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Wu S, Huo H, Shi Y, Zhang F, Gu T, Li Z. Extraction and application of extracellular polymeric substances from fungi. ADVANCES IN APPLIED MICROBIOLOGY 2023; 125:79-106. [PMID: 38783725 DOI: 10.1016/bs.aambs.2023.08.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2024]
Abstract
Extracellular polymeric substances (EPS) are extracellular metabolites of microorganisms, highly associated with microbial function, adaptation, and growth. The main compounds in EPS have been revealed to be proteins, polysaccharides, nucleic acids, humic substances, lipids, etc. EPS are not only biomass, but also a biogenic material. EPS have high specific surface, abundant functional groups, and excellent degradability. In addition, they are more extensible to the environment than the microbial cells themselves, which exhibits their huge advantages. Therefore, they have been applied in many fields, such as the environment, ecosystem, basic commodities, and medicine. However, the functions of EPS highly depend on the suitable extraction process, as different extraction methods have different effects on their composition, structure, and function. There are many types of EPS extraction methods, in which physical and chemical methods have been widely utilized. This review summarizes the extraction methods and applications of EPS. In addition, it considers some important gaps in current knowledge, and indicates perspectives of EPS for their future study.
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Affiliation(s)
- Sijia Wu
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, P.R. China
| | - Hongxun Huo
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, P.R. China
| | - Yixiao Shi
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, P.R. China
| | - Feiran Zhang
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, P.R. China
| | - Tingting Gu
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, Jiangsu, P.R. China
| | - Zhen Li
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, P.R. China; Ministry of Natural Resources National Research Center for Geoanalysis, Key Laboratory of Eco-geochemistry, Beijing, P.R. China; Jiangsu Provincial Key Lab of Organic Solid Waste Utilization, Nanjing Agricultural University, Nanjing, P.R. China.
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Segura A, Molina L. LuxR402 of Novosphingobium sp. HR1a regulates the correct configuration of cell envelopes. Front Microbiol 2023; 14:1205860. [PMID: 37577419 PMCID: PMC10413115 DOI: 10.3389/fmicb.2023.1205860] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2023] [Accepted: 07/10/2023] [Indexed: 08/15/2023] Open
Abstract
Although there is some evidence to suggest that LuxR-solo proteins participate in inter-species or even inter-kingdom communication, most of the LuxR-solo protein functions are unknown. We have characterized the LuxR402 regulator of Novosphingobium sp. HR1a, a bacterial strain with the ability to establish high numbers in the plant rhizosphere and able to degrade a wide range of polycyclic aromatic hydrocarbons. LuxR402 controls the aggregation state of the bacterial culture; cultures of a mutant strain lacking this regulator flocculate in less than 3 h without agitation. We have demonstrated that the bacterial surface of the mutant is highly hydrophobic and that the mutant cells assimilate sugars slower than the wild-type. The flocculation mechanism has been demonstrated to be involved in the survival of the strain under unfavorable conditions; the luxR402 gene is repressed and produces flocculation in the presence of salicylate, a substrate that, although being assimilated by Novosphingobium, is toxic to cells at high concentrations. The flocculation of cultures in industrial setups has mainly been achieved through the addition of chemicals; these studies open up the possibility of controlling the flocculation by regulating the level of expression of the luxR402 gene.
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Affiliation(s)
| | - Lázaro Molina
- Environmental Protection Department, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Madrid, Spain
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Mohamed Hatta NS, Lau SW, Chua HB, Takeo M, Sen TK, Mubarak NM, Khalid M, Zairin DA. Parametric and kinetic studies of activated sludge dewatering by cationic chitosan-like bioflocculant BF01314 produced from Citrobacter youngae. ENVIRONMENTAL RESEARCH 2023; 224:115527. [PMID: 36822539 DOI: 10.1016/j.envres.2023.115527] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Accepted: 02/18/2023] [Indexed: 06/18/2023]
Abstract
Bacterial strains belonging to Citrobacter spp. were reported to produce polysaccharides consisting of N-acetylglucosamine and glucosamine like chitosan, with high flocculation activity. In this work, the flocculation dewatering performance of activated sludge conditioned by a novel cationic chitosan-like bioflocculant (BF) named BF01314, produced from Citrobacter youngae GTC 01314, was evaluated under the influences of flocculant dosage, pH, and temperature. At BF dosage as low as 0.5 kg/t DS, the sludge dewaterability was significantly enhanced in comparison to the raw (untreated) sludge, featuring well-flocculated characteristic (reduction in CST from 22.0 s to 9.4 s) and good sludge filterability with reduced resistance (reduction in SRF by one order from 7.42 × 1011 to 9.59 × 1010 m/kg) and increased compactness of sludge (increase in CSC from 15.2 to 23.2%). Besides, the BF demonstrated comparable high sludge dewatering performance within the pH range between 2 and 8, and temperature range between 25 °C and 80 °C. Comparison between the BF, the pristine chitosan and the commercial cationic copolymer MF 7861 demonstrated equivalent performance with enhanced dewaterability at the dosage between 2.0 and 3.0 kg/t DS. Besides, the BF demonstrated strong flocculation activity (>99%) when added to the sludge suspension using moderate to high flocculation speeds (100-200 rpm) with at least 3-min mixing time. The BF's reaction in sludge flocculation was best fitted with a pseudo first-order kinetic model. Electrostatic charge patching and polymer bridging mechanisms are believed to be the dominant mechanistic phenomena during the BF's sludge conditioning process (coagulation-flocculation).
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Affiliation(s)
- Nur Syahirah Mohamed Hatta
- Department of Chemical and Energy Engineering, Curtin University Malaysia, CDT 250, 98009 Miri, Sarawak, Malaysia
| | - Shiew Wei Lau
- Department of Chemical and Energy Engineering, Curtin University Malaysia, CDT 250, 98009 Miri, Sarawak, Malaysia.
| | - Han Bing Chua
- Department of Chemical and Energy Engineering, Curtin University Malaysia, CDT 250, 98009 Miri, Sarawak, Malaysia
| | - Masahiro Takeo
- Department of Applied Chemistry, Graduate School of Engineering, University of Hyogo, 2167 Shosha, Himeji, Hyogo 671-2280, Japan
| | - Tushar Kanti Sen
- Chemical Engineering Department, King Faisal University, Hofuf, Al-Ahsa 31982, Saudi Arabia
| | - Nabisab Mujawar Mubarak
- Petroleum and Chemical Engineering, Faculty of Engineering, Universiti Teknologi Brunei, Bandar Seri Begawan BE1410, Brunei Darussalam.
| | - Mohammad Khalid
- Graphene and Advanced 2D Materials Research Group (GAMRG), School of Engineering and Technology, Sunway University, No. 5, Jalan Universiti, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia; Uttaranchal University, Dehradun, 248007 Uttarakhand, India
| | - Danial Aminin Zairin
- Graphene and Advanced 2D Materials Research Group (GAMRG), School of Engineering and Technology, Sunway University, No. 5, Jalan Universiti, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia
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Baria DM, Patel NY, Yagnik SM, Panchal RR, Rajput KN, Raval VH. Exopolysaccharides from marine microbes with prowess for environment cleanup. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:76611-76625. [PMID: 36166130 DOI: 10.1007/s11356-022-23198-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 09/19/2022] [Indexed: 06/16/2023]
Abstract
A variety of both small and large biologically intriguing compounds can be found abundantly in the marine environment. Researchers are particularly interested in marine bacteria because they can produce classes of bioactive secondary metabolites that are structurally diverse. The main secondary metabolites produced by marine bacteria are regarded as steroids, alkaloids, peptides, terpenoids, biopolymers, and polyketides. The global urbanization leads to the increased use of organic pollutants that are both persistent and toxic for humans, other life forms and tend to biomagnified in environment. The issue can be addressed, by using marine microbial biopolymers with ability for increased bioremediation. Amongst biopolymers, the exopolysaccharides (EPS) are the most prominent under adverse environmental stress conditions. The present review emphasizes the use of EPS as a bio-flocculent for wastewater treatment, as an adsorbent for the removal of textile dye and heavy metals from industrial effluents. The biofilm-forming ability of EPS helps with soil reclamation and reduces soil erosion. EPS are an obvious choice being environmentally friendly and cost-effective in processes for developing sustainable technology. However, a better understanding of EPS biosynthetic pathways and further developing novel sustainable technologies is desirable and certainly will pave the way for efficient usage of EPS for environment cleanup.
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Affiliation(s)
- Dhritiksha Mansukhlal Baria
- Department of Microbiology and Biotechnology, University School of Sciences, Gujarat University, 380 009, Ahmedabad, Gujarat, India
| | - Nidhi Yogeshbhai Patel
- Department of Microbiology and Biotechnology, University School of Sciences, Gujarat University, 380 009, Ahmedabad, Gujarat, India
| | | | - Rakeshkumar Ramanlal Panchal
- Department of Microbiology and Biotechnology, University School of Sciences, Gujarat University, 380 009, Ahmedabad, Gujarat, India
| | - Kiransinh Narendrasinh Rajput
- Department of Microbiology and Biotechnology, University School of Sciences, Gujarat University, 380 009, Ahmedabad, Gujarat, India
| | - Vikram Hiren Raval
- Department of Microbiology and Biotechnology, University School of Sciences, Gujarat University, 380 009, Ahmedabad, Gujarat, India.
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Gurav R, Bhatia SK, Choi TR, Hyun Cho D, Chan Kim B, Hyun Kim S, Ju Jung H, Joong Kim H, Jeon JM, Yoon JJ, Yun J, Yang YH. Lignocellulosic hydrolysate based biorefinery for marine exopolysaccharide production and application of the produced biopolymer in environmental clean-up. BIORESOURCE TECHNOLOGY 2022; 359:127499. [PMID: 35718248 DOI: 10.1016/j.biortech.2022.127499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2022] [Revised: 06/11/2022] [Accepted: 06/15/2022] [Indexed: 06/15/2023]
Abstract
The present study deals with the utilization of lignocellulosic hydrolysate-based carbon source for exopolysaccharide (EPS) production using newly reported marine Echinicola sediminis BBL-M-12. This bacterium produced 7.56 g L-1 and 5.32 g L-1 of EPS on supplementing 30 g L-1 glucose and 10 g L-1 xylose as the sole carbon source, respectively. Whereas on feeding Miscanthus hydrolysate (MCH) with glucose content adjusting to 20 g L-1, E. sediminis BBL-M-12 produced 6.18 g L-1 of EPS. The inhibitors study showed bacterium could tolerate higher concentrations of fermentation inhibitors include furfural (0.05%), 5-hydroxymethylfurfural (0.1%), vanillin (0.1%) and acetate (0.5%). Moreover, the EPS composition was greatly altered with the type and concentration of carbon source supplied, although β-D-Glucopyranose, β-D-Galactopyranose, and β-D-Xylopyranose were the dominant monomers detected. Interestingly, E. sediminis BBL-M-12 EPS revealed excellent environmental applications like clay flocculation, oil emulsification, and removal of humic acid, textile dye, and heavy metal from the aqueous phase.
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Affiliation(s)
- Ranjit Gurav
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Shashi Kant Bhatia
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Tae-Rim Choi
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Do Hyun Cho
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Byung Chan Kim
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Su Hyun Kim
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Hee Ju Jung
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Hyun Joong Kim
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Jong-Min Jeon
- Green & Sustainable Materials R&D Department, Research Institute of Clean Manufacturing System, Korea Institute of Industrial Technology (KITECH), Chungnam 31056, Republic of Korea
| | - Jeong-Jun Yoon
- Green & Sustainable Materials R&D Department, Research Institute of Clean Manufacturing System, Korea Institute of Industrial Technology (KITECH), Chungnam 31056, Republic of Korea
| | - Jeonghee Yun
- Department of Forest Products and Biotechnology, Kookmin University, Seoul 02707, Republic of Korea
| | - Yung-Hun Yang
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea.
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Chen S, Cheng R, Xu X, Kong C, Wang L, Fu R, Li J, Wang S, Zhang J. The structure and flocculation characteristics of a novel exopolysaccharide from a Paenibacillus isolate. Carbohydr Polym 2022; 291:119561. [DOI: 10.1016/j.carbpol.2022.119561] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2021] [Revised: 02/28/2022] [Accepted: 04/28/2022] [Indexed: 11/30/2022]
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Isolation of a Marine Bacterium and Application of Its Bioflocculant in Wastewater Treatment. MICROBIOLOGY RESEARCH 2022. [DOI: 10.3390/microbiolres13030041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Bioflocculation has become the method of choice in wastewater treatment because of its effectiveness, environmental friendliness and innocuousness to humans. In this study, the bioflocculant-producing bacterium was isolated and its bioflocculant was used in wastewater treatment. The isolate was identified by 16S rRNA gene sequencing analysis. Its culture conditions (inoculum size, carbon and nitrogen sources, pH, temperature and time) were optimised using the one-factor-at-a-time assay. The cytotoxicity of the bioflocculant was assessed on human colorectal adenocarcinoma cells (Caco2) by tetrazolium-based colorimetric method. The ability of the bioflocculant to reduce biochemical oxygen demand (BOD) and chemical oxygen demand (COD) in wastewater was evaluated using Jar test. The bacterium was identified as Bacillus subtilis CSM5 and the maximum flocculating activity of 92% was observed when fructose and urea were used as nutrients and the culture conditions were adjusted to 30 °C, pH 9, 160 rpm and 72 h of incubation. Caco2 exhibited 90% viability when the highest bioflocculant concentration of 200 µg/µL was used. The reduction of BOD and COD was achieved at 59 ± 3.1 and 75 ± 0.4%, respectively. In conclusion, B. subtilis CSM5 is a good candidate for bioflocculant production and its bioflocculant has good potential for use in wastewater treatment.
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Selepe TN, Maliehe TS, Moganedi K, Masoko P, Mulaudzi V. Isolation and Optimisation of Culture Conditions for a Marine Bioflocculant-Producing Bacterium and Application of Its Bioflocculant in Wastewater Treatment. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:10237. [PMID: 36011872 PMCID: PMC9408499 DOI: 10.3390/ijerph191610237] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 08/03/2022] [Accepted: 08/05/2022] [Indexed: 06/15/2023]
Abstract
The application of bioflocculants has become an alternative to that of chemical flocculants in wastewater treatment due to their environmental friendliness and non-toxic effects. This study aimed at isolating a bioflocculant-producing bacterium from marine water, optimisation of its culture conditions, and investigation of the removal efficiency of its bioflocculant on pollutants in wastewater. The bacterium was identified by 16S rRNA gene analysis. Optimal carbon and nitrogen sources, inoculum size, temperature, pH, and time were determined by the one-factor-at-a-time assay. The cytotoxicity of the bioflocculant was assessed on African green monkey kidney and bovine dermis cells using a tetrazolium-based columetric (MTT) method. Its removal efficiencies on chemical oxygen demand (COD), biological oxygen demand (BOD) and sulphur were determined using the Jar test method. The bacterial isolate was identified as Ochrobactrum oryzae AB84113. A maximum flocculating activity of 92% and a yield of 3.768 g/L were obtained when a 1% (v/v) inoculum size was used in the presence of starch and yeast extract at pH 7, 30 °C, and after 72 h of cultivation. The bioflocculant demonstrated non-cytotoxic effects on bovine dermis and African green monkey kidney cells. The bioflocculant removed 98% COD, 91% BOD and 86% of Sulphur. The bioflocculant has potential for pollutant removal from industrial wastewater.
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Affiliation(s)
- Tlou Nelson Selepe
- Department of Water and Sanitation, University of Limpopo, Private Bag X1106, Polokwane 0727, South Africa
| | - Tsolanku Sidney Maliehe
- Department of Biochemistry, Microbiology and Biotechnology, University of Limpopo, Private Bag X1106, Polokwane 0727, South Africa
| | - Kgabo Moganedi
- Department of Biochemistry, Microbiology and Biotechnology, University of Limpopo, Private Bag X1106, Polokwane 0727, South Africa
| | - Peter Masoko
- Department of Biochemistry, Microbiology and Biotechnology, University of Limpopo, Private Bag X1106, Polokwane 0727, South Africa
| | - Vusimuzi Mulaudzi
- Department of Chemistry, University of Limpopo, Private Bag X1106, Polokwane 0727, South Africa
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Ntombela ZG, Pullabhotla VSR, Basson AK. Biosafety, Optimization, and Application of Bioflocculant-Synthesized Zinc Oxide Nanoparticles. BIONANOSCIENCE 2022. [DOI: 10.1007/s12668-022-01017-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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Zhang J, Chen Y, Zhang J, Wang Y, Liu Y. The Regulation of Micro-Organisms' Extra-Cellular Polysaccharides on Immunity: A Meta-Analysis. Foods 2022; 11:foods11131949. [PMID: 35804765 PMCID: PMC9265815 DOI: 10.3390/foods11131949] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Revised: 05/17/2022] [Accepted: 06/23/2022] [Indexed: 12/10/2022] Open
Abstract
Extra-cellular polysaccharides (EPSs) have excellent immunomodulatory functions. In order to further promote their application, we studied the ability of extra-cellular polysaccharides from different sources to regulate immunity. We studied the association of extra-cellular polysaccharides with immune factors (Interleukin (IL-2, IL-4, IL-10), Interferon γ (IFN-γ), tumor necrosis factor-α (TNF-α), Immunoglobulin A (IgA), and Immunoglobulin G (IgG)) and different concentrations of EPSs and interfering media on experimental results by using a forest plot under fixed-effect or random-effects models. Through Google, PubMed, Embase, ScienceDirect, and Medline, from 2000 to 2021, 12 articles were included. We found that exopolysaccharides (from bacteria or fungi) could significantly increase the immune index of spleen and thymus, spleen index (SMD: 2.11, ‘95%CI: [1.15, 3.08]’; p < 0.01), and thymus index (SMD: 1.62, ‘95%CI: [0.93, 2.32]’; p = 0.01 < 0.05). In addition, exopolysaccharides had a significant effect on TNF-α (SMD: 0.94, ‘95%CI: [0.29, 1.59]’; p = 0.01 < 0.05). For IL-4 (SMD: 0.49, ‘95%CI: [0.01, 0.98]’; p = 0.046 < 0.05), extra-cellular polysaccharides had a statistically significant effect on immunity. Although the data of other immune factors were not ideal, the comprehensive analysis showed that exopolysaccharides also had an effect on the release of these five immune factors. In the sub-group analysis, different concentrations of EPSs affected the results of experiments on the spleen and thymus, and the CY intervention had a relatively significant effect on immune regulation. Taken together, our study highlighted that EPSs have a significant impact on immune regulation.
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Affiliation(s)
- Jin Zhang
- Department of Food Science and Engineering, Ningbo University, Ningbo 315211, China; (J.Z.); (J.Z.); (Y.W.)
| | - Yirui Chen
- Department of Genetics, Bioinformatics and Computational Biology, Virginia Polytechnic Institute and State University, Blacksburg, VA 24060, USA;
| | - Jiaqi Zhang
- Department of Food Science and Engineering, Ningbo University, Ningbo 315211, China; (J.Z.); (J.Z.); (Y.W.)
| | - Yitong Wang
- Department of Food Science and Engineering, Ningbo University, Ningbo 315211, China; (J.Z.); (J.Z.); (Y.W.)
| | - Yanan Liu
- Department of Food Science and Engineering, Ningbo University, Ningbo 315211, China; (J.Z.); (J.Z.); (Y.W.)
- Correspondence:
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Sodhi AS, Sharma N, Bhatia S, Verma A, Soni S, Batra N. Insights on sustainable approaches for production and applications of value added products. CHEMOSPHERE 2022; 286:131623. [PMID: 34346348 DOI: 10.1016/j.chemosphere.2021.131623] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Revised: 07/18/2021] [Accepted: 07/19/2021] [Indexed: 06/13/2023]
Abstract
The increasing demand for the development of sustainable strategies to utilize and process agro-industrial residues paves new paths for exploring innovative approaches in this area. Biotechnology based microbial transformations provide efficient, low cost and sustainable approaches for the production of value added products. The use of organic rich residues opens new avenues for the production of enzymes, pigments, biofuels, bioactive compounds, biopolymers etc. with vast industrial and therapeutic applications. Innovative technologies like strain improvement, enzyme immobilization, genome editing, morphological engineering, ultrasound/supercritical fluid/pulse electric field extraction, etc. can be employed. These will be helpful in achieving significant improvement in qualitative and quantitative parameters of the finished products. The global trend for the valorisation of biowaste has boosted the commercialization of these products which has transformed the markets by providing new investment opportunities. The upstream processing of raw materials using microbes poses a limitation in terms of product development and recovery which can be overcome by modifying the bioreactor design, physiological parameters or employing alternate technologies which will be discussed in this review. The other problems related to the processes include product stability, industrial applicability and cost competitiveness which needs to be addressed. This review comprehensively discusses the recent progress, avenues and challenges in the approaches aimed at valorisation of agro-industrial wastes along with possible opportunities in the bioeconomy.
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Affiliation(s)
- Abhinashi Singh Sodhi
- Department of Biotechnology, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India
| | - Neetu Sharma
- Department of Biotechnology, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India
| | - Sonu Bhatia
- Department of Biotechnology, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India
| | - Anoop Verma
- School of Energy and Environment, Thapar Institute of Engineering and Technology, Patiala, Punjab, India
| | - Sajeev Soni
- Department of Chemistry, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India
| | - Navneet Batra
- Department of Biotechnology, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India.
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13
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Isolation, Identification and Characterization of Bioflocculant-Producing Bacteria from Activated Sludge of Vulindlela Wastewater Treatment Plant. Appl Microbiol 2021. [DOI: 10.3390/applmicrobiol1030038] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The low microbial flocculant yields and efficiencies limit their industrial applications. There is a need to identify bacteria with high bioflocculant production. The aim of this study was to isolate and identify a bioflocculant-producing bacterium from activated sludge wastewater and characterise its bioflocculant activity. The identification of the isolated bacterium was performed by 16S rRNA gene sequencing analysis. The optimal medium composition (carbon and nitrogen sources, cations and inoculum size) and culture conditions (temperature, pH, shaking speed and time) were evaluated by the one-factor-at-a-time method. The morphology, functional groups, crystallinity and pyrolysis profile of the bioflocculant were analysed using scanning electron microscope (SEM), Fourier transform infrared (FTIR) and thermogravimetric (TGA) analysis. The bacterium was identified as Proteus mirabilis AB 932526.1. Its optimal medium and culture conditions were: sucrose (20 g/L), yeast extract (1.2 g/L), MnCl2 (1 g/L), pH 6, 30 °C, inoculation volume (3%), shaking speed (120 rpm) for 72 h of cultivation. SEM micrograph revealed the bioflocculant to be amorphous. FTIR analysis indicated the presence of hydroxyl, carboxyl and amino groups. The bioflocculant was completely pyrolyzed at temperatures above 800 °C. The bacterium has potential to produce bioflocculant of industrial importance.
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Zhao H, Zheng Y, Wang Z, Xie W, Zhou J, Zhong C. Preparation of a bacterial flocculant by using caprolactam as a sole substrate and its application in amoxicillin removal. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 294:113026. [PMID: 34119990 DOI: 10.1016/j.jenvman.2021.113026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Revised: 05/08/2021] [Accepted: 06/04/2021] [Indexed: 06/12/2023]
Abstract
High cost is one of the limiting factors in the industrial production of bioflocculant. Simultaneous preparation of bioflocculant from the contaminants in wastewater was considered as a potential approach to reduce the production cost. In this study, caprolactam was verified as sole feedstock for the growth of strain Alcaligenes faecalis subsp. phenolicus ZY-16 in batch experiments. Chemical analysis showed that the as-prepared MBF-16 consisted of heteropolysaccharides (88.3%) and peptides (9.4%). XPS result indicated the plentiful acylamino, hydroxyl and amino groups in MBF-16, which have an indispensable role in amoxicillin flocculation. The flocculation of amoxicillin can be well stimulated by Freundlich isotherm equation, and the Kf was up to 178.6524 for amoxicillin. The kinetic fitting results proved that the flocculation of amoxicillin by MBF-16 was chemisorbed. This contribution may develop a novel technology for the preparation of bacterial flocculants that can consume toxic substrates (caprolactam) and have potential applications in amoxicillin removal.
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Affiliation(s)
- Haijuan Zhao
- School of Environmental Engineering, Wuhan Textile University, Wuhan, 430073, China; School of Mathematics and Economics, Hubei University of Education, Wuhan, 430205, China
| | - Yongliang Zheng
- Hubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization, Huanggang Normal University, Huanggang, 438000, China
| | - Ziyu Wang
- School of Environmental Engineering, Wuhan Textile University, Wuhan, 430073, China
| | - Weifeng Xie
- School of Environmental Engineering, Wuhan Textile University, Wuhan, 430073, China
| | - Jiangang Zhou
- School of Environmental Engineering, Wuhan Textile University, Wuhan, 430073, China; Engineering Research Centre for Clean Production of Textile Dyeing and Printing, Ministry of Education, Wuhan Textile University, Wuhan, 430073, China.
| | - Chunying Zhong
- Hubei Key Laboratory of Purification and Application of Plant Anti-Cancer Active Ingredients, Chemistry and Biology Science College, Hubei University of Education, Wuhan, 430205, China.
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15
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Saha S, Shukla SK, Singh HR, Pradhan KK, Jha SK. Production and purification of bioflocculants from newly isolated bacterial species: a comparative decolourization study of cationic and anionic textile dyes. ENVIRONMENTAL TECHNOLOGY 2021; 42:3663-3674. [PMID: 32114960 DOI: 10.1080/09593330.2020.1737737] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Accepted: 02/26/2020] [Indexed: 06/10/2023]
Abstract
Bioflocculant-producing bacteria were isolated from various water reservoirs and sediments of the water treatment plant. Four promising strains were identified by standard biochemical methods and 16s rRNA gene sequencing. Bioflocculants were produced in a batch bioreactor of 3 L under optimized conditions. Fourier transformed infrared spectroscopy and scanning electron microscopy (SEM) were used to confirm the chemical and morphological nature of bioflocculants. Anionic and cationic textile dyes congo red (CR) and rhodamine-B (RB) decolourization efficiency by ethanol precipitated bioflocculants were accessed under different values of pH, temperature, dose of flocculant and presence of monovalent, divalent and trivalent cations. Bioflocculants of all the four isolates were found to be highly efficient in decolourization of dye from an aqueous medium with the removal rate up to 99.56%. The removal rate of CR and RB from aqueous medium was largely influenced by the physiochemical condition of the solution viz. pH, temperature, concentration of ions and dose of flocculants. The microbial bioflocculants are biodegradable and highly stable as well as possess abroad range of pH, temperature and ions tolerance range. So, they may be economical and can be greener substitutes for the present harsh chemical-based wastewater effluent treatment methods.
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Affiliation(s)
- Swastika Saha
- Department of Bioengineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India
| | - Sushil Kumar Shukla
- Department of Transport Science and Technology, Central University of Jharkhand, Brambe, Ranchi, Jharkhand, India
| | - Hare Ram Singh
- Department of Bioengineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India
| | - Kishanta Kumar Pradhan
- Department of Pharmaceutical Science and Technology, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India
| | - Santosh Kumar Jha
- Department of Bioengineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India
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16
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He T, Hua JQ, Chen RP, Yu L. Adsorption characteristics of methylene blue by a dye-degrading and extracellular polymeric substance -producing strain. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 288:112446. [PMID: 33823435 DOI: 10.1016/j.jenvman.2021.112446] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Revised: 03/18/2021] [Accepted: 03/19/2021] [Indexed: 06/12/2023]
Abstract
Biosorption of dye by microbes and the extracellular polymeric substances (EPS) were of great environmental significance, especially for the dye-degrading and EPS-producing strain. Previous studies were mainly focused on the adsorption capacities and regeneration properties of pure culture, few were on the biosorption of dyes by the dye-degraders and the contributions of EPS on adsorption. In this study, a dye-degrading and EPS-producing strain i.e., Klebsiella oxytoca was used to evaluate its removal capacity to methylene blue. The maximum adsorption capacity (qe) by the strain was calculated as 145 mg g-1, which is superior to many reported bio-adsorbents and some synthetic materials. Fourier transform infrared spectroscopy and X-ray photoelectron spectroscopy results suggested that CO, -NH2 and P-OH groups were involved in the adsorption. High pressure steam sterilization (HPSS) increased the hydrophilicity of cell wall but did not significantly change the cell structure. Compared with the dead resting cell (DRC), the relative higher qe obtained by live resting cell (LRC) possibly due to the loss of some cell structure during the HPSS process. Adsorption experiments by EPS-free LRC, confocal laser microscope and three-dimensional excitation-emission matrix fluorescence spectroscopy results confirmed that the EPS played a role in the adsorption of MB dye. The adsorption characteristics of the dye-degrader and the contributions of EPS on adsorption were investigated in detail in this study. The results were benefit for better understanding of the interaction mechanisms between the dye molecules and cells that before the biodegradation process, which were of great significance for the practical usage of residual sludge on removal of dyes.
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Affiliation(s)
- Tao He
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing, 210037, China
| | - Jing-Qiu Hua
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing, 210037, China
| | - Rong-Ping Chen
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing, 210037, China
| | - Lei Yu
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing, 210037, China; School of Environmental Science, Nanjing XiaoZhuang University, Nanjing, 211171, China.
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17
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Liu C, Sun D, Liu J, Zhu J, Liu W. Recent advances and perspectives in efforts to reduce the production and application cost of microbial flocculants. BIORESOUR BIOPROCESS 2021; 8:51. [PMID: 38650196 PMCID: PMC10992557 DOI: 10.1186/s40643-021-00405-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2021] [Accepted: 06/08/2021] [Indexed: 01/09/2023] Open
Abstract
Microbial flocculants are macromolecular substances produced by microorganisms. Due to its non-toxic, harmless, and biodegradable advantages, microbial flocculants have been widely used in various industrial fields, such as wastewater treatment, microalgae harvest, activated sludge dewatering, heavy metal ion adsorption, and nanoparticle synthesis, especially in the post-treatment process of fermentation with high safety requirement. However, compared with the traditional inorganic flocculants and organic polymeric flocculants, the high production cost is the main bottleneck that restricts the large-scale production and application of microbial flocculants. To reduce the production cost of microbial flocculant, a series of efforts have been carried out and some exciting research progresses have been achieved. This paper summarized the research advances in the last decade, including the screening of high-yield strains and the construction of genetically engineered strains, search of cheap alternative medium, the extraction and preservation methods, microbial flocculants production as an incidental product of other biological processes, combined use of traditional flocculant and microbial flocculant, and the production of microbial flocculant promoted by inducer. Moreover, this paper prospects the future research directions to further reduce the production cost of microbial flocculants, thereby promoting the industrial production and large-scale application of microbial flocculants.
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Affiliation(s)
- Cong Liu
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China
| | - Di Sun
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China
| | - Jiawen Liu
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China
| | - Jingrong Zhu
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China
| | - Weijie Liu
- Jiangsu Key Laboratory of Phylogenomics & Comparative Genomics, School of Life Science, Jiangsu Normal University, No.101, Shanghai road, Tongshan New District, Xuzhou, 221116, Jiangsu, China.
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18
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Siddharth T, Sridhar P, Vinila V, Tyagi RD. Environmental applications of microbial extracellular polymeric substance (EPS): A review. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 287:112307. [PMID: 33798774 DOI: 10.1016/j.jenvman.2021.112307] [Citation(s) in RCA: 78] [Impact Index Per Article: 26.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2020] [Revised: 02/08/2021] [Accepted: 02/28/2021] [Indexed: 05/06/2023]
Abstract
During the last decade, water demand and wastewater generation has increased due to urbanization around the globe which had led to an increase in the utilization of chemicals/synthetic polymers for treating the wastewaters. These synthetic polymers used during the coagulation/flocculation process are non-renewable, non-biodegradable, and have a potential neurotoxic and carcinogenic effect. From the literature it is clear that extracellular polymer substance (EPS) is a potential bioflocculant, moreover it is renewable, biodegradable, eco-friendly, non-toxic as well as economically valued product. The various identification techniques and extraction methods of EPS are elaborated. Further application of EPS as absorbent in removing the dye from the industrial effluent is presented. Moreover EPS as a potential adsorbent for heavy metal removal from the various effluent is discussed. In addition, EPS is also utilized for soil remediation and soil erosion control. Mainly, EPS as bioflocculant in treating raw water, wastewater treatment, leachate and sludge management are summarized in this review.
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Affiliation(s)
- T Siddharth
- Water and Environment Division, Department of Civil Engineering National Institute of Technology - Warangal, Telangana, India
| | - P Sridhar
- Water and Environment Division, Department of Civil Engineering National Institute of Technology - Warangal, Telangana, India.
| | - V Vinila
- Water and Environment Division, Department of Civil Engineering National Institute of Technology - Warangal, Telangana, India
| | - R D Tyagi
- Chief Scientific Officer, BOSK Bioproducts, Canada
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19
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Ma J, Chen D, Zhang W, An Z, Zeng K, Yuan M, Shen J. Enhanced performance and degradation of wastewater in microbial fuel cells using titanium dioxide nanowire photocathodes. RSC Adv 2021; 11:2242-2252. [PMID: 35424157 PMCID: PMC8693704 DOI: 10.1039/d0ra08747e] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Accepted: 12/29/2020] [Indexed: 12/31/2022] Open
Abstract
This paper explores the decolorization of dye wastewaters and electricity generation using dual-chamber microbial fuel cells (MFCs) with titanium dioxide nanowire (TiO2 NW) photocathodes. TiO2 NW cathodes under ultraviolet light are observed to enhance the reduction of azo dye Active Red 30 (AR 30) and electricity generation. The analysis of electrochemical impedance spectra (EIS) indicates acceleration of the electron transfer processes of photoelectrode reduction by the photocatalysis of TiO2 NWs, with polarization resistance of the photocathode being 10.45 Ω under light irradiation from 294 Ω in the dark. Ultraviolet-visible light spectroscopy shows that the maximum degradation of the MFCs is 78.1%; the azo bond of AR 30 may be cleaved by photoelectrons generated by light irradiation of the illuminated TiO2 NW photocathode. The electricity produced by microbial fuel cells (MFCs) is expected to enhance the reductive decolorization of the azo dye AR 30 solution.
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Affiliation(s)
- Jingying Ma
- College of Chemical and Environmental Engineering, Shanghai Institute of Technology Shanghai 201418 China
| | - Donghui Chen
- College of Chemical and Environmental Engineering, Shanghai Institute of Technology Shanghai 201418 China
- College of Environmental Science and Engineering, Donghua University Shanghai 201620 China
- Institute of Foreign Languages, Shanghai DianJi University Shanghai 201306 China
| | - Wenwen Zhang
- College of Environmental Science and Engineering, Donghua University Shanghai 201620 China
| | - Zhihao An
- College of Chemical and Environmental Engineering, Shanghai Institute of Technology Shanghai 201418 China
| | - Ke Zeng
- College of Chemical and Environmental Engineering, Shanghai Institute of Technology Shanghai 201418 China
| | - Ming Yuan
- College of Chemical and Environmental Engineering, Shanghai Institute of Technology Shanghai 201418 China
| | - Jia Shen
- College of Chemical and Environmental Engineering, Shanghai Institute of Technology Shanghai 201418 China
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20
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Wu Z, He X, Gao Z, Xue Y, Chen X, Zhang L. Synthesis and characterization of Ni-doped anatase TiO 2 loaded on magnetic activated carbon for rapidly removing triphenylmethane dyes. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:3475-3483. [PMID: 32918691 DOI: 10.1007/s11356-020-10698-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2020] [Accepted: 08/31/2020] [Indexed: 06/11/2023]
Abstract
In this work, we employed the in situ synthesis method to implant Fe3O4 into activated carbon (AC), in which the synthesis of the magnetic AC (MAC) was realized. Thence, Ni-doped anatase TiO2 (NATiO2) were anchored on different addition amount of MAC to synthesize the series of Ni-TiO2/MAC photocatalysts. The chemical compositions and physical properties of these nanocomposites were analyzed by various characterization technologies. The photocatalytic capabilities of as-produced materials were then investigated via adsorption and photodegradation of triphenylmethane dyes (TPMs) as crystal violet (CV), basic fuchsine (BF), and malachite green (MG) solution. The results revealed that the removal of Ni-TiO2/AC, Ni-TiO2/2MAC, Ni-TiO2/4MAC, and Ni-TiO2/8MAC on TPMs is a very fast process and the removal efficiency can almost reach to about 90% in 10 min, and the catalyst has good cycle stability and is easy to be reused. This work provides a novel, low-cost, and effective way to rationally design and synthesize TiO2-based photocatalysts for effective removal of TPMs.
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Affiliation(s)
- Zhansheng Wu
- Xi'an Key Laboratory of Textile Chemical Engineering Auxiliaries, School of Environmental and Chemical Engineering, Xi'an Polytechnic University, Xi'an, 710048, People's Republic of China.
- School of Chemistry and Chemical Engineering, Shihezi University, Shihezi, 832003, People's Republic of China.
| | - Xiufang He
- School of Chemistry and Chemical Engineering, Shihezi University, Shihezi, 832003, People's Republic of China
| | - Zhenzhen Gao
- Xi'an Key Laboratory of Textile Chemical Engineering Auxiliaries, School of Environmental and Chemical Engineering, Xi'an Polytechnic University, Xi'an, 710048, People's Republic of China
| | - Yongtao Xue
- School of Chemistry and Chemical Engineering, Shihezi University, Shihezi, 832003, People's Republic of China
| | - Xin Chen
- School of Chemistry and Chemical Engineering, Shihezi University, Shihezi, 832003, People's Republic of China
| | - Luohong Zhang
- Xi'an Key Laboratory of Textile Chemical Engineering Auxiliaries, School of Environmental and Chemical Engineering, Xi'an Polytechnic University, Xi'an, 710048, People's Republic of China.
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21
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Maćczak P, Kaczmarek H, Ziegler-Borowska M. Recent Achievements in Polymer Bio-Based Flocculants for Water Treatment. MATERIALS (BASEL, SWITZERLAND) 2020; 13:E3951. [PMID: 32906667 PMCID: PMC7559979 DOI: 10.3390/ma13183951] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/22/2020] [Revised: 08/30/2020] [Accepted: 09/04/2020] [Indexed: 01/04/2023]
Abstract
Polymer flocculants are used to promote solid-liquid separation processes in potable water and wastewater treatment. Recently, bio-based flocculants have received a lot of attention due to their superior advantages over conventional synthetic polymers or inorganic agents. Among natural polymers, polysaccharides show many benefits such as biodegradability, non-toxicity, ability to undergo different chemical modifications, and wide accessibility from renewable sources. The following article provides an overview of bio-based flocculants and their potential application in water treatment, which may be an indication to look for safer alternatives compared to synthetic polymers. Based on the recent literature, a new approach in searching for biopolymer flocculants sources, flocculation mechanisms, test methods, and factors affecting this process are presented. Particular attention is paid to flocculants based on starch, cellulose, chitosan, and their derivatives because they are low-cost and ecological materials, accepted in industrial practice. New trends in water treatment technology, including biosynthetic polymers, nanobioflocculants, and stimulant-responsive flocculants are also considered.
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Affiliation(s)
- Piotr Maćczak
- Faculty of Chemistry, Nicolaus Copernicus University in Toruń, Gagarina 7, 87-100 Toruń, Poland; (P.M.); (M.Z.-B.)
- Water Supply and Sewage Enterprise LLC, Przemysłowa 4, 99-300 Kutno, Poland
| | - Halina Kaczmarek
- Faculty of Chemistry, Nicolaus Copernicus University in Toruń, Gagarina 7, 87-100 Toruń, Poland; (P.M.); (M.Z.-B.)
| | - Marta Ziegler-Borowska
- Faculty of Chemistry, Nicolaus Copernicus University in Toruń, Gagarina 7, 87-100 Toruń, Poland; (P.M.); (M.Z.-B.)
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22
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Yuan DH, Xing JF, Luan MW, Ji KK, Guo J, Xie SQ, Zhang YM. DNA N6-Methyladenine Modification in Wild and Cultivated Soybeans Reveals Different Patterns in Nucleus and Cytoplasm. Front Genet 2020; 11:736. [PMID: 32849778 PMCID: PMC7398112 DOI: 10.3389/fgene.2020.00736] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2019] [Accepted: 06/18/2020] [Indexed: 01/16/2023] Open
Abstract
DNA 6mA modification, an important newly discovered epigenetic mark, plays a crucial role in organisms and has been attracting more and more attention in recent years. The soybean is economically the most important bean in the world, providing vegetable protein for millions of people. However, the distribution pattern and function of 6mA in soybean are still unknown. In this study, we decoded 6mA modification to single-nucleotide resolution in wild and cultivated soybeans, and compared the 6mA differences between cytoplasmic and nuclear genomes and between wild and cultivated soybeans. The motif of 6mA in the nuclear genome was conserved across the two kinds of soybeans, and ANHGA was the most dominant motif in wild and cultivated soybeans. Genes with 6mA modification in the nucleus had higher expression than those without modification. Interestingly, 6mA distribution patterns in cytoplasm for each soybean were significantly different from those in nucleus, which was reported for the first time in soybean. Our research provides a new insight in the deep analysis of cytoplasmic genomic DNA modification in plants.
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Affiliation(s)
- De-Hui Yuan
- Crop Information Center, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Jian-Feng Xing
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants (Ministry of Education), Hainan Key Laboratory for Biology of Tropical Ornamental Plant Germplasm, College of Forestry, Hainan University, Haikou, China
| | - Mei-Wei Luan
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants (Ministry of Education), Hainan Key Laboratory for Biology of Tropical Ornamental Plant Germplasm, College of Forestry, Hainan University, Haikou, China
| | - Kai-Kai Ji
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants (Ministry of Education), Hainan Key Laboratory for Biology of Tropical Ornamental Plant Germplasm, College of Forestry, Hainan University, Haikou, China
| | - Jun Guo
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants (Ministry of Education), Hainan Key Laboratory for Biology of Tropical Ornamental Plant Germplasm, College of Forestry, Hainan University, Haikou, China
| | - Shang-Qian Xie
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants (Ministry of Education), Hainan Key Laboratory for Biology of Tropical Ornamental Plant Germplasm, College of Forestry, Hainan University, Haikou, China
| | - Yuan-Ming Zhang
- Crop Information Center, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
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Qi X, Zheng Y, Tang N, Zhou J, Sun S. Bioconversion of citrus peel wastes into bioflocculants and their application in the removal of microcystins. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 715:136885. [PMID: 32041043 DOI: 10.1016/j.scitotenv.2020.136885] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2019] [Revised: 01/21/2020] [Accepted: 01/21/2020] [Indexed: 06/10/2023]
Abstract
In this study, the mechanism for converting citrus peel wastes (CPW) into bioflocculants using Alcaligenes faecalis subsp. phenolicus ZY-16 was analysed. The results demonstrated that the ZY-16 strain could produce various lignocellulolytic enzymes, containing cellulase, hemicellulase, pectinase, protease, and ligninase, enhancing the hydrolysis of citrus peel wastes. Molecular distillation removes antimicrobial limonene, which could inhibit bioflocculant production. The optimal fermentation conditions with the highest bioflocculant yield (3.49 g/L) were 38.79 g/L of CPW, 35.54 °C, and pH 4.48. Furthermore, the bioflocculant was used to eliminate microcystins for the first time, and the highest removal efficiency (90.05%) was achieved at a pH of 3.0, after 800 mg/L of bioflocculant was added into the microcystins solution (10 mg/L) for 60 min. Therefore, this paper demonstrated that CPW could be a cost-effective feedstock for the production of bioflocculants, which have potential application in microcystin removal.
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Affiliation(s)
- Xiaoli Qi
- College of Life Sciences, Jiamusi University, Jiamusi 154007, China; School of Environmental Engineering, Wuhan Textile University, Wuhan 430073, China
| | - Yongliang Zheng
- Hubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization, Huanggang Normal University, Huanggang 438000, China
| | - Ningjia Tang
- School of Environmental Engineering, Wuhan Textile University, Wuhan 430073, China
| | - Jiangang Zhou
- School of Environmental Engineering, Wuhan Textile University, Wuhan 430073, China; Engineering Research Centre for Clean Production of Textile Dyeing and Printing, Ministry of Education, Wuhan Textile University, Wuhan 430073, China.
| | - Su Sun
- School of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei, China
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