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de Oliveira MMT, Ko AN, Obersteiner S, Falik O, Rachmilevitch S. Family ties: Root-root communication within Solanaceae. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 347:112203. [PMID: 39069008 DOI: 10.1016/j.plantsci.2024.112203] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 07/05/2024] [Accepted: 07/23/2024] [Indexed: 07/30/2024]
Abstract
Root-root communication effects on several physiological and metabolic aspects among Solanaceae relatives were studied. We examined cherry (C) and field (F) tomato (Solanum lycopersicum) and bell pepper (B) (Capsicum annuum), comprising three degrees of relatedness (DOR): high (H-DOR; CC, FF and BB), medium (M-DOR; CF) and low (L-DOR; CB and FB). Plants were grown in pairs of similar or different plants on a paper-based and non-destructive root growth system, namely, rhizoslides. Root growth, including the proliferation of fine roots, and respiration increased as the DOR decreased and were highest in paired L-DOR plants, as was shown for root respiration that increased by 63, 110 and 88 % for C, F, and B when grown with B, B and F, respectively. On the other hand, root exudates of L-DOR plants had significantly lower levels of total organic carbon and protein than those of H-DOR plants, indicating different root-root communication between individuals with different DOR. Our findings indicate, for the first time, that carbon allocation to root growth, exudation and respiration depends on the degree of genetic relatedness, and that the degree of relatedness between individual plants plays a key role in the root-root communication within Solanaceae.
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Affiliation(s)
- Milena Maria Tomaz de Oliveira
- The French Associates Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Israel; Utah State University, USA.
| | - Aye Nyein Ko
- The French Associates Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Israel
| | - Sophie Obersteiner
- The French Associates Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Israel
| | - Omer Falik
- Achva Academic College, Arugot 7980400, Israel; Mitrani Department of Desert Ecology, Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Midreshet Ben-Gurion, 8499000, Israel
| | - Shimon Rachmilevitch
- The French Associates Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Israel.
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2
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Eroğlu ÇG, Bennett AA, Steininger-Mairinger T, Hann S, Puschenreiter M, Wirth J, Gfeller A. Neighbour-induced changes in root exudation patterns of buckwheat results in altered root architecture of redroot pigweed. Sci Rep 2024; 14:8679. [PMID: 38622223 PMCID: PMC11018816 DOI: 10.1038/s41598-024-58687-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 04/02/2024] [Indexed: 04/17/2024] Open
Abstract
Roots are crucial in plant adaptation through the exudation of various compounds which are influenced and modified by environmental factors. Buckwheat root exudate and root system response to neighbouring plants (buckwheat or redroot pigweed) and how these exudates affect redroot pigweed was investigated. Characterising root exudates in plant-plant interactions presents challenges, therefore a split-root system which enabled the application of differential treatments to parts of a single root system and non-destructive sampling was developed. Non-targeted metabolome profiling revealed that neighbour presence and identity induces systemic changes. Buckwheat and redroot pigweed neighbour presence upregulated 64 and 46 metabolites, respectively, with an overlap of only 7 metabolites. Root morphology analysis showed that, while the presence of redroot pigweed decreased the number of root tips in buckwheat, buckwheat decreased total root length and volume, surface area, number of root tips, and forks of redroot pigweed. Treatment with exudates (from the roots of buckwheat and redroot pigweed closely interacting) on redroot pigweed decreased the total root length and number of forks of redroot pigweed seedlings when compared to controls. These findings provide understanding of how plants modify their root exudate composition in the presence of neighbours and how this impacts each other's root systems.
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Affiliation(s)
- Çağla Görkem Eroğlu
- Herbology in Field Crops, Plant Production Systems, Agroscope, Nyon, Switzerland
| | - Alexandra A Bennett
- Department of Chemistry, Institute of Analytical Chemistry, University of Natural Resources and Life Sciences, Vienna (BOKU), 1190, Vienna, Austria
| | - Teresa Steininger-Mairinger
- Department of Chemistry, Institute of Analytical Chemistry, University of Natural Resources and Life Sciences, Vienna (BOKU), 1190, Vienna, Austria
| | - Stephan Hann
- Department of Chemistry, Institute of Analytical Chemistry, University of Natural Resources and Life Sciences, Vienna (BOKU), 1190, Vienna, Austria
| | - Markus Puschenreiter
- Department of Forest and Soil Sciences, Institute of Soil Research, Rhizosphere Ecology & Biogeochemistry Group, University of Natural Resources and Life Sciences, Vienna, Konrad-Lorenz-Strasse 24, 3430, Tulln, Austria
| | - Judith Wirth
- Herbology in Field Crops, Plant Production Systems, Agroscope, Nyon, Switzerland
| | - Aurélie Gfeller
- Herbology in Field Crops, Plant Production Systems, Agroscope, Nyon, Switzerland.
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3
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Määttä T, Malhotra A. The hidden roots of wetland methane emissions. GLOBAL CHANGE BIOLOGY 2024; 30:e17127. [PMID: 38337165 DOI: 10.1111/gcb.17127] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 11/24/2023] [Accepted: 12/02/2023] [Indexed: 02/12/2024]
Abstract
Wetlands are the largest natural source of methane (CH4 ) globally. Climate and land use change are expected to alter CH4 emissions but current and future wetland CH4 budgets remain uncertain. One important predictor of wetland CH4 flux, plants, play an important role in providing substrates for CH4 -producing microbes, increasing CH4 consumption by oxygenating the rhizosphere, and transporting CH4 from soils to the atmosphere. Yet, there remain various mechanistic knowledge gaps regarding the extent to which plant root systems and their traits influence wetland CH4 emissions. Here, we present a novel conceptual framework of the relationships between a range of root traits and CH4 processes in wetlands. Based on a literature review, we propose four main CH4 -relevant categories of root function: gas transport, carbon substrate provision, physicochemical influences and root system architecture. Within these categories, we discuss how individual root traits influence CH4 production, consumption, and transport (PCT). Our findings reveal knowledge gaps concerning trait functions in physicochemical influences, and the role of mycorrhizae and temporal root dynamics in PCT. We also identify priority research needs such as integrating trait measurements from different root function categories, measuring root-CH4 linkages along environmental gradients, and following standardized root ecology protocols and vocabularies. Thus, our conceptual framework identifies relevant belowground plant traits that will help improve wetland CH4 predictions and reduce uncertainties in current and future wetland CH4 budgets.
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Affiliation(s)
- Tiia Määttä
- Department of Geography, University of Zürich, Zürich, Switzerland
| | - Avni Malhotra
- Department of Geography, University of Zürich, Zürich, Switzerland
- Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA
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4
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Hall RM, Markovic D, Kaul HP, Wagentristl H, Urban B, Durec N, Renner-Martin K, Ninkovic V. Talking Different Languages: The Role of Plant-Plant Communication When an Invader Beats up a Strange Neighborhood. PLANTS (BASEL, SWITZERLAND) 2023; 12:3298. [PMID: 37765461 PMCID: PMC10534427 DOI: 10.3390/plants12183298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 09/14/2023] [Accepted: 09/15/2023] [Indexed: 09/29/2023]
Abstract
Communication through airborne volatile organic compounds (VOCs) and root exudates plays a vital role in the multifarious interactions of plants. Common ragweed (Ambrosia artemesiifolia L.) is one of the most troublesome invasive alien species in agriculture. Below- and aboveground chemical interactions of ragweed with crops might be an important factor in the invasive species' success in agriculture. In laboratory experiments, we investigated the contribution of intra- and interspecific airborne VOCs and root exudates of ragweed to its competitiveness. Wheat, soybean, and maize were exposed to VOCs emitted from ragweed and vice versa, and the adaptation response was measured through plant morphological and physiological traits. We observed significant changes in plant traits of crops in response to ragweed VOCs, characterized by lower biomass production, lower specific leaf area, or higher chlorophyll contents. After exposure to ragweed VOCs, soybean and wheat produced significantly less aboveground dry mass, whereas maize did not. Ragweed remained unaffected when exposed to VOCs from the crops or a conspecific. All crops and ragweed significantly avoided root growth toward the root exudates of ragweed. The study shows that the plant response to either above- or belowground chemical cues is highly dependent on the identity of the neighbor, pointing out the complexity of plant-plant communication in plant communities.
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Affiliation(s)
- Rea Maria Hall
- Institute of Agronomy, University of Natural Resources and Life Science, 3430 Tulln an der Donau, Austria; (H.-P.K.); (B.U.); (N.D.); (K.R.-M.)
- Institute of Botany, University of Natural Resources and Life Science, 1180 Vienna, Austria
| | - Dimitrije Markovic
- Department of Ecology, Swedish University of Agricultural Sciences, SE-75007 Uppsala, Sweden;
- Faculty of Agriculture, University of Banja Luka, 78000 Banja Luka, Bosnia and Herzegovina
| | - Hans-Peter Kaul
- Institute of Agronomy, University of Natural Resources and Life Science, 3430 Tulln an der Donau, Austria; (H.-P.K.); (B.U.); (N.D.); (K.R.-M.)
| | - Helmut Wagentristl
- Experimental Farm Groß-Enzerdorf, University of Natural Resources and Life Sciences, 2301 Groß-Enzersdorf, Austria;
| | - Bernhard Urban
- Institute of Agronomy, University of Natural Resources and Life Science, 3430 Tulln an der Donau, Austria; (H.-P.K.); (B.U.); (N.D.); (K.R.-M.)
- Institute of Botany, University of Natural Resources and Life Science, 1180 Vienna, Austria
| | - Nora Durec
- Institute of Agronomy, University of Natural Resources and Life Science, 3430 Tulln an der Donau, Austria; (H.-P.K.); (B.U.); (N.D.); (K.R.-M.)
| | - Katharina Renner-Martin
- Institute of Agronomy, University of Natural Resources and Life Science, 3430 Tulln an der Donau, Austria; (H.-P.K.); (B.U.); (N.D.); (K.R.-M.)
- Institute of Mathematics, University of Natural Resources and Life Science, 1180 Vienna, Austria
| | - Velemir Ninkovic
- Department of Ecology, Swedish University of Agricultural Sciences, SE-75007 Uppsala, Sweden;
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5
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Becker C, Berthomé R, Delavault P, Flutre T, Fréville H, Gibot-Leclerc S, Le Corre V, Morel JB, Moutier N, Muños S, Richard-Molard C, Westwood J, Courty PE, de Saint Germain A, Louarn G, Roux F. The ecologically relevant genetics of plant-plant interactions. TRENDS IN PLANT SCIENCE 2023; 28:31-42. [PMID: 36114125 DOI: 10.1016/j.tplants.2022.08.014] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2022] [Revised: 08/03/2022] [Accepted: 08/19/2022] [Indexed: 06/15/2023]
Abstract
Interactions among plants have been long recognized as a major force driving plant community dynamics and crop yield. Surprisingly, our knowledge of the ecological genetics associated with variation of plant-plant interactions remains limited. In this opinion article by scientists from complementary disciplines, the international PLANTCOM network identified four timely questions to foster a better understanding of the mechanisms mediating plant assemblages. We propose that by identifying the key relationships among phenotypic traits involved in plant-plant interactions and the underlying adaptive genetic and molecular pathways, while considering environmental fluctuations at diverse spatial and time scales, we can improve predictions of genotype-by-genotype-by-environment interactions and modeling of productive and stable plant assemblages in wild habitats and crop fields.
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Affiliation(s)
- Claude Becker
- Genetics, Faculty of Biology, Ludwig Maximilians-University, 82152 Martinsried, Germany
| | - Richard Berthomé
- LIPME, INRAE, CNRS, Université de Toulouse, Castanet-Tolosan, France
| | | | - Timothée Flutre
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, UMR GQE-Le Moulon, 91190 Gif-sur-Yvette, France
| | - Hélène Fréville
- AGAP, Université Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France
| | - Stéphanie Gibot-Leclerc
- Agroécologie, INRAE, Institut Agro, Université du Bourgogne, Université Bourgogne-Franche-Comté, F-21000 Dijon, France
| | - Valérie Le Corre
- Agroécologie, INRAE, Institut Agro, Université du Bourgogne, Université Bourgogne-Franche-Comté, F-21000 Dijon, France
| | - Jean-Benoit Morel
- PHIM Plant Health Institute, Université Montpellier, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France
| | - Nathalie Moutier
- Institute for Genetics, Environment and Plant Protection (IGEPP), INRAE, Institut Agro, Université Rennes 1, 35650 Le Rheu, France
| | - Stéphane Muños
- LIPME, INRAE, CNRS, Université de Toulouse, Castanet-Tolosan, France
| | - Céline Richard-Molard
- Université Paris-Saclay, INRAE, AgroParisTech, UMR EcoSys, 78850 Thiverval-Grignon, France
| | - James Westwood
- School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, VA, USA
| | - Pierre-Emmanuel Courty
- Agroécologie, INRAE, Institut Agro, Université du Bourgogne, Université Bourgogne-Franche-Comté, F-21000 Dijon, France
| | - Alexandre de Saint Germain
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), 78000 Versailles, France
| | | | - Fabrice Roux
- LIPME, INRAE, CNRS, Université de Toulouse, Castanet-Tolosan, France.
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6
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Fan Y, Zhang R, Zhang Y, Yue M. The effects of genetic distance, nutrient conditions, and recognition ways on outcomes of kin recognition in Glechoma longituba. FRONTIERS IN PLANT SCIENCE 2022; 13:950758. [PMID: 36061780 PMCID: PMC9428624 DOI: 10.3389/fpls.2022.950758] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Accepted: 08/01/2022] [Indexed: 06/15/2023]
Abstract
Kin recognition might help plants decrease competitive cost and improve inclusive fitness with close genes; thus it might interact with environmental factors to affect communities. Whether and how various factors, such as the genetic distance of neighbors, environmental stressors, or the way a plant recognizes its neighbors, might modify plant growth strategies remains unclear. To answer these questions, we conducted experiments in which ramets of a clonal plant, Glechoma longituba, were grown adjacent to different genetically related neighbors (clone kin / close kin / distant kin) in different nutrient conditions (high / medium / low), or with only root exudates from pre-treatment in culture solution. By comparing competitive traits, we found that: (1) kin recognition in G. longituba was enhanced with closer genetic distance; (2) the outcomes of kin recognition were influenced by the extent of nutrient shortage; (3) kin recognition helped to alleviate the nutrient shortage effect; (4) kin recognition via root exudates affected only below-ground growth. Our results provide new insights on the potential for manipulating the outcome of kin recognition by altering neighbor genetic distance, nutrient conditions and recognition ways. Moreover, kin recognition can help plants mitigate the effects of nutrient shortage, with potential implications in agricultural research.
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7
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Parise AG, Bertoli SC, Souza GM. Belowground interactions affect shoot growth in Eucalyptus urophylla under restrictive conditions. PLANT SIGNALING & BEHAVIOR 2021; 16:1927589. [PMID: 34057038 PMCID: PMC8280888 DOI: 10.1080/15592324.2021.1927589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 05/03/2021] [Accepted: 05/05/2021] [Indexed: 06/12/2023]
Abstract
Plant-plant interactions like competition or facilitation between seedlings can have profound implications on their establishment and posterior development. These interactions are variable and depend upon the presence of neighbouring plants and environmental factors. In this work, we studied the effects of the interaction by the roots of Eucalyptus urophylla seedlings from a population under various environmental stressful conditions: water deficit, nutrient deficit, low light, low temperature, and high temperature. To evaluate it, we measured some growth and morphological parameters. We demonstrated that shoot parameters such as the number of leaves, leaf area, and dry weight of the leaves were the most affected parameters due to the belowground plant-plant interaction under various environmental conditions. We did not find evidence for competition among the plants, especially under restrictive conditions. Therefore, the study corroborates the stress-gradient hypothesis, which states that plants' differences under stressful conditions lead to facilitative interactions. It has implications for plant ecology and forestry techniques.
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Affiliation(s)
- André Geremia Parise
- Laboratory of Plant Cognition and Electrophysiology (LACEV), Department of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil
| | - Suzana Chiari Bertoli
- Laboratory of Plant Cognition and Electrophysiology (LACEV), Department of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil
| | - Gustavo Maia Souza
- Laboratory of Plant Cognition and Electrophysiology (LACEV), Department of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil
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8
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Bilas RD, Bretman A, Bennett T. Friends, neighbours and enemies: an overview of the communal and social biology of plants. PLANT, CELL & ENVIRONMENT 2021; 44:997-1013. [PMID: 33270936 DOI: 10.1111/pce.13965] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Revised: 11/06/2020] [Accepted: 11/26/2020] [Indexed: 05/21/2023]
Abstract
Plants were traditionally seen as rather passive actors in their environment, interacting with each other only in so far as they competed for the same resources. In the last 30 years, this view has been spectacularly overturned, with a wealth of evidence showing that plants actively detect and respond to their neighbours. Moreover, there is evidence that these responses depend on the identity of the neighbour, and that plants may cooperate with their kin, displaying social behaviour as complex as that observed in animals. These plant-plant interactions play a vital role in shaping natural ecosystems, and are also very important in determining agricultural productivity. However, in terms of mechanistic understanding, we have only just begun to scratch the surface, and many aspects of plant-plant interactions remain poorly understood. In this review, we aim to provide an overview of the field of plant-plant interactions, covering the communal interactions of plants with their neighbours as well as the social behaviour of plants towards their kin, and the consequences of these interactions. We particularly focus on the mechanisms that underpin neighbour detection and response, highlighting both progress and gaps in our understanding of these fascinating but previously overlooked interactions.
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Affiliation(s)
- Roza D Bilas
- School of Biology, Faculty of Biological Sciences, University of Leeds, Leeds, UK
| | - Amanda Bretman
- School of Biology, Faculty of Biological Sciences, University of Leeds, Leeds, UK
| | - Tom Bennett
- School of Biology, Faculty of Biological Sciences, University of Leeds, Leeds, UK
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9
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Wang NQ, Kong CH, Wang P, Meiners SJ. Root exudate signals in plant-plant interactions. PLANT, CELL & ENVIRONMENT 2021; 44:1044-1058. [PMID: 32931018 DOI: 10.1111/pce.13892] [Citation(s) in RCA: 45] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2020] [Revised: 08/31/2020] [Accepted: 09/08/2020] [Indexed: 05/12/2023]
Abstract
Plant-to-plant signalling is a key mediator of interactions among plant species. Plants can perceive and respond to chemical cues emitted from their neighbours, altering survival and performance, impacting plant coexistence and community assembly. An increasing number of studies indicate root exudates as key players in plant-to-plant signalling. Root exudates mediate root detection and behaviour, kin recognition, flowering and production, driving inter- and intra-specific facilitation in cropping systems and mixed-species plantations. Altered interactions may be attributed to the signalling components within root exudates. Root ethylene, strigolactones, jasmonic acid, (-)-loliolide and allantoin are signalling chemicals that convey information on local conditions in plant-plant interactions. These root-secreted signalling chemicals appear ubiquitous in plants and trigger a series of belowground responses inter- and intra-specifically, involving molecular events in biosynthesis, secretion and action. The secretion of root signals, mainly mediated by ATP-binding cassette transporters, is critical. Root-secreted signalling chemicals and their molecular mechanisms are rapidly revealing a multitude of fascinating plant-plant interactions. However, many root signals, particularly species-specific signals and their underlying mechanisms, remain to be uncovered due to methodological limitations and root-soil interactions. A thorough understanding of root-secreted chemical signals and their mechanisms will offer many ecological implications and potential applications for sustainable agriculture.
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Affiliation(s)
- Nan-Qi Wang
- College of Resources and Environmental Sciences, China Agricultural University, Beijing, China
| | - Chui-Hua Kong
- College of Resources and Environmental Sciences, China Agricultural University, Beijing, China
| | - Peng Wang
- Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, China
| | - Scott J Meiners
- Department of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA
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10
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Ninkovic V, Markovic D, Rensing M. Plant volatiles as cues and signals in plant communication. PLANT, CELL & ENVIRONMENT 2021; 44:1030-1043. [PMID: 33047347 PMCID: PMC8048923 DOI: 10.1111/pce.13910] [Citation(s) in RCA: 86] [Impact Index Per Article: 28.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2020] [Revised: 10/05/2020] [Accepted: 10/05/2020] [Indexed: 05/05/2023]
Abstract
Volatile organic compounds are important mediators of mutualistic interactions between plants and their physical and biological surroundings. Volatiles rapidly indicate competition or potential threat before these can take place, and they regulate and coordinate adaptation responses in neighbouring plants, fine-tuning them to match the exact stress encountered. Ecological specificity and context-dependency of plant-plant communication mediated by volatiles represent important factors that determine plant performance in specific environments. In this review, we synthesise the recent progress made in understanding the role of plant volatiles as mediators of plant interactions at the individual and community levels, highlighting the complexity of the plant receiver response to diverse volatile cues and signals and addressing how specific responses shape plant growth and survival. Finally, we outline the knowledge gaps and provide directions for future research. The complex dialogue between the emitter and receiver based on either volatile cues or signals determines the outcome of information exchange, which shapes the communication pattern between individuals at the community level and determines their ecological implications at other trophic levels.
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Affiliation(s)
- Velemir Ninkovic
- Department of EcologySwedish University of Agricultural SciencesUppsalaSweden
| | - Dimitrije Markovic
- Department of Crop Production EcologySwedish University of Agricultural SciencesUppsalaSweden
- Faculty of Agriculture, University of Banja LukaBanja LukaBosnia and Herzegovina
| | - Merlin Rensing
- Department of EcologySwedish University of Agricultural SciencesUppsalaSweden
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11
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Hirte J, Walder F, Hess J, Büchi L, Colombi T, van der Heijden MG, Mayer J. Enhanced root carbon allocation through organic farming is restricted to topsoils. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 755:143551. [PMID: 33190899 DOI: 10.1016/j.scitotenv.2020.143551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Revised: 10/29/2020] [Accepted: 10/31/2020] [Indexed: 06/11/2023]
Abstract
Soils store significant amounts of carbon (C) and thus can play a critical role for mitigating climate change. Crop roots represent the main C source in agricultural soils and are particularly important for long-term C storage in agroecosystems. To evaluate the potential of different farming systems to contribute to soil C sequestration and thus climate change mitigation, it is of great importance to gain a better understanding of the factors influencing root C allocation and distribution. So far, it is still unclear how root C allocation varies among farming systems and whether the choice of management practices can help to enhance root C inputs. In this study, we compared root C allocation in three main arable farming systems, namely organic, no-till, and conventional farming. We assessed root biomass, vertical root distribution to 0.75 m soil depth, and root-shoot ratios in 24 winter wheat fields. We further evaluated the relative importance of the farming system compared to site conditions and quantified the contribution of individual management practices and pedoclimatic drivers. Farming system explained one third of the variation in topsoil root biomass and root-shoot ratios, both being strongly positively related to weed biomass and soil organic C content and negatively to mineral nitrogen fertilization intensity. Root C allocation was significantly higher in organic farming as illustrated by an increase in root biomass (+40%) and root-shoot ratios (+60%) compared to conventional farming. By contrast, the overall impact of no-till was low. The importance of pedoclimatic conditions increased substantially with soil depth and deep root biomass was largely controlled by precipitation and soil texture, while the impact of management was close to zero. Our findings highlight the potential of organic farming in promoting root C inputs to topsoils and thereby contributing to soil organic matter build-up and improved soil quality in agroecosystems.
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Affiliation(s)
- Juliane Hirte
- Agroscope, Agroecology and Environment, Reckenholzstrasse 191, CH-8046 Zurich, Switzerland.
| | - Florian Walder
- Agroscope, Agroecology and Environment, Reckenholzstrasse 191, CH-8046 Zurich, Switzerland.
| | - Julia Hess
- Agroscope, Agroecology and Environment, Reckenholzstrasse 191, CH-8046 Zurich, Switzerland
| | - Lucie Büchi
- Agroscope, Plant Production Systems, Route de Duillier 50, CH-1260 Nyon, Switzerland; University of Greenwich, Natural Resources Institute, Central Avenue, UK-ME4 4TB Chatham, United Kingdom of Great Britain and Northern Ireland
| | - Tino Colombi
- Agroscope, Agroecology and Environment, Reckenholzstrasse 191, CH-8046 Zurich, Switzerland; Swedish University of Agricultural Sciences, Department of Soil and Environment, Box 7014, SE-750 07 Uppsala, Sweden
| | - Marcel G van der Heijden
- Agroscope, Agroecology and Environment, Reckenholzstrasse 191, CH-8046 Zurich, Switzerland; University of Zürich, Department for Plant and Microbial Biology, CH-8057 Zurich, Switzerland; Utrecht University, Plant-Microbe Interactions, Department of Biology, NL-3508 TB Utrecht, the Netherlands
| | - Jochen Mayer
- Agroscope, Agroecology and Environment, Reckenholzstrasse 191, CH-8046 Zurich, Switzerland
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12
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Chen BJW, During HJ, Vermeulen PJ, Kroon H, Poorter H, Anten NPR. The analysis of plant root responses to nutrient concentration, soil volume and neighbour presence: Different statistical approaches reflect different underlying basic questions. Funct Ecol 2020. [DOI: 10.1111/1365-2435.13664] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Bin J. W. Chen
- College of Biology and the Environment Nanjing Forestry University Nanjing China
| | - Heinjo J. During
- Section of Ecology and Biodiversity Institute of Environmental Biology Utrecht University Utrecht The Netherlands
| | - Peter J. Vermeulen
- Centre for Crop Systems Analysis Wageningen University Wageningen The Netherlands
| | - Hans Kroon
- Department of Experimental Plant Ecology Institute for Water and Wetland Research Radboud University Nijmegen The Netherlands
| | - Hendrik Poorter
- IBG‐2 Plant Sciences Forschungszentrum Jülich GmbH Jülich Germany
- Department of Biological Sciences Macquarie University North Ryde NSW Australia
| | - Niels P. R. Anten
- Centre for Crop Systems Analysis Wageningen University Wageningen The Netherlands
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13
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Callaway RM, Li L. Decisions, decisions, decisions: plant roots detect and respond to complex environmental cues. THE NEW PHYTOLOGIST 2020; 226:11-12. [PMID: 31904866 DOI: 10.1111/nph.16372] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Affiliation(s)
- Ragan M Callaway
- Division of Biological Sciences and Institute on Ecosystems, University of Montana, Missoula, MT, 59812, USA
| | - Long Li
- College of Resources and Environmental Sciences, China Agricultural University, Beijing, 100193, China
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14
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Abstract
Although root traits play a critical role in mediating plant-plant interactions and resource acquisition from the soil environment, research examining whether and how belowground competition can influence the evolution of root traits remains largely unexplored. Here we examine the possibility that root traits may evolve as a target of selection from interspecific competition using Ipomoea purpurea and I. hederacea, two closely related morning glory species that commonly co-occur in the United States, as a model system. We show that belowground competitive interactions between the two species can alter the pattern of selection on root traits in each species. Specifically, competition with I. purpurea changes the pattern of selection on root angle in I. hederacea, and competitive interactions with I. hederacea change the pattern of selection on root size in I. purpurea. However, we did not uncover evidence that intraspecific competition altered the pattern of selection on any root traits within I. hederacea. Overall, our results suggest that belowground competition between closely related species can influence the phenotypic evolution of root traits in natural populations. Our findings provide a microevolutionary perspective of how competitive belowground interactions may impact plant fitness, potentially leading to patterns of plant community structure.
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16
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Abstract
Relatives often interact differently with each other than with nonrelatives, and whether kin cooperate or compete has important consequences for the evolution of mating systems, seed size, dispersal, and competition. Previous research found that the larger of the size dimorphic seeds produced by the annual plant Aegilops triuncialis suppressed germination of their smaller sibs by 25%-60%. Here, we found evidence for kin recognition and sibling rivalry later in life among Aegilops seedlings that places seed-seed interactions in a broader context. In experiments with size dimorphic seeds, seedlings reduced the growth of sibling seedlings by ∼40% but that of nonsibling seedlings by ∼25%. These sequential antagonistic interactions between seeds and then seedlings provide insight into conflict and cooperation among kin. Kin-based conflict among seeds may maintain dormancy for some seeds until the coast is clear of more competitive siblings. If so, biotically induced seed dormancy may be a unique form of cooperation, which increases the inclusive fitness of maternal plants and offspring by minimizing competition among kin.
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Bastien R, Porat A, Meroz Y. Towards a framework for collective behavior in growth-driven systems, based on plant-inspired allotropic pairwise interactions. BIOINSPIRATION & BIOMIMETICS 2019; 14:055004. [PMID: 31292284 DOI: 10.1088/1748-3190/ab30d3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
A variety of biological systems are not motile, but sessile in nature, relying on growth as the main driver of their movement. Groups of such growing organisms can form complex structures, such as the functional architecture of growing axons, or the adaptive structure of plant root systems. These processes are not yet understood, however the decentralized growth dynamics bear similarities to the collective behavior observed in groups of motile organisms, such as flocks of birds or schools of fish. Equivalent growth mechanisms make these systems amenable to a theoretical framework inspired by tropic responses of plants, where growth is considered implicitly as the driver of the observed bending towards a stimulus. We introduce two new concepts related to plant tropisms: point tropism, the response of a plant to a nearby point signal source, and allotropism, the growth-driven response of plant organs to neighboring plants. We first analytically and numerically investigate the 2D dynamics of single organs responding to point signals fixed in space. Building on this we study pairs of organs interacting via allotropism, i.e. each organ senses signals emitted at the tip of their neighbor and responds accordingly. In the case of local sensing we find a rich state-space. We describe the different states, as well as the sharp transitions between them. We also find that the form of the state-space depends on initial conditions. This work sets the stage towards a theoretical framework for the investigation and understanding of systems of interacting growth-driven individuals.
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Affiliation(s)
- Renaud Bastien
- Department of Collective Behaviour, Max Planck Institute for Ornithology and Department of Biology, University of Konstanz, 78464 Konstanz, Germany. These two authors contributed equally
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18
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Fukano Y, Guo W, Noshita K, Hashida S, Kamikawa S. Genotype-aggregated planting improves yield in Jerusalem artichoke ( Helianthus tuberosus) due to self/non-self-discrimination. Evol Appl 2019; 12:508-518. [PMID: 30828371 PMCID: PMC6383731 DOI: 10.1111/eva.12735] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2018] [Revised: 10/16/2018] [Accepted: 10/31/2018] [Indexed: 11/30/2022] Open
Abstract
Accumulating evidence indicates that plants are capable of self/non-self and kin/stranger discrimination. Plants increase biomass of and resource allocation to roots when they encounter roots of conspecific non-self-neighbors, but not when they encounter self roots. Root proliferation usually occurs at the expense of reproductive investment. Therefore, if clonal crops are capable of self/non-self-discrimination, spatially aggregated planting with seedlings of the same genotype may decrease root proliferation and produce a higher yield than planting without considering seedling genotype. To test this idea, we grew Helianthus tuberosus (Jerusalem artichoke) in pot and field conditions and examined self/non-self-discrimination and the effectiveness of genotype-aggregated planting. Plants grown in self pairs allocated less to root biomass than plants grown in non-self pairs in both pot and field conditions; in field conditions, the self pairs produced 40% more tubers by weight than the non-self pairs. When six sprouts from seed tuber of two different genotypes were grown together, with the two genotypes planted aggregately (AGG) or alternately (ALT), plants in the AGG group produced 14% more tubers than plants in the ALT group. These results suggest that spatial aggregation of genotypes increases tuber production in H. tuberosus. Because we found no evidence for trade-offs between root biomass and tuber production, suppression of root proliferation may not be the only mechanism behind the benefits of genotype aggregation. By applying the concept of self/non-self-discrimination, farmers can increase crop production without additional external inputs or expansion of agricultural land use.
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Affiliation(s)
- Yuya Fukano
- Graduate School of Agricultural and Life SciencesThe University of TokyoNishitokyoJapan
| | - Wei Guo
- Graduate School of Agricultural and Life SciencesThe University of TokyoNishitokyoJapan
| | - Koji Noshita
- Graduate School of Agricultural and Life SciencesThe University of TokyoNishitokyoJapan
- Japan Science and Technology Agency (JST) Precursory Research for Embryonic Science and Technology (PRESTO)SaitamaJapan
| | - Shoko Hashida
- Graduate School of Agricultural and Life SciencesThe University of TokyoNishitokyoJapan
| | - Shotaka Kamikawa
- Graduate School of Agricultural and Life SciencesThe University of TokyoNishitokyoJapan
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Canarini A, Kaiser C, Merchant A, Richter A, Wanek W. Root Exudation of Primary Metabolites: Mechanisms and Their Roles in Plant Responses to Environmental Stimuli. FRONTIERS IN PLANT SCIENCE 2019; 10:157. [PMID: 30881364 PMCID: PMC6407669 DOI: 10.3389/fpls.2019.00157] [Citation(s) in RCA: 294] [Impact Index Per Article: 58.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2018] [Accepted: 01/29/2019] [Indexed: 05/19/2023]
Abstract
Root exudation is an important process determining plant interactions with the soil environment. Many studies have linked this process to soil nutrient mobilization. Yet, it remains unresolved how exudation is controlled and how exactly and under what circumstances plants benefit from exudation. The majority of root exudates including primary metabolites (sugars, amino acids, and organic acids) are believed to be passively lost from the root and used by rhizosphere-dwelling microbes. In this review, we synthetize recent advances in ecology and plant biology to explain and propose mechanisms by which root exudation of primary metabolites is controlled, and what role their exudation plays in plant nutrient acquisition strategies. Specifically, we propose a novel conceptual framework for root exudates. This framework is built upon two main concepts: (1) root exudation of primary metabolites is driven by diffusion, with plants and microbes both modulating concentration gradients and therefore diffusion rates to soil depending on their nutritional status; (2) exuded metabolite concentrations can be sensed at the root tip and signals are translated to modify root architecture. The flux of primary metabolites through root exudation is mostly located at the root tip, where the lack of cell differentiation favors diffusion of metabolites to the soil. We show examples of how the root tip senses concentration changes of exuded metabolites and translates that into signals to modify root growth. Plants can modify the concentration of metabolites either by controlling source/sink processes or by expressing and regulating efflux carriers, therefore challenging the idea of root exudation as a purely unregulated passive process. Through root exudate flux, plants can locally enhance concentrations of many common metabolites, which can serve as sensors and integrators of the plant nutritional status and of the nutrient availability in the surrounding environment. Plant-associated micro-organisms also constitute a strong sink for plant carbon, thereby increasing concentration gradients of metabolites and affecting root exudation. Understanding the mechanisms of and the effects that environmental stimuli have on the magnitude and type of root exudation will ultimately improve our knowledge of processes determining soil CO2 emissions, ecosystem functioning, and how to improve the sustainability of agricultural production.
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Affiliation(s)
- Alberto Canarini
- Terrestrial Ecosystem Research, Department of Microbiology and Ecosystem Science, Research Network ‘Chemistry Meets Microbiology’, University of Vienna, Vienna, Austria
- *Correspondence: Alberto Canarini,
| | - Christina Kaiser
- Terrestrial Ecosystem Research, Department of Microbiology and Ecosystem Science, Research Network ‘Chemistry Meets Microbiology’, University of Vienna, Vienna, Austria
| | - Andrew Merchant
- Faculty of Science, Sydney Institute of Agriculture, The University of Sydney, Sydney, NSW, Australia
| | - Andreas Richter
- Terrestrial Ecosystem Research, Department of Microbiology and Ecosystem Science, Research Network ‘Chemistry Meets Microbiology’, University of Vienna, Vienna, Austria
| | - Wolfgang Wanek
- Terrestrial Ecosystem Research, Department of Microbiology and Ecosystem Science, Research Network ‘Chemistry Meets Microbiology’, University of Vienna, Vienna, Austria
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20
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Ninkovic V, Rensing M, Dahlin I, Markovic D. Who is my neighbor? Volatile cues in plant interactions. PLANT SIGNALING & BEHAVIOR 2019; 14:1634993. [PMID: 31267830 PMCID: PMC6768235 DOI: 10.1080/15592324.2019.1634993] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2019] [Accepted: 06/18/2019] [Indexed: 05/19/2023]
Abstract
One of the most important challenges for individual plants is coexistence with their neighbors. To compensate for their sessile lifestyle, plants developed complex and sophisticated chemical systems of communication among each other. Site-specific biotic and abiotic factors constantly alter the physiological activity of plants, which causes them to release various secondary metabolites in their environments. Volatile organic compounds (VOCs) are the most common cues that reflect a plant's current physiological status. In this sense, the identity of its immediate neighbors may have the greatest impact for a plant, as they share the same available resources. Plants constantly monitor and respond to these cues with great sensitivity and discrimination, resulting in specific changes in their growth pattern and adjusting their physiology, morphology, and phenotype accordingly. Those typical competition responses in receivers may increase their fitness as they can be elicited even before the competition takes place. Plant-plant interactions are dynamic and complex as they can include many different and important surrounding cues. A major challenge for all individual plants is detecting and actively responding only to "true" cues that point to real upcoming threat. Such selective responses to highly specific cues embedded in volatile bouquets are of great ecological importance in understanding plant-plant interactions. We have reviewed recent research on the role of VOCs in complex plant-plant interactions in plant-cross kingdom and highlighted their influence on organisms at higher trophic levels.
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Affiliation(s)
- Velemir Ninkovic
- Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
- CONTACT Velemir Ninkovic Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - Merlin Rensing
- Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - Iris Dahlin
- Department of Crop Production Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - Dimitrije Markovic
- Department of Crop Production Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
- Faculty of Agriculture, University of Banja Luka, Banja Luka, Bosnia and Herzegovina
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21
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Subrahmaniam HJ, Libourel C, Journet EP, Morel JB, Muños S, Niebel A, Raffaele S, Roux F. The genetics underlying natural variation of plant-plant interactions, a beloved but forgotten member of the family of biotic interactions. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2018; 93:747-770. [PMID: 29232012 DOI: 10.1111/tpj.13799] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2017] [Revised: 12/02/2017] [Accepted: 12/06/2017] [Indexed: 05/22/2023]
Abstract
Despite the importance of plant-plant interactions on crop yield and plant community dynamics, our understanding of the genetic and molecular bases underlying natural variation of plant-plant interactions is largely limited in comparison with other types of biotic interactions. By listing 63 quantitative trait loci (QTL) mapping and global gene expression studies based on plants directly challenged by other plants, we explored whether the genetic architecture and the function of the candidate genes underlying natural plant-plant interactions depend on the type of interactions between two plants (competition versus commensalism versus reciprocal helping versus asymmetry). The 16 transcriptomic studies are unevenly distributed between competitive interactions (n = 12) and asymmetric interactions (n = 4, all focusing on response to parasitic plants). By contrast, 17 and 30 QTL studies were identified for competitive interactions and asymmetric interactions (either weed suppressive ability or response to parasitic plants), respectively. Surprisingly, no studies have been carried out on the identification of genetic and molecular bases underlying natural variation in positive interactions. The candidate genes underlying natural plant-plant interactions can be classified into seven categories of plant function that have been identified in artificial environments simulating plant-plant interactions either frequently (photosynthesis, hormones), only recently (cell wall modification and degradation, defense pathways against pathogens) or rarely (ABC transporters, histone modification and meristem identity/life history traits). Finally, we introduce several avenues that need to be explored in the future to obtain a thorough understanding of the genetic and molecular bases underlying plant-plant interactions within the context of realistic community complexity.
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Affiliation(s)
| | - Cyril Libourel
- LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France
| | - Etienne-Pascal Journet
- LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France
- AGIR, Université de Toulouse, INRA, INPT, INP-EI PURPAN, Castanet-Tolosan, France
| | - Jean-Benoît Morel
- BGPI, INRA, CIRAD, SupAgro, Université de Montpellier, Montpellier, France
| | - Stéphane Muños
- LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France
| | - Andreas Niebel
- LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France
| | - Sylvain Raffaele
- LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France
| | - Fabrice Roux
- LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France
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Gfeller A, Glauser G, Etter C, Signarbieux C, Wirth J. Fagopyrum esculentum Alters Its Root Exudation after Amaranthus retroflexus Recognition and Suppresses Weed Growth. FRONTIERS IN PLANT SCIENCE 2018; 9:50. [PMID: 29445385 PMCID: PMC5797785 DOI: 10.3389/fpls.2018.00050] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2017] [Accepted: 01/10/2018] [Indexed: 05/08/2023]
Abstract
Weed control by crops through growth suppressive root exudates is a promising alternative to herbicides. Buckwheat (Fagopyrum esculentum) is known for its weed suppression and redroot pigweed (Amaranthus retroflexus) control is probably partly due to allelopathic root exudates. This work studies whether other weeds are also suppressed by buckwheat and if the presence of weeds is necessary to induce growth repression. Buckwheat and different weeds were co-cultivated in soil, separating roots by a mesh allowing to study effects due to diffusion. Buckwheat suppressed growth of pigweed, goosefoot and barnyard grass by 53, 42, and 77% respectively without physical root interactions, probably through allelopathic compounds. Root exudates were obtained from sand cultures of buckwheat (BK), pigweed (P), and a buckwheat/pigweed mixed culture (BK-P). BK-P root exudates inhibited pigweed root growth by 49%. Characterization of root exudates by UHPLC-HRMS and principal component analysis revealed that BK and BK-P had a different metabolic profile suggesting that buckwheat changes its root exudation in the presence of pigweed indicating heterospecific recognition. Among the 15 different markers, which were more abundant in BK-P, tryptophan was identified and four others were tentatively identified. Our findings might contribute to the selection of crops with weed suppressive effects.
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Affiliation(s)
- Aurélie Gfeller
- Herbology in Field Crops and Viticulture, Plant Production Systems, Agroscope, Nyon, Switzerland
| | - Gaétan Glauser
- Neuchâtel Platform of Analytical Chemistry, University of Neuchâtel, Neuchâtel, Switzerland
| | - Clément Etter
- Herbology in Field Crops and Viticulture, Plant Production Systems, Agroscope, Nyon, Switzerland
| | - Constant Signarbieux
- Laboratory of Ecological Systems ECOS, School of Architecture, Civil and Environmental Engineering ENAC, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Judith Wirth
- Herbology in Field Crops and Viticulture, Plant Production Systems, Agroscope, Nyon, Switzerland
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Fuller AW, Young P, Pierce BD, Kitson-Finuff J, Jain P, Schneider K, Lazar S, Taran O, Palmer AG, Lynn DG. Redox-mediated quorum sensing in plants. PLoS One 2017; 12:e0182655. [PMID: 28902851 PMCID: PMC5597120 DOI: 10.1371/journal.pone.0182655] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2016] [Accepted: 07/22/2017] [Indexed: 11/19/2022] Open
Abstract
The rhizosphere, the narrow zone of soil around plant roots, is a complex network of interactions between plants, bacteria, and a variety of other organisms. The absolute dependence on host-derived signals, or xenognosins, to regulate critical developmental checkpoints for host commitment in the obligate parasitic plants provides a window into the rhizosphere's chemical dynamics. These sessile intruders use H2O2 in a process known as semagenesis to chemically modify the mature root surfaces of proximal host plants and generate p-benzoquinones (BQs). The resulting redox-active signaling network regulates the spatial and temporal commitments necessary for host attachment. Recent evidence from non-parasites, including Arabidopsis thaliana, establishes that reactive oxygen species (ROS) production regulates similar redox circuits related to root recognition, broadening xenognosins' role beyond the parasites. Here we compare responses to the xenognosin dimethoxybenzoquinone (DMBQ) between the parasitic plant Striga asiatica and the non-parasitic A. thaliana. Exposure to DMBQ simulates the proximity of a mature root surface, stimulating an increase in cytoplasmic Ca2+ concentration in both plants, but leads to remarkably different phenotypic responses in the parasite and non-parasite. In S. asiatica, DMBQ induces development of the host attachment organ, the haustorium, and decreases ROS production at the root tip, while in A. thaliana, ROS production increases and further growth of the root tip is arrested. Obstruction of Ca2+ channels and the addition of antioxidants both lead to a decrease in the DMBQ response in both parasitic and non-parasitic plants. These results are consistent with Ca2+ regulating the activity of NADPH oxidases, which in turn sustain the autocatalytic production of ROS via an external quinone/hydroquinone redox cycle. Mechanistically, this chemistry is similar to black and white photography with the emerging dynamic reaction-diffusion network laying the foundation for the precise temporal and spatial control underlying rhizosphere architecture.
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Affiliation(s)
- Alexandra W. Fuller
- Departments of Biology and Chemistry, Emory University, Atlanta, GA, United States of America
| | - Phoebe Young
- Departments of Biology and Chemistry, Emory University, Atlanta, GA, United States of America
| | - B. Daniel Pierce
- Departments of Biology and Chemistry, Emory University, Atlanta, GA, United States of America
- Gottwald Science Center, University of Richmond, Richmond, VA, United States of America
| | - Jamie Kitson-Finuff
- Department of Biological Sciences, Florida Institute of Technology, Melbourne, FL, United States of America
| | - Purvi Jain
- Department of Biological Sciences, Florida Institute of Technology, Melbourne, FL, United States of America
| | - Karl Schneider
- Department of Biological Sciences, Florida Institute of Technology, Melbourne, FL, United States of America
| | - Stephen Lazar
- Department of Biological Sciences, Florida Institute of Technology, Melbourne, FL, United States of America
| | - Olga Taran
- Departments of Biology and Chemistry, Emory University, Atlanta, GA, United States of America
| | - Andrew G. Palmer
- Department of Biological Sciences, Florida Institute of Technology, Melbourne, FL, United States of America
| | - David G. Lynn
- Departments of Biology and Chemistry, Emory University, Atlanta, GA, United States of America
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25
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Skrzypczak T, Krela R, Kwiatkowski W, Wadurkar S, Smoczyńska A, Wojtaszek P. Plant Science View on Biohybrid Development. Front Bioeng Biotechnol 2017; 5:46. [PMID: 28856135 PMCID: PMC5558049 DOI: 10.3389/fbioe.2017.00046] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2017] [Accepted: 07/24/2017] [Indexed: 01/07/2023] Open
Abstract
Biohybrid consists of a living organism or cell and at least one engineered component. Designing robot-plant biohybrids is a great challenge: it requires interdisciplinary reconsideration of capabilities intimate specific to the biology of plants. Envisioned advances should improve agricultural/horticultural/social practice and could open new directions in utilization of plants by humans. Proper biohybrid cooperation depends upon effective communication. During evolution, plants developed many ways to communicate with each other, with animals, and with microorganisms. The most notable examples are: the use of phytohormones, rapid long-distance signaling, gravity, and light perception. These processes can now be intentionally re-shaped to establish plant-robot communication. In this article, we focus on plants physiological and molecular processes that could be used in bio-hybrids. We show phototropism and biomechanics as promising ways of effective communication, resulting in an alteration in plant architecture, and discuss the specifics of plants anatomy, physiology and development with regards to the bio-hybrids. Moreover, we discuss ways how robots could influence plants growth and development and present aims, ideas, and realized projects of plant-robot biohybrids.
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Affiliation(s)
- Tomasz Skrzypczak
- Faculty of Biology, Department of Molecular and Cellular Biology, Adam Mickiewicz University in Poznań, Poznań, Poland
| | - Rafał Krela
- Faculty of Biology, Department of Molecular and Cellular Biology, Adam Mickiewicz University in Poznań, Poznań, Poland
| | - Wojciech Kwiatkowski
- Faculty of Biology, Department of Molecular and Cellular Biology, Adam Mickiewicz University in Poznań, Poznań, Poland
| | - Shraddha Wadurkar
- Faculty of Biology, Department of Molecular and Cellular Biology, Adam Mickiewicz University in Poznań, Poznań, Poland
| | - Aleksandra Smoczyńska
- Faculty of Biology, Department of Gene Expression, Adam Mickiewicz University in Poznań, Poznań, Poland
| | - Przemysław Wojtaszek
- Faculty of Biology, Department of Molecular and Cellular Biology, Adam Mickiewicz University in Poznań, Poznań, Poland
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26
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Dong T, Li J, Liao Y, Chen BJW, Xu X. Root-mediated sex recognition in a dioecious tree. Sci Rep 2017; 7:801. [PMID: 28400562 PMCID: PMC5429744 DOI: 10.1038/s41598-017-00894-2] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Accepted: 03/16/2017] [Indexed: 01/14/2023] Open
Abstract
Recent studies have demonstrated that plants can determine the identity of neighbouring roots (e.g., self and non-self, kin and non-kin), but whether they can discriminate by sex remains an open question. Here, we predict that dioecious plants can modulate their root performance in response to local root conditions related to sex. Female and male Populus cathayana cuttings were planted in a greenhouse in root-owner (one individual without a root neighbour) or root-sharer pairs (two individuals with roots neighbouring each other) with equal amounts of nutrients and space per plant in three combinations (females-females, males-males or females-males); root morphology, biomass and allocation were investigated. P. cathayana root-sharers altered their root growth in same-sex but not in different-sex combinations. Females enhanced root growth and allocation but decreased root proliferation (greater diameter with reduced branching and specific root length) in the presence of a female root neighbour, while males reduced root growth but increased root morphological proliferation in contact with another male. Therefore, the effect of a neighbour of the same sex differed from that of a neighbour of the opposite sex, which suggests that these plants can recognize the sexual identity of their neighbours.
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Affiliation(s)
- Tingfa Dong
- Key Laboratory of Southwest China Wildlife Resources Conservation, Ministry of Education, and College of Life Sciences, China West Normal University, Nanchong, Sichuan, 637009, China
| | - Junyu Li
- Key Laboratory of Southwest China Wildlife Resources Conservation, Ministry of Education, and College of Life Sciences, China West Normal University, Nanchong, Sichuan, 637009, China
- School of Urban-rural Planning and Landscape Architecture, Xuchang University, Xuchang, 461000, China
| | - Yongmei Liao
- Key Laboratory of Southwest China Wildlife Resources Conservation, Ministry of Education, and College of Life Sciences, China West Normal University, Nanchong, Sichuan, 637009, China
| | - Bin J W Chen
- College of Biology and the Environment, Nanjing Forestry University, Nanjing, 210037, China
| | - Xiao Xu
- Key Laboratory of Southwest China Wildlife Resources Conservation, Ministry of Education, and College of Life Sciences, China West Normal University, Nanchong, Sichuan, 637009, China.
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Kuebbing SE, Patterson CM, Classen AT, Simberloff D. Co-occurring nonnative woody shrubs have additive and non-additive soil legacies. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2016; 26:1896-1906. [PMID: 27755688 DOI: 10.1890/15-1931.1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2015] [Revised: 02/03/2016] [Accepted: 02/10/2016] [Indexed: 06/06/2023]
Abstract
To maximize limited conservation funds and prioritize management projects that are likely to succeed, accurate assessment of invasive nonnative species impacts is essential. A common challenge to prioritization is a limited knowledge of the difference between the impacts of a single nonnative species compared to the impacts of nonnative species when they co-occur, and in particular predicting when impacts of co-occurring nonnative species will be non-additive. Understanding non-additivity is important for management decisions because the management of only one co-occurring invader will not necessarily lead to a predictable reduction in the impact or growth of the other nonnative plant. Nonnative plants are frequently associated with changes in soil biotic and abiotic characteristics, which lead to plant-soil interactions that influence the performance of other species grown in those soils. Whether co-occurring nonnative plants alter soil properties additively or non-additively relative to their effects on soils when they grow in monoculture is rarely addressed. We use a greenhouse plant-soil feedback experiment to test for non-additive soil impacts of two common invasive nonnative woody shrubs, Lonicera maackii and Ligustrum sinense, in deciduous forests of the southeastern United States. We measured the performance of each nonnative shrub, a native herbaceous community, and a nonnative woody vine in soils conditioned by each shrub singly or together in polyculture. Soils conditioned by both nonnative shrubs had non-additive impacts on native and nonnative performance. Root mass of the native herbaceous community was 1.5 times lower and the root mass of the nonnative L. sinense was 1.8 times higher in soils conditioned by both L. maackii and L. sinense than expected based upon growth in soils conditioned by either shrub singly. This result indicates that when these two nonnative shrubs co-occur, their influence on soils disproportionally favors persistence of the nonnative L. sinense relative to this native herbaceous community, and could provide an explanation of why native species abundance is frequently depressed in these communities. Additionally, the difference between native and nonnative performance demonstrates that invasive impact studies focusing on the impact only of single species can be insufficient for determining the impact of co-occurring invasive plant species.
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Affiliation(s)
- Sara E Kuebbing
- Department of Ecology & Evolutionary Biology, University of Tennessee, Knoxville, Tennessee, 37996, USA.
- School of Forestry & Environmental Studies, Yale University, New Haven, Connecticut, 06511, USA.
| | - Courtney M Patterson
- Department of Ecology & Evolutionary Biology, University of Tennessee, Knoxville, Tennessee, 37996, USA
| | - Aimée T Classen
- Department of Ecology & Evolutionary Biology, University of Tennessee, Knoxville, Tennessee, 37996, USA
- The Natural History Museum of Denmark, University of Copenhagen, Universitetsparken 15, 2100, København Ø, Copenhagen, Denmark
| | - Daniel Simberloff
- Department of Ecology & Evolutionary Biology, University of Tennessee, Knoxville, Tennessee, 37996, USA
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Workman RE, Cruzan MB. Common mycelial networks impact competition in an invasive grass. AMERICAN JOURNAL OF BOTANY 2016; 103:1041-1049. [PMID: 27283022 DOI: 10.3732/ajb.1600142] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2016] [Accepted: 05/12/2016] [Indexed: 06/06/2023]
Abstract
PREMISE OF THE STUDY Mycorrhizal hyphal complexes can connect multiple host plants to form common mycelial networks (CMNs) that may affect plant competitive outcomes and community composition through differential resource allocation. The impacts of CMN interactions on invasive plants are not well understood and could be crucial to the understanding of invasive plant establishment and success. METHODS We grew the invasive grass Brachypodium sylvaticum in intra- and interspecific pairings with native grass Bromus vulgaris in a greenhouse and controlled for the effects of CMN and root interactions by manipulating the belowground separation between competitors. Comparison of plant growth in pots that allowed CMN interactions and excluded root competition and vice versa, or both, allowed us to delineate the effects of network formation and root competition on invasive plant establishment and performance. KEY RESULTS Brachypodium sylvaticum grown in pots allowing for only hyphal interactions, but no root competition, displayed superior growth compared with conspecifics in other treatments. Invasive performance was poorest when pairs were not separated by a barrier. Shoot nitrogen content in B. sylvaticum was higher in mycorrhizal plants only when connections were allowed between competitors. CONCLUSIONS Our results indicate that the presence of CMN networks can have positive effects on B. sylvaticum establishment and nutrient status, which may affect plant competition and invasion success.
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Affiliation(s)
- Rachael E Workman
- Department of Biology, Portland State University, 1719 SW 10th Avenue, Portland, Oregon 97201 USA
| | - Mitchell B Cruzan
- Department of Biology, Portland State University, 1719 SW 10th Avenue, Portland, Oregon 97201 USA
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Lankinen Å, Niss J, Madjidian JA. Effect of root contact on pollen competitive ability in a hermaphroditic winter-annual herb. Evol Ecol 2016. [DOI: 10.1007/s10682-016-9839-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Cvrčková F, Žárský V, Markoš A. Plant Studies May Lead Us to Rethink the Concept of Behavior. Front Psychol 2016; 7:622. [PMID: 27242570 PMCID: PMC4874364 DOI: 10.3389/fpsyg.2016.00622] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2016] [Accepted: 04/13/2016] [Indexed: 01/05/2023] Open
Affiliation(s)
- Fatima Cvrčková
- Department of Experimental Plant Biology, Faculty of Science, Charles University in Prague Prague, Czech Republic
| | - Viktor Žárský
- Department of Experimental Plant Biology, Faculty of Science, Charles University in Prague Prague, Czech Republic
| | - Anton Markoš
- Department of Philosophy and History of Science, Faculty of Science, Charles University in Prague Prague, Czech Republic
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Calling in the Dark: The Role of Volatiles for Communication in the Rhizosphere. SIGNALING AND COMMUNICATION IN PLANTS 2016. [DOI: 10.1007/978-3-319-33498-1_8] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Barlow PW. The natural history of consciousness, and the question of whether plants are conscious, in relation to the Hameroff-Penrose quantum-physical 'Orch OR' theory of universal consciousness. Commun Integr Biol 2015; 8:e1041696. [PMID: 26478778 PMCID: PMC4594572 DOI: 10.1080/19420889.2015.1041696] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2015] [Revised: 03/28/2015] [Accepted: 04/13/2015] [Indexed: 12/23/2022] Open
Affiliation(s)
- Peter W Barlow
- School of Biological Sciences; University of Bristol; Bristol Life Sciences Building; Bristol, UK
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Chen BJW, During HJ, Vermeulen PJ, Kroon H, Poorter H, Anten NPR. Corrections for rooting volume and plant size reveal negative effects of neighbour presence on root allocation in pea. Funct Ecol 2015. [DOI: 10.1111/1365-2435.12450] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Bin J. W. Chen
- Ecology & Biodiversity Institute of Environmental Biology Utrecht University P.O. Box 80084 3508 TB Utrecht The Netherlands
- Centre for Crop Systems Analysis Wageningen University P.O. Box 430 6700 AK Wageningen The Netherlands
| | - Heinjo J. During
- Ecology & Biodiversity Institute of Environmental Biology Utrecht University P.O. Box 80084 3508 TB Utrecht The Netherlands
| | - Peter J. Vermeulen
- Centre for Crop Systems Analysis Wageningen University P.O. Box 430 6700 AK Wageningen The Netherlands
| | - Hans Kroon
- Experimental Plant Ecology Institute for Water and Wetland Research Radboud University Nijmegen P.O. Box 9010 6500 GL Nijmegen The Netherlands
| | - Hendrik Poorter
- IBG‐2 Plant Sciences Forschungszentrum Jülich GmbH D‐52425 Jülich Germany
| | - Niels P. R. Anten
- Centre for Crop Systems Analysis Wageningen University P.O. Box 430 6700 AK Wageningen The Netherlands
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Chen BJW, Vermeulen PJ, During HJ, Anten NPR. Testing for disconnection and distance effects on physiological self-recognition within clonal fragments of Potentilla reptans. FRONTIERS IN PLANT SCIENCE 2015; 6:215. [PMID: 25904925 PMCID: PMC4387473 DOI: 10.3389/fpls.2015.00215] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2015] [Accepted: 03/17/2015] [Indexed: 05/23/2023]
Abstract
Evidence suggests that belowground self-recognition in clonal plants can be disrupted between sister ramets by the loss of connections or long distances within a genet. However, these results may be confounded by severing connections between ramets in the setups. Using Potentilla reptans, we examined severance effects in a setup that grew ramet pairs with connections either intact or severed. We showed that severance generally reduced new stolon mass but had no effect on root allocation of ramets. However, it did reduce root mass of younger ramets of the pairs. We also explored evidence for physiological self-recognition with another setup that avoided severing connections by manipulating root interactions between closely connected ramets, between remotely connected ramets and between disconnected ramets within one genet. We found that ramets grown with disconnected neighbors had less new stolon mass, similar root mass but higher root allocation as compared to ramets grown with connected neighbors. There was no difference in ramet growth between closely connected- and remotely connected-neighbor treatments. We suggest that severing connections affects ramet interactions by disrupting their physiological integration. Using the second setup, we provide unbiased evidence for physiological self-recognition, while also suggesting that it can persist over long distances.
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Affiliation(s)
- Bin J. W. Chen
- Ecology and Biodiversity, Institute of Environmental Biology, Utrecht UniversityUtrecht, Netherlands
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen UniversityWageningen, Netherlands
| | - Peter J. Vermeulen
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen UniversityWageningen, Netherlands
| | - Heinjo J. During
- Ecology and Biodiversity, Institute of Environmental Biology, Utrecht UniversityUtrecht, Netherlands
| | - Niels P. R. Anten
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen UniversityWageningen, Netherlands
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