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For: Berlemont R, Allison SD, Weihe C, Lu Y, Brodie EL, Martiny JBH, Martiny AC. Cellulolytic potential under environmental changes in microbial communities from grassland litter. Front Microbiol 2014;5:639. [PMID: 25505459 PMCID: PMC4243572 DOI: 10.3389/fmicb.2014.00639] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2014] [Accepted: 11/06/2014] [Indexed: 12/02/2022]  Open
Number Cited by Other Article(s)
1
Khrennikov A, Iryama S, Basieva I, Sato K. Quantum-like environment adaptive model for creation of phenotype. Biosystems 2024;242:105261. [PMID: 38964651 DOI: 10.1016/j.biosystems.2024.105261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2024] [Revised: 06/26/2024] [Accepted: 06/26/2024] [Indexed: 07/06/2024]
2
Abdoli P, Vulin C, Lepiz M, Chase AB, Weihe C, Rodríguez-Verdugo A. Substrate complexity buffers negative interactions in a synthetic community of leaf litter degraders. FEMS Microbiol Ecol 2024;100:fiae102. [PMID: 39020097 PMCID: PMC11289631 DOI: 10.1093/femsec/fiae102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2024] [Revised: 07/02/2024] [Accepted: 07/16/2024] [Indexed: 07/19/2024]  Open
3
Bautista-Cruz A, Aquino-Bolaños T, Hernández-Canseco J, Quiñones-Aguilar EE. Cellulolytic Aerobic Bacteria Isolated from Agricultural and Forest Soils: An Overview. BIOLOGY 2024;13:102. [PMID: 38392320 PMCID: PMC10886624 DOI: 10.3390/biology13020102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2024] [Revised: 01/29/2024] [Accepted: 01/31/2024] [Indexed: 02/24/2024]
4
Barbour KM, Martiny JBH. Investigating eco-evolutionary processes of microbial community assembly in the wild using a model leaf litter system. THE ISME JOURNAL 2024;18:wrae043. [PMID: 38506671 PMCID: PMC11008689 DOI: 10.1093/ismejo/wrae043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 02/13/2024] [Accepted: 03/19/2024] [Indexed: 03/21/2024]
5
Likar M, Grašič M, Stres B, Regvar M, Gaberščik A. Metagenomics reveals effects of fluctuating water conditions on functional pathways in plant litter microbial community. Sci Rep 2023;13:21741. [PMID: 38066117 PMCID: PMC10709317 DOI: 10.1038/s41598-023-49044-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Accepted: 12/04/2023] [Indexed: 12/18/2023]  Open
6
Zhang L, Li J, Wang Z, Zhang D, Liu H, Wang J, Wu F, Wang X, Zhou X. Litter mixing promoted decomposition and altered microbial community in common bean root litter. BMC Microbiol 2023;23:148. [PMID: 37217839 DOI: 10.1186/s12866-023-02871-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2022] [Accepted: 04/24/2023] [Indexed: 05/24/2023]  Open
7
Wang Y, Zhang X, Lou Z, An X, Li X, Jiang X, Wang W, Zhao H, Fu M, Cui Z. The effects of adding exogenous lignocellulose degrading bacteria during straw incorporation in cold regions on degradation characteristics and soil indigenous bacteria communities. Front Microbiol 2023;14:1141545. [PMID: 37234521 PMCID: PMC10206022 DOI: 10.3389/fmicb.2023.1141545] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2023] [Accepted: 04/21/2023] [Indexed: 05/28/2023]  Open
8
Kimeklis AK, Gladkov GV, Orlova OV, Afonin AM, Gribchenko ES, Aksenova TS, Kichko AA, Pinaev AG, Andronov EE. The Succession of the Cellulolytic Microbial Community from the Soil during Oat Straw Decomposition. Int J Mol Sci 2023;24:ijms24076342. [PMID: 37047311 PMCID: PMC10094526 DOI: 10.3390/ijms24076342] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Revised: 03/24/2023] [Accepted: 03/27/2023] [Indexed: 03/30/2023]  Open
9
Allison SD. Microbial drought resistance may destabilize soil carbon. Trends Microbiol 2023:S0966-842X(23)00078-1. [PMID: 37059647 DOI: 10.1016/j.tim.2023.03.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Revised: 02/09/2023] [Accepted: 03/02/2023] [Indexed: 04/16/2023]
10
Pisa JH, Hero JS, Romero HG, Martínez MA. A genome-proteome-based approach for xylan degradation by Cohnella sp. AR92. ENVIRONMENTAL MICROBIOLOGY REPORTS 2022;14:755-765. [PMID: 35940859 DOI: 10.1111/1758-2229.13113] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Accepted: 07/20/2022] [Indexed: 06/15/2023]
11
Palit K, Rath S, Chatterjee S, Das S. Microbial diversity and ecological interactions of microorganisms in the mangrove ecosystem: Threats, vulnerability, and adaptations. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022;29:32467-32512. [PMID: 35182344 DOI: 10.1007/s11356-022-19048-7] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2021] [Accepted: 01/31/2022] [Indexed: 06/14/2023]
12
De Novo Metagenomic Analysis of Microbial Community Contributing in Lignocellulose Degradation in Humus Samples Harvested from Cuc Phuong Tropical Forest in Vietnam. DIVERSITY 2022. [DOI: 10.3390/d14030220] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
13
Evans S, Allison S, Hawkes C. Microbes, memory, and moisture: predicting microbial moisture responses and their impact on carbon cycling. Funct Ecol 2022. [DOI: 10.1111/1365-2435.14034] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
14
Phylosymbiosis in the Rhizosphere Microbiome Extends to Nitrogen Cycle Functional Potential. Microorganisms 2021;9:microorganisms9122476. [PMID: 34946078 PMCID: PMC8709245 DOI: 10.3390/microorganisms9122476] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Revised: 11/18/2021] [Accepted: 11/22/2021] [Indexed: 12/04/2022]  Open
15
Bei Q, Moser G, Müller C, Liesack W. Seasonality affects function and complexity but not diversity of the rhizosphere microbiome in European temperate grassland. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021;784:147036. [PMID: 33895508 DOI: 10.1016/j.scitotenv.2021.147036] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2020] [Revised: 04/04/2021] [Accepted: 04/05/2021] [Indexed: 06/12/2023]
16
Djemiel C, Goulas E, Badalato N, Chabbert B, Hawkins S, Grec S. Targeted Metagenomics of Retting in Flax: The Beginning of the Quest to Harness the Secret Powers of the Microbiota. Front Genet 2020;11:581664. [PMID: 33193706 PMCID: PMC7652851 DOI: 10.3389/fgene.2020.581664] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Accepted: 09/21/2020] [Indexed: 12/13/2022]  Open
17
Drought and plant litter chemistry alter microbial gene expression and metabolite production. ISME JOURNAL 2020;14:2236-2247. [PMID: 32444813 PMCID: PMC7608424 DOI: 10.1038/s41396-020-0683-6] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/17/2019] [Revised: 05/05/2020] [Accepted: 05/12/2020] [Indexed: 12/13/2022]
18
Garcia MO, Templer PH, Sorensen PO, Sanders-DeMott R, Groffman PM, Bhatnagar JM. Soil Microbes Trade-Off Biogeochemical Cycling for Stress Tolerance Traits in Response to Year-Round Climate Change. Front Microbiol 2020;11:616. [PMID: 32477275 PMCID: PMC7238748 DOI: 10.3389/fmicb.2020.00616] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2019] [Accepted: 03/19/2020] [Indexed: 01/16/2023]  Open
19
Malik AA, Martiny JBH, Brodie EL, Martiny AC, Treseder KK, Allison SD. Defining trait-based microbial strategies with consequences for soil carbon cycling under climate change. THE ISME JOURNAL 2020;14:1-9. [PMID: 31554911 PMCID: PMC6908601 DOI: 10.1038/s41396-019-0510-0] [Citation(s) in RCA: 261] [Impact Index Per Article: 65.3] [Reference Citation Analysis] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/17/2018] [Revised: 06/07/2019] [Accepted: 08/16/2019] [Indexed: 12/22/2022]
20
Zhang X, Ma B, Liu J, Chen X, Li S, Su E, Gao L, Li H. β-Glucosidase genes differentially expressed during composting. BIOTECHNOLOGY FOR BIOFUELS 2020;13:174. [PMID: 33088344 PMCID: PMC7570026 DOI: 10.1186/s13068-020-01813-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2020] [Accepted: 10/07/2020] [Indexed: 05/06/2023]
21
López-Mondéjar R, Algora C, Baldrian P. Lignocellulolytic systems of soil bacteria: A vast and diverse toolbox for biotechnological conversion processes. Biotechnol Adv 2019;37:107374. [DOI: 10.1016/j.biotechadv.2019.03.013] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Revised: 03/06/2019] [Accepted: 03/21/2019] [Indexed: 12/12/2022]
22
Adair KL, Lindgreen S, Poole AM, Young LM, Bernard-Verdier M, Wardle DA, Tylianakis JM. Above and belowground community strategies respond to different global change drivers. Sci Rep 2019;9:2540. [PMID: 30796259 PMCID: PMC6385336 DOI: 10.1038/s41598-019-39033-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2018] [Accepted: 01/11/2019] [Indexed: 02/01/2023]  Open
23
Treseder KK, Berlemont R, Allison SD, Martiny AC. Drought increases the frequencies of fungal functional genes related to carbon and nitrogen acquisition. PLoS One 2018;13:e0206441. [PMID: 30462680 PMCID: PMC6248904 DOI: 10.1371/journal.pone.0206441] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2018] [Accepted: 10/14/2018] [Indexed: 12/16/2022]  Open
24
Decomposition responses to climate depend on microbial community composition. Proc Natl Acad Sci U S A 2018;115:11994-11999. [PMID: 30397146 DOI: 10.1073/pnas.1811269115] [Citation(s) in RCA: 113] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
25
Peces M, Astals S, Jensen PD, Clarke WP. Deterministic mechanisms define the long-term anaerobic digestion microbiome and its functionality regardless of the initial microbial community. WATER RESEARCH 2018;141:366-376. [PMID: 29807319 DOI: 10.1016/j.watres.2018.05.028] [Citation(s) in RCA: 57] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2018] [Revised: 05/16/2018] [Accepted: 05/16/2018] [Indexed: 06/08/2023]
26
Xue WL, Pan W, Lu Q, Xu QR, Wu CN, Du ST. Aquatic plant debris changes sediment enzymatic activity and microbial community structure. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2018;25:21801-21810. [PMID: 29796882 DOI: 10.1007/s11356-018-2310-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2017] [Accepted: 05/13/2018] [Indexed: 06/08/2023]
27
Zimudzi J, van der Waals JE, Coutinho TA, Cowan DA, Valverde A. Temporal shifts of fungal communities in the rhizosphere and on tubers in potato fields. Fungal Biol 2018;122:928-934. [PMID: 30115327 DOI: 10.1016/j.funbio.2018.05.008] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2017] [Revised: 05/24/2018] [Accepted: 05/29/2018] [Indexed: 10/14/2022]
28
Yang Y, Dou Y, An S. Testing association between soil bacterial diversity and soil carbon storage on the Loess Plateau. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018;626:48-58. [PMID: 29335174 DOI: 10.1016/j.scitotenv.2018.01.081] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2017] [Revised: 12/20/2017] [Accepted: 01/09/2018] [Indexed: 06/07/2023]
29
Liu J, Li C, Jing J, Zhao P, Luo Z, Cao M, Ma Z, Jia T, Chai B. Ecological patterns and adaptability of bacterial communities in alkaline copper mine drainage. WATER RESEARCH 2018;133:99-109. [PMID: 29367051 DOI: 10.1016/j.watres.2018.01.014] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2017] [Revised: 12/31/2017] [Accepted: 01/05/2018] [Indexed: 06/07/2023]
30
Sanyal A, Antony R, Samui G, Thamban M. Microbial communities and their potential for degradation of dissolved organic carbon in cryoconite hole environments of Himalaya and Antarctica. Microbiol Res 2018;208:32-42. [PMID: 29551210 DOI: 10.1016/j.micres.2018.01.004] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2017] [Revised: 01/04/2018] [Accepted: 01/13/2018] [Indexed: 02/03/2023]
31
Nguyen STC, Freund HL, Kasanjian J, Berlemont R. Function, distribution, and annotation of characterized cellulases, xylanases, and chitinases from CAZy. Appl Microbiol Biotechnol 2018;102:1629-1637. [PMID: 29359269 DOI: 10.1007/s00253-018-8778-y] [Citation(s) in RCA: 71] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2017] [Revised: 01/06/2018] [Accepted: 01/09/2018] [Indexed: 11/30/2022]
32
Hartman WH, Ye R, Horwath WR, Tringe SG. A genomic perspective on stoichiometric regulation of soil carbon cycling. THE ISME JOURNAL 2017;11:2652-2665. [PMID: 28731470 PMCID: PMC5702722 DOI: 10.1038/ismej.2017.115] [Citation(s) in RCA: 49] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2017] [Revised: 05/19/2017] [Accepted: 05/25/2017] [Indexed: 02/01/2023]
33
Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits. mBio 2017;8:mBio.01809-17. [PMID: 29138307 PMCID: PMC5686540 DOI: 10.1128/mbio.01809-17] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
34
Maltz MR, Treseder KK, McGuire KL. Links between plant and fungal diversity in habitat fragments of coastal shrubland. PLoS One 2017;12:e0184991. [PMID: 28926606 PMCID: PMC5604993 DOI: 10.1371/journal.pone.0184991] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2017] [Accepted: 09/04/2017] [Indexed: 12/03/2022]  Open
35
Lewin GR, Carlos C, Chevrette MG, Horn HA, McDonald BR, Stankey RJ, Fox BG, Currie CR. Evolution and Ecology of Actinobacteria and Their Bioenergy Applications. Annu Rev Microbiol 2017;70:235-54. [PMID: 27607553 DOI: 10.1146/annurev-micro-102215-095748] [Citation(s) in RCA: 160] [Impact Index Per Article: 22.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
36
Polysaccharide Degradation Capability of Actinomycetales Soil Isolates from a Semiarid Grassland of the Colorado Plateau. Appl Environ Microbiol 2017;83:AEM.03020-16. [PMID: 28087533 DOI: 10.1128/aem.03020-16] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2016] [Accepted: 01/10/2017] [Indexed: 02/03/2023]  Open
37
Martiny JBH, Martiny AC, Weihe C, Lu Y, Berlemont R, Brodie EL, Goulden ML, Treseder KK, Allison SD. Microbial legacies alter decomposition in response to simulated global change. THE ISME JOURNAL 2017;11:490-499. [PMID: 27740610 PMCID: PMC5270563 DOI: 10.1038/ismej.2016.122] [Citation(s) in RCA: 64] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/16/2016] [Revised: 07/11/2016] [Accepted: 08/05/2016] [Indexed: 01/19/2023]
38
Mello BL, Alessi AM, Riaño-Pachón DM, deAzevedo ER, Guimarães FEG, Espirito Santo MC, McQueen-Mason S, Bruce NC, Polikarpov I. Targeted metatranscriptomics of compost-derived consortia reveals a GH11 exerting an unusual exo-1,4-β-xylanase activity. BIOTECHNOLOGY FOR BIOFUELS 2017;10:254. [PMID: 29118851 PMCID: PMC5667448 DOI: 10.1186/s13068-017-0944-4] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2017] [Accepted: 10/24/2017] [Indexed: 05/09/2023]
39
Berlemont R, Martiny AC. Glycoside Hydrolases across Environmental Microbial Communities. PLoS Comput Biol 2016;12:e1005300. [PMID: 27992426 PMCID: PMC5218504 DOI: 10.1371/journal.pcbi.1005300] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Revised: 01/06/2017] [Accepted: 12/11/2016] [Indexed: 11/25/2022]  Open
40
Chase AB, Arevalo P, Polz MF, Berlemont R, Martiny JBH. Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium. Front Microbiol 2016;7:1874. [PMID: 27920771 PMCID: PMC5118839 DOI: 10.3389/fmicb.2016.01874] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2016] [Accepted: 11/07/2016] [Indexed: 12/30/2022]  Open
41
Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems. Sci Rep 2016;6:25279. [PMID: 27125755 PMCID: PMC4850484 DOI: 10.1038/srep25279] [Citation(s) in RCA: 192] [Impact Index Per Article: 24.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Accepted: 04/14/2016] [Indexed: 12/22/2022]  Open
42
Genomic potential for polysaccharide deconstruction in bacteria. Appl Environ Microbiol 2016;81:1513-19. [PMID: 25527556 DOI: 10.1128/aem.03718-14] [Citation(s) in RCA: 93] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
43
Talamantes D, Biabini N, Dang H, Abdoun K, Berlemont R. Natural diversity of cellulases, xylanases, and chitinases in bacteria. BIOTECHNOLOGY FOR BIOFUELS 2016;9:133. [PMID: 27366206 PMCID: PMC4928363 DOI: 10.1186/s13068-016-0538-6] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2016] [Accepted: 05/31/2016] [Indexed: 05/16/2023]
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López-Mondéjar R, Zühlke D, Větrovský T, Becher D, Riedel K, Baldrian P. Decoding the complete arsenal for cellulose and hemicellulose deconstruction in the highly efficient cellulose decomposer Paenibacillus O199. BIOTECHNOLOGY FOR BIOFUELS 2016;9:104. [PMID: 27186238 PMCID: PMC4867992 DOI: 10.1186/s13068-016-0518-x] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2016] [Accepted: 05/04/2016] [Indexed: 05/11/2023]
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Logue JB, Findlay SEG, Comte J. Editorial: Microbial Responses to Environmental Changes. Front Microbiol 2015;6:1364. [PMID: 26696977 PMCID: PMC4667068 DOI: 10.3389/fmicb.2015.01364] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2015] [Accepted: 11/17/2015] [Indexed: 12/03/2022]  Open
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Nitrogen Cycling Potential of a Grassland Litter Microbial Community. Appl Environ Microbiol 2015;81:7012-22. [PMID: 26231641 DOI: 10.1128/aem.02222-15] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2015] [Accepted: 07/23/2015] [Indexed: 12/13/2022]  Open
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Microbial response to simulated global change is phylogenetically conserved and linked with functional potential. ISME JOURNAL 2015;10:109-18. [PMID: 26046258 DOI: 10.1038/ismej.2015.96] [Citation(s) in RCA: 83] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2015] [Revised: 04/30/2015] [Accepted: 05/03/2015] [Indexed: 11/08/2022]
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Microbiota Dynamics Associated with Environmental Conditions and Potential Roles of Cellulolytic Communities in Traditional Chinese Cereal Starter Solid-State Fermentation. Appl Environ Microbiol 2015;81:5144-56. [PMID: 26002897 DOI: 10.1128/aem.01325-15] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2015] [Accepted: 05/16/2015] [Indexed: 12/25/2022]  Open
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Temporal variation overshadows the response of leaf litter microbial communities to simulated global change. ISME JOURNAL 2015;9:2477-89. [PMID: 25978544 DOI: 10.1038/ismej.2015.58] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2014] [Revised: 03/06/2015] [Accepted: 03/13/2015] [Indexed: 01/13/2023]
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