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For: Van Lehn RC, Alexander-Katz A. Energy landscape for the insertion of amphiphilic nanoparticles into lipid membranes: A computational study. PLoS One 2019;14:e0209492. [PMID: 30625163 PMCID: PMC6326551 DOI: 10.1371/journal.pone.0209492] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2018] [Accepted: 11/30/2018] [Indexed: 11/19/2022]  Open
Number Cited by Other Article(s)
1
Huang-Zhu CA, Sheavly JK, Chew AK, Patel SJ, Van Lehn RC. Ligand Lipophilicity Determines Molecular Mechanisms of Nanoparticle Adsorption to Lipid Bilayers. ACS NANO 2024;18:6424-6437. [PMID: 38354368 DOI: 10.1021/acsnano.3c11854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/16/2024]
2
Mashali F, Basham CM, Xu X, Servidio C, Silva PHJ, Stellacci F, Sarles SA. Simultaneous Electrophysiology and Imaging Reveal Changes in Lipid Membrane Thickness and Tension upon Uptake of Amphiphilic Gold Nanoparticles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2023;39:15031-15045. [PMID: 37812767 DOI: 10.1021/acs.langmuir.3c01973] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/11/2023]
3
Wijesinghe S, Junghans C, Perahia D, Grest GS. Polydots, soft nanoparticles, at membrane interfaces. RSC Adv 2023;13:19227-19234. [PMID: 37377875 PMCID: PMC10291257 DOI: 10.1039/d3ra02085a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Accepted: 06/18/2023] [Indexed: 06/29/2023]  Open
4
Hazra R, Roy D. Free energy landscape of wrapping of lipid nanocluster by polysaccharides. Biophys Chem 2023;294:106956. [PMID: 36630748 DOI: 10.1016/j.bpc.2023.106956] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2022] [Revised: 10/18/2022] [Accepted: 01/04/2023] [Indexed: 01/08/2023]
5
Jin T, Coley CW, Alexander-Katz A. Adsorption of Biomimetic Amphiphilic Heteropolymers onto Graphene and Its Derivatives. Macromolecules 2023. [DOI: 10.1021/acs.macromol.2c02413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2023]
6
Lavagna E, Güven ZP, Bochicchio D, Olgiati F, Stellacci F, Rossi G. Amphiphilic nanoparticles generate curvature in lipid membranes and shape liposome-liposome interfaces. NANOSCALE 2021;13:16879-16884. [PMID: 34617538 PMCID: PMC8530203 DOI: 10.1039/d1nr05067b] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Accepted: 09/26/2021] [Indexed: 05/29/2023]
7
Novel cytotoxic amphiphilic nitro-compounds derived from a synthetic route for paraconic acids. Colloids Surf A Physicochem Eng Asp 2021. [DOI: 10.1016/j.colsurfa.2021.126984] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
8
Basham CM, Premadasa UI, Ma YZ, Stellacci F, Doughty B, Sarles SA. Nanoparticle-Induced Disorder at Complex Liquid-Liquid Interfaces: Effects of Curvature and Compositional Synergy on Functional Surfaces. ACS NANO 2021;15:14285-14294. [PMID: 34516085 DOI: 10.1021/acsnano.1c02663] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
9
Canepa E, Bochicchio D, Gasbarri M, Odino D, Canale C, Ferrando R, Canepa F, Stellacci F, Rossi G, Dante S, Relini A. Cholesterol Hinders the Passive Uptake of Amphiphilic Nanoparticles into Fluid Lipid Membranes. J Phys Chem Lett 2021;12:8583-8590. [PMID: 34468146 PMCID: PMC8436204 DOI: 10.1021/acs.jpclett.1c02077] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
10
Lin X, Lin X. Surface ligand rigidity modulates lipid raft affinity of ultra-small hydrophobic nanoparticles: insights from molecular dynamics simulations. NANOSCALE 2021;13:9825-9833. [PMID: 34032262 DOI: 10.1039/d1nr01563j] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
11
Mazumdar S, Chitkara D, Mittal A. Exploration and insights into the cellular internalization and intracellular fate of amphiphilic polymeric nanocarriers. Acta Pharm Sin B 2021;11:903-924. [PMID: 33996406 PMCID: PMC8105776 DOI: 10.1016/j.apsb.2021.02.019] [Citation(s) in RCA: 62] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Revised: 12/20/2020] [Accepted: 01/18/2021] [Indexed: 01/01/2023]  Open
12
Molecular Dynamics Simulations in Drug Discovery and Pharmaceutical Development. Processes (Basel) 2020. [DOI: 10.3390/pr9010071] [Citation(s) in RCA: 136] [Impact Index Per Article: 34.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
13
Bunker A, Róg T. Mechanistic Understanding From Molecular Dynamics Simulation in Pharmaceutical Research 1: Drug Delivery. Front Mol Biosci 2020;7:604770. [PMID: 33330633 PMCID: PMC7732618 DOI: 10.3389/fmolb.2020.604770] [Citation(s) in RCA: 41] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Accepted: 11/02/2020] [Indexed: 12/12/2022]  Open
14
Adhesion and Aggregation of Spherical Nanoparticles on Lipid Membranes. Chem Phys Lipids 2020;233:104989. [PMID: 33120231 DOI: 10.1016/j.chemphyslip.2020.104989] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2020] [Revised: 10/02/2020] [Accepted: 10/02/2020] [Indexed: 02/03/2023]
15
Wiemann JT, Shen Z, Ye H, Li Y, Yu Y. Membrane poration, wrinkling, and compression: deformations of lipid vesicles induced by amphiphilic Janus nanoparticles. NANOSCALE 2020;12:20326-20336. [PMID: 33006360 DOI: 10.1039/d0nr05355d] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
16
Canepa E, Salassi S, de Marco AL, Lambruschini C, Odino D, Bochicchio D, Canepa F, Canale C, Dante S, Brescia R, Stellacci F, Rossi G, Relini A. Amphiphilic gold nanoparticles perturb phase separation in multidomain lipid membranes. NANOSCALE 2020;12:19746-19759. [PMID: 32966489 DOI: 10.1039/d0nr05366j] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
17
Nisoh N, Jarerattanachat V, Karttunen M, Wong-Ekkabut J. Formation of aggregates, icosahedral structures and percolation clusters of fullerenes in lipids bilayers: The key role of lipid saturation. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2020;1862:183328. [PMID: 32343957 DOI: 10.1016/j.bbamem.2020.183328] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2020] [Revised: 04/17/2020] [Accepted: 04/22/2020] [Indexed: 02/07/2023]
18
Okoampah E, Mao Y, Yang S, Sun S, Zhou C. Gold nanoparticles-biomembrane interactions: From fundamental to simulation. Colloids Surf B Biointerfaces 2020;196:111312. [PMID: 32841786 DOI: 10.1016/j.colsurfb.2020.111312] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2020] [Revised: 07/20/2020] [Accepted: 08/06/2020] [Indexed: 12/21/2022]
19
Calcium-triggered fusion of lipid membranes is enabled by amphiphilic nanoparticles. Proc Natl Acad Sci U S A 2020;117:18470-18476. [PMID: 32690682 DOI: 10.1073/pnas.1902597117] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]  Open
20
Ou L, Corradi V, Tieleman DP, Liang Q. Atomistic Simulations on Interactions between Amphiphilic Janus Nanoparticles and Lipid Bilayers: Effects of Lipid Ordering and Leaflet Asymmetry. J Phys Chem B 2020;124:4466-4475. [DOI: 10.1021/acs.jpcb.9b11989] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
21
Nain A, Tseng YT, Wei SC, Periasamy AP, Huang CC, Tseng FG, Chang HT. Capping 1,3-propanedithiol to boost the antibacterial activity of protein-templated copper nanoclusters. JOURNAL OF HAZARDOUS MATERIALS 2020;389:121821. [PMID: 31879116 DOI: 10.1016/j.jhazmat.2019.121821] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2019] [Revised: 11/27/2019] [Accepted: 12/03/2019] [Indexed: 06/10/2023]
22
Angelescu DG. Structural behavior of amphiphilic polyion complexes interacting with saturated lipid membranes investigated by coarse-grained molecular dynamic simulations. RSC Adv 2020;10:39204-39216. [PMID: 35518426 PMCID: PMC9057367 DOI: 10.1039/d0ra06894b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2020] [Accepted: 10/16/2020] [Indexed: 11/21/2022]  Open
23
Grupi A, Ashur I, Degani-Katzav N, Yudovich S, Shapira Z, Marzouq A, Morgenstein L, Mandel Y, Weiss S. Interfacing the Cell with "Biomimetic Membrane Proteins". SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2019;15:e1903006. [PMID: 31765076 DOI: 10.1002/smll.201903006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2019] [Revised: 09/30/2019] [Indexed: 06/10/2023]
24
Lolicato F, Joly L, Martinez-Seara H, Fragneto G, Scoppola E, Baldelli Bombelli F, Vattulainen I, Akola J, Maccarini M. The Role of Temperature and Lipid Charge on Intake/Uptake of Cationic Gold Nanoparticles into Lipid Bilayers. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2019;15:e1805046. [PMID: 31012268 DOI: 10.1002/smll.201805046] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2018] [Revised: 03/13/2019] [Indexed: 05/23/2023]
25
Franco-Ulloa S, Riccardi L, Rimembrana F, Pini M, De Vivo M. NanoModeler: A Webserver for Molecular Simulations and Engineering of Nanoparticles. J Chem Theory Comput 2019;15:2022-2032. [PMID: 30758952 DOI: 10.1021/acs.jctc.8b01304] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
26
Salassi S, Canepa E, Ferrando R, Rossi G. Anionic nanoparticle-lipid membrane interactions: the protonation of anionic ligands at the membrane surface reduces membrane disruption. RSC Adv 2019;9:13992-13997. [PMID: 35519336 PMCID: PMC9064125 DOI: 10.1039/c9ra02462j] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Accepted: 04/25/2019] [Indexed: 11/21/2022]  Open
27
Nakamura H, Sezawa K, Hata M, Ohsaki S, Watano S. Direct translocation of nanoparticles across a model cell membrane by nanoparticle-induced local enhancement of membrane potential. Phys Chem Chem Phys 2019;21:18830-18838. [DOI: 10.1039/c9cp02935d] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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