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For: Vieira MLC, Santini L, Diniz AL, Munhoz CDF. Microsatellite markers: what they mean and why they are so useful. Genet Mol Biol 2016;39:312-28. [PMID: 27561112 PMCID: PMC5004837 DOI: 10.1590/1678-4685-gmb-2016-0027] [Citation(s) in RCA: 268] [Impact Index Per Article: 33.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2016] [Accepted: 05/13/2016] [Indexed: 12/11/2022]  Open
Number Cited by Other Article(s)
1
Dantas CWD, da Costa Neto SR, Alves SIA, da Costa Pinheiro K, De Los Santos EFF, Ramos RTJ. SATIN: a micro and mini satellite mining tool of total genome and coding regions with analysis of perfect repeats polymorphism in coding regions. BMC Bioinformatics 2024;25:217. [PMID: 38890569 PMCID: PMC11186120 DOI: 10.1186/s12859-024-05842-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2024] [Accepted: 06/12/2024] [Indexed: 06/20/2024]  Open
2
Dallagnol LC, Cônsoli FL. Evolutionary and phylogenetic insights from the mitochondrial genomic analysis of Diceraeus melacanthus and D. furcatus (Hemiptera: Pentatomidae). Sci Rep 2024;14:12861. [PMID: 38834792 DOI: 10.1038/s41598-024-63584-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Accepted: 05/30/2024] [Indexed: 06/06/2024]  Open
3
Rios-Willars E, Chirinos-Arias MC. Mfind: a tool for DNA barcode analysis in angiosperms and its relationship with microsatellites using a sliding window algorithm. PLANTA 2024;259:134. [PMID: 38671234 DOI: 10.1007/s00425-024-04420-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2023] [Accepted: 04/17/2024] [Indexed: 04/28/2024]
4
Marin MV, Ratti MF, Peres NA, Goss EM. New Genotypes of Phytophthora nicotianae Found on Strawberry in Florida. PHYTOPATHOLOGY 2024;114:743-751. [PMID: 37942874 DOI: 10.1094/phyto-05-23-0175-r] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2023]
5
Koubínová D, GoFlag Consortium, Grant JR. Microsatellite Content in 397 Nuclear Exons and Their Flanking Regions in the Fern Family Ophioglossaceae. PLANTS (BASEL, SWITZERLAND) 2024;13:713. [PMID: 38475562 DOI: 10.3390/plants13050713] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 11/02/2023] [Accepted: 11/06/2023] [Indexed: 03/14/2024]
6
Nayak AK, Golive P, Sasmal A, Devanna BN, Anilkumar C, Mukherjee AK, Dash SS, Das Mohapatra S, Subudhi H. Exploring genetic divergence and marker-trait associations for leaffolder Cnaphalocrocis medinalis (Guenee) resistance in rice landraces. 3 Biotech 2024;14:90. [PMID: 38414829 PMCID: PMC10894780 DOI: 10.1007/s13205-024-03930-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 01/11/2024] [Indexed: 02/29/2024]  Open
7
Bergez-Hernández F, Luque-Ortega F, García-Magallanes N, Alvarez-Arrazola M, Arámbula-Meraz E. Deletion in a regulatory region is associated with underexpression of miR-148b‑3p in patients with prostate cancer. Biomed Rep 2024;20:52. [PMID: 38357236 PMCID: PMC10865175 DOI: 10.3892/br.2024.1740] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Accepted: 01/02/2024] [Indexed: 02/16/2024]  Open
8
Cadorna CAE, Pahayo DG, Rey JD. The first mitochondrial genome of Calophyllum soulattri Burm.f. Sci Rep 2024;14:5112. [PMID: 38429360 PMCID: PMC10907642 DOI: 10.1038/s41598-024-55016-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Accepted: 02/19/2024] [Indexed: 03/03/2024]  Open
9
Mao ML, Luo T, Li W, Xiao N, Deng HQ, Zhou J. Isolation and characterisation of 17 microsatellite DNA loci from RAD reduced-representation genomes for Asian warty newts, genus Paramesotriton (Caudata: Salamandridae). Biodivers Data J 2024;12:e113979. [PMID: 38348181 PMCID: PMC10859859 DOI: 10.3897/bdj.12.e113979] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 12/12/2023] [Indexed: 02/15/2024]  Open
10
Feldmeyer B, Bornberg-Bauer E, Dohmen E, Fouks B, Heckenhauer J, Huylmans AK, Jones ARC, Stolle E, Harrison MC. Comparative Evolutionary Genomics in Insects. Methods Mol Biol 2024;2802:473-514. [PMID: 38819569 DOI: 10.1007/978-1-0716-3838-5_16] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/01/2024]
11
Limbalkar OM, Vasisth P, Singh G, Jain P, Sharma M, Singh R, Dhanasekaran G, Kumar M, Meena ML, Iquebal MA, Jaiswal S, Rao M, Watts A, Bhattacharya R, Singh KH, Kumar D, Singh N. Dissection of QTLs conferring drought tolerance in B. carinata derived B. juncea introgression lines. BMC PLANT BIOLOGY 2023;23:664. [PMID: 38129793 PMCID: PMC10740311 DOI: 10.1186/s12870-023-04614-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2023] [Accepted: 11/16/2023] [Indexed: 12/23/2023]
12
Mokhtar MM, Alsamman AM, El Allali A. MegaSSR: a web server for large scale microsatellite identification, classification, and marker development. FRONTIERS IN PLANT SCIENCE 2023;14:1219055. [PMID: 38162302 PMCID: PMC10757629 DOI: 10.3389/fpls.2023.1219055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Accepted: 08/18/2023] [Indexed: 01/03/2024]
13
Luna R, Acuña W, Gutiérrez G, Castro Muñoz MDR, Veli E. Genetic diversity in creole pigs in south central Peru. Trop Anim Health Prod 2023;55:426. [PMID: 38030863 DOI: 10.1007/s11250-023-03839-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Accepted: 11/21/2023] [Indexed: 12/01/2023]
14
Francisconi AF, Marroquín JAM, Cauz-Santos LA, van den Berg C, Martins KKM, Costa MF, Picanço-Rodrigues D, de Alencar LD, Zanello CA, Colombo CA, Hernández BGD, Amaral DT, Lopes MTG, Veasey EA, Zucchi MI. Complete chloroplast genomes of six neotropical palm species, structural comparison, and evolutionary dynamic patterns. Sci Rep 2023;13:20635. [PMID: 37996522 PMCID: PMC10667357 DOI: 10.1038/s41598-023-44631-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2023] [Accepted: 10/10/2023] [Indexed: 11/25/2023]  Open
15
Engloner AI, Németh K, Kós PB, Meglécz E, Bereczki J. Genetic diversity of the submerged macrophyte Ceratophyllum demersum depends on habitat hydrology and habitat fragmentation. FRONTIERS IN PLANT SCIENCE 2023;14:1277916. [PMID: 38023870 PMCID: PMC10665863 DOI: 10.3389/fpls.2023.1277916] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Accepted: 10/23/2023] [Indexed: 12/01/2023]
16
Bei L, He C, Liu J, Han C, Zhou H, Zhaorigetu, Siqintuya, Li J, Su X, Wang Y, Chen Q, Nashun, Daolema, Meng H. Genome-wide identification and characterization of microsatellite markers in Bactrian Camel. Genomics 2023;115:110726. [PMID: 37832857 DOI: 10.1016/j.ygeno.2023.110726] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2023] [Revised: 10/05/2023] [Accepted: 10/08/2023] [Indexed: 10/15/2023]
17
Ahmed SF, Ahmed JU, Hasan M, Mohi-Ud-Din M. Assessment of genetic variation among wheat genotypes for drought tolerance utilizing microsatellite markers and morpho-physiological characteristics. Heliyon 2023;9:e21629. [PMID: 38027610 PMCID: PMC10658252 DOI: 10.1016/j.heliyon.2023.e21629] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2023] [Revised: 09/18/2023] [Accepted: 10/25/2023] [Indexed: 12/01/2023]  Open
18
Sharma H, Shayaba, Kumar R, Kumar J, Bhadana D, Batra R, Singh R, Kumar S, Roy JK, Balyan HS, Gupta PK. Comparative analysis of VMT genes/proteins in selected plant species with emphasis on bread wheat (Triticum aestivum L.). Genes Genomics 2023;45:1445-1461. [PMID: 37493927 DOI: 10.1007/s13258-023-01427-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2023] [Accepted: 07/09/2023] [Indexed: 07/27/2023]
19
Safaa H, Khaled R, Isaac S, Mostafa R, Ragab M, Elsayed DAA, Helal M. Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks. J Genet Eng Biotechnol 2023;21:105. [PMID: 37856056 PMCID: PMC10587045 DOI: 10.1186/s43141-023-00556-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2023] [Accepted: 10/08/2023] [Indexed: 10/20/2023]
20
Panzera F, Cuadrado Á, Mora P, Palomeque T, Lorite P, Pita S. Differential Spreading of Microsatellites in Holocentric Chromosomes of Chagas Disease Vectors: Genomic and Evolutionary Implications. INSECTS 2023;14:772. [PMID: 37754740 PMCID: PMC10531928 DOI: 10.3390/insects14090772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 09/13/2023] [Accepted: 09/17/2023] [Indexed: 09/28/2023]
21
Wu S, Li R, Jiang Y, Yu J, Zheng J, Li Z, Li M, Xin K, Wang Y, Xu Z, Li S, Chen X. Liquid biopsy in urothelial carcinoma: Detection techniques and clinical applications. Biomed Pharmacother 2023;165:115027. [PMID: 37354812 DOI: 10.1016/j.biopha.2023.115027] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2023] [Revised: 06/13/2023] [Accepted: 06/14/2023] [Indexed: 06/26/2023]  Open
22
Savadi S, Muralidhara BM, Venkataravanappa V, Adiga JD. Genome-wide survey and characterization of microsatellites in cashew and design of a web-based microsatellite database: CMDB. FRONTIERS IN PLANT SCIENCE 2023;14:1242025. [PMID: 37670858 PMCID: PMC10475544 DOI: 10.3389/fpls.2023.1242025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2023] [Accepted: 07/31/2023] [Indexed: 09/07/2023]
23
Li B, Muhammad N, Zhang S, Lan Y, Yang Y, Han S, Liu M, Yang M. Multiple-Genome-Based Simple Sequence Repeat Is an Efficient and Successful Method in Genotyping and Classifying Different Jujube Germplasm Resources. PLANTS (BASEL, SWITZERLAND) 2023;12:2885. [PMID: 37571038 PMCID: PMC10421302 DOI: 10.3390/plants12152885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Revised: 07/23/2023] [Accepted: 08/03/2023] [Indexed: 08/13/2023]
24
Chaudhary S, Singh RK, Kumar P. Genome-wide identification, characterization and primer designing of simple sequence repeats across Leguminosae family. 3 Biotech 2023;13:286. [PMID: 37520343 PMCID: PMC10382446 DOI: 10.1007/s13205-023-03706-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 07/16/2023] [Indexed: 08/01/2023]  Open
25
Yerzhebayeva R, Didorenko S, Amangeldiyeva A, Daniyarova A, Mazkirat S, Zinchenko A, Shavrukov Y. Marker-Assisted Selection for Early Maturing E Loci in Soybean Yielded Prospective Breeding Lines for High Latitudes of Northern Kazakhstan. Biomolecules 2023;13:1146. [PMID: 37509181 PMCID: PMC10377072 DOI: 10.3390/biom13071146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 07/16/2023] [Accepted: 07/17/2023] [Indexed: 07/30/2023]  Open
26
Sahu A, Singh R, Verma PK. Plant BBR/BPC transcription factors: unlocking multilayered regulation in development, stress and immunity. PLANTA 2023;258:31. [PMID: 37368167 DOI: 10.1007/s00425-023-04188-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Accepted: 06/17/2023] [Indexed: 06/28/2023]
27
Nasrin T, Hoque M, Ali S. Systems biology of the genomes' microsatellite signature of Orthopoxvirus including the Monkeypox virus. Comp Immunol Microbiol Infect Dis 2023;98:102002. [PMID: 37329681 DOI: 10.1016/j.cimid.2023.102002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Revised: 05/07/2023] [Accepted: 05/30/2023] [Indexed: 06/19/2023]
28
Kovincic A, Markovic K, Ristic D, Babic V, Petrovic T, Zivanovic T, Kravic N. Efficiency of Biological Typing Methods in Maize Hybrid Genetic Purity Estimation. Genes (Basel) 2023;14:1195. [PMID: 37372375 DOI: 10.3390/genes14061195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Revised: 05/22/2023] [Accepted: 05/23/2023] [Indexed: 06/29/2023]  Open
29
Xiao XO, Zhang N, Jin H, Si H. Genetic Analysis of Potato Breeding Collection Using Single-Nucleotide Polymorphism (SNP) Markers. PLANTS (BASEL, SWITZERLAND) 2023;12:plants12091895. [PMID: 37176953 PMCID: PMC10181131 DOI: 10.3390/plants12091895] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2023] [Revised: 04/21/2023] [Accepted: 04/24/2023] [Indexed: 05/15/2023]
30
Anilkumar C, Muhammed Azharudheen TP, Sah RP, Sunitha NC, Devanna BN, Marndi BC, Patra BC. Gene based markers improve precision of genome-wide association studies and accuracy of genomic predictions in rice breeding. Heredity (Edinb) 2023;130:335-345. [PMID: 36792661 PMCID: PMC10163052 DOI: 10.1038/s41437-023-00599-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Revised: 02/02/2023] [Accepted: 02/03/2023] [Indexed: 02/17/2023]  Open
31
Xu W, Wang J, Tian C, Shi W, Wang L. Genome-Wide Development of Polymorphic Microsatellite Markers and Genetic Diversity Analysis for the Halophyte Suaeda aralocaspica (Amaranthaceae). PLANTS (BASEL, SWITZERLAND) 2023;12:plants12091865. [PMID: 37176923 PMCID: PMC10181123 DOI: 10.3390/plants12091865] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 04/14/2023] [Accepted: 04/28/2023] [Indexed: 05/15/2023]
32
Gan J, Li Y, Tang D, Guo B, Li D, Cao F, Sun C, Yu L, Yan Z. The Complete Chloroplast Genomes of Gynostemma Reveal the Phylogenetic Relationships of Species within the Genus. Genes (Basel) 2023;14:genes14040929. [PMID: 37107687 PMCID: PMC10138119 DOI: 10.3390/genes14040929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Revised: 04/06/2023] [Accepted: 04/16/2023] [Indexed: 04/29/2023]  Open
33
Kaur S, Sharma PC. Microsatellite diversity in four cultivated species of Actinidiaceae and Rutaceae. Bioinformation 2023;19:230-234. [PMID: 37808387 PMCID: PMC10557435 DOI: 10.6026/97320630019230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 03/31/2023] [Accepted: 03/31/2023] [Indexed: 10/10/2023]  Open
34
Jeseničnik T, Kaurin A, Grgič Z, Radišek S, Jakše J, Štajner N. Novel Identification of the Collection of Pathogenic Fungal Species Verticillium with the Development of Species-Specific SSR Markers. Pathogens 2023;12:pathogens12040535. [PMID: 37111421 PMCID: PMC10143602 DOI: 10.3390/pathogens12040535] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Revised: 03/27/2023] [Accepted: 03/28/2023] [Indexed: 04/29/2023]  Open
35
Zhao M, Shu G, Hu Y, Cao G, Wang Y. Pattern and variation in simple sequence repeat (SSR) at different genomic regions and its implications to maize evolution and breeding. BMC Genomics 2023;24:136. [PMID: 36944913 PMCID: PMC10029318 DOI: 10.1186/s12864-023-09156-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2022] [Accepted: 01/30/2023] [Indexed: 03/23/2023]  Open
36
Losada LCDML, Monteiro RC, de Carvalho JA, Hagen F, Fisher MC, Spruijtenburg B, Meis JF, de Groot T, Gonçalves SS, Negroni R, Kano R, Bonifaz A, de Camargo ZP, Rodrigues AM. High-Throughput Microsatellite Markers Development for Genetic Characterization of Emerging Sporothrix Species. J Fungi (Basel) 2023;9:354. [PMID: 36983522 PMCID: PMC10054832 DOI: 10.3390/jof9030354] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Revised: 03/07/2023] [Accepted: 03/10/2023] [Indexed: 03/17/2023]  Open
37
Whole Genome Wide SSR Markers Identification Based on ddRADseq Data. Methods Mol Biol 2023;2638:59-66. [PMID: 36781635 DOI: 10.1007/978-1-0716-3024-2_5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/15/2023]
38
Alekseeva M, Rusanova M, Rusanov K, Atanassov I. A Set of Highly Polymorphic Microsatellite Markers for Genetic Diversity Studies in the Genus Origanum. PLANTS (BASEL, SWITZERLAND) 2023;12:plants12040824. [PMID: 36840172 PMCID: PMC9965030 DOI: 10.3390/plants12040824] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 02/06/2023] [Accepted: 02/10/2023] [Indexed: 05/14/2023]
39
Yarita S, Morgan-Richards M, Trewick SA. Genotypic detection of barriers to rat dispersal: Rattus rattus behind a peninsula predator-proof fence. Biol Invasions 2023;25:1723-1738. [PMID: 36777104 PMCID: PMC9900205 DOI: 10.1007/s10530-023-03004-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Accepted: 01/12/2023] [Indexed: 02/09/2023]
40
Sah RP, Nayak AK, Chandrappa A, Behera S, Azharudheen Tp M, Lavanya GR. cgSSR marker-based genome-wide association study identified genomic regions for panicle characters and yield in rice (Oryza sativa L.). JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2023;103:720-728. [PMID: 36054367 DOI: 10.1002/jsfa.12183] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Revised: 08/03/2022] [Accepted: 08/21/2022] [Indexed: 06/15/2023]
41
Ramesh P, Juturu VN, Yugandhar P, Pedersen S, Hemasundar A, Yolcu S, Chandra Obul Reddy P, Chandra Mohan Reddy CV, Veerabramha Chari P, Mohan R, Chandra Sekhar A. Molecular genetics and phenotypic assessment of foxtail millet (Setaria italica (L.) P. Beauv.) landraces revealed remarkable variability of morpho-physiological, yield, and yield-related traits. Front Genet 2023;14:1052575. [PMID: 36760993 PMCID: PMC9905688 DOI: 10.3389/fgene.2023.1052575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2022] [Accepted: 01/09/2023] [Indexed: 01/26/2023]  Open
42
Tao F, Fan C, Liu Y, Sivakumar S, Kowalski KP, Golenberg EM. Optimization and application of non-native Phragmites australis transcriptome assemblies. PLoS One 2023;18:e0280354. [PMID: 36689482 PMCID: PMC9870158 DOI: 10.1371/journal.pone.0280354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Accepted: 12/27/2022] [Indexed: 01/24/2023]  Open
43
Genome Survey Sequencing of the Mole Cricket Gryllotalpa orientalis. Genes (Basel) 2023;14:genes14020255. [PMID: 36833184 PMCID: PMC9957284 DOI: 10.3390/genes14020255] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Revised: 01/05/2023] [Accepted: 01/13/2023] [Indexed: 01/20/2023]  Open
44
Draga S, Palumbo F, Miracolo Barbagiovanni I, Pati F, Barcaccia G. Management of genetic erosion: The (successful) case study of the pear (Pyrus communis L.) germplasm of the Lazio region (Italy). FRONTIERS IN PLANT SCIENCE 2023;13:1099420. [PMID: 36699862 PMCID: PMC9868429 DOI: 10.3389/fpls.2022.1099420] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Accepted: 12/19/2022] [Indexed: 06/17/2023]
45
Navale VD, Sawant AM, Vamkudoth KR. Genetic diversity of toxigenic Fusarium verticillioides associated with maize grains, India. Genet Mol Biol 2023;46:e20220073. [PMID: 37036389 PMCID: PMC10084715 DOI: 10.1590/1678-4685-gmb-2022-0073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 11/22/2022] [Indexed: 04/11/2023]  Open
46
Chaudhary V, Jangra S, Mishra A, Yadav NR. MicroRNA Identification, Target Prediction, and Validation for Crop Improvement. Methods Mol Biol 2023;2630:13-24. [PMID: 36689173 DOI: 10.1007/978-1-0716-2982-6_2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
47
Chen J, Cui H, Huang H, Wei S, Liu Y, Yu H, Ma Y, Li X, Ma X. EST-SSR Markers' Development Based on RNA-Sequencing and Their Application in Population Genetic Structure and Diversity Analysis of Eleusine indica in China. Curr Issues Mol Biol 2022;45:141-150. [PMID: 36661497 PMCID: PMC9856800 DOI: 10.3390/cimb45010011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 12/08/2022] [Accepted: 12/22/2022] [Indexed: 12/28/2022]  Open
48
Singh L, Nanjundan J, Sharma D, Singh K, Parmar N, Jain R, Thakur AK. Agro-morphological traits and SSR markers reveal genetic variations in germplasm accessions of Indian mustard - An industrially important oilseed crop. Heliyon 2022;8:e12519. [PMID: 36590556 PMCID: PMC9801116 DOI: 10.1016/j.heliyon.2022.e12519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2022] [Revised: 04/27/2022] [Accepted: 12/13/2022] [Indexed: 12/24/2022]  Open
49
Wang Y, Xu J, Zhao W, Li J, Chen J. Genome-wide identification, characterization, and genetic diversity of CCR gene family in Dalbergia odorifera. FRONTIERS IN PLANT SCIENCE 2022;13:1064262. [PMID: 36600926 PMCID: PMC9806228 DOI: 10.3389/fpls.2022.1064262] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/08/2022] [Accepted: 11/28/2022] [Indexed: 06/17/2023]
50
Voon KJ, Sivasothy Y, Sundralingam U, Lalmahomed A, Goh APT. Cytotoxic Labdane Diterpenes, Norlabdane Diterpenes and Bis-Labdanic Diterpenes from the Zingiberaceae: A Systematic Review. Pharmaceuticals (Basel) 2022;15:ph15121517. [PMID: 36558968 PMCID: PMC9783331 DOI: 10.3390/ph15121517] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Revised: 11/12/2022] [Accepted: 12/01/2022] [Indexed: 12/12/2022]  Open
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