by poor temporal resolution, cost and confounding vascular parameters. By contrast, electrophysiological (e.g. EEG/MEG) recordings provide direct measures of neural activity with excellent temporal resolution, and source localization methodologies can address problems of spatial resolution, permitting measurement of functional activity of brain networks with a spatial resolution similar to that of fMRI. This opens an exciting therapeutic approach focussed on pharmacological and physiological modulation of brain network activity. This review describes current neurophysiological approaches towards evaluating cortical network dysfunction in common neurodegenerative disorders. It explores how modern neurophysiologic tools can provide markers for diagnosis, prognosis, subcategorization and clinical trial outcome measures, and how modulation of brain networks can contribute to new therapeutic approaches.
Collapse
Affiliation(s)
- Roisin McMackin
- Academic Unit of Neurology, Trinity Biomedical Sciences Institute, 152-160 Pearse St., Trinity College Dublin, The University of Dublin, Ireland.
| | - Peter Bede
- Academic Unit of Neurology, Trinity Biomedical Sciences Institute, 152-160 Pearse St., Trinity College Dublin, The University of Dublin, Ireland; Computational Neuroimaging Group, Trinity Biomedical Sciences Institute, 152-160 Pearse St., Trinity College Dublin, The University of Dublin, Ireland.
| | - Niall Pender
- Academic Unit of Neurology, Trinity Biomedical Sciences Institute, 152-160 Pearse St., Trinity College Dublin, The University of Dublin, Ireland; Beaumont Hospital Dublin, Department of Psychology, Beaumont Road, Beaumont, Dublin 9, Ireland.
| | - Orla Hardiman
- Academic Unit of Neurology, Trinity Biomedical Sciences Institute, 152-160 Pearse St., Trinity College Dublin, The University of Dublin, Ireland; Beaumont Hospital Dublin, Department of Neurology, Beaumont Road, Beaumont, Dublin 9, Ireland.
| | - Bahman Nasseroleslami
- Academic Unit of Neurology, Trinity Biomedical Sciences Institute, 152-160 Pearse St., Trinity College Dublin, The University of Dublin, Ireland.
| |
Collapse
|
23
|
McMackin R, Dukic S, Broderick M, Iyer PM, Pinto-Grau M, Mohr K, Chipika R, Coffey A, Buxo T, Schuster C, Gavin B, Heverin M, Bede P, Pender N, Lalor EC, Muthuraman M, Hardiman O, Nasseroleslami B. Dysfunction of attention switching networks in amyotrophic lateral sclerosis. Neuroimage Clin 2019; 22:101707. [PMID: 30735860 PMCID: PMC6365983 DOI: 10.1016/j.nicl.2019.101707] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2018] [Revised: 01/28/2019] [Accepted: 01/31/2019] [Indexed: 12/12/2022]
Abstract
OBJECTIVE To localise and characterise changes in cognitive networks in Amyotrophic Lateral Sclerosis (ALS) using source analysis of mismatch negativity (MMN) waveforms. RATIONALE The MMN waveform has an increased average delay in ALS. MMN has been attributed to change detection and involuntary attention switching. This therefore indicates pathological impairment of the neural network components which generate these functions. Source localisation can mitigate the poor spatial resolution of sensor-level EEG analysis by associating the sensor-level signals to the contributing brain sources. The functional activity in each generating source can therefore be individually measured and investigated as a quantitative biomarker of impairment in ALS or its sub-phenotypes. METHODS MMN responses from 128-channel electroencephalography (EEG) recordings in 58 ALS patients and 39 healthy controls were localised to source by three separate localisation methods, including beamforming, dipole fitting and exact low resolution brain electromagnetic tomography. RESULTS Compared with controls, ALS patients showed significant increase in power of the left posterior parietal, central and dorsolateral prefrontal cortices (false discovery rate = 0.1). This change correlated with impaired cognitive flexibility (rho = 0.45, 0.45, 0.47, p = .042, .055, .031 respectively). ALS patients also exhibited a decrease in the power of dipoles representing activity in the inferior frontal (left: p = 5.16 × 10-6, right: p = 1.07 × 10-5) and left superior temporal gyri (p = 9.30 × 10-6). These patterns were detected across three source localisation methods. Decrease in right inferior frontal gyrus activity was a good discriminator of ALS patients from controls (AUROC = 0.77) and an excellent discriminator of C9ORF72 expansion-positive patients from controls (AUROC = 0.95). INTERPRETATION Source localization of evoked potentials can reliably discriminate patterns of functional network impairment in ALS and ALS subgroups during involuntary attention switching. The discriminative ability of the detected cognitive changes in specific brain regions are comparable to those of functional magnetic resonance imaging (fMRI). Source analysis of high-density EEG patterns has excellent potential to provide non-invasive, data-driven quantitative biomarkers of network disruption that could be harnessed as novel neurophysiology-based outcome measures in clinical trials.
Collapse
Affiliation(s)
- Roisin McMackin
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland.
| | - Stefan Dukic
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland.
| | - Michael Broderick
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Trinity Centre for Bioengineering, Trinity College Dublin, The University of Dublin, Ireland.
| | - Parameswaran M Iyer
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Beaumont Hospital Dublin, Department of Neurology, Dublin, Ireland.
| | - Marta Pinto-Grau
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Beaumont Hospital Dublin, Department of Psychology, Dublin, Ireland.
| | - Kieran Mohr
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland.
| | - Rangariroyashe Chipika
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Computational Neuroimaging Group, Trinity College Dublin, The University of Dublin, Ireland..
| | - Amina Coffey
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Beaumont Hospital Dublin, Department of Neurology, Dublin, Ireland.
| | - Teresa Buxo
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland.
| | - Christina Schuster
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Computational Neuroimaging Group, Trinity College Dublin, The University of Dublin, Ireland..
| | - Brighid Gavin
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland
| | - Mark Heverin
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland.
| | - Peter Bede
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Computational Neuroimaging Group, Trinity College Dublin, The University of Dublin, Ireland..
| | - Niall Pender
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Beaumont Hospital Dublin, Department of Neurology, Dublin, Ireland
| | - Edmund C Lalor
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Trinity College Institute of Neuroscience, Trinity College Dublin, The University of Dublin, Ireland.; Department of Biomedical Engineering, University of Rochester, Rochester, New York, USA..
| | - Muthuraman Muthuraman
- Movement Disorders and Neurostimulation, Biomedical Statistics and Multimodal Signal Processing Unit, Department of Neurology, Johannes-Gutenberg-University Hospital, Mainz, Germany.
| | - Orla Hardiman
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland; Beaumont Hospital Dublin, Department of Neurology, Dublin, Ireland; Computational Neuroimaging Group, Trinity College Dublin, The University of Dublin, Ireland..
| | - Bahman Nasseroleslami
- Academic Unit of Neurology, Trinity College Dublin, The University of Dublin, Ireland.
| |
Collapse
|
24
|
Ryman SG, Cavanagh JF, Wertz CJ, Shaff NA, Dodd AB, Stevens B, Ling J, Yeo RA, Hanlon FM, Bustillo J, Stromberg SF, Lin DS, Abrams S, Mayer AR. Impaired Midline Theta Power and Connectivity During Proactive Cognitive Control in Schizophrenia. Biol Psychiatry 2018; 84:675-683. [PMID: 29921417 PMCID: PMC7654098 DOI: 10.1016/j.biopsych.2018.04.021] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/06/2018] [Revised: 04/17/2018] [Accepted: 04/17/2018] [Indexed: 12/20/2022]
Abstract
BACKGROUND Disrupted proactive cognitive control, a form of early selection and active goal maintenance, is hypothesized to underlie the broad cognitive deficits observed in patients with schizophrenia (SPs). Current research suggests that the disrupted activation within and connectivity between regions of the cognitive control network contribute to disrupted proactive cognitive control; however, no study has examined these mechanisms using an AX Continuous Performance Test task in schizophrenia. METHODS Twenty-six SPs (17 male subjects; mean age 34.46 ± 8.77 years) and 28 healthy control participants (HCs; 16 male subjects; mean age 31.43 ± 7.23 years) underwent an electroencephalogram while performing the AX Continuous Performance Test. To examine the extent of activation and level of connectivity within the cognitive control network, power, intertrial phase clustering, and intersite phase clustering metrics were calculated and analyzed. RESULTS SPs exhibited expected general decrements in behavioral performance relative to HCs and a more selective deficit in conditions requiring proactive cognitive control. Additionally, SPs exhibited deficits in midline theta power and connectivity during proactive cognitive control trials. Specifically, HCs exhibited significantly greater theta power for B cues relative to A cues, whereas SPs exhibited no significant differences between A- and B-cue theta power. Additionally, differential theta connectivity patterns were observed in SPs and HCs. Behavioral measures of proactive cognitive control predicted functional outcomes in SPs. CONCLUSIONS This study suggests that low-frequency midline theta activity is selectively disrupted during proactive cognitive control in SPs. The disrupted midline theta activity may reflect a failure of SPs to proactively recruit cognitive control processes.
Collapse
|
25
|
Filatova OG, Yang Y, Dewald JPA, Tian R, Maceira-Elvira P, Takeda Y, Kwakkel G, Yamashita O, van der Helm FCT. Dynamic Information Flow Based on EEG and Diffusion MRI in Stroke: A Proof-of-Principle Study. Front Neural Circuits 2018; 12:79. [PMID: 30327592 PMCID: PMC6174251 DOI: 10.3389/fncir.2018.00079] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2018] [Accepted: 09/10/2018] [Indexed: 01/07/2023] Open
Abstract
In hemiparetic stroke, functional recovery of paretic limb may occur with the reorganization of neural networks in the brain. Neuroimaging techniques, such as magnetic resonance imaging (MRI), have a high spatial resolution which can be used to reveal anatomical changes in the brain following a stroke. However, low temporal resolution of MRI provides less insight of dynamic changes of brain activity. In contrast, electro-neurophysiological techniques, such as electroencephalography (EEG), have an excellent temporal resolution to measure such transient events, however are hindered by its low spatial resolution. This proof-of-principle study assessed a novel multimodal brain imaging technique namely Variational Bayesian Multimodal Encephalography (VBMEG), which aims to improve the spatial resolution of EEG for tracking the information flow inside the brain and its changes following a stroke. The limitations of EEG are complemented by constraints derived from anatomical MRI and diffusion weighted imaging (DWI). EEG data were acquired from individuals suffering from a stroke as well as able-bodied participants while electrical stimuli were delivered sequentially at their index finger in the left and right hand, respectively. The locations of active sources related to this stimulus were precisely identified, resulting in high Variance Accounted For (VAF above 80%). An accurate estimation of dynamic information flow between sources was achieved in this study, showing a high VAF (above 90%) in the cross-validation test. The estimated dynamic information flow was compared between chronic hemiparetic stroke and able-bodied individuals. The results demonstrate the feasibility of VBMEG method in revealing the changes of information flow in the brain after stroke. This study verified the VBMEG method as an advanced computational approach to track the dynamic information flow in the brain following a stroke. This may lead to the development of a quantitative tool for monitoring functional changes of the cortical neural networks after a unilateral brain injury and therefore facilitate the research into, and the practice of stroke rehabilitation.
Collapse
Affiliation(s)
- Olena G. Filatova
- Department of Biomechanical Engineering, Delft University of Technology, Delft, Netherlands
| | - Yuan Yang
- Department of Biomechanical Engineering, Delft University of Technology, Delft, Netherlands
- Department of Physical Therapy and Human Movement Sciences, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States
| | - Julius P. A. Dewald
- Department of Biomechanical Engineering, Delft University of Technology, Delft, Netherlands
- Department of Physical Therapy and Human Movement Sciences, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States
| | - Runfeng Tian
- Department of Biomechanical Engineering, Delft University of Technology, Delft, Netherlands
| | - Pablo Maceira-Elvira
- Department of Biomechanical Engineering, Delft University of Technology, Delft, Netherlands
- Clinical Neuroengineering, Centre for Neuroprosthetics, Swiss Federal Institute of Technology (EPFL), Clinique Romande de Réadaptation, Sion, Switzerland
| | - Yusuke Takeda
- Center for Advanced Intelligence Project, RIKEN, Tokyo, Japan
- Neural Information Analysis Laboratories, ATR, Kyoto, Japan
| | - Gert Kwakkel
- Department of Rehabilitation Medicine, Amsterdam Neurosciences and Amsterdam Movement Sciences, University Medical Centre Amsterdam, Amsterdam, Netherlands
| | - Okito Yamashita
- Center for Advanced Intelligence Project, RIKEN, Tokyo, Japan
- Neural Information Analysis Laboratories, ATR, Kyoto, Japan
| | - Frans C. T. van der Helm
- Department of Biomechanical Engineering, Delft University of Technology, Delft, Netherlands
- Department of Physical Therapy and Human Movement Sciences, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States
| |
Collapse
|
26
|
Seeland A, Krell MM, Straube S, Kirchner EA. Empirical Comparison of Distributed Source Localization Methods for Single-Trial Detection of Movement Preparation. Front Hum Neurosci 2018; 12:340. [PMID: 30233341 PMCID: PMC6129768 DOI: 10.3389/fnhum.2018.00340] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2018] [Accepted: 08/09/2018] [Indexed: 11/17/2022] Open
Abstract
The development of technologies for the treatment of movement disorders, like stroke, is still of particular interest in brain-computer interface (BCI) research. In this context, source localization methods (SLMs), that reconstruct the cerebral origin of brain activity measured outside the head, e.g., via electroencephalography (EEG), can add a valuable insight into the current state and progress of the treatment. However, in BCIs SLMs were often solely considered as advanced signal processing methods that are compared against other methods based on the classification performance alone. Though, this approach does not guarantee physiological meaningful results. We present an empirical comparison of three established distributed SLMs with the aim to use one for single-trial movement prediction. The SLMs wMNE, sLORETA, and dSPM were applied on data acquired from eight subjects performing voluntary arm movements. Besides the classification performance as quality measure, a distance metric was used to asses the physiological plausibility of the methods. For the distance metric, which is usually measured to the source position of maximum activity, we further propose a variant based on clusters that is better suited for the single-trial case in which several sources are likely and the actual maximum is unknown. The two metrics showed different results. The classification performance revealed no significant differences across subjects, indicating that all three methods are equally well-suited for single-trial movement prediction. On the other hand, we obtained significant differences in the distance measure, favoring wMNE even after correcting the distance with the number of reconstructed clusters. Further, distance results were inconsistent with the traditional method using the maximum, indicating that for wMNE the point of maximum source activity often did not coincide with the nearest activation cluster. In summary, the presented comparison might help users to select an appropriate SLM and to understand the implications of the selection. The proposed methodology pays attention to the particular properties of distributed SLMs and can serve as a framework for further comparisons.
Collapse
Affiliation(s)
- Anett Seeland
- Robotics Innovation Center, German Research Center for Artificial Intelligence (DFKI GmbH), Bremen, Germany
| | - Mario M Krell
- Robotics Group, Faculty of Mathematics and Computer Science, University of Bremen, Bremen, Germany.,International Computer Science Institute, University of California, Berkeley, Berkeley, CA, United States.,University of California, Berkeley, Berkeley, CA, United States
| | - Sirko Straube
- Robotics Innovation Center, German Research Center for Artificial Intelligence (DFKI GmbH), Bremen, Germany
| | - Elsa A Kirchner
- Robotics Innovation Center, German Research Center for Artificial Intelligence (DFKI GmbH), Bremen, Germany.,Robotics Group, Faculty of Mathematics and Computer Science, University of Bremen, Bremen, Germany
| |
Collapse
|
27
|
Aging-associated changes of movement-related functional connectivity in the human brain. Neuropsychologia 2018; 117:520-529. [DOI: 10.1016/j.neuropsychologia.2018.07.006] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2017] [Revised: 05/15/2018] [Accepted: 07/06/2018] [Indexed: 01/22/2023]
|
28
|
Rana KD, Hämäläinen MS, Vaina LM. Improving the Nulling Beamformer Using Subspace Suppression. Front Comput Neurosci 2018; 12:35. [PMID: 29946248 PMCID: PMC6005888 DOI: 10.3389/fncom.2018.00035] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Accepted: 05/14/2018] [Indexed: 11/18/2022] Open
Abstract
Magnetoencephalography (MEG) captures the magnetic fields generated by neuronal current sources with sensors outside the head. In MEG analysis these current sources are estimated from the measured data to identify the locations and time courses of neural activity. Since there is no unique solution to this so-called inverse problem, multiple source estimation techniques have been developed. The nulling beamformer (NB), a modified form of the linearly constrained minimum variance (LCMV) beamformer, is specifically used in the process of inferring interregional interactions and is designed to eliminate shared signal contributions, or cross-talk, between regions of interest (ROIs) that would otherwise interfere with the connectivity analyses. The nulling beamformer applies the truncated singular value decomposition (TSVD) to remove small signal contributions from a ROI to the sensor signals. However, ROIs with strong crosstalk will have high separating power in the weaker components, which may be removed by the TSVD operation. To address this issue we propose a new method, the nulling beamformer with subspace suppression (NBSS). This method, controlled by a tuning parameter, reweights the singular values of the gain matrix mapping from source to sensor space such that components with high overlap are reduced. By doing so, we are able to measure signals between nearby source locations with limited cross-talk interference, allowing for reliable cortical connectivity analysis between them. In two simulations, we demonstrated that NBSS reduces cross-talk while retaining ROIs' signal power, and has higher separating power than both the minimum norm estimate (MNE) and the nulling beamformer without subspace suppression. We also showed that NBSS successfully localized the auditory M100 event-related field in primary auditory cortex, measured from a subject undergoing an auditory localizer task, and suppressed cross-talk in a nearby region in the superior temporal sulcus.
Collapse
Affiliation(s)
- Kunjan D Rana
- Brain and Vision Research Laboratory, Department of Biomedical Engineering, Boston University, Boston, MA, United States
| | - Matti S Hämäläinen
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, United States.,Department of Radiology, MGH, Harvard Medical School, Boston, MA, United States
| | - Lucia M Vaina
- Brain and Vision Research Laboratory, Department of Biomedical Engineering, Boston University, Boston, MA, United States.,Department of Neurology, MGH, Harvard Medical School, Boston, MA, United States
| |
Collapse
|
29
|
A review of anisotropic conductivity models of brain white matter based on diffusion tensor imaging. Med Biol Eng Comput 2018; 56:1325-1332. [DOI: 10.1007/s11517-018-1845-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2016] [Accepted: 05/08/2018] [Indexed: 10/14/2022]
|
30
|
Pirondini E, Babadi B, Obregon-Henao G, Lamus C, Malik WQ, Hamalainen MS, Purdon PL. Computationally Efficient Algorithms for Sparse, Dynamic Solutions to the EEG Source Localization Problem. IEEE Trans Biomed Eng 2018; 65:1359-1372. [PMID: 28920892 DOI: 10.1109/tbme.2017.2739824] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
OBJECTIVE Electroencephalography (EEG) and magnetoencephalography noninvasively record scalp electromagnetic fields generated by cerebral currents, revealing millisecond-level brain dynamics useful for neuroscience and clinical applications. Estimating the currents that generate these fields, i.e., source localization, is an ill-conditioned inverse problem. Solutions to this problem have focused on spatial continuity constraints, dynamic modeling, or sparsity constraints. The combination of these key ideas could offer significant performance improvements, but substantial computational costs pose a challenge for practical application of such approaches. Here, we propose a new method for EEG source localization that combines: 1) covariance estimation for both source and measurement noises; 2) linear state-space dynamics; and 3) sparsity constraints, using 4) novel computationally efficient estimation algorithms. METHODS For source covariance estimation, we use a locally smooth basis alongside sparsity enforcing priors. For EEG measurement noise covariance estimation, we use an inverse Wishart prior density. We estimate these model parameters using an expectation-maximization algorithm that employs steady-state filtering and smoothing to expedite computations. RESULTS We characterized the performance of our method by analyzing simulated data and experimental recordings of eyes-closed alpha oscillations. Our sparsity enforcing priors significantly improved estimation of both the spatial distribution and time course of simulated data, while improving computational time by more than 12-fold over previous dynamic methods. CONCLUSION We developed and demonstrated a novel method for improved EEG source localization employing spatial covariance estimation, dynamics, and sparsity. SIGNIFICANCE Our approach provides substantial performance improvements over existing methods using computationally efficient algorithms that will facilitate practical applications in both neuroscience and medicine.
Collapse
|
31
|
Piva M, Zhang X, Noah JA, Chang SWC, Hirsch J. Distributed Neural Activity Patterns during Human-to-Human Competition. Front Hum Neurosci 2017; 11:571. [PMID: 29218005 PMCID: PMC5703701 DOI: 10.3389/fnhum.2017.00571] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2017] [Accepted: 11/10/2017] [Indexed: 11/19/2022] Open
Abstract
Interpersonal interaction is the essence of human social behavior. However, conventional neuroimaging techniques have tended to focus on social cognition in single individuals rather than on dyads or groups. As a result, relatively little is understood about the neural events that underlie face-to-face interaction. We resolved some of the technical obstacles inherent in studying interaction using a novel imaging modality and aimed to identify neural mechanisms engaged both within and across brains in an ecologically valid instance of interpersonal competition. Functional near-infrared spectroscopy was utilized to simultaneously measure hemodynamic signals representing neural activity in pairs of subjects playing poker against each other (human–human condition) or against computer opponents (human–computer condition). Previous fMRI findings concerning single subjects confirm that neural areas recruited during social cognition paradigms are individually sensitive to human–human and human–computer conditions. However, it is not known whether face-to-face interactions between opponents can extend these findings. We hypothesize distributed effects due to live processing and specific variations in across-brain coherence not observable in single-subject paradigms. Angular gyrus (AG), a component of the temporal-parietal junction (TPJ) previously found to be sensitive to socially relevant cues, was selected as a seed to measure within-brain functional connectivity. Increased connectivity was confirmed between AG and bilateral dorsolateral prefrontal cortex (dlPFC) as well as a complex including the left subcentral area (SCA) and somatosensory cortex (SS) during interaction with a human opponent. These distributed findings were supported by contrast measures that indicated increased activity at the left dlPFC and frontopolar area that partially overlapped with the region showing increased functional connectivity with AG. Across-brain analyses of neural coherence between the players revealed synchrony between dlPFC and supramarginal gyrus (SMG) and SS in addition to synchrony between AG and the fusiform gyrus (FG) and SMG. These findings present the first evidence of a frontal-parietal neural complex including the TPJ, dlPFC, SCA, SS, and FG that is more active during human-to-human social cognition both within brains (functional connectivity) and across brains (across-brain coherence), supporting a model of functional integration of socially and strategically relevant information during live face-to-face competitive behaviors.
Collapse
Affiliation(s)
- Matthew Piva
- Interdepartmental Neuroscience Program, Yale School of Medicine, Yale University, New Haven, CT, United States
| | - Xian Zhang
- Department of Psychiatry, Yale School of Medicine, Yale University, New Haven, CT, United States
| | - J Adam Noah
- Department of Psychiatry, Yale School of Medicine, Yale University, New Haven, CT, United States
| | - Steve W C Chang
- Interdepartmental Neuroscience Program, Yale School of Medicine, Yale University, New Haven, CT, United States.,Department of Psychology, Yale University, New Haven, CT, United States.,Department of Neuroscience, Yale School of Medicine, Yale University, New Haven, CT, United States
| | - Joy Hirsch
- Interdepartmental Neuroscience Program, Yale School of Medicine, Yale University, New Haven, CT, United States.,Department of Psychiatry, Yale School of Medicine, Yale University, New Haven, CT, United States.,Department of Neuroscience, Yale School of Medicine, Yale University, New Haven, CT, United States.,Department of Comparative Medicine, Yale School of Medicine, Yale University, New Haven, CT, United States.,Department of Medical Physics and Biomedical Engineering, University College London, London, United Kingdom
| |
Collapse
|
32
|
Gohel B, Lim S, Kim MY, Kwon H, Kim K. Approximate Subject Specific Pseudo MRI from an Available MRI Dataset for MEG Source Imaging. Front Neuroinform 2017; 11:50. [PMID: 28848418 PMCID: PMC5550724 DOI: 10.3389/fninf.2017.00050] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2017] [Accepted: 07/25/2017] [Indexed: 11/29/2022] Open
Abstract
Computation of headmodel and sourcemodel from the subject's MRI scan is an essential step for source localization of magnetoencephalography (MEG) (or EEG) sensor signals. In the absence of a real MRI scan, pseudo MRI (i.e., associated headmodel and sourcemodel) is often approximated from an available standard MRI template or pool of MRI scans considering the subject's digitized head surface. In the present study, we approximated two types of pseudo MRI (i.e., associated headmodel and sourcemodel) using an available pool of MRI scans with the focus on MEG source imaging. The first was the first rank pseudo MRI; that is, the MRI scan in the dataset having the lowest objective registration error (ORE) after being registered (rigid body transformation with isotropic scaling) to the subject's digitized head surface. The second was the averaged rank pseudo MRI that is generated by averaging of headmodels and sourcemodels from multiple MRI scans respectively, after being registered to the subject's digitized head surface. Subject level analysis showed that the mean upper bound of source location error for the approximated sourcemodel in reference to the real one was 10 ± 3 mm for the averaged rank pseudo MRI, which was significantly lower than the first rank pseudo MRI approach. Functional group source response in the brain to visual stimulation in the form of event-related power (ERP) at the time latency of peak amplitude showed noticeably identical source distribution for first rank pseudo MRI, averaged rank pseudo MRI, and real MRI. The source localization error for functional peak response was significantly lower for averaged rank pseudo MRI compared to first rank pseudo MRI. We conclude that it is feasible to use approximated pseudo MRI, particularly the averaged rank pseudo MRI, as a substitute for real MRI without losing the generality of the functional group source response.
Collapse
Affiliation(s)
- Bakul Gohel
- Center for Biosignals, Korea Research Institute of Standards and ScienceDaejeon, South Korea
| | - Sanghyun Lim
- Center for Biosignals, Korea Research Institute of Standards and ScienceDaejeon, South Korea
| | - Min-Young Kim
- Center for Biosignals, Korea Research Institute of Standards and ScienceDaejeon, South Korea
| | - Hyukchan Kwon
- Center for Biosignals, Korea Research Institute of Standards and ScienceDaejeon, South Korea
| | - Kiwoong Kim
- Center for Biosignals, Korea Research Institute of Standards and ScienceDaejeon, South Korea
| |
Collapse
|
33
|
Hedrich T, Pellegrino G, Kobayashi E, Lina JM, Grova C. Comparison of the spatial resolution of source imaging techniques in high-density EEG and MEG. Neuroimage 2017; 157:531-544. [PMID: 28619655 DOI: 10.1016/j.neuroimage.2017.06.022] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2016] [Revised: 04/29/2017] [Accepted: 06/09/2017] [Indexed: 11/17/2022] Open
Abstract
BACKGROUND The present study aims at evaluating and comparing electrical and magnetic distributed source imaging methods applied to high-density Electroencephalography (hdEEG) and Magnetoencephalography (MEG) data. We used resolution matrices to characterize spatial resolution properties of Minimum Norm Estimate (MNE), dynamic Statistical Parametric Mapping (dSPM), standardized Low-Resolution Electromagnetic Tomography (sLORETA) and coherent Maximum Entropy on the Mean (cMEM, an entropy-based technique). The resolution matrix provides information of the Point Spread Functions (PSF) and of the Crosstalk functions (CT), this latter being also called source leakage, as it reflects the influence of a source on its neighbors. METHODS The spatial resolution of the inverse operators was first evaluated theoretically and then with real data acquired using electrical median nerve stimulation on five healthy participants. We evaluated the Dipole Localization Error (DLE) and the Spatial Dispersion (SD) of each PSF and CT map. RESULTS cMEM showed the smallest spatial spread (SD) for both PSF and CT maps, whereas localization errors (DLE) were similar for all methods. Whereas cMEM SD values were lower in MEG compared to hdEEG, the other methods slightly favored hdEEG over MEG. In real data, cMEM provided similar localization error and significantly less spatial spread than other methods for both MEG and hdEEG. Whereas both MEG and hdEEG provided very accurate localizations, all the source imaging methods actually performed better in MEG compared to hdEEG according to all evaluation metrics, probably due to the higher signal-to-noise ratio of the data in MEG. CONCLUSION Our overall results show that all investigated methods provide similar localization errors, suggesting very accurate localization for both MEG and hdEEG when similar number of sensors are considered for both modalities. Intrinsic properties of source imaging methods as well as their behavior for well-controlled tasks, suggest an overall better performance of cMEM in regards to spatial resolution and spatial leakage for both hdEEG and MEG. This indicates that cMEM would be a good candidate for studying source localization of focal and extended generators as well as functional connectivity studies.
Collapse
Affiliation(s)
- T Hedrich
- Multimodal Functional Imaging Lab, Biomedical Engineering Dpt., McGill University, Montreal, Canada.
| | - G Pellegrino
- Multimodal Functional Imaging Lab, Biomedical Engineering Dpt., McGill University, Montreal, Canada; Neurology and Neurosurgery Department, Montreal Neurological Institute (MNI), McGill University, Montreal, Canada; San Camillo Hospital IRCCS, Venice, Italy
| | - E Kobayashi
- Neurology and Neurosurgery Department, Montreal Neurological Institute (MNI), McGill University, Montreal, Canada
| | - J M Lina
- Département de Génie Électrique, École de Technologie Supérieure, Canada; Centre de recherches mathémathiques, Université de Montréal, Montreal, Canada; Center for Advanced Research on Sleep Medecine (CEAMS), hôpital du Sacré-Coeur, Montreal, Canada
| | - C Grova
- Multimodal Functional Imaging Lab, Biomedical Engineering Dpt., McGill University, Montreal, Canada; Neurology and Neurosurgery Department, Montreal Neurological Institute (MNI), McGill University, Montreal, Canada; Physics Dpt., PERFORM Centre, Concordia University, Canada; Centre de recherches mathémathiques, Université de Montréal, Montreal, Canada
| |
Collapse
|
34
|
Kordowski P, Matysiak A, König R, Sielużycki C. Simultaneous spatio-temporal matching pursuit decomposition of evoked brain responses in MEG. BIOLOGICAL CYBERNETICS 2017; 111:69-89. [PMID: 28110406 PMCID: PMC5326632 DOI: 10.1007/s00422-016-0707-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Accepted: 11/12/2016] [Indexed: 06/06/2023]
Abstract
We present a novel approach to the spatio-temporal decomposition of evoked brain responses in magnetoencephalography (MEG) aiming at a sparse representation of the underlying brain activity in terms of spatio-temporal atoms. Our approach is characterized by three attributes which constitute significant improvements with respect to existing approaches: (1) the spatial and temporal decomposition is addressed simultaneously rather than sequentially, with the benefit that source loci and corresponding waveforms can be unequivocally allocated to each other, and, hence, allow a plausible physiological interpretation of the parametrized data; (2) it is free from severe a priori assumptions about the solution space; (3) it comprises an optimization technique for the use of very large spatial and temporal subdirectories to greatly reduce the otherwise enormous computational cost by making use of the Cauchy-Schwarz inequality. We demonstrate the efficiency of the approach with simulations and real MEG data obtained from a subject exposed to a simple auditory stimulus.
Collapse
Affiliation(s)
- Paweł Kordowski
- Biomedical Physics Division, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, ul. Pasteura 5, 02-093 Warsaw, Poland
- Special Lab Non-Invasive Brain Imaging, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany
| | - Artur Matysiak
- Special Lab Non-Invasive Brain Imaging, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany
| | - Reinhard König
- Special Lab Non-Invasive Brain Imaging, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany
| | - Cezary Sielużycki
- Special Lab Non-Invasive Brain Imaging, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany
- Control of Normal and Abnormal Movements Team, ICM Brain and Spine Institute, Pierre-and-Marie-Curie University (Paris VI, Sorbonne), INSERM UMR1127, CNRS UMR7225, Hôpital Pitié Salpêtrière, 47 bd de l’Hôpital, 75013 Paris, France
- Faculty of Computer Science and Management, Wrocław University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland
- Department of Biomedical Engineering, Faculty of Fundamental Problems of Technology, Wrocław University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland
| |
Collapse
|
35
|
Clayson PE, Miller GA. Psychometric considerations in the measurement of event-related brain potentials: Guidelines for measurement and reporting. Int J Psychophysiol 2017; 111:57-67. [DOI: 10.1016/j.ijpsycho.2016.09.005] [Citation(s) in RCA: 71] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2016] [Revised: 08/05/2016] [Accepted: 09/09/2016] [Indexed: 02/07/2023]
|
36
|
Al-Subari K, Al-Baddai S, Tomé AM, Volberg G, Ludwig B, Lang EW. Combined EMD-sLORETA Analysis of EEG Data Collected during a Contour Integration Task. PLoS One 2016; 11:e0167957. [PMID: 27936219 PMCID: PMC5148586 DOI: 10.1371/journal.pone.0167957] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2016] [Accepted: 11/15/2016] [Indexed: 11/18/2022] Open
Abstract
Lately, Ensemble Empirical Mode Decomposition (EEMD) techniques receive growing interest in biomedical data analysis. Event-Related Modes (ERMs) represent features extracted by an EEMD from electroencephalographic (EEG) recordings. We present a new approach for source localization of EEG data based on combining ERMs with inverse models. As the first step, 64 channel EEG recordings are pooled according to six brain areas and decomposed, by applying an EEMD, into their underlying ERMs. Then, based upon the problem at hand, the most closely related ERM, in terms of frequency and amplitude, is combined with inverse modeling techniques for source localization. More specifically, the standardized low resolution brain electromagnetic tomography (sLORETA) procedure is employed in this work. Accuracy and robustness of the results indicate that this approach deems highly promising in source localization techniques for EEG data.
Collapse
Affiliation(s)
- Karema Al-Subari
- Department of Biology, Institute of Biophysics, University of Regensburg, Regensburg, Germany
- Department of Linguistics, Literature and Culture, Institute of Information Science, University of Regensburg, Regensburg, Germany
| | - Saad Al-Baddai
- Department of Biology, Institute of Biophysics, University of Regensburg, Regensburg, Germany
- Department of Linguistics, Literature and Culture, Institute of Information Science, University of Regensburg, Regensburg, Germany
| | - Ana Maria Tomé
- Department of Electrical Engineering, Telecommunication and Informatics, Institut of Electrical Engineering and Electronics, Universidade de Aveiro, Aveiro, Portugal
| | - Gregor Volberg
- Department of Psychology, Pedagogics and Sport, Institute of Experimental Psychology, University of Regensburg, Regensburg, Germany
| | - Bernd Ludwig
- Department of Linguistics, Literature and Culture, Institute of Information Science, University of Regensburg, Regensburg, Germany
| | - Elmar W. Lang
- Department of Biology, Institute of Biophysics, University of Regensburg, Regensburg, Germany
| |
Collapse
|
37
|
Manca AD, Grimaldi M. Vowels and Consonants in the Brain: Evidence from Magnetoencephalographic Studies on the N1m in Normal-Hearing Listeners. Front Psychol 2016; 7:1413. [PMID: 27713712 PMCID: PMC5031792 DOI: 10.3389/fpsyg.2016.01413] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2016] [Accepted: 09/05/2016] [Indexed: 01/07/2023] Open
Abstract
Speech sound perception is one of the most fascinating tasks performed by the human brain. It involves a mapping from continuous acoustic waveforms onto the discrete phonological units computed to store words in the mental lexicon. In this article, we review the magnetoencephalographic studies that have explored the timing and morphology of the N1m component to investigate how vowels and consonants are computed and represented within the auditory cortex. The neurons that are involved in the N1m act to construct a sensory memory of the stimulus due to spatially and temporally distributed activation patterns within the auditory cortex. Indeed, localization of auditory fields maps in animals and humans suggested two levels of sound coding, a tonotopy dimension for spectral properties and a tonochrony dimension for temporal properties of sounds. When the stimulus is a complex speech sound, tonotopy and tonochrony data may give important information to assess whether the speech sound parsing and decoding are generated by pure bottom-up reflection of acoustic differences or whether they are additionally affected by top-down processes related to phonological categories. Hints supporting pure bottom-up processing coexist with hints supporting top-down abstract phoneme representation. Actually, N1m data (amplitude, latency, source generators, and hemispheric distribution) are limited and do not help to disentangle the issue. The nature of these limitations is discussed. Moreover, neurophysiological studies on animals and neuroimaging studies on humans have been taken into consideration. We compare also the N1m findings with the investigation of the magnetic mismatch negativity (MMNm) component and with the analogous electrical components, the N1 and the MMN. We conclude that N1 seems more sensitive to capture lateralization and hierarchical processes than N1m, although the data are very preliminary. Finally, we suggest that MEG data should be integrated with EEG data in the light of the neural oscillations framework and we propose some concerns that should be addressed by future investigations if we want to closely line up language research with issues at the core of the functional brain mechanisms.
Collapse
Affiliation(s)
- Anna Dora Manca
- Dipartimento di Studi Umanistici, Centro di Ricerca Interdisciplinare sul Linguaggio, University of SalentoLecce, Italy; Laboratorio Diffuso di Ricerca Interdisciplinare Applicata alla MedicinaLecce, Italy
| | - Mirko Grimaldi
- Dipartimento di Studi Umanistici, Centro di Ricerca Interdisciplinare sul Linguaggio, University of SalentoLecce, Italy; Laboratorio Diffuso di Ricerca Interdisciplinare Applicata alla MedicinaLecce, Italy
| |
Collapse
|
38
|
Stadlbauer A, Kaltenhäuser M, Buchfelder M, Brandner S, Neuhuber WL, Renner B. Spatiotemporal Pattern of Human Cortical and Subcortical Activity during Early-Stage Odor Processing. Chem Senses 2016; 41:783-794. [DOI: 10.1093/chemse/bjw074] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
|
39
|
Tan A, Hu L, Tu Y, Chen R, Hung YS, Zhang Z. N1 Magnitude of Auditory Evoked Potentials and Spontaneous Functional Connectivity Between Bilateral Heschl's Gyrus Are Coupled at Interindividual Level. Brain Connect 2016; 6:496-504. [PMID: 27105665 DOI: 10.1089/brain.2016.0418] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
N1 component of auditory evoked potentials is extensively used to investigate the propagation and processing of auditory inputs. However, the substantial interindividual variability of N1 could be a possible confounding factor when comparing different individuals or groups. Therefore, identifying the neuronal mechanism and origin of the interindividual variability of N1 is crucial in basic research and clinical applications. This study is aimed to use simultaneously recorded electroencephalography (EEG) and functional magnetic resonance imaging (fMRI) data to investigate the coupling between N1 and spontaneous functional connectivity (FC). EEG and fMRI data were simultaneously collected from a group of healthy individuals during a pure-tone listening task. Spontaneous FC was estimated from spontaneous blood oxygenation level-dependent (BOLD) signals that were isolated by regressing out task evoked BOLD signals from raw BOLD signals and then was correlated to N1 magnitude across individuals. It was observed that spontaneous FC between bilateral Heschl's gyrus was significantly and positively correlated with N1 magnitude across individuals (Spearman's R = 0.829, p < 0.001). The specificity of this observation was further confirmed by two whole-brain voxelwise analyses (voxel-mirrored homotopic connectivity analysis and seed-based connectivity analysis). These results enriched our understanding of the functional significance of the coupling between event-related brain responses and spontaneous brain connectivity, and hold the potential to increase the applicability of brain responses as a probe to the mechanism underlying pathophysiological conditions.
Collapse
Affiliation(s)
- Ao Tan
- 1 Department of Electrical and Electronic Engineering, The University of Hong Kong , Hong Kong, China
| | - Li Hu
- 2 Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China .,3 Faculty of Psychology, Southwest University , Chongqing, China
| | - Yiheng Tu
- 1 Department of Electrical and Electronic Engineering, The University of Hong Kong , Hong Kong, China
| | - Rui Chen
- 3 Faculty of Psychology, Southwest University , Chongqing, China
| | - Yeung Sam Hung
- 1 Department of Electrical and Electronic Engineering, The University of Hong Kong , Hong Kong, China
| | - Zhiguo Zhang
- 4 School of Data and Computer Science, Sun Yat-Sen University , Guangzhou, China
| |
Collapse
|
40
|
Fiederer LDJ, Vorwerk J, Lucka F, Dannhauer M, Yang S, Dümpelmann M, Schulze-Bonhage A, Aertsen A, Speck O, Wolters CH, Ball T. The role of blood vessels in high-resolution volume conductor head modeling of EEG. Neuroimage 2016; 128:193-208. [PMID: 26747748 PMCID: PMC5225375 DOI: 10.1016/j.neuroimage.2015.12.041] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2015] [Revised: 11/27/2015] [Accepted: 12/22/2015] [Indexed: 12/18/2022] Open
Abstract
Reconstruction of the electrical sources of human EEG activity at high spatio-temporal accuracy is an important aim in neuroscience and neurological diagnostics. Over the last decades, numerous studies have demonstrated that realistic modeling of head anatomy improves the accuracy of source reconstruction of EEG signals. For example, including a cerebro-spinal fluid compartment and the anisotropy of white matter electrical conductivity were both shown to significantly reduce modeling errors. Here, we for the first time quantify the role of detailed reconstructions of the cerebral blood vessels in volume conductor head modeling for EEG. To study the role of the highly arborized cerebral blood vessels, we created a submillimeter head model based on ultra-high-field-strength (7T) structural MRI datasets. Blood vessels (arteries and emissary/intraosseous veins) were segmented using Frangi multi-scale vesselness filtering. The final head model consisted of a geometry-adapted cubic mesh with over 17×10(6) nodes. We solved the forward model using a finite-element-method (FEM) transfer matrix approach, which allowed reducing computation times substantially and quantified the importance of the blood vessel compartment by computing forward and inverse errors resulting from ignoring the blood vessels. Our results show that ignoring emissary veins piercing the skull leads to focal localization errors of approx. 5 to 15mm. Large errors (>2cm) were observed due to the carotid arteries and the dense arterial vasculature in areas such as in the insula or in the medial temporal lobe. Thus, in such predisposed areas, errors caused by neglecting blood vessels can reach similar magnitudes as those previously reported for neglecting white matter anisotropy, the CSF or the dura - structures which are generally considered important components of realistic EEG head models. Our findings thus imply that including a realistic blood vessel compartment in EEG head models will be helpful to improve the accuracy of EEG source analyses particularly when high accuracies in brain areas with dense vasculature are required.
Collapse
Affiliation(s)
- L D J Fiederer
- Intracranial EEG and Brain Imaging Lab, Epilepsy Center, University Hospital Freiburg, Germany; Neurobiology and Biophysics, Faculty of Biology, University of Freiburg, Germany; BrainLinks-BrainTools Cluster of Excellence, University of Freiburg, Germany; Bernstein Center Freiburg, University of Freiburg, Germany.
| | - J Vorwerk
- Institute for Biomagnetism and Biosignalanalysis, University of Münster, Germany
| | - F Lucka
- Institute for Biomagnetism and Biosignalanalysis, University of Münster, Germany; Institute for Computational and Applied Mathematics, University of Münster, Germany; Department of Computer Science, University College London, WC1E 6BT London, UK
| | - M Dannhauer
- Scientific Computing and Imaging Institute, 72 So. Central Campus Drive, Salt Lake City, Utah 84112, USA; Center for Integrative Biomedical Computing, University of Utah, 72 S. Central Campus Drive, 84112, Salt Lake City, UT, USA
| | - S Yang
- Dept. of Biomedical Magnetic Resonance, Otto-von-Guericke University Magdeburg, Germany
| | - M Dümpelmann
- Intracranial EEG and Brain Imaging Lab, Epilepsy Center, University Hospital Freiburg, Germany; BrainLinks-BrainTools Cluster of Excellence, University of Freiburg, Germany
| | - A Schulze-Bonhage
- BrainLinks-BrainTools Cluster of Excellence, University of Freiburg, Germany; Bernstein Center Freiburg, University of Freiburg, Germany
| | - A Aertsen
- Neurobiology and Biophysics, Faculty of Biology, University of Freiburg, Germany; Bernstein Center Freiburg, University of Freiburg, Germany
| | - O Speck
- Dept. of Biomedical Magnetic Resonance, Otto-von-Guericke University Magdeburg, Germany; Leibniz Institute for Neurobiology, Magdeburg, Germany; German Center for Neurodegenerative Diseases (DZNE), Site Magdeburg, Germany; Center for Behavioral Brain Sciences, Magdeburg, Germany
| | - C H Wolters
- Institute for Biomagnetism and Biosignalanalysis, University of Münster, Germany
| | - T Ball
- Intracranial EEG and Brain Imaging Lab, Epilepsy Center, University Hospital Freiburg, Germany; BrainLinks-BrainTools Cluster of Excellence, University of Freiburg, Germany; Bernstein Center Freiburg, University of Freiburg, Germany
| |
Collapse
|
41
|
MEG-EEG Information Fusion and Electromagnetic Source Imaging: From Theory to Clinical Application in Epilepsy. Brain Topogr 2015; 28:785-812. [PMID: 26016950 PMCID: PMC4600479 DOI: 10.1007/s10548-015-0437-3] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2014] [Accepted: 05/04/2015] [Indexed: 11/26/2022]
Abstract
The purpose of this study is to develop and quantitatively assess whether fusion of EEG and MEG (MEEG) data within the maximum entropy on the mean (MEM) framework increases the spatial accuracy of source localization, by yielding better recovery of the spatial extent and propagation pathway of the underlying generators of inter-ictal epileptic discharges (IEDs). The key element in this study is the integration of the complementary information from EEG and MEG data within the MEM framework. MEEG was compared with EEG and MEG when localizing single transient IEDs. The fusion approach was evaluated using realistic simulation models involving one or two spatially extended sources mimicking propagation patterns of IEDs. We also assessed the impact of the number of EEG electrodes required for an efficient EEG–MEG fusion. MEM was compared with minimum norm estimate, dynamic statistical parametric mapping, and standardized low-resolution electromagnetic tomography. The fusion approach was finally assessed on real epileptic data recorded from two patients showing IEDs simultaneously in EEG and MEG. Overall the localization of MEEG data using MEM provided better recovery of the source spatial extent, more sensitivity to the source depth and more accurate detection of the onset and propagation of IEDs than EEG or MEG alone. MEM was more accurate than the other methods. MEEG proved more robust than EEG and MEG for single IED localization in low signal-to-noise ratio conditions. We also showed that only few EEG electrodes are required to bring additional relevant information to MEG during MEM fusion.
Collapse
|
42
|
Pouryazdian S, Beheshti S, Krishnan S. Localization of brain activities using multiway analysis of EEG tensor via EMD and reassigned TF representation. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2015; 2015:113-116. [PMID: 26736213 DOI: 10.1109/embc.2015.7318313] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Electroencephalogram (EEG) is widely used for monitoring, diagnosis purposes and also for study of brain's physiological, mental and functional abnormalities. Processing of information by the brain is reflected in dynamical changes of the electrical activity in time, frequency, and space. EEG signal processing tends to describe and quantify these variations in such a way that they are localized in temporal, spectral and spatial domain. Here we use multi-way (Tensor) analysis for localizing the EEG events. We used EMD process for decomposing EEG into distinct oscillatory modes, which are then mapped to TF plane using the near optimal Reassigned Spectrogram. Temporal, Spatial and Spectral information of the Multichannel EEG are then used to generate a three-way Frequency-Time-Space EEG tensor. Exploiting EMD also enables us to detrend the EEG recordings. Simulation results on both synthetic and real EEG data show that tensor analysis greatly improve separation and localization of overlapping events in EEG and it could be effectively exploited for detecting and characterizing the evoked potentials.
Collapse
|
43
|
Understanding bimanual coordination across small time scales from an electrophysiological perspective. Neurosci Biobehav Rev 2014; 47:614-35. [DOI: 10.1016/j.neubiorev.2014.10.003] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2014] [Revised: 09/16/2014] [Accepted: 10/01/2014] [Indexed: 01/20/2023]
|
44
|
Irimia A, Van Horn JD. Epileptogenic focus localization in treatment-resistant post-traumatic epilepsy. J Clin Neurosci 2014; 22:627-31. [PMID: 25542591 DOI: 10.1016/j.jocn.2014.09.019] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2014] [Revised: 09/16/2014] [Accepted: 09/21/2014] [Indexed: 11/15/2022]
Abstract
Pharmacologically intractable post-traumatic epilepsy (PTE) is a major clinical challenge for patients with penetrating traumatic brain injury, where the risk for this condition remains very high even decades after injury. Although over 20 anti-epileptic drugs (AED) are in common use today, approximately one-third of epilepsy patients have drug-refractory seizures and even more have AED-related adverse effects which compromise life quality. Simultaneously, there have been repeated recommendations by radiologists and neuroimaging experts to incorporate localization based on electroencephalography (EEG) into the process of clinical decision making regarding PTE patients. Nevertheless, thus far, little progress has been accomplished towards the use of EEG as a reliable tool for locating epileptogenic foci prior to surgical resection. In this review, we discuss the epidemiology of pharmacologically resistant PTE, address the need for effective anti-epileptogenic treatments, and highlight recent progress in the development of noninvasive methods for the accurate localization of PTE foci for the purpose of neurosurgical intervention. These trends indicate the current emergence of promising methodologies for the noninvasive study of post-traumatic epileptogenesis and for the improved neurosurgical planning of epileptic foci resection.
Collapse
Affiliation(s)
- Andrei Irimia
- The Institute for Neuroimaging and Informatics, Keck School of Medicine, University of Southern California, 2001 North Soto Street, SSB1-102, Los Angeles, CA 90032, USA
| | - John Darrell Van Horn
- The Institute for Neuroimaging and Informatics, Keck School of Medicine, University of Southern California, 2001 North Soto Street, SSB1-102, Los Angeles, CA 90032, USA.
| |
Collapse
|
45
|
Jatoi MA, Kamel N, Malik AS, Faye I. EEG based brain source localization comparison of sLORETA and eLORETA. AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE 2014; 37:713-21. [PMID: 25359588 DOI: 10.1007/s13246-014-0308-3] [Citation(s) in RCA: 70] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2014] [Accepted: 10/23/2014] [Indexed: 11/26/2022]
Abstract
Human brain generates electromagnetic signals during certain activation inside the brain. The localization of the active sources which are responsible for such activation is termed as brain source localization. This process of source estimation with the help of EEG which is also known as EEG inverse problem is helpful to understand physiological, pathological, mental, functional abnormalities and cognitive behaviour of the brain. This understanding leads for the specification for diagnoses of various brain disorders such as epilepsy and tumour. Different approaches are devised to exactly localize the active sources with minimum localization error, less complexity and more validation which include minimum norm, low resolution brain electromagnetic tomography (LORETA), standardized LORETA, exact LORETA, Multiple Signal classifier, focal under determined system solution etc. This paper discusses and compares the ability of localizing the sources for two low resolution methods i.e., sLORETA and eLORETA respectively. The ERP data with visual stimulus is used for comparison at four different time instants for both methods (sLORETA and eLORETA) and then corresponding activation in terms of scalp map, slice view and cortex map is discussed.
Collapse
Affiliation(s)
- Munsif Ali Jatoi
- Department of Electrical and Electronic Engineering, Center for Intelligent Signals and Imaging Research, Universiti Teknologi PETRONAS, Tronoh, Perak, Malaysia,
| | | | | | | |
Collapse
|
46
|
Bathelt J, O'Reilly H, de Haan M. Cortical source analysis of high-density EEG recordings in children. J Vis Exp 2014:e51705. [PMID: 25045930 PMCID: PMC4209895 DOI: 10.3791/51705] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022] Open
Abstract
EEG is traditionally described as a neuroimaging technique with high temporal and low spatial resolution. Recent advances in biophysical modelling and signal processing make it possible to exploit information from other imaging modalities like structural MRI that provide high spatial resolution to overcome this constraint. This is especially useful for investigations that require high resolution in the temporal as well as spatial domain. In addition, due to the easy application and low cost of EEG recordings, EEG is often the method of choice when working with populations, such as young children, that do not tolerate functional MRI scans well. However, in order to investigate which neural substrates are involved, anatomical information from structural MRI is still needed. Most EEG analysis packages work with standard head models that are based on adult anatomy. The accuracy of these models when used for children is limited, because the composition and spatial configuration of head tissues changes dramatically over development. In the present paper, we provide an overview of our recent work in utilizing head models based on individual structural MRI scans or age specific head models to reconstruct the cortical generators of high density EEG. This article describes how EEG recordings are acquired, processed, and analyzed with pediatric populations at the London Baby Lab, including laboratory setup, task design, EEG preprocessing, MRI processing, and EEG channel level and source analysis.
Collapse
Affiliation(s)
- Joe Bathelt
- Cognitive Neuroscience & Neuropsychiatry Section, UCL Institute of Child Health;
| | - Helen O'Reilly
- Academic Division of Neonatology, Institute for Women's Health, University College London
| | - Michelle de Haan
- Cognitive Neuroscience & Neuropsychiatry Section, UCL Institute of Child Health
| |
Collapse
|
47
|
Perret C, Laganaro M. Dynamique de préparation de la réponse verbale et électroencéphalographie : une revue. ANNEE PSYCHOLOGIQUE 2013. [DOI: 10.3917/anpsy.134.0667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
|
48
|
Talja S, Alho K, Rinne T. Source analysis of event-related potentials during pitch discrimination and pitch memory tasks. Brain Topogr 2013; 28:445-58. [PMID: 24043402 DOI: 10.1007/s10548-013-0307-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2013] [Accepted: 08/10/2013] [Indexed: 11/26/2022]
Abstract
Our previous studies using fMRI have demonstrated that activations in human auditory cortex (AC) are strongly dependent on the characteristics of the task. The present study tested whether source estimation of scalp-recorded event-related potentials (ERPs) can be used to investigate task-dependent AC activations. Subjects were presented with frequency-varying two-part tones during pitch discrimination, pitch n-back memory, and visual tasks identical to our previous fMRI study (Rinne et al., J Neurosci 29:13338-13343, 2009). ERPs and their minimum-norm source estimates in AC were strongly modulated by task at 200-700 ms from tone onset. As in the fMRI study, the pitch discrimination and pitch memory tasks were associated with distinct AC activation patterns. In the pitch discrimination task, increased activity in the anterior AC was detected relatively late at 300-700 ms from tone onset. Therefore, this activity was probably not associated with enhanced pitch processing but rather with the actual discrimination process (comparison between the two parts of tone). Increased activity in more posterior areas associated with the pitch memory task, in turn, occurred at 200-700 ms suggesting that this activity was related to operations on pitch categories after pitch analysis was completed. Finally, decreased activity associated with the pitch memory task occurred at 150-300 ms consistent with the notion that, in the demanding pitch memory task, spectrotemporal analysis is actively halted as soon as category information has been obtained. These results demonstrate that ERP source analysis can be used to complement fMRI to investigate task-dependent activations of human AC.
Collapse
Affiliation(s)
- Suvi Talja
- Institute of Behavioural Sciences, University of Helsinki, PO Box 9, 00014, Helsinki, Finland,
| | | | | |
Collapse
|
49
|
Brock C, Graversen C, Frøkjaer JB, Søfteland E, Valeriani M, Drewes AM. Peripheral and central nervous contribution to gastrointestinal symptoms in diabetic patients with autonomic neuropathy. Eur J Pain 2012; 17:820-31. [PMID: 23239083 DOI: 10.1002/j.1532-2149.2012.00254.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/31/2012] [Indexed: 12/19/2022]
Abstract
BACKGROUND & AIMS Long-term diabetes mellitus (DM) has been associated with neuronal changes in the enteric, peripheral and/or central nervous system. Moreover, abnormal visceral sensation and gastrointestinal (GI) symptoms are seen in up to 75% of patients. To explore the role of diabetic autonomic neuropathy (DAN) in patients with long-standing DM, we investigated psychophysical responses and neuronal activity recorded as evoked brain potentials and dipolar source modelling. METHODS Fifteen healthy volunteers and 14 type-1 DM patients with DAN were assessed with a symptom score index characterizing upper GI abnormalities. Multichannel (62) electroencephalography was recorded during painful electrical stimulation of the lower oesophagus. Brain activity to painful stimulations was modelled using Brain Electrical Source Analysis (besa). RESULTS Diabetic patients had higher stimulus intensities to evoke painful sensation (p ≤ 0.001), longer latencies of N2 and P2 components (both p ≤ 0.001), and lower amplitudes of P1-N2 and N2-P2 complexes (p ≤ 0.001; p = 0.02). Inverse modelling of brain sources showed deeper bilateral insular dipolar source localization (p = 0.002). Symptom score index was negatively correlated with the depth of insular activity (p = 0.004) and positively correlated with insular dipole strength (p = 0.03). CONCLUSION DM patients show peripheral and central neuroplastic changes. Moreover, the role of abnormal insular processing may explain the appearance and persistence of GI symptoms related to DAN. This enhanced understanding of DAN may have future clinical and therapeutical implications.
Collapse
Affiliation(s)
- C Brock
- Mech-Sense, Department of Gastroenterology & Hepatology, Aalborg Hospital, Aarhus University Hospital, Aalborg, Denmark.
| | | | | | | | | | | |
Collapse
|
50
|
Influences of skull segmentation inaccuracies on EEG source analysis. Neuroimage 2012; 62:418-31. [DOI: 10.1016/j.neuroimage.2012.05.006] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2011] [Revised: 03/09/2012] [Accepted: 05/04/2012] [Indexed: 11/19/2022] Open
|