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Chamness LM, Zelt NB, Harrington HR, Kuntz CP, Bender BJ, Penn WD, Ziarek JJ, Meiler J, Schlebach JP. Molecular basis for the evolved instability of a human G-protein coupled receptor. Cell Rep 2021; 37:110046. [PMID: 34818554 PMCID: PMC8865034 DOI: 10.1016/j.celrep.2021.110046] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Revised: 08/06/2021] [Accepted: 11/01/2021] [Indexed: 11/26/2022] Open
Abstract
Membrane proteins are prone to misfolding and degradation. This is particularly true for mammalian forms of the gonadotropin-releasing hormone receptor (GnRHR). Although they function at the plasma membrane, mammalian GnRHRs accumulate within the secretory pathway. Their apparent instability is believed to have evolved through selection for attenuated GnRHR activity. Nevertheless, the molecular basis of this adaptation remains unclear. We show that adaptation coincides with a C-terminal truncation that compromises the translocon-mediated membrane integration of its seventh transmembrane domain (TM7). We also identify a series of polar residues in mammalian GnRHRs that compromise the membrane integration of TM2 and TM6. Reverting a lipid-exposed polar residue in TM6 to an ancestral hydrophobic residue restores expression with no impact on function. Evolutionary trends suggest variations in the polarity of this residue track with reproductive phenotypes. Our findings suggest that the marginal energetics of cotranslational folding can be exploited to tune membrane protein fitness. Integral membrane proteins are prone to misfolding, especially mammalian gonadotropin-releasing hormone receptors (GnRHRs). Chamness et al. show that the evolved instability of mammalian GnRHRs stems from adaptive modifications that disrupt translocon-mediated membrane integration, suggesting that membrane protein misfolding can be exploited to tune fitness.
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Affiliation(s)
- Laura M Chamness
- Department of Chemistry, Indiana University, Bloomington, IN 47405, USA
| | - Nathan B Zelt
- Department of Chemistry, Indiana University, Bloomington, IN 47405, USA
| | | | - Charles P Kuntz
- Department of Chemistry, Indiana University, Bloomington, IN 47405, USA
| | - Brian J Bender
- Department of Chemistry, Vanderbilt University, Nashville, TN 49795, USA
| | - Wesley D Penn
- Department of Chemistry, Indiana University, Bloomington, IN 47405, USA
| | - Joshua J Ziarek
- Department of Molecular and Cellular Biochemistry, Indiana University, Bloomington, IN 47405, USA
| | - Jens Meiler
- Department of Chemistry, Vanderbilt University, Nashville, TN 49795, USA; Institut for Drug Development, Leipzig University, Leipzig, SAC, Germany
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Evolution of Reproductive Life History in Mammals and the Associated Change of Functional Constraints. Genes (Basel) 2021; 12:genes12050740. [PMID: 34068942 PMCID: PMC8157036 DOI: 10.3390/genes12050740] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2021] [Revised: 05/02/2021] [Accepted: 05/11/2021] [Indexed: 12/13/2022] Open
Abstract
Phylogenetic trees based on multiple genomic loci enable us to estimate the evolution of functional constraints that operate on genes based on lineage-specific fluctuation of the evolutionary rate at particular gene loci, “gene–branch interactions”. Using this information as predictors, our previous work inferred that the common ancestor of placental mammals was nocturnal, insectivorous, solitary, and bred seasonally. Here, we added seven new continuous traits including lifespan, bodyweight, and five reproduction-related traits and inferred the coevolution network of 14 core life history traits for 89 mammals. In this network, bodyweight and lifespan are not directly connected to each other; instead, their correlation is due to both of them coevolving with gestation period. Diurnal mammals are more likely to be monogamous than nocturnal mammals, while arboreal mammals tend to have a smaller litter size than terrestrial mammals. Coevolution between diet and the seasonal breeding behavior test shows that year-round breeding preceded the dietary change to omnivory, while seasonal breeding preceded the dietary change to carnivory. We also discuss the evolution of reproductive strategy of mammals. Genes selected as predictors were identified as well; for example, genes function as tumor suppressor were selected as predictors of weaning age.
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3
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Wood BM, Millar RS, Wright N, Baumgartner J, Holmquist H, Kiffner C. Hunter-Gatherers in context: Mammal community composition in a northern Tanzania landscape used by Hadza foragers and Datoga pastoralists. PLoS One 2021; 16:e0251076. [PMID: 33989291 PMCID: PMC8121365 DOI: 10.1371/journal.pone.0251076] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2020] [Accepted: 04/20/2021] [Indexed: 11/21/2022] Open
Abstract
In many regions of sub Saharan Africa large mammals occur in human-dominated areas, yet their community composition and abundance have rarely been described in areas occupied by traditional hunter-gatherers and pastoralists. Surveys of mammal populations in such areas provide important measures of biodiversity and provide ecological context for understanding hunting practices. Using a sampling grid centered on a Hadza hunter-gatherer camp and covering 36 km2 of semi-arid savannah in northern Tanzania, we assessed mammals using camera traps (n = 19 stations) for c. 5 months (2,182 trap nights). In the study area (Tli’ika in the Hadza language), we recorded 36 wild mammal species. Rarefaction curves suggest that sampling effort was sufficient to capture mammal species richness, yet some species known to occur at low densities in the wider area (e.g. African lions, wildebeest) were not detected. Relative abundance indices of wildlife species varied by c. three orders of magnitude, from a mean of 0.04 (African wild dog) to 20.34 capture events per 100 trap-nights (Kirk’s dik dik). To contextualize the relative abundance of wildlife in the study area, we compared our study’s data to comparable camera trap data collected in a fully protected area of northern Tanzania with similar rainfall (Lake Manyara National Park). Raw data and negative binomial regression analyses show that wild herbivores and wild carnivores were generally detected in the national park at higher rates than in the Hadza-occupied region. Livestock were notably absent from the national park, but were detected at high levels in Tli’ika, and cattle was the second most frequently detected species in the Hadza-used area. We discuss how these data inform current conservation efforts, studies of Hadza hunting, and models of hunter-gatherer foraging ecology and diet.
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Affiliation(s)
- Brian M. Wood
- Department of Human Behavior, Ecology and Culture, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
- Department of Anthropology, University of California, Los Angeles, CA, United States of America
- * E-mail: (BMW); (CK)
| | | | | | | | | | - Christian Kiffner
- Department of Human Behavior, Ecology and Culture, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
- Center For Wildlife Management Studies, The School For Field Studies, Karatu, Tanzania
- * E-mail: (BMW); (CK)
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Todorov OS, Blomberg SP, Goswami A, Sears K, Drhlík P, Peters J, Weisbecker V. Testing hypotheses of marsupial brain size variation using phylogenetic multiple imputations and a Bayesian comparative framework. Proc Biol Sci 2021; 288:20210394. [PMID: 33784860 PMCID: PMC8059968 DOI: 10.1098/rspb.2021.0394] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Considerable controversy exists about which hypotheses and variables best explain mammalian brain size variation. We use a new, high-coverage dataset of marsupial brain and body sizes, and the first phylogenetically imputed full datasets of 16 predictor variables, to model the prevalent hypotheses explaining brain size evolution using phylogenetically corrected Bayesian generalized linear mixed-effects modelling. Despite this comprehensive analysis, litter size emerges as the only significant predictor. Marsupials differ from the more frequently studied placentals in displaying a much lower diversity of reproductive traits, which are known to interact extensively with many behavioural and ecological predictors of brain size. Our results therefore suggest that studies of relative brain size evolution in placental mammals may require targeted co-analysis or adjustment of reproductive parameters like litter size, weaning age or gestation length. This supports suggestions that significant associations between behavioural or ecological variables with relative brain size may be due to a confounding influence of the extensive reproductive diversity of placental mammals.
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Affiliation(s)
- Orlin S Todorov
- School of Biological Sciences, The University of Queensland, St Lucia, Queensland, Australia
| | - Simone P Blomberg
- School of Biological Sciences, The University of Queensland, St Lucia, Queensland, Australia
| | - Anjali Goswami
- Genetics, Evolution, and Environment Department, University College London, UK.,Department of Life Sciences, Natural History Museum, London, UK
| | - Karen Sears
- Department of Ecology and Evolutionary Biology, College of Life Sciences, University of California Los Angeles, CA, USA
| | - Patrik Drhlík
- Faculty of Mechatronics, Informatics and Interdisciplinary Studies, Technical University of Liberec, Czechia
| | - James Peters
- Department of Animal Biology, University of Illinois at Urbana Champaign, USA
| | - Vera Weisbecker
- School of Biological Sciences, The University of Queensland, St Lucia, Queensland, Australia.,College of Science and Engineering, Flinders University, Australia
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5
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Can Dogs Limbo? Dogs' Perception of Affordances for Negotiating an Opening. Animals (Basel) 2021; 11:ani11030620. [PMID: 33652857 PMCID: PMC7996957 DOI: 10.3390/ani11030620] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Revised: 02/23/2021] [Accepted: 02/24/2021] [Indexed: 12/01/2022] Open
Abstract
Simple Summary Recent behavioral research with domestic dogs has focused largely on their social cognition: how they interact with and interpret both other dogs and humans. Less well studied are the various aspects of their perceptual experience which might provide knowledge of how they understand the non-social world and themselves. In two studies, we look at how dogs navigate their environment. We first set up a situation to test whether dogs understand when they are too big to go through an opening; we also look at how they adjust their bodies to increasingly smaller (shorter) openings. We then also look at how dogs navigate an opening when their body width is effectively increased by their holding a stick in their mouth. We find that dogs show more hesitation approaching openings that are too small than ones through which they comfortably fit. Dogs of all sizes also change their behavior in a uniform way to negotiate short openings. When holding a stick, dogs did not initially change their behavior but are able to negotiate through an opening with experience. Researching how dogs navigate through a changing environment may be a fruitful way to begin to understand their sense of themselves. Abstract Very little research has focused on canines’ understanding of their own size, and their ability to apply this understanding to their surroundings. The current study tests domestic dogs’ judgment of their body size in relation to a changing environment in two novel experimental situations: when encountering an opening of decreasing height (Study 1) and when negotiating an opening when carrying a stick in their mouth (Study 2). We hypothesized that if dogs understand their own body size, they will accurately judge when an opening is too small for their body to fit through, showing longer latencies to approach the smaller openings and adjusting their body appropriately to get through—although this judgment may not extend to when their body size is effectively increased. In line with these hypotheses, we found that the latency for subjects to reach an aperture they could easily fit through was significantly shorter than to one which was almost too small to fit through. We also found that the order of subjects’ adjustments to negotiate an aperture was invariant across individuals, indicating that dogs’ perception of affordances to fit through an aperture is action-scaled. Preliminary results suggest that dogs’ approach behavior is different when a horizontal appendage is introduced, but that dogs were able to alter their behavior with experience. These results are consistent with the hypothesis that dogs understand their own body size and the affordances of their changing environment.
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Blackburn DG. Functional morphology, diversity, and evolution of yolk processing specializations in embryonic reptiles and birds. J Morphol 2020; 282:995-1014. [PMID: 32960458 DOI: 10.1002/jmor.21267] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2020] [Revised: 08/24/2020] [Accepted: 09/08/2020] [Indexed: 12/21/2022]
Abstract
Evolution of the terrestrial, amniotic egg of vertebrates required new mechanisms by which yolk material could be processed for embryonic use. Recent studies on each of the major extant reptile groups have revealed elaborate morphological specializations for yolk processing, features that differ dramatically from those of birds. In the avian pattern, liquid yolk is housed in a yolk sac whose endodermal lining absorbs and digests yolk material and sends resultant nutrients into the blood circulation. In snakes, lizards, turtles, and crocodilians, as documented herein, the yolk sac becomes invaded by endodermal cells that proliferate and phagocytose yolk material. Blood vessels then invade, and the endodermal cells become arranged around them, forming elongated "spaghetti-like" strands that fill the yolk sac cavity. This pattern provides an effective means by which yolk material is cellularized, digested, and transported by vitelline vessels to the developing embryo. Phylogenetically, the (non-avian) "reptilian" pattern was ancestral for sauropsids and was modified or replaced in ancestors to birds. This review postulates that evolution of the "avian" pattern involved increased reliance on extracellular digestion of yolk, allowing embryonic development to occur more rapidly than in typical reptiles. Comparative studies of yolk processing that draw on morphological, biochemical, molecular approaches are needed to explain how and why the "reptilian" pattern was replaced in birds or their archosaurian ancestors.
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Affiliation(s)
- Daniel G Blackburn
- Department of Biology, Electron Microscopy Center, Trinity College, Hartford, Connecticut, USA
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Gérard M, Martinet B, Maebe K, Marshall L, Smagghe G, Vereecken NJ, Vray S, Rasmont P, Michez D. Shift in size of bumblebee queens over the last century. GLOBAL CHANGE BIOLOGY 2020; 26:1185-1195. [PMID: 31665557 DOI: 10.1111/gcb.14890] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2019] [Accepted: 10/24/2019] [Indexed: 06/10/2023]
Abstract
Species can respond differently when facing environmental changes, such as by shifting their geographical ranges or through plastic or adaptive modifications to new environmental conditions. Phenotypic modifications related to environmental factors have been mainly explored along latitudinal gradients, but they are relatively understudied through time despite their importance for key ecological interactions. Here we hypothesize that the average bumblebee queen body size has changed in Belgium during the last century. Based on historical and contemporary databases, we first tested if queen body sizes changed during the last century at the intraspecific level among four common bumblebee species and if it could be linked to global warming and/or habitat fragmentation as well as by the replacement by individuals from new populations. Then, we assessed body size changes at the community level, among 22 species, taking into account species population trends (i.e. increasing, stable or decreasing relative abundance). Our results show that the average queen body size of all four bumblebee species increased over the last century. This size increase was significantly correlated to global warming and habitat fragmentation, but not explained by changes in the population genetic structure (i.e. colonization). At the community level, species with stable or increasing relative abundance tend to be larger than declining species. Contrary to theoretical expectations from Bergmann's rule (i.e. increasing body size in colder climates), temperature does not seem to be the main driver of bumblebee body size during the last century as we observed the opposite body size trend. However, agricultural intensification and habitat fragmentation could be alternative mechanisms that shape body size clines. This study stresses the importance of considering alternative global change factors when assessing body size change.
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Affiliation(s)
- Maxence Gérard
- Laboratoire de Zoologie, Research Institute of Biosciences, University of Mons, Mons, Belgium
| | - Baptiste Martinet
- Laboratoire de Zoologie, Research Institute of Biosciences, University of Mons, Mons, Belgium
| | - Kevin Maebe
- Department Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium
| | - Leon Marshall
- Agroecology Lab, Université libre de Bruxelles (ULB), Brussels, Belgium
- Naturalis Biodiversity Center, Leiden, The Netherlands
| | - Guy Smagghe
- Department Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium
| | | | - Sarah Vray
- Laboratoire de Zoologie, Research Institute of Biosciences, University of Mons, Mons, Belgium
- Environmental Research and Innovation Department, Luxembourg Institute of Science and Technology, Belvaux, Luxembourg
| | - Pierre Rasmont
- Laboratoire de Zoologie, Research Institute of Biosciences, University of Mons, Mons, Belgium
| | - Denis Michez
- Laboratoire de Zoologie, Research Institute of Biosciences, University of Mons, Mons, Belgium
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Hallmann K, Griebeler EM. An identification of invariants in life history traits of amphibians and reptiles. Ecol Evol 2020; 10:1233-1251. [PMID: 32076510 PMCID: PMC7029084 DOI: 10.1002/ece3.5978] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2018] [Revised: 12/01/2019] [Accepted: 12/06/2019] [Indexed: 11/11/2022] Open
Abstract
While many morphological, physiological, and ecological characteristics of organisms scale with body size, some do not change under size transformation. They are called invariant. A recent study recommended five criteria for identifying invariant traits. These are based on that a trait exhibits a unimodal central tendency and varies over a limited range with body mass (type I), or that it does not vary systematically with body mass (type II). We methodologically improved these criteria and then applied them to life history traits of amphibians, Anura, Caudata (eleven traits), and reptiles (eight traits). The numbers of invariant traits identified by criteria differed across amphibian orders and between amphibians and reptiles. Reproductive output (maximum number of reproductive events per year), incubation time, length of larval period, and metamorphosis size were type I and II invariant across amphibians. In both amphibian orders, reproductive output and metamorphosis size were type I and II invariant. In Anura, incubation time and length of larval period and in Caudata, incubation time were further type II invariant. In reptiles, however, only number of clutches per year was invariant (type II). All these differences could reflect that in reptiles body size and in amphibians, Anura, and Caudata metamorphosis (neotenic species go not through it) and the trend toward independence of egg and larval development from water additionally constrained life history evolution. We further demonstrate that all invariance criteria worked for amphibian and reptilian life history traits, although we corroborated some known and identified new limitations to their application.
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Affiliation(s)
- Konstantin Hallmann
- Institute of Organismic and Molecular Evolution – Evolutionary EcologyJohannes Gutenberg‐University MainzMainzGermany
| | - Eva Maria Griebeler
- Institute of Organismic and Molecular Evolution – Evolutionary EcologyJohannes Gutenberg‐University MainzMainzGermany
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9
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Changes in life history characteristics of Porcellio laevis (Isopoda: Oniscidea) along a cadmium pollution gradient in Sfax (Central Tunisia). Biologia (Bratisl) 2019. [DOI: 10.2478/s11756-019-00252-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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10
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Hallmann K, Griebeler EM. An exploration of differences in the scaling of life history traits with body mass within reptiles and between amniotes. Ecol Evol 2018; 8:5480-5494. [PMID: 29938067 PMCID: PMC6010814 DOI: 10.1002/ece3.4069] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2017] [Revised: 03/11/2018] [Accepted: 03/23/2018] [Indexed: 12/02/2022] Open
Abstract
Allometric relationships linking species characteristics to body size or mass (scaling) are important in biology. However, studies on the scaling of life history traits in the reptiles (the nonavian Reptilia) are rather scarce, especially for the clades Crocodilia, Testudines, and Rhynchocephalia (single extant species, the tuatara). Previous studies on the scaling of reptilian life history traits indicated that they differ from those seen in the other amniotes (mammals and birds), but so far most comparative studies used small species samples and also not phylogenetically informed analyses. Here, we analyzed the scaling of nine life history traits with adult body mass for crocodiles (n = 22), squamates (n = 294), turtles (n = 52), and reptiles (n = 369). We used for the first time a phylogenetically informed approach for crocodiles, turtles, and the whole group of reptiles. We explored differences in scaling relationships between the reptilian clades Crocodilia, Squamata, and Testudines as well as differences between reptiles, mammals, and birds. Finally, we applied our scaling relationships, in order to gain new insights into the degree of the exceptionality of the tuatara's life history within reptiles. We observed for none of the life history traits studied any difference in their scaling with body mass between squamates, crocodiles, and turtles, except for clutch size and egg weight showing small differences between these groups. Compared to birds and mammals, scaling relationships of reptiles were similar for time-related traits, but they differed for reproductive traits. The tuatara's life history is more similar to that of a similar-sized turtle or crocodile than to a squamate.
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Affiliation(s)
- Konstantin Hallmann
- Institute of Organismic and Molecular Evolution – Evolutionary EcologyJohannes Gutenberg‐University MainzMainzRhineland‐PalatinateGermany
| | - Eva Maria Griebeler
- Institute of Organismic and Molecular Evolution – Evolutionary EcologyJohannes Gutenberg‐University MainzMainzRhineland‐PalatinateGermany
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Werner J, Griebeler EM. Was endothermy in amniotes induced by an early stop in growth during ontogeny? Naturwissenschaften 2017; 104:90. [PMID: 29022052 DOI: 10.1007/s00114-017-1513-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2017] [Revised: 10/03/2017] [Accepted: 10/05/2017] [Indexed: 01/19/2023]
Abstract
Endothermy and its evolution are still an unresolved issue. Here, we present a model which transforms an ectothermic amniote (ancestor) into a derived amniote (descendant) showing many characteristics seen in extant endothermic birds and mammals. Consistent with the fossil record within the ancestral lineages of birds and mammals, the model assumes that mutations in genes which get active during ontogeny and affect body growth resulted in a reduced asymptotic body size and an early growth stop of the descendant. We show that such a postulated early growth stop in the descendant simultaneously increases the growth rate and metabolic rate, and also changes six life history traits (offspring mass, annual clutch/litter mass, number of offspring per year, age and mass at which sexual maturity is reached, age at which the individual is fully grown) of the descendant compared to a similar-sized ancestor. All these changes coincide with known differences between recent ectothermic and endothermic amniotes. We also elaborate many other differences and similarities in biological characteristics supporting the early growth stop. An early stop in growth during ontogeny thus could have played a key role in the evolution of endothermy within the reptilia and therapsids. It generated variability in characteristics of ancestral ectotherms, which was subject to natural selection in the past and resulted in many adaptations linked to endothermy in today's birds and mammals.
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Affiliation(s)
- Jan Werner
- Institute of Organismic and Molecular Evolution, Evolutionary Ecology, Johannes Gutenberg-Universität Mainz, P.O. Box 3980, 55099, Mainz, Germany.
| | - Eva Maria Griebeler
- Institute of Organismic and Molecular Evolution, Evolutionary Ecology, Johannes Gutenberg-Universität Mainz, P.O. Box 3980, 55099, Mainz, Germany
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12
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Lee SA. Embryonic metabolism of the ornithischian dinosaurs Protoceratops andrewsi and Hypacrosaurus stebingeri and implications for calculations of dinosaur egg incubation times. Phys Rev E 2017; 95:042407. [PMID: 28505802 DOI: 10.1103/physreve.95.042407] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2017] [Indexed: 06/07/2023]
Abstract
The embryonic metabolisms of the ornithischian dinosaurs Protoceratops andrewsi and Hypacrosaurus stebingeri have been determined and are in the range observed in extant reptiles. The average value of the measured embryonic metabolic rates for P. andrewsi and H. stebingeri are then used to calculate the incubation times for 21 dinosaurs from both Sauischia and Ornithischia using a mass growth model based on conservation of energy. The calculated incubation times vary from about 70 days for Archaeopteryx lithographica to about 180 days for Alamosaurus sanjuanensis. Such long incubation times seem unlikely, particularly for the sauropods and large theropods. Incubation times are also predicted with the assumption that the saurischian dinosaurs had embryonic metabolisms in the range observed in extant birds.
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Affiliation(s)
- Scott A Lee
- Department of Physics and Astronomy, University of Toledo, Toledo, Ohio 43606, USA
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13
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Erickson GM, Zelenitsky DK, Kay DI, Norell MA. Dinosaur incubation periods directly determined from growth-line counts in embryonic teeth show reptilian-grade development. Proc Natl Acad Sci U S A 2017; 114:540-545. [PMID: 28049837 PMCID: PMC5255600 DOI: 10.1073/pnas.1613716114] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Birds stand out from other egg-laying amniotes by producing relatively small numbers of large eggs with very short incubation periods (average 11-85 d). This aspect promotes high survivorship by limiting exposure to predation and environmental perturbation, allows for larger more fit young, and facilitates rapid attainment of adult size. Birds are living dinosaurs; their rapid development has been considered to reflect the primitive dinosaurian condition. Here, nonavian dinosaurian incubation periods in both small and large ornithischian taxa are empirically determined through growth-line counts in embryonic teeth. Our results show unexpectedly slow incubation (2.8 and 5.8 mo) like those of outgroup reptiles. Developmental and physiological constraints would have rendered tooth formation and incubation inherently slow in other dinosaur lineages and basal birds. The capacity to determine incubation periods in extinct egg-laying amniotes has implications for dinosaurian embryology, life history strategies, and survivorship across the Cretaceous-Paleogene mass extinction event.
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Affiliation(s)
- Gregory M Erickson
- Department of Biological Science, Florida State University, Tallahassee, FL 32306-4295;
| | - Darla K Zelenitsky
- Department of Geoscience, University of Calgary, Calgary, AB, Canada T2N 1N4
| | - David Ian Kay
- Department of Biological Science, Florida State University, Tallahassee, FL 32306-4295
| | - Mark A Norell
- Division of Paleontology, American Museum of Natural History, New York, NY 10024
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14
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Lee SA. Incubation times of dinosaur eggs via embryonic metabolism. Phys Rev E 2016; 94:022402. [PMID: 27627330 DOI: 10.1103/physreve.94.022402] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2016] [Indexed: 11/07/2022]
Abstract
The incubation times for the eggs of 21 dinosaurs are determined from an estimate of their embyronic metabolic rate and the mass of the hatchlings via a mass growth model based on conservation of energy. Embryos in extant birds and crocodiles are studied in order to determine the best model for embryonic metabolism and growth. These results are used to develop a theoretical model that predicts the incubation times of an egg. This model is applied to dinosaur eggs and provides a unique window into dinosaur reproduction. The dinosaurs studied come from both Saurischia and Ornithischia. The incubation times vary from about 28 days for Archaeopteryx lithographica to about 76 days for Alamosaurus sanjuanensis.
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Affiliation(s)
- Scott A Lee
- Department of Physics and Astronomy, University of Toledo, Toledo, Ohio 43606, USA
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15
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Vermeij GJ. Gigantism and Its Implications for the History of Life. PLoS One 2016; 11:e0146092. [PMID: 26771527 PMCID: PMC4714876 DOI: 10.1371/journal.pone.0146092] [Citation(s) in RCA: 79] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2015] [Accepted: 12/14/2015] [Indexed: 11/19/2022] Open
Abstract
Gigantism-very large body size-is an ecologically important trait associated with competitive superiority. Although it has been studied in particular cases, the general conditions for the evolution and maintenance of gigantism remain obscure. I compiled sizes and dates for the largest species in 3 terrestrial and 7 marine trophic and habitat categories of animals from throughout the Phanerozoic. The largest species (global giants) in all categories are of post-Paleozoic age. Gigantism at this level appeared tens to hundreds of millions of years after mass extinctions and long after the origins of clades in which it evolved. Marine gigantism correlates with high planktic or seafloor productivity, but on land the correspondence between productivity and gigantism is weak at best. All global giants are aerobically active animals, not gentle giants with low metabolic demands. Oxygen concentration in the atmosphere correlates with gigantism in the Paleozoic but not thereafter, likely because of the elaboration of efficient gas-exchange systems in clades containing giants. Although temperature and habitat size are important in the evolution of very large size in some cases, the most important (and rare) enabling circumstance is a highly developed ecological infrastructure in which essential resources are abundant and effectively recycled and reused, permitting activity levels to increase and setting the stage for gigantic animals to evolve. Gigantism as a hallmark of competitive superiority appears to have lost its luster on land after the Mesozoic in favor of alternative means of achieving dominance, especially including social organization and coordinated food-gathering.
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Affiliation(s)
- Geerat J. Vermeij
- Department of Earth and Planetary Sciences, University of California, One Shields Avenue, Davis, California, 95616, United States of America
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Hechenleitner EM, Grellet-Tinner G, Fiorelli LE. What do giant titanosaur dinosaurs and modern Australasian megapodes have in common? PeerJ 2015; 3:e1341. [PMID: 26623184 PMCID: PMC4662581 DOI: 10.7717/peerj.1341] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2015] [Accepted: 09/30/2015] [Indexed: 11/30/2022] Open
Abstract
Titanosauria is a globally distributed clade of sometimes extremely large Mesozoic herbivorous sauropod dinosaurs. On the basis of current evidence these giant dinosaurs seem to have reproduced in specific and localized nesting sites. However, no investigations have been performed to understand the possible ecological and geological biases that acted for the selection of these nesting sites worldwide. In this study, observations were performed on the best-known Cretaceous nesting sites around the world. Our observations strongly suggest their eggs were incubated with environmental sources of heat, in burial conditions. Taking into account the clutch composition and geometry, the nature and properties of the sediments, the eggshells’ structures and conductance, it would appear that titanosaurs adopted nesting behaviors comparable to the modern Australasian megapodes, using burrow-nesting in diverse media and mound-building strategies.
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Affiliation(s)
- E Martín Hechenleitner
- Department of Geosciences, Centro Regional de Investigaciones Científicas y Transferencia Tecnológica de La Rioja (CRILAR-CONICET) , La Rioja , Argentina
| | - Gerald Grellet-Tinner
- Department of Geosciences, Centro Regional de Investigaciones Científicas y Transferencia Tecnológica de La Rioja (CRILAR-CONICET) , La Rioja , Argentina ; Orcas Island Historical Museum , Eastsound, Washington , United States
| | - Lucas E Fiorelli
- Department of Geosciences, Centro Regional de Investigaciones Científicas y Transferencia Tecnológica de La Rioja (CRILAR-CONICET) , La Rioja , Argentina
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Lee SA. Metabolism of dinosaurs as determined from their growth. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:032706. [PMID: 26465497 DOI: 10.1103/physreve.92.032706] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2015] [Indexed: 06/05/2023]
Abstract
A model based on cellular properties is used to analyze the mass growth curves of 20 dinosaurs. This analysis yields the first measurement of the average cellular metabolism of dinosaurs. The organismal metabolism is also determined. The cellular metabolism of dinosaurs is found to decrease with mass at a slower rate than is observed in extant animals. The organismal metabolism increases with the mass of the dinosaur. These results come from both the Saurischia and Ornithischia branches of Dinosauria, suggesting that the observed metabolic features were common to all dinosaurs. The results from dinosaurs are compared to data from extant placental and marsupial mammals, a monotreme, and altricial and precocial birds, reptiles, and fish. Dinosaurs had cellular and organismal metabolisms in the range observed in extant mesotherms.
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Affiliation(s)
- Scott A Lee
- Department of Physics and Astronomy, University of Toledo, Toledo, Ohio 43606, USA
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Codron D, Carbone C, Clauss M. Ecological interactions in dinosaur communities: influences of small offspring and complex ontogenetic life histories. PLoS One 2013; 8:e77110. [PMID: 24204749 PMCID: PMC3812983 DOI: 10.1371/journal.pone.0077110] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2013] [Accepted: 09/04/2013] [Indexed: 11/23/2022] Open
Abstract
Because egg-laying meant that even the largest dinosaurs gave birth to very small offspring, they had to pass through multiple ontogenetic life stages to adulthood. Dinosaurs’ successors as the dominant terrestrial vertebrate life form, the mammals, give birth to live young, and have much larger offspring and less complex ontogenetic histories. The larger number of juveniles in dinosaur as compared to mammal ecosystems represents both a greater diversity of food available to predators, and competitors for similar-sized individuals of sympatric species. Models of population abundances across different-sized species of dinosaurs and mammals, based on simulated ecological life tables, are employed to investigate how differences in predation and competition pressure influenced dinosaur communities. Higher small- to medium-sized prey availability leads to a normal body mass-species richness (M-S) distribution of carnivorous dinosaurs (as found in the theropod fossil record), in contrast to the right-skewed M-S distribution of carnivorous mammals (as found living members of the order Carnivora). Higher levels of interspecific competition leads to a left-skewed M-S distribution in herbivorous dinosaurs (as found in sauropods and ornithopods), in contrast to the normal M-S distribution of large herbivorous mammals. Thus, our models suggest that differences in reproductive strategy, and consequently ontogeny, explain observed differences in community structure between dinosaur and mammal faunas. Models also show that the largest dinosaurian predators could have subsisted on similar-sized prey by including younger life stages of the largest herbivore species, but that large predators likely avoided prey much smaller than themselves because, despite predicted higher abundances of smaller than larger-bodied prey, contributions of small prey to biomass intake would be insufficient to satisfy meat requirements. A lack of large carnivores feeding on small prey exists in mammals larger than 21.5 kg, and it seems a similar minimum prey-size threshold could have affected dinosaurs as well.
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Affiliation(s)
- Daryl Codron
- Clinic for Zoo Animals, Exotic Pets and Wildlife, Vetsuisse Faculty, University of Zürich, Zürich, Switzerland
- Florisbad Quaternary Research, National Museum, Bloemfontein, South Africa
- School of Biological and Conservation Sciences, University of KwaZulu-Natal, Pietermaritzburg, South Africa
- Department of Anthropology, University of Colorado at Boulder, Boulder, Colorado, United States of America
- * E-mail:
| | - Chris Carbone
- Institute of Zoology, Zoological Society of London, London, United Kingdom
| | - Marcus Clauss
- Clinic for Zoo Animals, Exotic Pets and Wildlife, Vetsuisse Faculty, University of Zürich, Zürich, Switzerland
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Sander PM. An evolutionary cascade model for sauropod dinosaur gigantism--overview, update and tests. PLoS One 2013; 8:e78573. [PMID: 24205267 PMCID: PMC3812984 DOI: 10.1371/journal.pone.0078573] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2013] [Accepted: 09/20/2013] [Indexed: 11/23/2022] Open
Abstract
Sauropod dinosaurs are a group of herbivorous dinosaurs which exceeded all other terrestrial vertebrates in mean and maximal body size. Sauropod dinosaurs were also the most successful and long-lived herbivorous tetrapod clade, but no abiological factors such as global environmental parameters conducive to their gigantism can be identified. These facts justify major efforts by evolutionary biologists and paleontologists to understand sauropods as living animals and to explain their evolutionary success and uniquely gigantic body size. Contributions to this research program have come from many fields and can be synthesized into a biological evolutionary cascade model of sauropod dinosaur gigantism (sauropod gigantism ECM). This review focuses on the sauropod gigantism ECM, providing an updated version based on the contributions to the PLoS ONE sauropod gigantism collection and on other very recent published evidence. The model consist of five separate evolutionary cascades ("Reproduction", "Feeding", "Head and neck", "Avian-style lung", and "Metabolism"). Each cascade starts with observed or inferred basal traits that either may be plesiomorphic or derived at the level of Sauropoda. Each trait confers hypothetical selective advantages which permit the evolution of the next trait. Feedback loops in the ECM consist of selective advantages originating from traits higher in the cascades but affecting lower traits. All cascades end in the trait "Very high body mass". Each cascade is linked to at least one other cascade. Important plesiomorphic traits of sauropod dinosaurs that entered the model were ovipary as well as no mastication of food. Important evolutionary innovations (derived traits) were an avian-style respiratory system and an elevated basal metabolic rate. Comparison with other tetrapod lineages identifies factors limiting body size.
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Affiliation(s)
- P. Martin Sander
- Steinmann Institute of Geology, Mineralogy and Paleontology, University of Bonn, Bonn, Germany
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Werner J, Griebeler EM. New insights into non-avian dinosaur reproduction and their evolutionary and ecological implications: linking fossil evidence to allometries of extant close relatives. PLoS One 2013; 8:e72862. [PMID: 23991160 PMCID: PMC3749170 DOI: 10.1371/journal.pone.0072862] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2013] [Accepted: 07/15/2013] [Indexed: 11/23/2022] Open
Abstract
It has been hypothesized that a high reproductive output contributes to the unique gigantism in large dinosaur taxa. In order to infer more information on dinosaur reproduction, we established allometries between body mass and different reproductive traits (egg mass, clutch mass, annual clutch mass) for extant phylogenetic brackets (birds, crocodiles and tortoises) of extinct non-avian dinosaurs. Allometries were applied to nine non-avian dinosaur taxa (theropods, hadrosaurs, and sauropodomorphs) for which fossil estimates on relevant traits are currently available. We found that the reproductive traits of most dinosaurs conformed to similar-sized or scaled-up extant reptiles or birds. The reproductive traits of theropods, which are considered more bird-like, were indeed consistent with birds, while the traits of sauropodomorphs conformed better to reptiles. Reproductive traits of hadrosaurs corresponded to both reptiles and birds. Excluding Massospondyluscarinatus, all dinosaurs studied had an intermediary egg to body mass relationship to reptiles and birds. In contrast, dinosaur clutch masses fitted with either the masses predicted from allometries of birds (theropods) or to the masses of reptiles (all other taxa). Theropods studied had probably one clutch per year. For sauropodomorphs and hadrosaurs, more than one clutch per year was predicted. Contrary to current hypotheses, large dinosaurs did not have exceptionally high annual egg numbers (AEN). Independent of the extant model, the estimated dinosaur AEN did not exceed 850 eggs (75,000 kg sauropod) for any of the taxa studied. This estimated maximum is probably an overestimation due to unrealistic assumptions. According to most AEN estimations, the dinosaurs studied laid less than 200 eggs per year. Only some AEN estimates obtained for medium to large sized sauropods were higher (200-400 eggs). Our results provide new (testable) hypotheses, especially for reproductive traits that are insufficiently documented or lacking from the fossil record. This contributes to the understanding of their evolution.
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Affiliation(s)
- Jan Werner
- Department of Ecology, Zoological Institute, University of Mainz, Mainz, Germany.
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Griebeler EM, Klein N, Sander PM. Aging, Maturation and Growth of Sauropodomorph Dinosaurs as Deduced from Growth Curves Using Long Bone Histological Data: An Assessment of Methodological Constraints and Solutions. PLoS One 2013; 8:e67012. [PMID: 23840575 PMCID: PMC3686781 DOI: 10.1371/journal.pone.0067012] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2012] [Accepted: 05/15/2013] [Indexed: 11/18/2022] Open
Abstract
Information on aging, maturation, and growth is important for understanding life histories of organisms. In extinct dinosaurs, such information can be derived from the histological growth record preserved in the mid-shaft cortex of long bones. Here, we construct growth models to estimate ages at death, ages at sexual maturity, ages at which individuals were fully-grown, and maximum growth rates from the growth record preserved in long bones of six sauropod dinosaur individuals (one indeterminate mamenchisaurid, two Apatosaurus sp., two indeterminate diplodocids, and one Camarasaurus sp.) and one basal sauropodomorph dinosaur individual (Plateosaurus engelhardti). Using these estimates, we establish allometries between body mass and each of these traits and compare these to extant taxa. Growth models considered for each dinosaur individual were the von Bertalanffy model, the Gompertz model, and the logistic model (LGM), all of which have inherently fixed inflection points, and the Chapman-Richards model in which the point is not fixed. We use the arithmetic mean of the age at the inflection point and of the age at which 90% of asymptotic mass is reached to assess respectively the age at sexual maturity or the age at onset of reproduction, because unambiguous indicators of maturity in Sauropodomorpha are lacking. According to an AIC-based model selection process, the LGM was the best model for our sauropodomorph sample. Allometries established are consistent with literature data on other Sauropodomorpha. All Sauropodomorpha reached full size within a time span similar to scaled-up modern mammalian megaherbivores and had similar maximum growth rates to scaled-up modern megaherbivores and ratites, but growth rates of Sauropodomorpha were lower than of an average mammal. Sauropodomorph ages at death probably were lower than that of average scaled-up ratites and megaherbivores. Sauropodomorpha were older at maturation than scaled-up ratites and average mammals, but younger than scaled-up megaherbivores.
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Affiliation(s)
- Eva Maria Griebeler
- Department of Ecology, Zoological Institute, University of Mainz, Mainz, Germany
- * E-mail:
| | - Nicole Klein
- Steinmann Institute, Division of Paleontology, University of Bonn, Bonn, Germany
| | - P. Martin Sander
- Steinmann Institute, Division of Paleontology, University of Bonn, Bonn, Germany
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Birchard GF, Ruta M, Deeming DC. Evolution of parental incubation behaviour in dinosaurs cannot be inferred from clutch mass in birds. Biol Lett 2013; 9:20130036. [PMID: 23676654 DOI: 10.1098/rsbl.2013.0036] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
A recent study proposed that incubation behaviour (i.e. type of parental care) in theropod dinosaurs can be inferred from an allometric analysis of clutch volume in extant birds. However, the study in question failed to account for factors known to affect egg and clutch size in living bird species. A new scaling analysis of avian clutch mass demonstrates that type of parental care cannot be distinguished by conventional allometry because of the confounding effects of phylogeny and hatchling maturity. Precociality of young but not paternal care in the theropod ancestors of birds is consistent with the available data.
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Affiliation(s)
- Geoffrey F Birchard
- Department of Environmental Science and Policy, George Mason University, Fairfax, VA 22030, USA.
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Codron D, Carbone C, Müller DWH, Clauss M. Ontogenetic niche shifts in dinosaurs influenced size, diversity and extinction in terrestrial vertebrates. Biol Lett 2012; 8:620-3. [PMID: 22513279 DOI: 10.1098/rsbl.2012.0240] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Given the physiological limits to egg size, large-bodied non-avian dinosaurs experienced some of the most extreme shifts in size during postnatal ontogeny found in terrestrial vertebrate systems. In contrast, mammals--the other dominant vertebrate group since the Mesozoic--have less complex ontogenies. Here, we develop a model that quantifies the impact of size-specific interspecies competition on abundances of differently sized dinosaurs and mammals, taking into account the extended niche breadth realized during ontogeny among large oviparous species. Our model predicts low diversity at intermediate size classes (between approx. 1 and 1000 kg), consistent with observed diversity distributions of dinosaurs, and of Mesozoic land vertebrates in general. It also provides a mechanism--based on an understanding of different ecological and evolutionary constraints across vertebrate groups--that explains how mammals and birds, but not dinosaurs, were able to persist beyond the Cretaceous-Tertiary (K-T) boundary, and how post-K-T mammals were able to diversify into larger size categories.
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Affiliation(s)
- Daryl Codron
- Clinic for Zoo Animals, Exotic Pets and Wildlife, Vetsuisse Faculty, University of Zurich, Winterthurerstrasse 260, 8057 Zürich, Switzerland.
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