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García-Vázquez FA. Artificial intelligence and porcine breeding. Anim Reprod Sci 2024:107538. [PMID: 38926001 DOI: 10.1016/j.anireprosci.2024.107538] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2024] [Revised: 06/13/2024] [Accepted: 06/14/2024] [Indexed: 06/28/2024]
Abstract
Livestock management is evolving into a new era, characterized by the analysis of vast quantities of data (Big Data) collected from both traditional breeding methods and new technologies such as sensors, automated monitoring system, and advanced analytics. Artificial intelligence (A-In), which refers to the capability of machines to mimic human intelligence, including subfields like machine learning and deep learning, is playing a pivotal role in this transformation. A wide array of A-In techniques, successfully employed in various industrial and scientific contexts, are now being integrated into mainstream livestock management practices. In the case of swine breeding, while traditional methods have yielded considerable success, the increasing amount of information requires the adoption of new technologies such as A-In to drive productivity, enhance animal welfare, and reduce environmental impact. Current findings suggest that these techniques have the potential to match or exceed the performance of traditional methods, often being more scalable in terms of efficiency and sustainability within the breeding industry. This review provides insights into the application of A-In in porcine breeding, from the perspectives of both sows (including welfare and reproductive management) and boars (including semen quality and health), and explores new approaches which are already being applied in other species.
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Affiliation(s)
- Francisco A García-Vázquez
- Departamento de Fisiología, Facultad de Veterinaria, Campus de Excelencia Mare Nostrum, Universidad de Murcia, Murcia 30100, Spain; Instituto Murciano de Investigación Biosanitaria (IMIB-Arrixaca), Murcia, Spain.
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2
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Kakar JK, Hussain S, Kim SC, Kim H. TimeTector: A Twin-Branch Approach for Unsupervised Anomaly Detection in Livestock Sensor Noisy Data (TT-TBAD). SENSORS (BASEL, SWITZERLAND) 2024; 24:2453. [PMID: 38676070 PMCID: PMC11055079 DOI: 10.3390/s24082453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Revised: 03/18/2024] [Accepted: 03/20/2024] [Indexed: 04/28/2024]
Abstract
Unsupervised anomaly detection in multivariate time series sensor data is a complex task with diverse applications in different domains such as livestock farming and agriculture (LF&A), the Internet of Things (IoT), and human activity recognition (HAR). Advanced machine learning techniques are necessary to detect multi-sensor time series data anomalies. The primary focus of this research is to develop state-of-the-art machine learning methods for detecting anomalies in multi-sensor data. Time series sensors frequently produce multi-sensor data with anomalies, which makes it difficult to establish standard patterns that can capture spatial and temporal correlations. Our innovative approach enables the accurate identification of normal, abnormal, and noisy patterns, thus minimizing the risk of misinterpreting models when dealing with mixed noisy data during training. This can potentially result in the model deriving incorrect conclusions. To address these challenges, we propose a novel approach called "TimeTector-Twin-Branch Shared LSTM Autoencoder" which incorporates several Multi-Head Attention mechanisms. Additionally, our system now incorporates the Twin-Branch method which facilitates the simultaneous execution of multiple tasks, such as data reconstruction and prediction error, allowing for efficient multi-task learning. We also compare our proposed model to several benchmark anomaly detection models using our dataset, and the results show less error (MSE, MAE, and RMSE) in reconstruction and higher accuracy scores (precision, recall, and F1) against the baseline models, demonstrating that our approach outperforms these existing models.
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Affiliation(s)
- Junaid Khan Kakar
- Department of Electronics and Information Engineering, Jeonbuk National University, Jeonju 54896, Republic of Korea;
- Core Research Institute of Intelligent Robots, Jeonbuk National University, Jeonju 54896, Republic of Korea;
| | - Shahid Hussain
- Innovation Value Institute (IVI), School of Business, National University of Ireland Maynooth (NUIM), W23 F2H6 Maynooth, Ireland;
| | - Sang Cheol Kim
- Core Research Institute of Intelligent Robots, Jeonbuk National University, Jeonju 54896, Republic of Korea;
| | - Hyongsuk Kim
- Core Research Institute of Intelligent Robots, Jeonbuk National University, Jeonju 54896, Republic of Korea;
- Department of Electronics Engineering, Jeonbuk National University, Jeonju 54896, Republic of Korea
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3
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Ibáñez C, Moreno-Manrique M, Villagrá A, Bueso-Ródenas J, Mínguez C. Evaluation of Non-Contact Device to Measure Body Temperature in Sheep. Animals (Basel) 2023; 14:98. [PMID: 38200829 PMCID: PMC10778359 DOI: 10.3390/ani14010098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2023] [Revised: 12/14/2023] [Accepted: 12/24/2023] [Indexed: 01/12/2024] Open
Abstract
Non-contact devices have been used in the measurement of body temperature in livestock production as a tool for testing disease in different species. However, there are few studies about the variation and correlations in body temperature between rectal temperature (RT) and non-contact devices such as non-contact infrared thermometers (NCIT) and thermal imaging/infrared thermography (IRT). The objective of this work was to evaluate the accuracy of non-contact devices to measure the body temperature in sheep, considering six body regions and the possibility of implementing these systems in herd management. The experiment was carried out at the experimental farm of the Catholic University of Valencia, located in the municipality of Massanassa in July of 2021, with 72 dry manchega ewes, and we compared the rectal temperature with two types of non-contact infrared devices for the assessment of body temperature in healthy sheep. Except for the temperature taken by NCIT at the muzzle, the correlation between RT vs. NCIT or IRT showed a low significance or was difficult to use for practical flock management purposes. In addition, the variability between devices was high, which implies that measurements should be interpreted with caution in warm climates and open pens, such as most sheep farms in the Spanish Mediterranean area. The use of infrared cameras devices to assess body temperature may have a promising future, but in order to be widely applied as a routine management method on farms, the system needs to become cheaper, simpler in terms of measurements and quicker in terms of analyzing results.
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Affiliation(s)
- Carla Ibáñez
- Department of Animal Production and Public Health, Faculty of Veterinary Medicine and Experimental Sciences, Catholic University of Valencia “San Vicente Mártir”, 46001 Valencia, Spain; (C.I.); (C.M.)
| | - María Moreno-Manrique
- Doctoral School, Catholic University of Valencia “San Vicente Mártir”, 46001 Valencia, Spain;
| | - Aránzazu Villagrá
- Centro de Investigación en Tecnología Animal (CITA), Valencian Institute for Agricultura Research (IVIA), 12400 Segorbe, Spain;
| | - Joel Bueso-Ródenas
- Department of Animal Production and Public Health, Faculty of Veterinary Medicine and Experimental Sciences, Catholic University of Valencia “San Vicente Mártir”, 46001 Valencia, Spain; (C.I.); (C.M.)
| | - Carlos Mínguez
- Department of Animal Production and Public Health, Faculty of Veterinary Medicine and Experimental Sciences, Catholic University of Valencia “San Vicente Mártir”, 46001 Valencia, Spain; (C.I.); (C.M.)
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van Erp-van der Kooij E, de Graaf LF, de Kruijff DA, Pellegrom D, de Rooij R, Welters NIT, van Poppel J. Using Sound Location to Monitor Farrowing in Sows. Animals (Basel) 2023; 13:3538. [PMID: 38003155 PMCID: PMC10668711 DOI: 10.3390/ani13223538] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2023] [Revised: 11/11/2023] [Accepted: 11/14/2023] [Indexed: 11/26/2023] Open
Abstract
Precision Livestock Farming systems can help pig farmers prevent health and welfare issues around farrowing. Five sows were monitored in two field studies. A Sorama L642V sound camera, visualising sound sources as coloured spots using a 64-microphone array, and a Bascom XD10-4 security camera with a built-in microphone were used in a farrowing unit. Firstly, sound spots were compared with audible sounds, using the Observer XT (Noldus Information Technology), analysing video data at normal speed. This gave many false positives, including visible sound spots without audible sounds. In total, 23 of 50 piglet births were visible, but none were audible. The sow's behaviour changed when farrowing started. One piglet was silently crushed. Secondly, data were analysed at a 10-fold slower speed when comparing sound spots with audible sounds and sow behaviour. This improved results, but accuracy and specificity were still low. When combining audible sound with visible sow behaviour and comparing sound spots with combined sound and behaviour, the accuracy was 91.2%, the error was 8.8%, the sensitivity was 99.6%, and the specificity was 69.7%. We conclude that sound cameras are promising tools, detecting sound more accurately than the human ear. There is potential to use sound cameras to detect the onset of farrowing, but more research is needed to detect piglet births or crushing.
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Affiliation(s)
- Elaine van Erp-van der Kooij
- Department of Animal Husbandry, HAS Green Academy, University of Applied Sciences, P.O. Box 90108, 5200 MA ‘s-Hertogenbosch, The Netherlands (J.v.P.)
| | - Lois F. de Graaf
- Department of Animal Husbandry, HAS Green Academy, University of Applied Sciences, P.O. Box 90108, 5200 MA ‘s-Hertogenbosch, The Netherlands (J.v.P.)
| | - Dennis A. de Kruijff
- Department of Animal Husbandry, HAS Green Academy, University of Applied Sciences, P.O. Box 90108, 5200 MA ‘s-Hertogenbosch, The Netherlands (J.v.P.)
| | - Daphne Pellegrom
- Department of Animal Husbandry, HAS Green Academy, University of Applied Sciences, P.O. Box 90108, 5200 MA ‘s-Hertogenbosch, The Netherlands (J.v.P.)
| | - Renilda de Rooij
- Department of Animal Husbandry, HAS Green Academy, University of Applied Sciences, P.O. Box 90108, 5200 MA ‘s-Hertogenbosch, The Netherlands (J.v.P.)
| | - Nian I. T. Welters
- Department of Applied Biology, HAS Green Academy, University of Applied Sciences, P.O. Box 90108, 5200 MA ‘s-Hertogenbosch, The Netherlands
| | - Jeroen van Poppel
- Department of Animal Husbandry, HAS Green Academy, University of Applied Sciences, P.O. Box 90108, 5200 MA ‘s-Hertogenbosch, The Netherlands (J.v.P.)
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Dambaulova GK, Madin VA, Utebayeva ZA, Baimyrzaeva MK, Shora LZ. Benefits of automated pig feeding system: A simplified cost-benefit analysis in the context of Kazakhstan. Vet World 2023; 16:2205-2209. [PMID: 38152264 PMCID: PMC10750755 DOI: 10.14202/vetworld.2023.2205-2209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2023] [Accepted: 10/11/2023] [Indexed: 12/29/2023] Open
Abstract
Background and Aim Automated pig feeding system is an emerging technology with the potential to considerably enhance pig farming. This study aimed to explore the benefits of automated pig feeding systems and provide a simplified cost-benefit analysis, which would serve as a valuable decision-making tool for the stakeholders. Materials and Methods This study conducted a literature review of automated pig feeding systems and explored recent advancements. We conducted a cost-benefit analysis to assess the economic feasibility of implementing an automated feeding system in pig farming. Finally, the case study site, a pig farm in Kazakhstan, has been introduced to provide key information. Results The results described an automated pig feeding system suitable for a farm with 500 pigs in Kazakhstan. The case study was further enhanced using a simplified cost-benefit analysis tailored to the farm's needs and circumstances. Conclusion The designed automated pig feeding system is a marked advancement that seamlessly integrates the currently available automation and management technologies. Its distinguishing feature is the inclusion of remote control capabilities and real-time data provision, which utilize modern technology to transform pig farming management.
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Affiliation(s)
- Gulmira K. Dambaulova
- Regional Smart-Center, A. Baitursynov Kostanay Regional University, Kostanay, Kazakhstan
| | - Vladimir A. Madin
- Department of Software Development and Maintenance, A. Baitursynov Kostanay Regional University, Kostanay, Kazakhstan
| | - Zheniskul A. Utebayeva
- Department of Accounting and Management, A. Baitursynov Kostanay Regional University, Kostanay, Kazakhstan
| | - Madina K. Baimyrzaeva
- Department of Economic and General Education Disciplines, Eurasian Law Academy named after D.A. Kunaev, Almaty, Kazakhstan
| | - Leila Z. Shora
- Regional Smart-Center, A. Baitursynov Kostanay Regional University, Kostanay, Kazakhstan
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Elliott KC, Werkheiser I. A Framework for Transparency in Precision Livestock Farming. Animals (Basel) 2023; 13:3358. [PMID: 37958113 PMCID: PMC10648797 DOI: 10.3390/ani13213358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 10/20/2023] [Accepted: 10/25/2023] [Indexed: 11/15/2023] Open
Abstract
As precision livestock farming (PLF) technologies emerge, it is important to consider their social and ethical dimensions. Reviews of PLF have highlighted the importance of considering ethical issues related to privacy, security, and welfare. However, little attention has been paid to ethical issues related to transparency regarding these technologies. This paper proposes a framework for developing responsible transparency in the context of PLF. It examines the kinds of information that could be ethically important to disclose about these technologies, the different audiences that might care about this information, the challenges involved in achieving transparency for these audiences, and some promising strategies for addressing these challenges. For example, with respect to the information to be disclosed, efforts to foster transparency could focus on: (1) information about the goals and priorities of those developing PLF systems; (2) details about how the systems operate; (3) information about implicit values that could be embedded in the systems; and/or (4) characteristics of the machine learning algorithms often incorporated into these systems. In many cases, this information is likely to be difficult to obtain or communicate meaningfully to relevant audiences (e.g., farmers, consumers, industry, and/or regulators). Some of the potential steps for addressing these challenges include fostering collaborations between the developers and users of PLF systems, developing techniques for identifying and disclosing important forms of information, and pursuing forms of PLF that can be responsibly employed with less transparency. Given the complexity of transparency and its ethical and practical importance, a framework for developing and evaluating transparency will be an important element of ongoing PLF research.
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Affiliation(s)
- Kevin C. Elliott
- Lyman Briggs College, Department of Fisheries and Wildlife, and Department of Philosophy, Michigan State University, East Lansing, MI 48825, USA
| | - Ian Werkheiser
- Department of Philosophy, University of Texas Rio Grande Valley, Edinburg, TX 78539, USA
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Kapun A, Adrion F, Gallmann E. Evaluating the Activity of Pigs with Radio-Frequency Identification and Virtual Walking Distances. Animals (Basel) 2023; 13:3112. [PMID: 37835719 PMCID: PMC10571748 DOI: 10.3390/ani13193112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 09/28/2023] [Accepted: 09/29/2023] [Indexed: 10/15/2023] Open
Abstract
Monitoring the activity of animals can help with assessing their health status. We monitored the walking activity of fattening pigs using a UHF-RFID system. Four hundred fattening pigs with UHF-RFID ear tags were recorded by RFID antennas at the troughs, playing devices and drinkers during the fattening period. A minimum walking distance, or virtual walking distance, was determined for each pig per day by calculating the distances between two consecutive reading areas. This automatically calculated value was used as an activity measure and not only showed differences between the pigs but also between different fattening stages. The longer the fattening periods lasted, the less walking activity was detected. The virtual walking distance ranged between 281 m on average in the first fattening stage and about 141 m in the last fattening stage in a restricted environment. The findings are similar to other studies considering walking distances of fattening pigs, but are far less labor-intensive and time-consuming than direct observations.
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Affiliation(s)
- Anita Kapun
- Institute of Agricultural Engineering, University of Hohenheim, Garbenstraße 9, 70599 Stuttgart, Germany; (F.A.); (E.G.)
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8
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Wang Z, Doekes H, Bijma P. Towards genetic improvement of social behaviours in livestock using large-scale sensor data: data simulation and genetic analysis. Genet Sel Evol 2023; 55:67. [PMID: 37770844 PMCID: PMC10537099 DOI: 10.1186/s12711-023-00840-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Accepted: 09/11/2023] [Indexed: 09/30/2023] Open
Abstract
BACKGROUND Harmful social behaviours, such as injurious feather pecking in poultry and tail biting in swine, reduce animal welfare and production efficiency. While these behaviours are heritable, selective breeding is still limited due to a lack of individual phenotyping methods for large groups and proper genetic models. In the near future, large-scale longitudinal data on social behaviours will become available, e.g. through computer vision techniques, and appropriate genetic models will be needed to analyse such data. In this paper, we investigated prospects for genetic improvement of social traits recorded in large groups by (1) developing models to simulate and analyse large-scale longitudinal data on social behaviours, and (2) investigating required sample sizes to obtain reasonable accuracies of estimated genetic parameters and breeding values (EBV). RESULTS Latent traits were defined as representing tendencies of individuals to be engaged in social interactions by distinguishing between performer and recipient effects. Animal movement was assumed random and without genetic variation, and performer and recipient interaction effects were assumed constant over time. Based on the literature, observed-scale heritabilities ([Formula: see text]) of performer and recipient effects were both set to 0.05, 0.1, or 0.2, and the genetic correlation ([Formula: see text]) between those effects was set to - 0.5, 0, or 0.5. Using agent-based modelling, we simulated ~ 200,000 interactions for 2000 animals (~ 1000 interactions per animal) with a half-sib family structure. Variance components and breeding values were estimated with a general linear mixed model. The estimated genetic parameters did not differ significantly from the true values. When all individuals and interactions were included in the analysis, the accuracy of EBV was 0.61, 0.70, and 0.76 for [Formula: see text] = 0.05, 0.1, and 0.2, respectively (for [Formula: see text]= 0). Including 2000 individuals each with only ~ 100 interactions, already yielded promising accuracies of 0.47, 0.60, and 0.71 for [Formula: see text] = 0.05, 0.1, and 0.2, respectively (with [Formula: see text] = 0). Similar results were found with [Formula: see text] of - 0.5 or 0.5. CONCLUSIONS We developed models to simulate and genetically analyse social behaviours for animals that are kept in large groups, anticipating the availability of large-scale longitudinal data in the near future. We obtained promising accuracies of EBV with ~ 100 interactions per individual, which would correspond to a few weeks of recording. Therefore, we conclude that animal breeding can be a promising strategy to improve social behaviours in livestock.
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Affiliation(s)
- Zhuoshi Wang
- Animal Breeding and Genomics, Wageningen University and Research, P.O. Box 338, 6700 AH Wageningen, The Netherlands
| | - Harmen Doekes
- Animal Breeding and Genomics, Wageningen University and Research, P.O. Box 338, 6700 AH Wageningen, The Netherlands
| | - Piter Bijma
- Animal Breeding and Genomics, Wageningen University and Research, P.O. Box 338, 6700 AH Wageningen, The Netherlands
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Voogt AM, Schrijver RS, Temürhan M, Bongers JH, Sijm DTHM. Opportunities for Regulatory Authorities to Assess Animal-Based Measures at the Slaughterhouse Using Sensor Technology and Artificial Intelligence: A Review. Animals (Basel) 2023; 13:3028. [PMID: 37835634 PMCID: PMC10571985 DOI: 10.3390/ani13193028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 09/19/2023] [Accepted: 09/20/2023] [Indexed: 10/15/2023] Open
Abstract
Animal-based measures (ABMs) are the preferred way to assess animal welfare. However, manual scoring of ABMs is very time-consuming during the meat inspection. Automatic scoring by using sensor technology and artificial intelligence (AI) may bring a solution. Based on review papers an overview was made of ABMs recorded at the slaughterhouse for poultry, pigs and cattle and applications of sensor technology to measure the identified ABMs. Also, relevant legislation and work instructions of the Dutch Regulatory Authority (RA) were scanned on applied ABMs. Applications of sensor technology in a research setting, on farm or at the slaughterhouse were reported for 10 of the 37 ABMs identified for poultry, 4 of 32 for cattle and 13 of 41 for pigs. Several applications are related to aspects of meat inspection. However, by European law meat inspection must be performed by an official veterinarian, although there are exceptions for the post mortem inspection of poultry. The examples in this study show that there are opportunities for using sensor technology by the RA to support the inspection and to give more insight into animal welfare risks. The lack of external validation for multiple commercially available systems is a point of attention.
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Affiliation(s)
- Annika M. Voogt
- Office for Risk Assessment & Research (BuRO), Netherlands Food and Consumer Product Safety Authority (NVWA), P.O. Box 43006, 3540 AA Utrecht, The Netherlands
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Akinyemi BE, Akaichi F, Siegford JM, Turner SP. US Swine Industry Stakeholder Perceptions of Precision Livestock Farming Technology: A Q-Methodology Study. Animals (Basel) 2023; 13:2930. [PMID: 37760329 PMCID: PMC10525814 DOI: 10.3390/ani13182930] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Revised: 09/12/2023] [Accepted: 09/13/2023] [Indexed: 09/29/2023] Open
Abstract
This study used the Q-methodology approach to analyze perceptions of precision livestock farming (PLF) technology held by stakeholders directly or indirectly involved in the US swine industry. To see if stakeholders' perceptions of PLF changed over time as PLF is a rapidly evolving field, we deliberately followed up with stakeholders we had interviewed 6 months earlier. We identified three distinct points of view: PLF improves farm management, animal welfare, and laborer work conditions; PLF does not solve swine industry problems; PLF has limitations and could lead to data ownership conflict. Stakeholders with in-depth knowledge of PLF technology demonstrated elevated levels of optimism about it, whereas those with a basic understanding were skeptical of PLF claims. Despite holding different PLF views, all stakeholders agreed on the significance of training to enhance PLF usefulness and its eventual adoption. In conclusion, we believe this study's results hold promise for helping US swine industry stakeholders make better-informed decisions about PLF technology implementation.
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Affiliation(s)
- Babatope E. Akinyemi
- Department of Animal Science, Michigan State University, East Lansing, MI 48824, USA;
| | - Faical Akaichi
- Rural Economy, Environment and Society Department, Scotland’s Rural College (SRUC), Edinburgh EH9 3JG, UK;
| | - Janice M. Siegford
- Department of Animal Science, Michigan State University, East Lansing, MI 48824, USA;
| | - Simon P. Turner
- Animal and Veterinary Sciences Department, Scotland’s Rural College, Easter Bush, Edinburgh EH25 9RG, UK;
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Taghipoor M, Pastell M, Martin O, Nguyen Ba H, van Milgen J, Doeschl-Wilson A, Loncke C, Friggens NC, Puillet L, Muñoz-Tamayo R. Animal board invited review: Quantification of resilience in farm animals. Animal 2023; 17:100925. [PMID: 37690272 DOI: 10.1016/j.animal.2023.100925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Revised: 07/17/2023] [Accepted: 07/20/2023] [Indexed: 09/12/2023] Open
Abstract
Resilience, when defined as the capacity of an animal to respond to short-term environmental challenges and to return to the prechallenge status, is a dynamic and complex trait. Resilient animals can reinforce the capacity of the herd to cope with often fluctuating and unpredictable environmental conditions. The ability of modern technologies to simultaneously record multiple performance measures of individual animals over time is a huge step forward to evaluate the resilience of farm animals. However, resilience is not directly measurable and requires mathematical models with biologically meaningful parameters to obtain quantitative resilience indicators. Furthermore, interpretive models may also be needed to determine the periods of perturbation as perceived by the animal. These applications do not require explicit knowledge of the origin of the perturbations and are developed based on real-time information obtained in the data during and outside the perturbation period. The main objective of this paper was to review and illustrate with examples, different modelling approaches applied to this new generation of data (i.e., with high-frequency recording) to detect and quantify animal responses to perturbations. Case studies were developed to illustrate alternative approaches to real-time and post-treatment of data. In addition, perspectives on the use of hybrid models for better understanding and predicting animal resilience are presented. Quantification of resilience at the individual level makes possible the inclusion of this trait into future breeding programmes. This would allow improvement of the capacity of animals to adapt to a changing environment, and therefore potentially reduce the impact of disease and other environmental stressors on animal welfare. Moreover, such quantification allows the farmer to tailor the management strategy to help individual animals to cope with the perturbation, hence reducing the use of pharmaceuticals, and decreasing the level of pain of the animal.
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Affiliation(s)
- M Taghipoor
- Université Paris-Saclay, INRAE, AgroParisTech, UMR Modélisation Systémique Appliquée aux Ruminants, 91120 Palaiseau, France.
| | - M Pastell
- Natural Resources Institute Finland (Luke), Production Systems, Helsinki, Finland
| | - O Martin
- Université Paris-Saclay, INRAE, AgroParisTech, UMR Modélisation Systémique Appliquée aux Ruminants, 91120 Palaiseau, France
| | - H Nguyen Ba
- Univ Clermont Auvergne, INRAE, VetAgro Sup, UMR Herbivores, F-63122 SaintGenes Champanelle, France
| | | | - A Doeschl-Wilson
- The Roslin Institute, University of Edinburgh, Easter Bush EH25 9RG, UK
| | - C Loncke
- Université Paris-Saclay, INRAE, AgroParisTech, UMR Modélisation Systémique Appliquée aux Ruminants, 91120 Palaiseau, France
| | - N C Friggens
- Université Paris-Saclay, INRAE, AgroParisTech, UMR Modélisation Systémique Appliquée aux Ruminants, 91120 Palaiseau, France
| | - L Puillet
- Université Paris-Saclay, INRAE, AgroParisTech, UMR Modélisation Systémique Appliquée aux Ruminants, 91120 Palaiseau, France
| | - R Muñoz-Tamayo
- Université Paris-Saclay, INRAE, AgroParisTech, UMR Modélisation Systémique Appliquée aux Ruminants, 91120 Palaiseau, France
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12
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Morelle K, Barasona JA, Bosch J, Heine G, Daim A, Arnold J, Bauch T, Kosowska A, Cadenas-Fernández E, Aviles MM, Zuñiga D, Wikelski M, Vizcaino-Sanchez JM, Safi K. Accelerometer-based detection of African swine fever infection in wild boar. Proc Biol Sci 2023; 290:20231396. [PMID: 37644835 PMCID: PMC10465979 DOI: 10.1098/rspb.2023.1396] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Accepted: 07/31/2023] [Indexed: 08/31/2023] Open
Abstract
Infectious wildlife diseases that circulate at the interface with domestic animals pose significant threats worldwide and require early detection and warning. Although animal tracking technologies are used to discern behavioural changes, they are rarely used to monitor wildlife diseases. Common disease-induced behavioural changes include reduced activity and lethargy ('sickness behaviour'). Here, we investigated whether accelerometer sensors could detect the onset of African swine fever (ASF), a viral infection that induces high mortality in suids for which no vaccine is currently available. Taking advantage of an experiment designed to test an oral ASF vaccine, we equipped 12 wild boars with an accelerometer tag and quantified how ASF affects their activity pattern and behavioural fingerprint, using overall dynamic body acceleration. Wild boars showed a daily reduction in activity of 10-20% from the healthy to the viremia phase. Using change point statistics and comparing healthy individuals living in semi-free and free-ranging conditions, we show how the onset of disease-induced sickness can be detected and how such early detection could work in natural settings. Timely detection of infection in animals is crucial for disease surveillance and control, and accelerometer technology on sentinel animals provides a viable complementary tool to existing disease management approaches.
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Affiliation(s)
- Kevin Morelle
- Department of Migration, Max Planck Institute of Animal Behaviour, Radolfzell, Germany
- Department of Game Management and Wildlife Biology, Czech University of Life Science, Prague, Czech Republic
| | - Jose Angel Barasona
- VISAVET Health Surveillance Center, Department of Animal Health, Complutense University of Madrid, 28040 Madrid, Spain
| | - Jaime Bosch
- VISAVET Health Surveillance Center, Department of Animal Health, Complutense University of Madrid, 28040 Madrid, Spain
| | - Georg Heine
- Department of Migration, Max Planck Institute of Animal Behaviour, Radolfzell, Germany
| | - Andreas Daim
- Department of Integrative Biology and Biodiversity Research, University of Natural Resources and Life Sciences, Institute of Wildlife Biology and Game Management (BOKU), Vienna, Austria
| | - Janosch Arnold
- Agricultural Centre Baden-Württemberg, Wildlife Research Unit, Aulendorf, Germany
| | - Toralf Bauch
- Agricultural Centre Baden-Württemberg, Wildlife Research Unit, Aulendorf, Germany
| | - Aleksandra Kosowska
- VISAVET Health Surveillance Center, Department of Animal Health, Complutense University of Madrid, 28040 Madrid, Spain
| | - Estefanía Cadenas-Fernández
- VISAVET Health Surveillance Center, Department of Animal Health, Complutense University of Madrid, 28040 Madrid, Spain
| | | | - Daniel Zuñiga
- Department of Migration, Max Planck Institute of Animal Behaviour, Radolfzell, Germany
| | - Martin Wikelski
- Department of Migration, Max Planck Institute of Animal Behaviour, Radolfzell, Germany
- Centre for the Advanced Study of Collective Behaviour, University of Konstanz, Konstanz, Germany
| | - Jose Manuel Vizcaino-Sanchez
- VISAVET Health Surveillance Center, Department of Animal Health, Complutense University of Madrid, 28040 Madrid, Spain
| | - Kamran Safi
- Department of Migration, Max Planck Institute of Animal Behaviour, Radolfzell, Germany
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13
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Doidge C, Frössling J, Dórea FC, Ordell A, Vidal G, Kaler J. Social and ethical implications of data and technology use on farms: a qualitative study of Swedish dairy and pig farmers. Front Vet Sci 2023; 10:1171107. [PMID: 37675073 PMCID: PMC10477671 DOI: 10.3389/fvets.2023.1171107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Accepted: 08/08/2023] [Indexed: 09/08/2023] Open
Abstract
Introduction Livestock farmers are being increasingly encouraged to adopt digital health technologies on their farms. Digital innovations may have unintended consequences, but there tends to be a pro-innovation bias in previous literature. This has led to a movement towards "responsible innovation," an approach that questions the social and ethical challenges of research and innovation. This paper explores the social and ethical issues of data and technologies on Swedish dairy and pig farms from a critical perspective. Methods Six focus groups were conducted with thirteen dairy and thirteen pig farmers. The data were analysed using reflexive thematic analysis and a digital critical health lens, which focuses on concepts of identity and power. Results and discussion The analysis generated four themes: extending the self, sense of agency, quantifying animals, and managing human labour. The findings suggest that technologies can change and form the identities of farmers, their workers, and animals by increasing the visibility of behaviours and bodies through data collection. Technologies can also facilitate techniques of power such as conforming to norms, hierarchical surveillance, and segregation of populations based on data. There were many contradictions in the way that technology was used on farms which suggests that farmers cannot be dichotomised into those who are opposed to and those that support adoption of technologies. Emotions and morality played an important role in the way animals were managed and technologies were used by farmers. Thus, when developing innovations, we need to consider users' feelings and attachments towards the technologies. Technologies have different impacts on farmers and farm workers which suggests that we need to ensure that we understand the perspectives of multiple user groups when developing innovations, including those that might be least empowered.
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Affiliation(s)
- Charlotte Doidge
- School of Veterinary Medicine and Science, University of Nottingham, Nottingham, United Kingdom
| | - Jenny Frössling
- Department of Disease Control and Epidemiology, National Veterinary Institute (SVA), Uppsala, Sweden
- Department of Animal Environment and Health, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - Fernanda C. Dórea
- Department of Disease Control and Epidemiology, National Veterinary Institute (SVA), Uppsala, Sweden
| | - Anna Ordell
- Department of Disease Control and Epidemiology, National Veterinary Institute (SVA), Uppsala, Sweden
| | - Gema Vidal
- Department of Disease Control and Epidemiology, National Veterinary Institute (SVA), Uppsala, Sweden
| | - Jasmeet Kaler
- School of Veterinary Medicine and Science, University of Nottingham, Nottingham, United Kingdom
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14
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Wang S, Jiang H, Qiao Y, Jiang S. A Method for Obtaining 3D Point Cloud Data by Combining 2D Image Segmentation and Depth Information of Pigs. Animals (Basel) 2023; 13:2472. [PMID: 37570282 PMCID: PMC10417003 DOI: 10.3390/ani13152472] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Revised: 07/21/2023] [Accepted: 07/25/2023] [Indexed: 08/13/2023] Open
Abstract
This paper proposes a method for automatic pig detection and segmentation using RGB-D data for precision livestock farming. The proposed method combines the enhanced YOLOv5s model with the Res2Net bottleneck structure, resulting in improved fine-grained feature extraction and ultimately enhancing the precision of pig detection and segmentation in 2D images. Additionally, the method facilitates the acquisition of 3D point cloud data of pigs in a simpler and more efficient way by using the pig mask obtained in 2D detection and segmentation and combining it with depth information. To evaluate the effectiveness of the proposed method, two datasets were constructed. The first dataset consists of 5400 images captured in various pig pens under diverse lighting conditions, while the second dataset was obtained from the UK. The experimental results demonstrated that the improved YOLOv5s_Res2Net achieved a mAP@0.5:0.95 of 89.6% and 84.8% for both pig detection and segmentation tasks on our dataset, while achieving a mAP@0.5:0.95 of 93.4% and 89.4% on the Edinburgh pig behaviour dataset. This approach provides valuable insights for improving pig management, conducting welfare assessments, and estimating weight accurately.
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Affiliation(s)
- Shunli Wang
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China; (S.W.); (H.J.)
| | - Honghua Jiang
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China; (S.W.); (H.J.)
| | - Yongliang Qiao
- Australian Institute for Machine Learning (AIML), The University of Adelaide, Adelaide, SA 5005, Australia
| | - Shuzhen Jiang
- Key Laboratory of Efficient Utilisation of Non-Grain Feed Resources (Co-Construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, Department of Animal Science and Technology, Shandong Agricultural University, Tai’an 271018, China;
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15
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Campler MR, Cheng TY, Arruda AG, Flint M, Kieffer JD, Youngblood B, Bowman AS. Refinement of water-based foam depopulation procedures for finisher pigs during field conditions: Welfare implications and logistical aspects. Prev Vet Med 2023; 217:105974. [PMID: 37423152 DOI: 10.1016/j.prevetmed.2023.105974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2022] [Revised: 05/01/2023] [Accepted: 06/29/2023] [Indexed: 07/11/2023]
Abstract
Water-based foam (WBF) depopulation is currently being researched as an alternative for rapid destruction of swine populations under emergency circumstances. Appropriate guidelines are needed to maintain method reliability and depopulation efficacy while minimizing animal distress under field conditions. Finisher pigs were depopulated using WBF with a 7.5-minute dwell time in two trials to evaluate the effect of; trial 1) foam fill level (1.5, 1.75, or 2.0 times the pig's head height) and trial 2) foam fill rate (slow, medium, or fast) on aversive pig responses (surface breaks, vocalization, and escape attempts) and time to cessation of cardiac activity. Activity and cardiac activity were recorded using subcutaneous bio-loggers for swine in trial 2. The average time to cessation of movement (COM) from the start of foam filling was compared for the foam fill rate groups using a generalized linear mixed effect model under Poisson distribution. Foam rate group was used as an independent variable, and replicates as a random effect. For trial 1, the average (mm:ss ± SD) time to fill completion was 01:18 ± 00:00, 00:47 ± 00:05, and 00:54 ± 00:05, for 1.5, 1.75, and 2.0 times the pig's head height, respectively. For trial 2, the average time to fill completion was 03:57 ± 00:32, 01:14 ± 00:23 and 00:44 ± 00:03, and the average time (mm:ss ± SE) to COM was 05:22 ± 00:21, 03:32 ± 00:14, and 03:11 ± 00:13 for slow, medium, and fast fill rate groups, respectively. A higher number of aversive pig responses were observed for the lowest foam fill level and slowest foam fill rate compared to increased fill levels and faster fill rates. For trial 2 the median (mm:ss ± IQR) time to fatal arrhythmia was 09:53 ± 02:48, 11:19 ± 04:04, and 10:57 ± 00:47 post-foam initiation for fast, medium, and slow foam rate groups, respectively. Time to cessation of cardiac activity was significantly shorter for the fast foam rate group compared to medium and slow foam rates groups (P = 0.04). For both trials, vocalizations were absent, and all pigs were unconscious following the 7.5-minute dwell time and no pigs needed a secondary euthanasia method. This WBF study showed that slower fill rates and low foam fill levels may extend the time until cessation of cardiac activity in swine during depopulation. A conservative recommendation with consideration of swine welfare during an emergency scenario would be a minimum foam fill level twice the pig's head height and a foam fill rate capable of covering pigs in foam within 60 s to minimize aversive responses and expedite cessation of cardiac activity.
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Affiliation(s)
- Magnus R Campler
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, The Ohio State University, Columbus, OH, USA
| | - Ting-Yu Cheng
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, The Ohio State University, Columbus, OH, USA
| | - Andréia G Arruda
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, The Ohio State University, Columbus, OH, USA
| | - Mark Flint
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, The Ohio State University, Columbus, OH, USA
| | - Justin D Kieffer
- Department of Animal Sciences, College of Food, Agricultural and Environmental Sciences, The Ohio State University, Columbus, OH, USA
| | - Brad Youngblood
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, The Ohio State University, Columbus, OH, USA
| | - Andrew S Bowman
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, The Ohio State University, Columbus, OH, USA.
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16
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Björkman S, Kauffold J, Kaiser MØ. Reproductive health of the sow during puerperium. Mol Reprod Dev 2023; 90:561-579. [PMID: 36054784 DOI: 10.1002/mrd.23642] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Revised: 08/04/2022] [Accepted: 08/18/2022] [Indexed: 11/10/2022]
Abstract
The modern hyperprolific sow is susceptible to metabolic disease and chronic inflammation. The most sensitive phase is parturition, when the sow experiences systemic inflammation and stress, and major changes in metabolism and endocrinology. Resolution of inflammation and stress needs to happen quickly to ensure good reproductive health during puerperium. If the sow fails to adapt to these changes, puerperal disease may occur. The economically most important puerperal disease complex is the postpartum dysgalactia syndrome (PPDS). Other puerperal diseases include infections of the urogenital tract. Diagnosis of PPDS and urogenital disease on-farm is challenging but several diagnostic methods, including clinical examination, behavioral observations, ultrasonography and biomarkers are available. Ultrasonography is an excellent tool for monitoring the health of the urogenital tract, the mammary gland, and uterine involution and guide further diagnostic interventions. Biomarkers such as Chromogranin A, tumor necrosis factor-α, and interleukin-6 represent promising tools to monitor general health and the systemic state of inflammation and oxidative stress of the sow. Nonsteroidal anti-inflammatory drugs, dopamine antagonists, and oxytocin are promising to address the symptoms of PPDS. Reducing of stress, improving nutrition and intestinal health, and supporting animal welfare-friendly husbandry help in the prevention of PPDS.
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Affiliation(s)
- Stefan Björkman
- Department of Production Animal Medicine, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland
| | - Johannes Kauffold
- Clinic for Ruminants and Swine, Faculty of Veterinary Medicine, University of Leipzig, Leipzig, Germany
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17
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Jiang B, Tang W, Cui L, Deng X. Precision Livestock Farming Research: A Global Scientometric Review. Animals (Basel) 2023; 13:2096. [PMID: 37443894 DOI: 10.3390/ani13132096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Revised: 06/16/2023] [Accepted: 06/21/2023] [Indexed: 07/15/2023] Open
Abstract
Precision livestock farming (PLF) utilises information technology to continuously monitor and manage livestock in real-time, which can improve individual animal health, welfare, productivity and the environmental impact of animal husbandry, contributing to the economic, social and environmental sustainability of livestock farming. PLF has emerged as a pivotal area of multidisciplinary interest. In order to clarify the knowledge evolution and hotspot replacement of PLF research, based on the relevant data from the Web of Science database from 1973 to 2023, this study analyzed the main characteristics, research cores and hot topics of PLF research via CiteSpace. The results point to a significant increase in studies on PLF, with countries having advanced livestock farming systems in Europe and America publishing frequently and collaborating closely across borders. Universities in various countries have been leading the research, with Daniel Berckmans serving as the academic leader. Research primarily focuses on animal science, veterinary science, computer science, agricultural engineering, and environmental science. Current research hotspots center around precision dairy and cattle technology, intelligent systems, and animal behavior, with deep learning, accelerometer, automatic milking systems, lameness, estrus detection, and electronic identification being the main research directions, and deep learning and machine learning represent the forefront of current research. Research hot topics mainly include social science in PLF, the environmental impact of PLF, information technology in PLF, and animal welfare in PLF. Future research in PLF should prioritize inter-institutional and inter-scholar communication and cooperation, integration of multidisciplinary and multimethod research approaches, and utilization of deep learning and machine learning. Furthermore, social science issues should be given due attention in PLF, and the integration of intelligent technologies in animal management should be strengthened, with a focus on animal welfare and the environmental impact of animal husbandry, to promote its sustainable development.
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Affiliation(s)
- Bing Jiang
- College of Economics and Management, Northeast Agricultural University, Harbin 150030, China
- Development Research Center of Modern Agriculture, Northeast Agricultural University, Harbin 150030, China
| | - Wenjie Tang
- College of Economics and Management, Northeast Agricultural University, Harbin 150030, China
| | - Lihang Cui
- College of Economics and Management, Northeast Agricultural University, Harbin 150030, China
| | - Xiaoshang Deng
- College of Economics and Management, Northeast Agricultural University, Harbin 150030, China
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18
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Garrido LFC, Sato STM, Costa LB, Daros RR. Can We Reliably Detect Respiratory Diseases through Precision Farming? A Systematic Review. Animals (Basel) 2023; 13:ani13071273. [PMID: 37048529 PMCID: PMC10093556 DOI: 10.3390/ani13071273] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Revised: 03/14/2023] [Accepted: 03/17/2023] [Indexed: 04/14/2023] Open
Abstract
Respiratory diseases commonly affect livestock species, negatively impacting animal's productivity and welfare. The use of precision livestock farming (PLF) applied in respiratory disease detection has been developed for several species. The aim of this systematic review was to evaluate if PLF technologies can reliably monitor clinical signs or detect cases of respiratory diseases. A technology was considered reliable if high performance was achieved (sensitivity > 90% and specificity or precision > 90%) under field conditions and using a reliable reference test. Risk of bias was assessed, and only technologies tested in studies with low risk of bias were considered reliable. From 23 studies included-swine (13), poultry (6), and bovine (4) -only three complied with our reliability criteria; however, two of these were considered to have a high risk of bias. Thus, only one swine technology fully fit our criteria. Future studies should include field tests and use previously validated reference tests to assess technology's performance. In conclusion, relying completely on PLF for monitoring respiratory diseases is still a challenge, though several technologies are promising, having high performance in field tests.
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Affiliation(s)
- Luís F C Garrido
- Graduate Program in Animal Science, School of Medicine and Life Sciences, Pontifícia Universidade Católica do Paraná, Curitiba 80215-901, Brazil
| | - Sabrina T M Sato
- Graduate Program in Animal Science, School of Medicine and Life Sciences, Pontifícia Universidade Católica do Paraná, Curitiba 80215-901, Brazil
| | - Leandro B Costa
- Graduate Program in Animal Science, School of Medicine and Life Sciences, Pontifícia Universidade Católica do Paraná, Curitiba 80215-901, Brazil
| | - Ruan R Daros
- Graduate Program in Animal Science, School of Medicine and Life Sciences, Pontifícia Universidade Católica do Paraná, Curitiba 80215-901, Brazil
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19
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Mielke F, Van Ginneken C, Aerts P. A workflow for automatic, high precision livestock diagnostic screening of locomotor kinematics. Front Vet Sci 2023; 10:1111140. [PMID: 36960143 PMCID: PMC10028250 DOI: 10.3389/fvets.2023.1111140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Accepted: 02/13/2023] [Indexed: 03/09/2023] Open
Abstract
Locomotor kinematics have been challenging inputs for automated diagnostic screening of livestock. Locomotion is a highly variable behavior, and influenced by subject characteristics (e.g., body mass, size, age, disease). We assemble a set of methods from different scientific disciplines, composing an automatic, high through-put workflow which can disentangle behavioral complexity and generate precise individual indicators of non-normal behavior for application in diagnostics and research. For this study, piglets (Sus domesticus) were filmed from lateral perspective during their first 10 h of life, an age at which maturation is quick and body mass and size have major consequences for survival. We then apply deep learning methods for point digitization, calculate joint angle profiles, and apply information-preserving transformations to retrieve a multivariate kinematic data set. We train probabilistic models to infer subject characteristics from kinematics. Model accuracy was validated for strides from piglets of normal birth weight (i.e., the category it was trained on), but the models infer the body mass and size of low birth weight (LBW) piglets (which were left out of training, out-of-sample inference) to be "normal." The age of some (but not all) low birth weight individuals was underestimated, indicating developmental delay. Such individuals could be identified automatically, inspected, and treated accordingly. This workflow has potential for automatic, precise screening in livestock management.
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Affiliation(s)
- Falk Mielke
- Functional Morphology, Department of Biology, Faculty of Science, University of Antwerp, Antwerp, Belgium
- Comparative Perinatal Development, Department of Veterinary Sciences, University of Antwerp, Antwerp, Belgium
| | - Chris Van Ginneken
- Comparative Perinatal Development, Department of Veterinary Sciences, University of Antwerp, Antwerp, Belgium
| | - Peter Aerts
- Functional Morphology, Department of Biology, Faculty of Science, University of Antwerp, Antwerp, Belgium
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20
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Bortoluzzi EM, Goering MJ, Ochoa SJ, Holliday AJ, Mumm JM, Nelson CE, Wu H, Mote BE, Psota ET, Schmidt TB, Jaberi-Douraki M, Hulbert LE. Evaluation of Precision Livestock Technology and Human Scoring of Nursery Pigs in a Controlled Immune Challenge Experiment. Animals (Basel) 2023; 13:ani13020246. [PMID: 36670787 PMCID: PMC9854951 DOI: 10.3390/ani13020246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2022] [Revised: 12/08/2022] [Accepted: 01/04/2023] [Indexed: 01/12/2023] Open
Abstract
The objectives were to determine the sensitivity, specificity, and cutoff values of a visual-based precision livestock technology (NUtrack), and determine the sensitivity and specificity of sickness score data collected with the live observation by trained human observers. At weaning, pigs (n = 192; gilts and barrows) were randomly assigned to one of twelve pens (16/pen) and treatments were randomly assigned to pens. Sham-pen pigs all received subcutaneous saline (3 mL). For LPS-pen pigs, all pigs received subcutaneous lipopolysaccharide (LPS; 300 μg/kg BW; E. coli O111:B4; in 3 mL of saline). For the last treatment, eight pigs were randomly assigned to receive LPS, and the other eight were sham (same methods as above; half-and-half pens). Human data from the day of the challenge presented high true positive and low false positive rates (88.5% sensitivity; 85.4% specificity; 0.871 Area Under Curve, AUC), however, these values declined when half-and-half pigs were scored (75% sensitivity; 65.5% specificity; 0.703 AUC). Precision technology measures had excellent AUC, sensitivity, and specificity for the first 72 h after treatment and AUC values were >0.970, regardless of pen treatment. These results indicate that precision technology has a greater potential for identifying pigs during a natural infectious disease event than trained professionals using timepoint sampling.
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Affiliation(s)
- Eduarda M. Bortoluzzi
- Department of Animal Sciences and Industry, Kansas State University, Manhattan, KS 66506, USA
| | - Mikayla J. Goering
- Department of Animal Sciences and Industry, Kansas State University, Manhattan, KS 66506, USA
| | - Sara J. Ochoa
- Department of Animal Sciences and Industry, Kansas State University, Manhattan, KS 66506, USA
| | - Aaron J. Holliday
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln, NE 68505, USA
| | - Jared M. Mumm
- Department of Animal Sciences and Industry, Kansas State University, Manhattan, KS 66506, USA
| | - Catherine E. Nelson
- Department of Animal Sciences and Industry, Kansas State University, Manhattan, KS 66506, USA
| | - Hui Wu
- Department of Statistics, Kansas State University, Manhattan, KS 66506, USA
| | - Benny E. Mote
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln, NE 68505, USA
| | - Eric T. Psota
- Department of Electrical and Computer Engineering, University of Nebraska-Lincoln, Lincoln, NE 68588, USA
| | - Ty B. Schmidt
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln, NE 68505, USA
| | - Majid Jaberi-Douraki
- Department of Statistics, Kansas State University, Manhattan, KS 66506, USA
- Department of Mathematics, Kansas State University, Manhattan, KS 66506, USA
- 1-DATA, Kansas State University Olathe, Olathe, KS 66061, USA
| | - Lindsey E. Hulbert
- Department of Animal Sciences and Industry, Kansas State University, Manhattan, KS 66506, USA
- Correspondence: ; Tel.: +1-785-477-2904
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21
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Sommer DM, Young JM, Sun X, López-Martínez G, Byrd CJ. Are infrared thermography, feeding behavior, and heart rate variability measures capable of characterizing group-housed sow social hierarchies? J Anim Sci 2023; 101:skad143. [PMID: 37158284 PMCID: PMC10199786 DOI: 10.1093/jas/skad143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Accepted: 05/04/2023] [Indexed: 05/10/2023] Open
Abstract
Group gestation housing is quickly becoming standard practice in commercial swine production. However, poor performance and welfare in group housed sows may result from the formation and maintenance of the social hierarchy within the pen. In the future, the ability to quickly characterize the social hierarchy via precision technologies could be beneficial to producers for identifying animals at risk of poor welfare outcomes. Therefore, the objective of this study was to investigate the use of infrared thermography (IRT), automated electronic sow feeding systems, and heart rate monitors as potential technologies for detecting the social hierarchy within five groups of sows. Behavioral data collection occurred for 12 h after introducing five sow groups (1-5; n = 14, 12, 15, 15, and 17, respectively) to group gestation housing to determine the social hierarchy and allocate individual sows to 1 of 4 rank quartiles (RQ 1-4). Sows within RQ1 were ranked highest while RQ4 sows were ranked lowest within the hierarchy. Infrared thermal images were taken behind the neck at the base of the ear of each sow on days 3, 15, 30, 45, 60, 75, 90, and 105 of the experiment. Two electronic sow feeders tracked feeding behavior throughout the gestation period. Heart rate monitors were worn by 10 randomly selected sows per repetition for 1 h prior to and 4 h after reintroduction to group gestation housing to collect heart rate variability (HRV). No differences were found between RQ for any IRT characteristic. Sows within RQ3 and RQ4 had the greatest number of visits to the electronic sow feeders overall (P < 0.04) but spent shorter time per visit in feeders (P < 0.05) than RQ1 and RQ2 sows. There was an interaction of RQ with hour for feed offered (P = 0.0003), with differences between RQ occurring in hour 0, 1, 2, and 8. Higher-ranked sows (RQ1 and RQ2) occupied the feeder for longer during the first hour than lower ranking sows (RQ3 and RQ4; P < 0.04), while RQ3 sows occupied the feeder longer than RQ1 sows during hour 6, 7, and 8 (P < 0.02). Heart beat interval (RR) collected prior to group housing introduction differed between RQ (P < 0.02 for all), with RQ3 sows exhibiting the lowest RR, followed by RQ4, RQ1, and RQ2. Rank quartile also affected standard deviation of RR (P = 0.0043), with RQ4 sows having the lowest, followed by RQ1, RQ3, and RQ2 sows. Overall, these results indicate that feeding behavior and HRV measures may be capable of characterizing social hierarchy in a group housing system.
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Affiliation(s)
- Dominique M Sommer
- Department of Animal Sciences, North Dakota State University, Fargo, ND 58108, USA
| | - Jennifer M Young
- Department of Animal Sciences, North Dakota State University, Fargo, ND 58108, USA
| | - Xin Sun
- Department of Agricultural and Biosystems Engineering, North Dakota State University, Fargo, ND 58108, USA
| | | | - Christopher J Byrd
- Department of Animal Sciences, North Dakota State University, Fargo, ND 58108, USA
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22
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Double-Camera Fusion System for Animal-Position Awareness in Farming Pens. Foods 2022; 12:foods12010084. [PMID: 36613301 PMCID: PMC9818956 DOI: 10.3390/foods12010084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Revised: 12/06/2022] [Accepted: 12/09/2022] [Indexed: 12/29/2022] Open
Abstract
In livestock breeding, continuous and objective monitoring of animals is manually unfeasible due to the large scale of breeding and expensive labour. Computer vision technology can generate accurate and real-time individual animal or animal group information from video surveillance. However, the frequent occlusion between animals and changes in appearance features caused by varying lighting conditions makes single-camera systems less attractive. We propose a double-camera system and image registration algorithms to spatially fuse the information from different viewpoints to solve these issues. This paper presents a deformable learning-based registration framework, where the input image pairs are initially linearly pre-registered. Then, an unsupervised convolutional neural network is employed to fit the mapping from one view to another, using a large number of unlabelled samples for training. The learned parameters are then used in a semi-supervised network and fine-tuned with a small number of manually annotated landmarks. The actual pixel displacement error is introduced as a complement to an image similarity measure. The performance of the proposed fine-tuned method is evaluated on real farming datasets and demonstrates significant improvement in lowering the registration errors than commonly used feature-based and intensity-based methods. This approach also reduces the registration time of an unseen image pair to less than 0.5 s. The proposed method provides a high-quality reference processing step for improving subsequent tasks such as multi-object tracking and behaviour recognition of animals for further analysis.
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23
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Identifying Early Indicators of Tail Biting in Pigs by Variable Selection Using Partial Least Squares Regression. Animals (Basel) 2022; 13:ani13010056. [PMID: 36611666 PMCID: PMC9817870 DOI: 10.3390/ani13010056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Revised: 12/19/2022] [Accepted: 12/21/2022] [Indexed: 12/28/2022] Open
Abstract
This study examined relevant variables for predicting the prevalence of pigs with a tail lesion in rearing (REA) and fattening (FAT). Tail lesions were recorded at two scoring days a week in six pens in both REA (10 batches, 840 scoring days) and FAT (5 batches, 624 scoring days). To select the variables that best explain the variation within the prevalence of pigs with a tail lesion, partial least squares regression models were used with the variable importance in projection (VIP) and regression coefficients (β) as selection criteria. In REA, five factors were extracted explaining 60.6% of the dependent variable's variance, whereas in FAT five extracted factors explained 62.4% of the dependent variable's variance. According to VIP and β, seven variables were selected in REA and six in FAT with the tail posture being the most important variable. In addition, skin lesions, treatment index in the suckling phase, water consumption (mean), activity time (mean; CV) and exhaust air rate (CV) were selected in REA. In FAT, additional musculoskeletal system issues, activity time (mean; CV) and exhaust air rate (mean; CV) were selected according to VIP and β. The selected variables indicate which variables should be collected in the stable to e.g., predict tail biting.
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Rosengart S, Chuppava B, Trost LS, Henne H, Tetens J, Traulsen I, Deermann A, Wendt M, Visscher C. Characteristics of thermal images of the mammary gland and of performance in sows differing in health status and parity. Front Vet Sci 2022; 9:920302. [PMID: 36118336 PMCID: PMC9480095 DOI: 10.3389/fvets.2022.920302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 08/09/2022] [Indexed: 11/13/2022] Open
Abstract
Precision livestock farming can combine sensors and complex data to provide a simple score of meaningful productivity, pig welfare, and farm sustainability, which are the main drivers of modern pig production. Examples include using infrared thermography to monitor the temperature of sows to detect the early stages of the disease. To take account of these drivers, we assigned 697 hybrid (BHZP db. Viktoria) sows to four parity groups. In addition, by pooling clinical findings from every sow and their piglets, sows were classified into three groups for the annotation: healthy, clinically suspicious, and diseased. Besides, the udder was thermographed, and performance data were documented. Results showed that the piglets of diseased sows with eighth or higher parity had the lowest daily weight gain [healthy; 192 g ± 31.2, clinically suspicious; 191 g ± 31.3, diseased; 148 g ± 50.3 (p < 0.05)] and the highest number of stillborn piglets (healthy; 2.2 ± 2.39, clinically suspicious; 2.0 ± 1.62, diseased; 3.91 ± 4.93). Moreover, all diseased sows showed higher maximal skin temperatures by infrared thermography of the udder (p < 0.05). Thus, thermography coupled with Artificial Intelligence (AI) systems can help identify and orient the diagnosis of symptomatic animals to prompt adequate reaction at the earliest time.
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Affiliation(s)
- Stephan Rosengart
- Clinic for Swine and Small Ruminants, Forensic Medicine and Ambulatory Service, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
- Institute for Animal Nutrition, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
| | - Bussarakam Chuppava
- Institute for Animal Nutrition, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
| | - Lea-Sophie Trost
- Department of Animal Sciences, Livestock Systems, Georg-August-University Göttingen, Göttingen, Germany
| | | | - Jens Tetens
- Department of Animal Sciences, University of Göttingen, Göttingen, Germany
| | - Imke Traulsen
- Department of Animal Sciences, Livestock Systems, Georg-August-University Göttingen, Göttingen, Germany
| | | | - Michael Wendt
- Clinic for Swine and Small Ruminants, Forensic Medicine and Ambulatory Service, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
| | - Christian Visscher
- Institute for Animal Nutrition, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
- *Correspondence: Christian Visscher
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Alves LKS, Gameiro AH, Schinckel AP, Garbossa CAP. Development of a Swine Production Cost Calculation Model. Animals (Basel) 2022; 12:ani12172229. [PMID: 36077949 PMCID: PMC9454430 DOI: 10.3390/ani12172229] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Revised: 08/16/2022] [Accepted: 08/24/2022] [Indexed: 11/26/2022] Open
Abstract
Simple Summary Swine production is a for-profit activity; however, most farms have deficient internal controls and empirical management and do not even know the cost of the market hog produced. Knowing the production cost of what will be commercialized is crucial for any process that involves business management, and in pig production, it is no different. However, the lack of a standard method and simple and easily accessible tools make it difficult for producers to organize the economic management of their businesses. In this sense, the present work aimed to develop a free and easy-to-use tool that calculates swine production costs and serves as a management tool in commercial properties. Abstract This paper aims to present a tool that offers pig producers a standard method to calculate and control their production costs and, consequently, provides the necessary information to guide strategic decision-making. Following these premises, a mathematical model to estimate swine production costs were developed using Microsoft Excel® software (version 2207). Case studies were used to assist in the characterization and construction of the model. Through the panel method, the tool was validated by professionals in the sector. Costs were considered according to the Neoclassical Economic Theory of Costs and allocated in the order of variable costs, fixed operating costs, and opportunity costs of capital and land. These costs together create the total cost. The model provides the total cost per batch, per market pig, per arroba, and per kilogram, which facilitates the interpretation of the results and economic evaluations of the system. The model is adaptable to different types of swine farming, as well as the consideration of all costs involved in the production system, whether explicit or implicit. The model developed has the potential to be used as a management tool in commercial swine production systems, assisting the producer in the decision-making process through the management and control of production costs.
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Affiliation(s)
- Laya Kannan Silva Alves
- Laboratory of Swine Research, Department of Animal Nutrition and Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Pirassununga 13635-900, Brazil
- Correspondence:
| | - Augusto Hauber Gameiro
- Laboratory of Socioeconomic Analysis and Animal Science, Department of Animal Nutrition and Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Pirassununga 13635-900, Brazil
| | - Allan Paul Schinckel
- Department of Animal Sciences, College of Agriculture, Purdue University, West Lafayette, IN 47907, USA
| | - Cesar Augusto Pospissil Garbossa
- Laboratory of Swine Research, Department of Animal Nutrition and Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Pirassununga 13635-900, Brazil
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Wang S, Jiang H, Qiao Y, Jiang S, Lin H, Sun Q. The Research Progress of Vision-Based Artificial Intelligence in Smart Pig Farming. SENSORS (BASEL, SWITZERLAND) 2022; 22:s22176541. [PMID: 36080994 PMCID: PMC9460267 DOI: 10.3390/s22176541] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 08/22/2022] [Accepted: 08/27/2022] [Indexed: 05/05/2023]
Abstract
Pork accounts for an important proportion of livestock products. For pig farming, a lot of manpower, material resources and time are required to monitor pig health and welfare. As the number of pigs in farming increases, the continued use of traditional monitoring methods may cause stress and harm to pigs and farmers and affect pig health and welfare as well as farming economic output. In addition, the application of artificial intelligence has become a core part of smart pig farming. The precision pig farming system uses sensors such as cameras and radio frequency identification to monitor biometric information such as pig sound and pig behavior in real-time and convert them into key indicators of pig health and welfare. By analyzing the key indicators, problems in pig health and welfare can be detected early, and timely intervention and treatment can be provided, which helps to improve the production and economic efficiency of pig farming. This paper studies more than 150 papers on precision pig farming and summarizes and evaluates the application of artificial intelligence technologies to pig detection, tracking, behavior recognition and sound recognition. Finally, we summarize and discuss the opportunities and challenges of precision pig farming.
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Affiliation(s)
- Shunli Wang
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China
| | - Honghua Jiang
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China
| | - Yongliang Qiao
- Australian Centre for Field Robotics (ACFR), Faculty of Engineering, The University of Sydney, Sydney, NSW 2006, Australia
- Correspondence:
| | - Shuzhen Jiang
- College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Tai’an 271018, China
| | - Huaiqin Lin
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China
| | - Qian Sun
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China
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Nielsen SS, Alvarez J, Bicout DJ, Calistri P, Canali E, Drewe JA, Garin‐Bastuji B, Gonzales Rojas JL, Schmidt G, Herskin M, Michel V, Miranda Chueca MÁ, Mosbach‐Schulz O, Padalino B, Roberts HC, Stahl K, Velarde A, Viltrop A, Winckler C, Edwards S, Ivanova S, Leeb C, Wechsler B, Fabris C, Lima E, Mosbach‐Schulz O, Van der Stede Y, Vitali M, Spoolder H. Welfare of pigs on farm. EFSA J 2022; 20:e07421. [PMID: 36034323 PMCID: PMC9405538 DOI: 10.2903/j.efsa.2022.7421] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
This scientific opinion focuses on the welfare of pigs on farm, and is based on literature and expert opinion. All pig categories were assessed: gilts and dry sows, farrowing and lactating sows, suckling piglets, weaners, rearing pigs and boars. The most relevant husbandry systems used in Europe are described. For each system, highly relevant welfare consequences were identified, as well as related animal-based measures (ABMs), and hazards leading to the welfare consequences. Moreover, measures to prevent or correct the hazards and/or mitigate the welfare consequences are recommended. Recommendations are also provided on quantitative or qualitative criteria to answer specific questions on the welfare of pigs related to tail biting and related to the European Citizen's Initiative 'End the Cage Age'. For example, the AHAW Panel recommends how to mitigate group stress when dry sows and gilts are grouped immediately after weaning or in early pregnancy. Results of a comparative qualitative assessment suggested that long-stemmed or long-cut straw, hay or haylage is the most suitable material for nest-building. A period of time will be needed for staff and animals to adapt to housing lactating sows and their piglets in farrowing pens (as opposed to crates) before achieving stable welfare outcomes. The panel recommends a minimum available space to the lactating sow to ensure piglet welfare (measured by live-born piglet mortality). Among the main risk factors for tail biting are space allowance, types of flooring, air quality, health status and diet composition, while weaning age was not associated directly with tail biting in later life. The relationship between the availability of space and growth rate, lying behaviour and tail biting in rearing pigs is quantified and presented. Finally, the panel suggests a set of ABMs to use at slaughter for monitoring on-farm welfare of cull sows and rearing pigs.
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Tuyttens FAM, Molento CFM, Benaissa S. Twelve Threats of Precision Livestock Farming (PLF) for Animal Welfare. Front Vet Sci 2022; 9:889623. [PMID: 35692299 PMCID: PMC9186058 DOI: 10.3389/fvets.2022.889623] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Accepted: 05/09/2022] [Indexed: 12/23/2022] Open
Abstract
Research and development of Precision Livestock Farming (PLF) is booming, partly due to hopes and claims regarding the benefits of PLF for animal welfare. These claims remain largely unproven, however, as only few PLF technologies focusing on animal welfare have been commercialized and adopted in practice. The prevailing enthusiasm and optimism about PLF innovations may be clouding the perception of possible threats that PLF may pose to farm animal welfare. Without claiming to be exhaustive, this paper lists 12 potential threats grouped into four categories: direct harm, indirect harm via the end-user, via changes to housing and management, and via ethical stagnation or degradation. PLF can directly harm the animals because of (1) technical failures, (2) harmful effects of exposure, adaptation or wearing of hardware components, (3) inaccurate predictions and decisions due to poor external validation, and (4) lack of uptake of the most meaningful indicators for animal welfare. PLF may create indirect effects on animal welfare if the farmer or stockperson (5) becomes under- or over-reliant on PLF technology, (6) spends less (quality) time with the animals, and (7) loses animal-oriented husbandry skills. PLF may also compromise the interests of the animals by creating transformations in animal farming so that the housing and management are (8) adapted to optimize PLF performance or (9) become more industrialized. Finally, PLF may affect the moral status of farm animals in society by leading to (10) increased speciesism, (11) further animal instrumentalization, and (12) increased animal consumption and harm. For the direct threats, possibilities for prevention and remedies are suggested. As the direction and magnitude of the more indirect threats are harder to predict or prevent, they are more difficult to address. In order to maximize the potential of PLF for improving animal welfare, the potential threats as well as the opportunities should be acknowledged, monitored and addressed.
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Affiliation(s)
- Frank A. M. Tuyttens
- Flanders Research Institute for Agriculture, Fisheries and Food (ILVO), Merelbeke, Belgium
- Department of Veterinary and Biosciences, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium
- *Correspondence: Frank A. M. Tuyttens
| | | | - Said Benaissa
- Flanders Research Institute for Agriculture, Fisheries and Food (ILVO), Merelbeke, Belgium
- Department of Information Technology, Ghent University/imec, Ghent, Belgium
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Fang C, Zheng H, Yang J, Deng H, Zhang T. Study on Poultry Pose Estimation Based on Multi-Parts Detection. Animals (Basel) 2022; 12:ani12101322. [PMID: 35625168 PMCID: PMC9137532 DOI: 10.3390/ani12101322] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Revised: 05/15/2022] [Accepted: 05/19/2022] [Indexed: 11/22/2022] Open
Abstract
Simple Summary Poultry farming is an important part of China’s agriculture system. The automatic estimation of poultry posture can help to analyze the movement, behavior, and even health of poultry. In this study, a poultry pose-estimation system was designed, which realized the automatic pose estimation of a single broiler chicken using a multi-part detection method. The experimental results show that this method can obtain better pose-estimation results for a single broiler chicken with respect to precision, recall, and F1 score. The pose-estimation system designed in this study provides a new means to provide help for poultry pose/behavior researchers in the future. Abstract Poultry pose estimation is a prerequisite for evaluating abnormal behavior and disease prediction in poultry. Accurate pose-estimation enables poultry producers to better manage their poultry. Because chickens are group-fed, how to achieve automatic poultry pose recognition has become a problematic point for accurate monitoring in large-scale farms. To this end, based on computer vision technology, this paper uses a deep neural network (DNN) technique to estimate the posture of a single broiler chicken. This method compared the pose detection results with the Single Shot MultiBox Detector (SSD) algorithm, You Only Look Once (YOLOV3) algorithm, RetinaNet algorithm, and Faster_R-CNN algorithm. Preliminary tests show that the method proposed in this paper achieves a 0.0128 standard deviation of precision and 0.9218 ± 0.0048 of confidence (95%) and a 0.0266 standard deviation of recall and 0.8996 ± 0.0099 of confidence (95%). By successfully estimating the pose of broiler chickens, it is possible to facilitate the detection of abnormal behavior of poultry. Furthermore, the method can be further improved to increase the overall success rate of verification.
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Affiliation(s)
- Cheng Fang
- College of Engineering, South China Agricultural University, 483 Wushan Road, Guangzhou 510642, China; (C.F.); (H.Z.); (J.Y.); (H.D.)
| | - Haikun Zheng
- College of Engineering, South China Agricultural University, 483 Wushan Road, Guangzhou 510642, China; (C.F.); (H.Z.); (J.Y.); (H.D.)
| | - Jikang Yang
- College of Engineering, South China Agricultural University, 483 Wushan Road, Guangzhou 510642, China; (C.F.); (H.Z.); (J.Y.); (H.D.)
| | - Hongfeng Deng
- College of Engineering, South China Agricultural University, 483 Wushan Road, Guangzhou 510642, China; (C.F.); (H.Z.); (J.Y.); (H.D.)
| | - Tiemin Zhang
- College of Engineering, South China Agricultural University, 483 Wushan Road, Guangzhou 510642, China; (C.F.); (H.Z.); (J.Y.); (H.D.)
- National Engineering Research Center for Breeding Swine Industry, Guangzhou 510642, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou 510642, China
- Correspondence:
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30
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Systematic review of animal-based indicators to measure thermal, social, and immune-related stress in pigs. PLoS One 2022; 17:e0266524. [PMID: 35511825 PMCID: PMC9070874 DOI: 10.1371/journal.pone.0266524] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2021] [Accepted: 03/22/2022] [Indexed: 11/19/2022] Open
Abstract
The intense nature of pig production has increased the animals’ exposure to stressful conditions, which may be detrimental to their welfare and productivity. Some of the most common sources of stress in pigs are extreme thermal conditions (thermal stress), density and mixing during housing (social stress), or exposure to pathogens and other microorganisms that may challenge their immune system (immune-related stress). The stress response can be monitored based on the animals’ coping mechanisms, as a result of specific environmental, social, and health conditions. These animal-based indicators may support decision making to maintain animal welfare and productivity. The present study aimed to systematically review animal-based indicators of social, thermal, and immune-related stresses in farmed pigs, and the methods used to monitor them. Peer-reviewed scientific literature related to pig production was collected using three online search engines: ScienceDirect, Scopus, and PubMed. The manuscripts selected were grouped based on the indicators measured during the study. According to our results, body temperature measured with a rectal thermometer was the most commonly utilized method for the evaluation of thermal stress in pigs (87.62%), as described in 144 studies. Of the 197 studies that evaluated social stress, aggressive behavior was the most frequently-used indicator (81.81%). Of the 535 publications examined regarding immune-related stress, cytokine concentration in blood samples was the most widely used indicator (80.1%). Information about the methods used to measure animal-based indicators is discussed in terms of validity, reliability, and feasibility. Additionally, the introduction and wide spreading of alternative, less invasive methods with which to measure animal-based indicators, such as cortisol in saliva, skin temperature and respiratory rate via infrared thermography, and various animal welfare threats via vocalization analysis are highlighted. The information reviewed was used to discuss the feasible and most reliable methods with which to monitor the impact of relevant stressors commonly presented by intense production systems on the welfare of farmed pigs.
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Menendez HM, Brennan JR, Gaillard C, Ehlert K, Quintana J, Neethirajan S, Remus A, Jacobs M, Teixeira IAMA, Turner BL, Tedeschi LO. ASAS-NANP SYMPOSIUM: MATHEMATICAL MODELING IN ANIMAL NUTRITION: Opportunities and Challenges of Confined and Extensive Precision Livestock Production. J Anim Sci 2022; 100:6577180. [PMID: 35511692 PMCID: PMC9171331 DOI: 10.1093/jas/skac160] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2022] [Accepted: 04/28/2022] [Indexed: 11/18/2022] Open
Abstract
Modern animal scientists, industry, and managers have never faced a more complex world. Precision livestock technologies have altered management in confined operations to meet production, environmental, and consumer goals. Applications of precision technologies have been limited in extensive systems such as rangelands due to lack of infrastructure, electrical power, communication, and durability. However, advancements in technology have helped to overcome many of these challenges. Investment in precision technologies is growing within the livestock sector, requiring the need to assess opportunities and challenges associated with implementation to enhance livestock production systems. In this review, precision livestock farming and digital livestock farming are explained in the context of a logical and iterative five-step process to successfully integrate precision livestock measurement and management tools, emphasizing the need for precision system models (PSMs). This five-step process acts as a guide to realize anticipated benefits from precision technologies and avoid unintended consequences. Consequently, the synthesis of precision livestock and modeling examples and key case studies help highlight past challenges and current opportunities within confined and extensive systems. Successfully developing PSM requires appropriate model(s) selection that aligns with desired management goals and precision technology capabilities. Therefore, it is imperative to consider the entire system to ensure that precision technology integration achieves desired goals while remaining economically and managerially sustainable. Achieving long-term success using precision technology requires the next generation of animal scientists to obtain additional skills to keep up with the rapid pace of technology innovation. Building workforce capacity and synergistic relationships between research, industry, and managers will be critical. As the process of precision technology adoption continues in more challenging and harsh, extensive systems, it is likely that confined operations will benefit from required advances in precision technology and PSMs, ultimately strengthening the benefits from precision technology to achieve short- and long-term goals.
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Affiliation(s)
- H M Menendez
- Department of Animal Science (Menendez, Brennan, Quintana); Department of Natural Resource Management (Ehlert); South Dakota State University, 711 N. Creek Drive, Rapid City, South Dakota, 57702, USA
| | - J R Brennan
- Department of Animal Science (Menendez, Brennan, Quintana); Department of Natural Resource Management (Ehlert); South Dakota State University, 711 N. Creek Drive, Rapid City, South Dakota, 57702, USA
| | - C Gaillard
- Institut Agro, PEGASE, INRAE, 35590 Saint Gilles, France
| | - K Ehlert
- Department of Animal Science (Menendez, Brennan, Quintana); Department of Natural Resource Management (Ehlert); South Dakota State University, 711 N. Creek Drive, Rapid City, South Dakota, 57702, USA
| | - J Quintana
- Department of Animal Science (Menendez, Brennan, Quintana); Department of Natural Resource Management (Ehlert); South Dakota State University, 711 N. Creek Drive, Rapid City, South Dakota, 57702, USA
| | - Suresh Neethirajan
- Farmworx, Adaptation Physiology, Animal Sciences Group, Wageningen University, 6700 AH, The Netherlands
| | - A Remus
- Sherbrooke Research and Development Centre, 2000 College Street, Sherbrooke, QC J1M 1Z3, Canada
| | - M Jacobs
- FR Analytics B.V., 7642 AP Wierden, The Netherlands
| | - I A M A Teixeira
- Department of Animal, Veterinary, and Food Sciences, University of Idaho, Twin Falls, ID 83301, USA
| | - B L Turner
- Department of Agriculture, Agribusiness, and Environmental Science, and King Ranch® Institute for Ranch Management, Texas A&M University-Kingsville, 700 University Blvd MSC 228, Kingsville, TX 78363, USA
| | - L O Tedeschi
- Department of Animal Science, Texas A&M University, College Station, TX 77843-2471, USA
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Chen CPJ, Morota G, Lee K, Zhang Z, Cheng H. VTag: a Semi-Supervised Pipeline for Tracking Pig Activity with a Single Top-View Camera. J Anim Sci 2022; 100:6576119. [PMID: 35486674 PMCID: PMC9169988 DOI: 10.1093/jas/skac147] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Accepted: 04/26/2022] [Indexed: 11/13/2022] Open
Abstract
Precision livestock farming has become an important research focus with the rising demand of meat production in the swine industry. Currently, the farming practice is widely conducted by the technology of computer vision (CV), which automates monitoring pig activity solely based on video recordings. Automation is fulfilled by deriving imagery features that can guide CV systems to recognize animals' body contours, positions, and behavioral categories. Nevertheless, the performance of the CV systems is sensitive to the quality of imagery features. When the CV system is deployed in a variable environment, its performance may decrease as the features are not generalized enough under different illumination conditions. Moreover, most CV systems are established by supervised learning, in which intensive effort in labeling ground truths for the training process is required. Hence, a semi-supervised pipeline, VTag, is developed in this study. The pipeline focuses on long-term tracking of pig activity without requesting any pre-labeled video but a few human supervisions to build a CV system. The pipeline can be rapidly deployed as only one top-view RGB camera is needed for the tracking task. Additionally, the pipeline was released as a software tool with a friendly graphical interface available to general users. Among the presented datasets, the average tracking error was 17.99 centimeters. Besides, with the prediction results, the pig moving distance per unit time can be estimated for activity studies. Lastly, as the motion is monitored, a heat map showing spatial hot spots visited by the pigs can be useful guidance for farming management. The presented pipeline saves massive laborious work in preparing training dataset. The rapid deployment of the tracking system paves the way for pig behavior monitoring.
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Affiliation(s)
- Chun-Peng J Chen
- Department of Animal Science, University of California, Davis, CA, USA
| | - Gota Morota
- Department of Animal and Poultry Sciences, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA.,Center for Advanced Innovation in Agriculture, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA
| | - Kiho Lee
- Division of Animal Sciences, University of Missouri, Columbia, MO, USA
| | - Zhiwu Zhang
- Department of Crop and Soil Sciences, Washington State University, Pullman, WA, USA
| | - Hao Cheng
- Department of Animal Science, University of California, Davis, CA, USA
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Collins LM, Smith LM. Review: Smart agri-systems for the pig industry. Animal 2022; 16 Suppl 2:100518. [PMID: 35469753 DOI: 10.1016/j.animal.2022.100518] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Revised: 03/15/2022] [Accepted: 03/17/2022] [Indexed: 11/01/2022] Open
Abstract
The projected rise in the global human population and the anticipated increase in demand for meat and animal products, albeit with a greatly reduced environmental footprint, offers a difficult set of challenges to the livestock sector. Primarily, how do we produce more, but in a way that is healthier for the animals, public, and the environment? Implementing a smart agri-systems approach, utilising multiplatform precision technologies, internet of things, data analytics, machine learning, digital twinning and other emerging technologies can support a more informed decision-making and forecasting position that will allow us to move towards greater sustainability in future. If we look to precision agronomy, there are a wide range of technologies available and examples of how digitalisation and integration of platform outputs can lead to advances in understanding the agricultural system and forecasting upcoming events and performance that have hitherto been impossible to achieve. There is much for the livestock sector and animal scientists to learn from the developments of precision technologies and smart agri-system approaches in the arable and horticultural contexts. However, there are several barriers the livestock sector must overcome: (i) the development and implementation of precision livestock farming technologies that can be easily integrated and analysed without the support of a dedicated data analyst in house; (ii) the lack of extensive validation of many developed and available precision livestock farming technologies means that reliability and accuracy are likely to be compromised when applied in commercial practice; (iii) the best smart agri-systems approaches are reliant on large quantities of data from across a wide variety of conditions, but at present the complications of data sharing, commercial sensitivities, data ownership, and permissions make it challenging to obtain or knit together data from different parts of the system into a comprehensive picture; and (iv) the high level of investment needed to develop and scale these technologies is substantial and represents significant risk for companies when a technology is emerging. Using a case study of the National Pig Centre (a flagship pig research facility in the UK) we discuss how a smart agri-systems approach can be applied in practice to investigate alternative future systems for production, and enable monitoring of these systems as a commercial demonstrator site for future pork production.
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Affiliation(s)
- L M Collins
- Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom.
| | - L M Smith
- Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom
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34
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Applications of Smart Technology as a Sustainable Strategy in Modern Swine Farming. SUSTAINABILITY 2022. [DOI: 10.3390/su14052607] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The size of the pork market is increasing globally to meet the demand for animal protein, resulting in greater farm size for swine and creating a great challenge to swine farmers and industry owners in monitoring the farm activities and the health and behavior of the herd of swine. In addition, the growth of swine production is resulting in a changing climate pattern along with the environment, animal welfare, and human health issues, such as antimicrobial resistance, zoonosis, etc. The profit of swine farms depends on the optimum growth and good health of swine, while modern farming practices can ensure healthy swine production. To solve these issues, a future strategy should be considered with information and communication technology (ICT)-based smart swine farming, considering auto-identification, remote monitoring, feeding behavior, animal rights/welfare, zoonotic diseases, nutrition and food quality, labor management, farm operations, etc., with a view to improving meat production from the swine industry. Presently, swine farming is not only focused on the development of infrastructure but is also occupied with the application of technological knowledge for designing feeding programs, monitoring health and welfare, and the reproduction of the herd. ICT-based smart technologies, including smart ear tags, smart sensors, the Internet of Things (IoT), deep learning, big data, and robotics systems, can take part directly in the operation of farm activities, and have been proven to be effective tools for collecting, processing, and analyzing data from farms. In this review, which considers the beneficial role of smart technologies in swine farming, we suggest that smart technologies should be applied in the swine industry. Thus, the future swine industry should be automated, considering sustainability and productivity.
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Bai X, Plastow GS. Breeding for disease resilience: opportunities to manage polymicrobial challenge and improve commercial performance in the pig industry. CABI AGRICULTURE AND BIOSCIENCE 2022; 3:6. [PMID: 35072100 PMCID: PMC8761052 DOI: 10.1186/s43170-022-00073-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Accepted: 01/06/2022] [Indexed: 05/31/2023]
Abstract
Disease resilience, defined as an animal's ability to maintain productive performance in the face of infection, provides opportunities to manage the polymicrobial challenge common in pig production. Disease resilience can deliver a number of benefits, including more sustainable production as well as improved animal health and the potential for reduced antimicrobial use. However, little progress has been made to date in the application of disease resilience in breeding programs due to a number of factors, including (1) confusion around definitions of disease resilience and its component traits disease resistance and tolerance, and (2) the difficulty in characterizing such a complex trait consisting of multiple biological functions and dynamic elements of rates of response and recovery from infection. Accordingly, this review refines the definitions of disease resistance, tolerance, and resilience based on previous studies to help improve the understanding and application of these breeding goals and traits under different scenarios. We also describe and summarize results from a "natural disease challenge model" designed to provide inputs for selection of disease resilience. The next steps for managing polymicrobial challenges faced by the pig industry will include the development of large-scale multi-omics data, new phenotyping technologies, and mathematical and statistical methods adapted to these data. Genome editing to produce pigs resistant to major diseases may complement selection for disease resilience along with continued efforts in the more traditional areas of biosecurity, vaccination and treatment. Altogether genomic approaches provide exciting opportunities for the pig industry to overcome the challenges provided by hard-to-manage diseases as well as new environmental challenges associated with climate change.
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Affiliation(s)
- Xuechun Bai
- Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB Canada
| | - Graham S. Plastow
- Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB Canada
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Bhujel A, Arulmozhi E, Moon BE, Kim HT. Deep-Learning-Based Automatic Monitoring of Pigs' Physico-Temporal Activities at Different Greenhouse Gas Concentrations. Animals (Basel) 2021; 11:3089. [PMID: 34827821 PMCID: PMC8614322 DOI: 10.3390/ani11113089] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Revised: 10/27/2021] [Accepted: 10/28/2021] [Indexed: 12/29/2022] Open
Abstract
Pig behavior is an integral part of health and welfare management, as pigs usually reflect their inner emotions through behavior change. The livestock environment plays a key role in pigs' health and wellbeing. A poor farm environment increases the toxic GHGs, which might deteriorate pigs' health and welfare. In this study a computer-vision-based automatic monitoring and tracking model was proposed to detect pigs' short-term physical activities in the compromised environment. The ventilators of the livestock barn were closed for an hour, three times in a day (07:00-08:00, 13:00-14:00, and 20:00-21:00) to create a compromised environment, which increases the GHGs level significantly. The corresponding pig activities were observed before, during, and after an hour of the treatment. Two widely used object detection models (YOLOv4 and Faster R-CNN) were trained and compared their performances in terms of pig localization and posture detection. The YOLOv4, which outperformed the Faster R-CNN model, was coupled with a Deep-SORT tracking algorithm to detect and track the pig activities. The results revealed that the pigs became more inactive with the increase in GHG concentration, reducing their standing and walking activities. Moreover, the pigs shortened their sternal-lying posture, increasing the lateral lying posture duration at higher GHG concentration. The high detection accuracy (mAP: 98.67%) and tracking accuracy (MOTA: 93.86% and MOTP: 82.41%) signify the models' efficacy in the monitoring and tracking of pigs' physical activities non-invasively.
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Affiliation(s)
- Anil Bhujel
- Department of Biosystems Engineering, Institute of Smart Farm, Gyeongsang National University, Jinju 52828, Korea; (A.B.); (E.A.)
- Ministry of Communication and Information Technology, Singha Durbar, Kathmandu 44600, Nepal
| | - Elanchezhian Arulmozhi
- Department of Biosystems Engineering, Institute of Smart Farm, Gyeongsang National University, Jinju 52828, Korea; (A.B.); (E.A.)
| | - Byeong-Eun Moon
- Smart Farm Research Center, Gyeongsang National University, Jinju 52828, Korea;
| | - Hyeon-Tae Kim
- Department of Biosystems Engineering, Institute of Smart Farm, Gyeongsang National University, Jinju 52828, Korea; (A.B.); (E.A.)
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D’Eath RB, Foister S, Jack M, Bowers N, Zhu Q, Barclay D, Baxter EM. Changes in tail posture detected by a 3D machine vision system are associated with injury from damaging behaviours and ill health on commercial pig farms. PLoS One 2021; 16:e0258895. [PMID: 34710143 PMCID: PMC8553069 DOI: 10.1371/journal.pone.0258895] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2021] [Accepted: 10/07/2021] [Indexed: 11/20/2022] Open
Abstract
To establish whether pig tail posture is affected by injuries and ill health, a machine vision system using 3D cameras to measure tail angle was used. Camera data from 1692 pigs in 41 production batches of 42.4 (±16.6) days in length over 17 months at seven diverse grower/finisher commercial pig farms, was validated by visiting farms every 14(±10) days to score injury and ill health. Linear modelling of tail posture found considerable farm and batch effects. The percentage of tails held low (0°) or mid (1-45°) decreased over time from 54.9% and 23.8% respectively by -0.16 and -0.05%/day, while tails high (45-90°) increased from 21.5% by 0.20%/day. Although 22% of scored pigs had scratched tails, severe tail biting was rare; only 6% had tail wounds and 5% partial tail loss. Adding tail injury to models showed associations with tail posture: overall tail injury, worsening tail injury, and tail loss were associated with more pigs detected with low tail posture and fewer with high tails. Minor tail injuries and tail swelling were also associated with altered tail posture. Unexpectedly, other health and injury scores had a larger effect on tail posture- more low tails were observed when a greater proportion of pigs in a pen were scored with lameness or lesions caused by social aggression. Ear injuries were linked with reduced high tails. These findings are consistent with the idea that low tail posture could be a general indicator of poor welfare. However, effects of flank biting and ocular discharge on tail posture were not consistent with this. Our results show for the first time that perturbations in the normal time trends of tail posture are associated with tail biting and other signs of adverse health/welfare at diverse commercial farms, forming the basis for a decision support system.
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Affiliation(s)
| | - Simone Foister
- Innovent Technology Ltd, Turriff, Aberdeenshire, United Kingdom
| | - Mhairi Jack
- Animal Behaviour & Welfare, SRUC, Edinburgh, United Kingdom
| | - Nicola Bowers
- Garth Pig Practice Ltd, Driffield, Yorkshire, United Kingdom
| | - Qiming Zhu
- Innovent Technology Ltd, Turriff, Aberdeenshire, United Kingdom
| | - David Barclay
- Innovent Technology Ltd, Turriff, Aberdeenshire, United Kingdom
| | - Emma M. Baxter
- Animal Behaviour & Welfare, SRUC, Edinburgh, United Kingdom
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Pandey S, Kalwa U, Kong T, Guo B, Gauger PC, Peters DJ, Yoon KJ. Behavioral Monitoring Tool for Pig Farmers: Ear Tag Sensors, Machine Intelligence, and Technology Adoption Roadmap. Animals (Basel) 2021; 11:2665. [PMID: 34573631 PMCID: PMC8466302 DOI: 10.3390/ani11092665] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2021] [Revised: 09/07/2021] [Accepted: 09/07/2021] [Indexed: 02/05/2023] Open
Abstract
Precision swine production can benefit from autonomous, noninvasive, and affordable devices that conduct frequent checks on the well-being status of pigs. Here, we present a remote monitoring tool for the objective measurement of some behavioral indicators that may help in assessing the health and welfare status-namely, posture, gait, vocalization, and external temperature. The multiparameter electronic sensor board is characterized by laboratory measurements and by animal tests. Relevant behavioral health indicators are discussed for implementing machine learning algorithms and decision support tools to detect animal lameness, lethargy, pain, injury, and distress. The roadmap for technology adoption is also discussed, along with challenges and the path forward. The presented technology can potentially lead to efficient management of farm animals, targeted focus on sick animals, medical cost savings, and less use of antibiotics.
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Affiliation(s)
- Santosh Pandey
- Department of Electrical and Computer Engineering, Iowa State University, Ames, IA 50011, USA;
| | - Upender Kalwa
- Department of Electrical and Computer Engineering, Iowa State University, Ames, IA 50011, USA;
| | - Taejoon Kong
- Center for Defense Acquisition and Requirements Analysis, Korea Institute for Defense Analyses, 37 Hoegi-ro, Dongdaemun-gu, Seoul 02455, Korea;
| | - Baoqing Guo
- Department of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, Ames, IA 50011, USA; (B.G.); (P.C.G.)
| | - Phillip C. Gauger
- Department of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, Ames, IA 50011, USA; (B.G.); (P.C.G.)
| | - David J. Peters
- Rural Sociology, Department of Sociology and Criminal Justice, Iowa State University, Ames, IA 50011, USA;
| | - Kyoung-Jin Yoon
- Department of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, Ames, IA 50011, USA; (B.G.); (P.C.G.)
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Effects of the environment and animal behavior on nutrient requirements for gestating sows: Future improvements in precision feeding. Anim Feed Sci Technol 2021. [DOI: 10.1016/j.anifeedsci.2021.115034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Guzhva O, Siegford JM, Lunner Kolstrup C. The Hitchhiker's Guide to Integration of Social and Ethical Awareness in Precision Livestock Farming Research. FRONTIERS IN ANIMAL SCIENCE 2021. [DOI: 10.3389/fanim.2021.725710] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
While fully automated livestock production may be considered the ultimate goal for optimising productivity at the farm level, the benefits and costs of such a development at the scale at which it needs to be implemented must also be considered from social and ethical perspectives. Automation resulting from Precision Livestock Farming (PLF) could alter fundamental views of human-animal interactions on farm and, even further, potentially compromise human and animal welfare and health if PLF development does not include a flexible, holistic strategy for integration. To investigate topic segregation, inclusion of socio-ethical aspects, and consideration of human-animal interactions within the PLF research field, the abstracts from 644 peer-reviewed publications were analysed using the recent advances in the Natural Language Processing (NLP). Two Latent Dirichlet Allocation (LDA) probabilistic models with varying number of topics (13 and 3 for Model 1 and Model 2, respectively) were implemented to create a generalised research topic overview. The visual representation of topics produced by LDA Model 1 and Model 2 revealed prominent similarities in the terms contributing to each topic, with only weight for each term being different. The majority of terms for both models were process-oriented, obscuring the inclusion of social and ethical angles in PLF publications. A subset of articles (5%, n = 32) was randomly selected for manual examination of the full text to evaluate whether abstract text and focus reflected that of the article as a whole. Few of these articles (12.5%, n = 4) focused specifically on broader ethical or societal considerations of PLF or (9.4%, n = 3) discussed PLF with respect to human-animal interactions. While there was consideration of the impact of PLF on animal welfare and farmers in nearly half of the full texts examined (46.9%, n = 15), this was often limited to a few statements in passing. Further, these statements were typically general rather than specific and presented PLF as beneficial to human users and animal recipients. To develop PLF that is in keeping with the ethical values and societal concerns of the public and consumers, projects, and publications that deliberately combine social context with technological processes and results are needed.
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The Application of Cameras in Precision Pig Farming: An Overview for Swine-Keeping Professionals. Animals (Basel) 2021; 11:ani11082343. [PMID: 34438800 PMCID: PMC8388688 DOI: 10.3390/ani11082343] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Revised: 07/19/2021] [Accepted: 08/06/2021] [Indexed: 01/06/2023] Open
Abstract
Simple Summary The preeminent purpose of precision livestock farming (PLF) is to provide affordable and straightforward solutions to severe problems with certainty. Some data collection techniques in PLF such as RFID are accurate but not affordable for small- and medium-sized farms. On the other hand, camera sensors are cheap, commonly available, and easily used to collect information compared to other sensor systems in precision pig farming. Cameras have ample chance to monitor pigs with high precision at an affordable cost. However, the lack of targeted information about the application of cameras in the pig industry is a shortcoming for swine farmers and researchers. This review describes the state of the art in 3D imaging systems (i.e., depth sensors and time-of-flight cameras), along with 2D cameras, for effectively identifying pig behaviors, and presents automated approaches for monitoring and investigating pigs’ feeding, drinking, lying, locomotion, aggressive, and reproductive behaviors. In addition, the review summarizes the related literature and points out limitations to open up new dimensions for future researchers to explore. Abstract Pork is the meat with the second-largest overall consumption, and chicken, pork, and beef together account for 92% of global meat production. Therefore, it is necessary to adopt more progressive methodologies such as precision livestock farming (PLF) rather than conventional methods to improve production. In recent years, image-based studies have become an efficient solution in various fields such as navigation for unmanned vehicles, human–machine-based systems, agricultural surveying, livestock, etc. So far, several studies have been conducted to identify, track, and classify the behaviors of pigs and achieve early detection of disease, using 2D/3D cameras. This review describes the state of the art in 3D imaging systems (i.e., depth sensors and time-of-flight cameras), along with 2D cameras, for effectively identifying pig behaviors and presents automated approaches for the monitoring and investigation of pigs’ feeding, drinking, lying, locomotion, aggressive, and reproductive behaviors.
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Precision Agriculture for Crop and Livestock Farming-Brief Review. Animals (Basel) 2021; 11:ani11082345. [PMID: 34438802 PMCID: PMC8388655 DOI: 10.3390/ani11082345] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Revised: 07/31/2021] [Accepted: 08/05/2021] [Indexed: 11/17/2022] Open
Abstract
In the last few decades, agriculture has played an important role in the worldwide economy. The need to produce more food for a rapidly growing population is creating pressure on crop and animal production and a negative impact to the environment. On the other hand, smart farming technologies are becoming increasingly common in modern agriculture to assist in optimizing agricultural and livestock production and minimizing the wastes and costs. Precision agriculture (PA) is a technology-enabled, data-driven approach to farming management that observes, measures, and analyzes the needs of individual fields and crops. Precision livestock farming (PLF), relying on the automatic monitoring of individual animals, is used for animal growth, milk production, and the detection of diseases as well as to monitor animal behavior and their physical environment, among others. This study aims to briefly review recent scientific and technological trends in PA and their application in crop and livestock farming, serving as a simple research guide for the researcher and farmer in the application of technology to agriculture. The development and operation of PA applications involve several steps and techniques that need to be investigated further to make the developed systems accurate and implementable in commercial environments.
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Williams M, Davis CN, Jones DL, Davies ES, Vasina P, Cutress D, Rose MT, Jones RA, Williams HW. Lying behaviour of housed and outdoor-managed pregnant sheep. Appl Anim Behav Sci 2021. [DOI: 10.1016/j.applanim.2021.105370] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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Gómez Y, Stygar AH, Boumans IJMM, Bokkers EAM, Pedersen LJ, Niemi JK, Pastell M, Manteca X, Llonch P. A Systematic Review on Validated Precision Livestock Farming Technologies for Pig Production and Its Potential to Assess Animal Welfare. Front Vet Sci 2021; 8:660565. [PMID: 34055949 PMCID: PMC8160240 DOI: 10.3389/fvets.2021.660565] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 04/19/2021] [Indexed: 11/13/2022] Open
Abstract
Several precision livestock farming (PLF) technologies, conceived for optimizing farming processes, are developed to detect the physical and behavioral changes of animals continuously and in real-time. The aim of this review was to explore the capacity of existing PLF technologies to contribute to the assessment of pig welfare. In a web search for commercially available PLF for pigs, 83 technologies were identified. A literature search was conducted, following systematic review guidelines (PRISMA), to identify studies on the validation of sensor technologies for assessing animal-based welfare indicators. Two validation levels were defined: internal (evaluation during system building within the same population that were used for system building) and external (evaluation on a different population than during system building). From 2,463 articles found, 111 were selected, which validated some PLF that could be applied to the assessment of animal-based welfare indicators of pigs (7% classified as external, and 93% as internal validation). From our list of commercially available PLF technologies, only 5% had been externally validated. The more often validated technologies were vision-based solutions (n = 45), followed by load-cells (n = 28; feeders and drinkers, force plates and scales), accelerometers (n = 14) and microphones (n = 14), thermal cameras (n = 10), photoelectric sensors (n = 5), radio-frequency identification (RFID) for tracking (n = 2), infrared thermometers (n = 1), and pyrometer (n = 1). Externally validated technologies were photoelectric sensors (n = 2), thermal cameras (n = 2), microphone (n = 1), load-cells (n = 1), RFID (n = 1), and pyrometer (n = 1). Measured traits included activity and posture-related behavior, feeding and drinking, other behavior, physical condition, and health. In conclusion, existing PLF technologies are potential tools for on-farm animal welfare assessment in pig production. However, validation studies are lacking for an important percentage of market available tools, and in particular research and development need to focus on identifying the feature candidates of the measures (e.g., deviations from diurnal pattern, threshold levels) that are valid signals of either negative or positive animal welfare. An important gap identified are the lack of technologies to assess affective states (both positive and negative states).
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Affiliation(s)
- Yaneth Gómez
- Department of Animal and Food Science, Universitat Autònoma de Barcelona, Barcelona, Spain
| | - Anna H. Stygar
- Bioeconomy and Environment, Natural Resources Institute Finland (Luke), Helsinki, Finland
| | - Iris J. M. M. Boumans
- Animal Production Systems Group, Wageningen University and Research, Wageningen, Netherlands
| | - Eddie A. M. Bokkers
- Animal Production Systems Group, Wageningen University and Research, Wageningen, Netherlands
| | | | - Jarkko K. Niemi
- Bioeconomy and Environment, Natural Resources Institute Finland (Luke), Helsinki, Finland
| | - Matti Pastell
- Production Systems, Natural Resources Institute Finland (Luke), Helsinki, Finland
| | - Xavier Manteca
- Department of Animal and Food Science, Universitat Autònoma de Barcelona, Barcelona, Spain
| | - Pol Llonch
- Department of Animal and Food Science, Universitat Autònoma de Barcelona, Barcelona, Spain
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Schillings J, Bennett R, Rose DC. Exploring the Potential of Precision Livestock Farming Technologies to Help Address Farm Animal Welfare. FRONTIERS IN ANIMAL SCIENCE 2021. [DOI: 10.3389/fanim.2021.639678] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
The rise in the demand for animal products due to demographic and dietary changes has exacerbated difficulties in addressing societal concerns related to the environment, human health, and animal welfare. As a response to this challenge, Precision Livestock Farming (PLF) technologies are being developed to monitor animal health and welfare parameters in a continuous and automated way, offering the opportunity to improve productivity and detect health issues at an early stage. However, ethical concerns have been raised regarding their potential to facilitate the management of production systems that are potentially harmful to animal welfare, or to impact the human-animal relationship and farmers' duty of care. Using the Five Domains Model (FDM) as a framework, the aim is to explore the potential of PLF to help address animal welfare and to discuss potential welfare benefits and risks of using such technology. A variety of technologies are identified and classified according to their type [sensors, bolus, image or sound based, Radio Frequency Identification (RFID)], their development stage, the species they apply to, and their potential impact on welfare. While PLF technologies have promising potential to reduce the occurrence of diseases and injuries in livestock farming systems, their current ability to help promote positive welfare states remains limited, as technologies with such potential generally remain at earlier development stages. This is likely due to the lack of evidence related to the validity of positive welfare indicators as well as challenges in technology adoption and development. Finally, the extent to which welfare can be improved will also strongly depend on whether management practices will be adapted to minimize negative consequences and maximize benefits to welfare.
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Krampe C, Serratosa J, Niemi JK, Ingenbleek PTM. Consumer Perceptions of Precision Livestock Farming-A Qualitative Study in Three European Countries. Animals (Basel) 2021; 11:1221. [PMID: 33922691 PMCID: PMC8146409 DOI: 10.3390/ani11051221] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Revised: 04/12/2021] [Accepted: 04/22/2021] [Indexed: 12/31/2022] Open
Abstract
Scholars in the fields of animal science and technology have investigated how precision livestock farming (PLF) can contribute to the quality and efficiency of animal husbandry and to the health and welfare of farm animals. Although the results of such studies provide promising avenues for the development of PLF technologies and their potential for the application in animal husbandry, the perspectives of consumers with regard to PLF technologies have yet to be the subject of much investigation. To address this research gap, the current study explores consumer perceptions of PLF technologies within the pork and dairy value chains. The investigation is based on results from six focus group discussions conducted in three European countries, each reflecting a different market environment: Finland, the Netherlands and Spain. The results indicate that consumers expect the implementation of different PLF technologies to enhance the health and welfare of farm animals, while generating environmental improvements and increasing the transparency of value-chain processes. The analysis further reveals three over-arching consumer concerns: (1) the fear that the integration of PLF technologies will introduce more industrialisation into livestock farming production; (2) the concern that PLF technologies and data are vulnerable to misuse and cyber-crime; and (3) the concern that PLF information is not communicated adequately to allow informed purchase decisions. The research findings provide directions for members of the animal-based food value chain to make informed decisions to improve their sustainability, social responsibility and credibility by endorsing the acceptance of PLF (technologies) amongst European consumers.
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Affiliation(s)
- Caspar Krampe
- Marketing and Consumer Behaviour Group, Department of Social Science, Wageningen University and Research, Hollandseweg 1, 6706 KN Wageningen, The Netherlands;
| | - Jordi Serratosa
- Research Park Universitat Autònoma de Barcelona, Universitat Autònoma de Barcelona, Av. De Can Domènech, 08193 Bellaterra, Spain;
| | - Jarkko K. Niemi
- Bioeconomy and Environment, Natural Resource Institute Finland (Luke), Kampusranta 9, 60320 Seinäjoki, Finland;
| | - Paul T. M. Ingenbleek
- Marketing and Consumer Behaviour Group, Department of Social Science, Wageningen University and Research, Hollandseweg 1, 6706 KN Wageningen, The Netherlands;
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Racewicz P, Ludwiczak A, Skrzypczak E, Składanowska-Baryza J, Biesiada H, Nowak T, Nowaczewski S, Zaborowicz M, Stanisz M, Ślósarz P. Welfare Health and Productivity in Commercial Pig Herds. Animals (Basel) 2021; 11:1176. [PMID: 33924224 PMCID: PMC8074599 DOI: 10.3390/ani11041176] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Revised: 04/16/2021] [Accepted: 04/17/2021] [Indexed: 12/02/2022] Open
Abstract
In recent years, there have been very dynamic changes in both pork production and pig breeding technology around the world. The general trend of increasing the efficiency of pig production, with reduced employment, requires optimisation and a comprehensive approach to herd management. One of the most important elements on the way to achieving this goal is to maintain animal welfare and health. The health of the pigs on the farm is also a key aspect in production economics. The need to maintain a high health status of pig herds by eliminating the frequency of different disease units and reducing the need for antimicrobial substances is part of a broadly understood high potential herd management strategy. Thanks to the use of sensors (cameras, microphones, accelerometers, or radio-frequency identification transponders), the images, sounds, movements, and vital signs of animals are combined through algorithms and analysed for non-invasive monitoring of animals, which allows for early detection of diseases, improves their welfare, and increases the productivity of breeding. Automated, innovative early warning systems based on continuous monitoring of specific physiological (e.g., body temperature) and behavioural parameters can provide an alternative to direct diagnosis and visual assessment by the veterinarian or the herd keeper.
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Affiliation(s)
- Przemysław Racewicz
- Laboratory of Veterinary Public Health Protection, Department of Animal Breeding and Product Quality Assessment, Poznan University of Life Sciences, Słoneczna 1, 62-002 Suchy Las, Poland;
| | - Agnieszka Ludwiczak
- Department of Animal Breeding and Product Quality Assessment, Poznan University of Life Sciences, Słoneczna 1, 62-002 Suchy Las, Poland; (A.L.); (E.S.); (J.S.-B.); (S.N.); (M.S.); (P.Ś.)
| | - Ewa Skrzypczak
- Department of Animal Breeding and Product Quality Assessment, Poznan University of Life Sciences, Słoneczna 1, 62-002 Suchy Las, Poland; (A.L.); (E.S.); (J.S.-B.); (S.N.); (M.S.); (P.Ś.)
| | - Joanna Składanowska-Baryza
- Department of Animal Breeding and Product Quality Assessment, Poznan University of Life Sciences, Słoneczna 1, 62-002 Suchy Las, Poland; (A.L.); (E.S.); (J.S.-B.); (S.N.); (M.S.); (P.Ś.)
| | - Hanna Biesiada
- Laboratory of Veterinary Public Health Protection, Department of Animal Breeding and Product Quality Assessment, Poznan University of Life Sciences, Słoneczna 1, 62-002 Suchy Las, Poland;
| | - Tomasz Nowak
- Department of Genetics and Animal Breeding, Animal Reproduction Laboratory, Poznan University of Life Sciences, 60-637 Poznan, Poland;
| | - Sebastian Nowaczewski
- Department of Animal Breeding and Product Quality Assessment, Poznan University of Life Sciences, Słoneczna 1, 62-002 Suchy Las, Poland; (A.L.); (E.S.); (J.S.-B.); (S.N.); (M.S.); (P.Ś.)
| | - Maciej Zaborowicz
- Institute of Biosystems Engineering, Poznan University of Life Sciences, 60-637 Poznan, Poland;
| | - Marek Stanisz
- Department of Animal Breeding and Product Quality Assessment, Poznan University of Life Sciences, Słoneczna 1, 62-002 Suchy Las, Poland; (A.L.); (E.S.); (J.S.-B.); (S.N.); (M.S.); (P.Ś.)
| | - Piotr Ślósarz
- Department of Animal Breeding and Product Quality Assessment, Poznan University of Life Sciences, Słoneczna 1, 62-002 Suchy Las, Poland; (A.L.); (E.S.); (J.S.-B.); (S.N.); (M.S.); (P.Ś.)
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Larzul C. How to Improve Meat Quality and Welfare in Entire Male Pigs by Genetics. Animals (Basel) 2021; 11:ani11030699. [PMID: 33807677 PMCID: PMC7998615 DOI: 10.3390/ani11030699] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Revised: 12/09/2020] [Accepted: 12/10/2020] [Indexed: 11/25/2022] Open
Abstract
Simple Summary Successful breeding of entire male pigs needs a better understanding of factors driving meat quality and behavior traits as entire male pigs have lower meat quality, including an occasional strong defect known as boar taint, and more aggressive and sexual behavior. The review provides an update on how genetic factors affecting boar taint compounds and aggressive behavior in male pigs with emphasis on application in selection. Abstract Giving up surgical castration is desirable to avoid pain during surgery but breeding entire males raises issues on meat quality, particularly on boar taint, and aggression. It has been known for decades that boar taint is directly related to sexual development in uncastrated male pigs. The proportion of tainted carcasses depends on many factors, including genetics. The selection of lines with a low risk of developing boar taint should be considered as the most desirable solution in the medium to long term. It has been evidenced that selection against boar taint is feasible, and has been set up in a balanced way in some pig populations to counterbalance potential unfavorable effects on reproductive performances. Selection against aggressive behaviors, though theoretically feasible, faces phenotyping challenges that compromise selection in practice. In the near future, new developments in modelization, automatic recording, and genomic data will help define breeding objectives to solve entire male meat quality and welfare issues.
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Affiliation(s)
- Catherine Larzul
- GenPhySE, Université de Toulouse, French National Institute for Agriculture, Food, and Environment INRAE, ENVT, 31326 Castanet-Tolosan, France
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