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Adams W, Graham JN, Han X, Riecke H. Top-down inputs drive neuronal network rewiring and context-enhanced sensory processing in olfaction. PLoS Comput Biol 2019; 15:e1006611. [PMID: 30668563 PMCID: PMC6358160 DOI: 10.1371/journal.pcbi.1006611] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2018] [Revised: 02/01/2019] [Accepted: 10/29/2018] [Indexed: 11/18/2022] Open
Abstract
Much of the computational power of the mammalian brain arises from its extensive top-down projections. To enable neuron-specific information processing these projections have to be precisely targeted. How such a specific connectivity emerges and what functions it supports is still poorly understood. We addressed these questions in silico in the context of the profound structural plasticity of the olfactory system. At the core of this plasticity are the granule cells of the olfactory bulb, which integrate bottom-up sensory inputs and top-down inputs delivered by vast top-down projections from cortical and other brain areas. We developed a biophysically supported computational model for the rewiring of the top-down projections and the intra-bulbar network via adult neurogenesis. The model captures various previous physiological and behavioral observations and makes specific predictions for the cortico-bulbar network connectivity that is learned by odor exposure and environmental contexts. Specifically, it predicts that-after learning-the granule-cell receptive fields with respect to sensory and with respect to cortical inputs are highly correlated. This enables cortical cells that respond to a learned odor to enact disynaptic inhibitory control specifically of bulbar principal cells that respond to that odor. For this the reciprocal nature of the granule cell synapses with the principal cells is essential. Functionally, the model predicts context-enhanced stimulus discrimination in cluttered environments ('olfactory cocktail parties') and the ability of the system to adapt to its tasks by rapidly switching between different odor-processing modes. These predictions are experimentally testable. At the same time they provide guidance for future experiments aimed at unraveling the cortico-bulbar connectivity.
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Affiliation(s)
- Wayne Adams
- Engineering Sciences and Applied Mathematics, Northwestern University, Evanston, IL, USA
| | - James N. Graham
- Engineering Sciences and Applied Mathematics, Northwestern University, Evanston, IL, USA
| | - Xuchen Han
- Mathematics, Northwestern University, Evanston, IL, USA
| | - Hermann Riecke
- Engineering Sciences and Applied Mathematics, Northwestern University, Evanston, IL, USA
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Lukas M, Holthoff K, Egger V. Long-Term Plasticity at the Mitral and Tufted Cell to Granule Cell Synapse of the Olfactory Bulb Investigated with a Custom Multielectrode in Acute Brain Slice Preparations. Methods Mol Biol 2018; 1820:157-167. [PMID: 29884945 DOI: 10.1007/978-1-4939-8609-5_13] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Single extracellular stimulation electrodes are a widespread means to locally activate synaptic inputs in acute brain slices. Here we describe the fabrication and application of a multielectrode stimulator that was developed for conditions under which independent stimulation of several nearby sites is desirable. For the construction of the multielectrode we have developed a method by which electrode wires can be spaced at minimal distances of 100 μm. This configuration increases the efficiency of stimulation paradigms, such as the comparison of proximal induced and control inputs for studies of synaptic plasticity.In our case the multielectrode was used for acute olfactory bulb slices to independently excite individual nearby glomeruli; the technique allowed us to demonstrate homosynaptic bidirectional long-term plasticity at the mitral/tufted cell to granule cell synapse. We also describe the determinants for successful recordings of long-term plasticity at this synapse, with mechanical and electrophysiological recording stability being tantamount. Finally, we briefly discuss data analysis procedures.
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Affiliation(s)
- Michael Lukas
- Institute of Zoology and Regensburg Center of Neuroscience, Regensburg University, Regensburg, Germany
| | - Knut Holthoff
- Hans-Berger Department of Neurology, University Hospital Jena, Jena, Germany
| | - Veronica Egger
- Institute of Zoology and Regensburg Center of Neuroscience, Regensburg University, Regensburg, Germany.
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Sniff-Like Patterned Input Results in Long-Term Plasticity at the Rat Olfactory Bulb Mitral and Tufted Cell to Granule Cell Synapse. Neural Plast 2016; 2016:9124986. [PMID: 27747107 PMCID: PMC5056313 DOI: 10.1155/2016/9124986] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2016] [Revised: 06/13/2016] [Accepted: 06/28/2016] [Indexed: 11/17/2022] Open
Abstract
During odor sensing the activity of principal neurons of the mammalian olfactory bulb, the mitral and tufted cells (MTCs), occurs in repetitive bursts that are synchronized to respiration, reminiscent of hippocampal theta-gamma coupling. Axonless granule cells (GCs) mediate self- and lateral inhibitory interactions between the excitatory MTCs via reciprocal dendrodendritic synapses. We have explored long-term plasticity at this synapse by using a theta burst stimulation (TBS) protocol and variations thereof. GCs were excited via glomerular stimulation in acute brain slices. We find that TBS induces exclusively long-term depression in the majority of experiments, whereas single bursts ("single-sniff paradigm") can elicit both long-term potentiation and depression. Statistical analysis predicts that the mechanism underlying this bidirectional plasticity involves the proportional addition or removal of presynaptic release sites. Gamma stimulation with the same number of APs as in TBS was less efficient in inducing plasticity. Both TBS- and "single-sniff paradigm"-induced plasticity depend on NMDA receptor activation. Since the onset of plasticity is very rapid and requires little extra activity, we propose that these forms of plasticity might play a role already during an ongoing search for odor sources. Our results imply that components of both short-term and long-term olfactory memory may be encoded at this synapse.
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Cavarretta F, Marasco A, Hines ML, Shepherd GM, Migliore M. Glomerular and Mitral-Granule Cell Microcircuits Coordinate Temporal and Spatial Information Processing in the Olfactory Bulb. Front Comput Neurosci 2016; 10:67. [PMID: 27471461 PMCID: PMC4943958 DOI: 10.3389/fncom.2016.00067] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2016] [Accepted: 06/17/2016] [Indexed: 11/20/2022] Open
Abstract
The olfactory bulb processes inputs from olfactory receptor neurons (ORNs) through two levels: the glomerular layer at the site of input, and the granule cell level at the site of output to the olfactory cortex. The sequence of action of these two levels has not yet been examined. We analyze this issue using a novel computational framework that is scaled up, in three-dimensions (3D), with realistic representations of the interactions between layers, activated by simulated natural odors, and constrained by experimental and theoretical analyses. We suggest that the postulated functions of glomerular circuits have as their primary role transforming a complex and disorganized input into a contrast-enhanced and normalized representation, but cannot provide for synchronization of the distributed glomerular outputs. By contrast, at the granule cell layer, the dendrodendritic interactions mediate temporal decorrelation, which we show is dependent on the preceding contrast enhancement by the glomerular layer. The results provide the first insights into the successive operations in the olfactory bulb, and demonstrate the significance of the modular organization around glomeruli. This layered organization is especially important for natural odor inputs, because they activate many overlapping glomeruli.
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Affiliation(s)
- Francesco Cavarretta
- Department of Neuroscience, School of Medicine, Yale UniversityNew Haven, CT, USA; Department of Mathematics "Federigo Enriques", University of MilanMilan, Italy
| | - Addolorata Marasco
- Department of Mathematics and Application "R. Cacciopoli", University of Naples Federico II Naples, Italy
| | - Michael L Hines
- Department of Neuroscience, School of Medicine, Yale University New Haven, CT, USA
| | - Gordon M Shepherd
- Department of Neuroscience, School of Medicine, Yale University New Haven, CT, USA
| | - Michele Migliore
- Department of Neuroscience, School of Medicine, Yale UniversityNew Haven, CT, USA; Institute of Biophysics, National Research CouncilPalermo, Italy
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Zhou S, Migliore M, Yu Y. Odor Experience Facilitates Sparse Representations of New Odors in a Large-Scale Olfactory Bulb Model. Front Neuroanat 2016; 10:10. [PMID: 26903819 PMCID: PMC4749983 DOI: 10.3389/fnana.2016.00010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2015] [Accepted: 01/27/2016] [Indexed: 01/11/2023] Open
Abstract
Prior odor experience has a profound effect on the coding of new odor inputs by animals. The olfactory bulb, the first relay of the olfactory pathway, can substantially shape the representations of odor inputs. How prior odor experience affects the representation of new odor inputs in olfactory bulb and its underlying network mechanism are still unclear. Here we carried out a series of simulations based on a large-scale realistic mitral-granule network model and found that prior odor experience not only accelerated formation of the network, but it also significantly strengthened sparse responses in the mitral cell network while decreasing sparse responses in the granule cell network. This modulation of sparse representations may be due to the increase of inhibitory synaptic weights. Correlations among mitral cells within the network and correlations between mitral network responses to different odors decreased gradually when the number of prior training odors was increased, resulting in a greater decorrelation of the bulb representations of input odors. Based on these findings, we conclude that the degree of prior odor experience facilitates degrees of sparse representations of new odors by the mitral cell network through experience-enhanced inhibition mechanism.
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Affiliation(s)
- Shanglin Zhou
- School of Life Science and The Collaborative Innovation Center for Brain Science, The Center for Computational Systems Biology, Fudan University Shanghai, China
| | - Michele Migliore
- Division of Palermo, Institute of Biophysics, National Research CouncilPalermo, Italy; Department of Neurobiology, Yale University School of MedicineNew Haven, CT, USA
| | - Yuguo Yu
- School of Life Science and The Collaborative Innovation Center for Brain Science, The Center for Computational Systems Biology, Fudan University Shanghai, China
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Cauthron JL, Stripling JS. Long-term plasticity in the regulation of olfactory bulb activity by centrifugal fibers from piriform cortex. J Neurosci 2014; 34:9677-87. [PMID: 25031407 PMCID: PMC4099545 DOI: 10.1523/jneurosci.1314-14.2014] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2014] [Revised: 06/05/2014] [Accepted: 06/10/2014] [Indexed: 11/21/2022] Open
Abstract
Olfactory bulb granule cells are activated synaptically via two main pathways. Mitral/tufted (M/T) cells form dendrodendritic synapses on granule cells that can be activated by antidromic stimulation of the lateral olfactory tract (LOT). Centrifugal fibers originating from the association fiber (AF) system in piriform cortex (PC) make axodendritic synapses on granule cells within the granule cell layer (GCL) that can be activated by orthodromic stimulation of AF axons in the PC. We explored functional plasticity in the AF pathway by recording extracellularly from individual M/T cells and presumed granule cells in male Long-Evans rats under urethane anesthesia while testing their response to LOT and AF stimulation. Presumed granule cells driven synaptically by LOT stimulation (type L cells) were concentrated in the superficial half of the GCL and were activated at short latencies, whereas those driven synaptically by AF stimulation (type A cells) were concentrated in the deep half of the GCL and were activated at longer latencies. Type A cells were readily detected only in animals in which the AF input to the GCL had been previously potentiated by repeated high-frequency stimulation. An additional bout of high-frequency stimulation administered under urethane caused an immediate increase in the number of action potentials evoked in type A cells by AF test stimulation and a concomitant increase in inhibition of M/T cells. These results underscore the importance of the role played in olfactory processing by PC regulation of OB activity and document the long-lasting potentiation of that regulation by repeated high-frequency AF activation.
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Affiliation(s)
- Joy L Cauthron
- Department of Psychological Science, University of Arkansas, Fayetteville, Arkansas 72701
| | - Jeffrey S Stripling
- Department of Psychological Science, University of Arkansas, Fayetteville, Arkansas 72701
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Yu Y, McTavish TS, Hines ML, Shepherd GM, Valenti C, Migliore M. Sparse distributed representation of odors in a large-scale olfactory bulb circuit. PLoS Comput Biol 2013; 9:e1003014. [PMID: 23555237 PMCID: PMC3610624 DOI: 10.1371/journal.pcbi.1003014] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2012] [Accepted: 02/14/2013] [Indexed: 11/20/2022] Open
Abstract
In the olfactory bulb, lateral inhibition mediated by granule cells has been suggested to modulate the timing of mitral cell firing, thereby shaping the representation of input odorants. Current experimental techniques, however, do not enable a clear study of how the mitral-granule cell network sculpts odor inputs to represent odor information spatially and temporally. To address this critical step in the neural basis of odor recognition, we built a biophysical network model of mitral and granule cells, corresponding to 1/100th of the real system in the rat, and used direct experimental imaging data of glomeruli activated by various odors. The model allows the systematic investigation and generation of testable hypotheses of the functional mechanisms underlying odor representation in the olfactory bulb circuit. Specifically, we demonstrate that lateral inhibition emerges within the olfactory bulb network through recurrent dendrodendritic synapses when constrained by a range of balanced excitatory and inhibitory conductances. We find that the spatio-temporal dynamics of lateral inhibition plays a critical role in building the glomerular-related cell clusters observed in experiments, through the modulation of synaptic weights during odor training. Lateral inhibition also mediates the development of sparse and synchronized spiking patterns of mitral cells related to odor inputs within the network, with the frequency of these synchronized spiking patterns also modulated by the sniff cycle. In the paper we address the role of lateral inhibition in a neuronal network. It is an essential and widespread mechanism of neural processing that has been demonstrated in many brain systems. A key finding that would reveal how and to what extent it can modulate input signals and give rise to some form of perception would involve network-wide recording of individual cells during in vivo behavioral experiments. While this problem has been intensely investigated, it is beyond current methods to record from a reasonable set of cells experimentally to decipher the emergent properties and behavior of the network, leaving the underlying computational and functional roles of lateral inhibition still poorly understood. We addressed this problem using a large-scale model of the olfactory bulb. The model demonstrates how lateral inhibition modulates the evolving dynamics of the olfactory bulb network, generating mitral and granule cell responses that account for critical experimental findings. It also suggests how odor identity can be represented by a combination of temporal and spatial patterns of mitral cell activity, with both feedforward excitation and lateral inhibition via dendrodendritic synapses as the underlying mechanisms facilitating network self-organization and the emergence of synchronized oscillations.
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Affiliation(s)
- Yuguo Yu
- Centre for Computational Systems Biology, School of Life Sciences, Fudan University, Shanghai, People's Republic of China
- Department of Neurobiology, Yale University School of Medicine, New Haven, Connecticut, United States of America
| | - Thomas S. McTavish
- Department of Neurobiology, Yale University School of Medicine, New Haven, Connecticut, United States of America
| | - Michael L. Hines
- Department of Neurobiology, Yale University School of Medicine, New Haven, Connecticut, United States of America
| | - Gordon M. Shepherd
- Department of Neurobiology, Yale University School of Medicine, New Haven, Connecticut, United States of America
| | - Cesare Valenti
- Department of Mathematics and Informatics, University of Palermo, Palermo, Italy
| | - Michele Migliore
- Department of Neurobiology, Yale University School of Medicine, New Haven, Connecticut, United States of America
- Institute of Biophysics, National Research Council, Palermo, Italy
- * E-mail:
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