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Li X, Su G, Pan C, Zhan J, Wang A, Han Z, Xiao D, He L. TRX h2-PP2AC2 module serves as a convergence node for aluminum stress and leaf senescence signals, regulating cell death via ABA-mediated ROS pathway. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 120:2602-2622. [PMID: 39527458 DOI: 10.1111/tpj.17131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Revised: 09/13/2024] [Accepted: 10/21/2024] [Indexed: 11/16/2024]
Abstract
ROS/redox signaling plays an important role in the regulation of signal transduction and acclimation pathways activated by multiple abiotic stresses and leaf senescence. However, the regulatory events that produce ROS under different stimuli are far from clear. Here, we report the elucidation of the molecular mechanism of an h type thioredoxin, AhTRX h2, positively regulates Al sensitivity and leaf senescence by promoting ROS. AhTRX h2 transcript levels increased greatly during both natural senescence and Al stress condition in peanut. Ectopic expression of AhTRX h2 in Arabidopsis conferred Al sensitivity as well as premature leaf senescence, manifested by multiple indices, including inhibiting root elongation, severe cell death, and accelerated expression of MC1 and CEX17. AhTRX h2 exhibited similar functions to AtTRX h2, as AhTRX h2 was able to restore the phenotypes of the AtTRX h2 defective mutant (trxh2-4) which showed Al tolerant and late senescence phenotypes. The knock down of AhTRX h2 markedly suppressed Al- and senescence-induced cell death in peanut. AhTRX h2 could recruit catalytic subunit of protein phosphatase 2A (PP2AC2) to form a stable complex. The interaction between AhTRX h2 and AtPP2AC2, as well as AhPP2AC2 and AtTRX h2 was also proved. Overexpression of AhPP2AC2 significantly enhanced Al sensitivity and leaf senescence in Arabidopsis. Protein stability assay revealed that AhTRX h2 was more stable during aging or aluminum stress. Moreover, PP2AC2 could greatly enhance the stability of AhTRX h2 in vivo. Consistent with these observations, overexpression of AhPP2AC2 effectively enhanced AhTRX h2-induced Al sensitivity and precocious leaf senescence. AhTRX h2 and AhPP2AC2 required ABA and ROS in response to cell death under Al stress and senescence, and it was evidence to suggest that ABA acted upstream of ROS in this process. Together, AhTRX h2 and AhPP2AC2 constitute a stable complex that promotes the accumulation of ABA and ROS, effectively regulate cell death. These findings suggest that TRX h2-PP2AC2-mediated pathway may be a widespread mechanism in regulating Al stress and leaf senescence.
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Affiliation(s)
- Xia Li
- Guangxi Key Laboratory for Agro-Environment and Agro-Product Safety, Nanning, 530004, People's Republic of China
- College of Agriculture, Guangxi University, Nanning, 530004, People's Republic of China
| | - Guijun Su
- Guangxi Key Laboratory for Agro-Environment and Agro-Product Safety, Nanning, 530004, People's Republic of China
- College of Agriculture, Guangxi University, Nanning, 530004, People's Republic of China
| | - Chunliu Pan
- College of Agriculture, Guangxi University, Nanning, 530004, People's Republic of China
| | - Jie Zhan
- Guangxi Key Laboratory for Agro-Environment and Agro-Product Safety, Nanning, 530004, People's Republic of China
- College of Agriculture, Guangxi University, Nanning, 530004, People's Republic of China
- Guangxi Colleges and Universities Key Laboratory of Crop Cultivation and Tillage, Nanning, 530004, People's Republic of China
| | - Aiqin Wang
- Guangxi Key Laboratory for Agro-Environment and Agro-Product Safety, Nanning, 530004, People's Republic of China
- College of Agriculture, Guangxi University, Nanning, 530004, People's Republic of China
- Guangxi Colleges and Universities Key Laboratory of Crop Cultivation and Tillage, Nanning, 530004, People's Republic of China
| | - Zhuqiang Han
- Cash Crops Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, 530004, China
| | - Dong Xiao
- Guangxi Key Laboratory for Agro-Environment and Agro-Product Safety, Nanning, 530004, People's Republic of China
- College of Agriculture, Guangxi University, Nanning, 530004, People's Republic of China
- Guangxi Colleges and Universities Key Laboratory of Crop Cultivation and Tillage, Nanning, 530004, People's Republic of China
| | - Longfei He
- Guangxi Key Laboratory for Agro-Environment and Agro-Product Safety, Nanning, 530004, People's Republic of China
- College of Agriculture, Guangxi University, Nanning, 530004, People's Republic of China
- Guangxi Colleges and Universities Key Laboratory of Crop Cultivation and Tillage, Nanning, 530004, People's Republic of China
- Agricultural and Animal Husbandry Industry Development Research Institute, Guangxi University, Nanning, 530004, China
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2
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Herold L, Choi S, He SY, Zipfel C. The conserved AvrE family of bacterial effectors: functions and targets during pathogenesis. Trends Microbiol 2024:S0966-842X(24)00222-1. [PMID: 39278787 DOI: 10.1016/j.tim.2024.08.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2024] [Revised: 08/22/2024] [Accepted: 08/22/2024] [Indexed: 09/18/2024]
Abstract
The AvrE family of type III secreted effectors are highly conserved among many agriculturally important phytopathogenic bacteria. Despite their critical roles in the pathogenesis of phytopathogenic bacteria, the molecular functions and virulence mechanisms of these effectors have been largely unknown. However, recent studies have identified host-interacting proteins and demonstrated that AvrE family effectors can form water-permeable channels in the plant plasma membrane (PM) to create a hydrated and nutrient-rich extracellular space (apoplast) required for disease establishment. Here, we summarize these recent discoveries and highlight open questions related to AvrE-targeted host proteins.
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Affiliation(s)
- Laura Herold
- Institute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland
| | - Sera Choi
- Institute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland
| | - Sheng Yang He
- Department of Biology, Duke University, Durham, NC, USA; Howard Hughes Medical Institute, Duke University, Durham, NC, USA
| | - Cyril Zipfel
- Institute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland; The Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, UK.
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3
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Chen L, Zhang X, Li Q, Yang X, Huang Y, Zhang B, Ye L, Li X. Phosphatases: Decoding the Role of Mycorrhizal Fungi in Plant Disease Resistance. Int J Mol Sci 2024; 25:9491. [PMID: 39273439 PMCID: PMC11395649 DOI: 10.3390/ijms25179491] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2024] [Revised: 08/27/2024] [Accepted: 08/28/2024] [Indexed: 09/15/2024] Open
Abstract
Mycorrhizal fungi, a category of fungi that form symbiotic relationships with plant roots, can participate in the induction of plant disease resistance by secreting phosphatase enzymes. While extensive research exists on the mechanisms by which mycorrhizal fungi induce resistance, the specific contributions of phosphatases to these processes require further elucidation. This article reviews the spectrum of mycorrhizal fungi-induced resistance mechanisms and synthesizes a current understanding of how phosphatases mediate these effects, such as the induction of defense structures in plants, the negative regulation of plant immune responses, and the limitation of pathogen invasion and spread. It explores the role of phosphatases in the resistance induced by mycorrhizal fungi and provides prospective future research directions in this field.
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Affiliation(s)
- Li Chen
- Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China
- College of Food and Biological Engineering, Chengdu University, Chengdu 610106, China
| | - Xiaoping Zhang
- Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China
| | - Qiang Li
- College of Food and Biological Engineering, Chengdu University, Chengdu 610106, China
| | - Xuezhen Yang
- Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China
| | - Yu Huang
- Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China
| | - Bo Zhang
- Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China
| | - Lei Ye
- Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China
| | - Xiaolin Li
- Sichuan Institute of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China
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He Y, Chen S, Li C, Yang S, Sun Z, Hou S, Xu Z, Yang G. Walnut phosphatase 2A proteins interact with basic leucine zipper protein JrVIP1 to regulate osmotic stress response via calcium signaling. FORESTRY RESEARCH 2024; 4:e016. [PMID: 39524406 PMCID: PMC11543299 DOI: 10.48130/forres-0024-0012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Accepted: 04/07/2024] [Indexed: 11/16/2024]
Abstract
Walnut is an important economic tree species that is susceptible to osmotic stress. Scientific cultivation management is an important way to improve the yield and quality of walnuts, which requires understanding the regulatory mechanisms in response to osmotic stress. Therefore, in this study, 15 protein phosphatase 2A (PP2A) genes were identified from the walnut transcriptome (named JrPP2A01~15) and their potential function responses to osmotic stress were elucidated. The open reading frame (ORF) of JrPP2A01~15 ranges from 651 to 1,764 bp in length, the molecular weight of the encoded proteins are 24.15-65.61 kDa, and the theoretical isoelectric points are 4.80-8.37. These JrPP2As were unevenly distributed on 10 chromosomes and divided into five groups based on the composition of conserved domains, motifs, and exon/intron organizations. The five groups are JrPP2AAs, JrPP2AB's, JrPP2AB''s, JrPP2AB55s, and JrPP2ACs, including 1, 5, 2, 3, and 4 members, accordingly. The cis-elements in JrPP2As' promoters were involved in responses to hormone and abiotic stress. Most JrPP2A genes, excluding JrPP2A01, JrPP2A02, JrPP2A05, JrPP2A06, and JrPP2A13, could be induced significantly by PEG6000, NaCl, CaCl2 and ABA. JrPP2A02, JrPP2A05, JrPP2A07, JrPP2A09, and JrPP2A14, could independently interact with a bZIP transcription factor JrVIP1. Moreover, overexpression of JrPP2A07, JrPP2A09, and JrPP2A14 could significantly decrease ROS accumulation while increasing calcium (Ca) uptake exposed to PEG6000 and NaCl stresses, which was mediated by exogenous CaCl2 and ABA. These results suggested that JrPP2A genes play potential key roles in walnut response to drought and salt-inducing osmotic stress involving Ca- and ABA-dependent signaling pathways.
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Affiliation(s)
- Yi He
- Shaanxi Province Walnut Engineering Technology Research Center, College of Forestry, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Shuwen Chen
- Shaanxi Province Walnut Engineering Technology Research Center, College of Forestry, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Chenhao Li
- Shaanxi Province Walnut Engineering Technology Research Center, College of Forestry, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Shen Yang
- Shaanxi Province Walnut Engineering Technology Research Center, College of Forestry, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Zhongyu Sun
- Shaanxi Province Walnut Engineering Technology Research Center, College of Forestry, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Siyu Hou
- Shaanxi Province Walnut Engineering Technology Research Center, College of Forestry, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Zhenggang Xu
- Shaanxi Province Walnut Engineering Technology Research Center, College of Forestry, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Guiyan Yang
- Shaanxi Province Walnut Engineering Technology Research Center, College of Forestry, Northwest A&F University, Yangling 712100, Shaanxi, China
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Wang L, Jian Z, Wang P, Zhao L, Chen K. Combined physiological responses and differential expression of drought-responsive genes preliminarily explain the drought resistance mechanism of Lotus corniculatus. FUNCTIONAL PLANT BIOLOGY : FPB 2023; 50:46-57. [PMID: 36031596 DOI: 10.1071/fp22051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Accepted: 08/05/2022] [Indexed: 06/15/2023]
Abstract
Lotus corniculatus L. is a perennial high-quality legume forage species but is vulnerable to drought, and water deficit reduces productivity. To understand the drought response mechanism of L. corniculatus , we investigated physiological responses under drought stress and constructed suppression subtractive hybridisation (SSH) cDNA libraries to isolate drought-inducible genes and quantitatively study the expression levels of candidate drought- responsive genes. Genes encoding calmodulin-like protein, mitogen-activated protein kinase, indole-3-acetic acid-induced protein, ser/thr-protein phosphatase homolog-related proteins, and β -galactosidase-related protein with hydrolysis activity were isolated and considered the main factors that explained the resistance of L. corniculatus to drought. Approximately 632 expressed sequence tags (ESTs) were identified and confirmed in the constructed SSH library. The Gene Ontology (GO) analysis revealed that these genes were involved mainly in transcription processes, protein synthesis, material metabolism, catalytic reactions, sugar metabolism, and photosynthesis. The interaction between the functions of these drought-related genes and the physiological responses preliminarily explains the drought resistance mechanisms of L. corniculatus .
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Affiliation(s)
- Leiting Wang
- College of Animal Science, Guizhou University, Guiyang 550025, China
| | - Zhongling Jian
- College of Animal Science, Guizhou University, Guiyang 550025, China
| | - Puchang Wang
- Guizhou Institute of Prataculture, Guiyang 550006, China
| | - Lili Zhao
- College of Animal Science, Guizhou University, Guiyang 550025, China; and State Engineering Technology Institute for Karst Rocky Desertification Control, Guiyang 550025, China
| | - Keke Chen
- College of Animal Science, Guizhou University, Guiyang 550025, China
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Ma X, Gu Y, Liang C. Adaptation of protein phosphatases in Oryza sativa and Cucumis sativus to microcystins. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:7018-7029. [PMID: 36018413 DOI: 10.1007/s11356-022-22691-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Accepted: 08/19/2022] [Indexed: 06/15/2023]
Abstract
Microcystins (MCs) in irrigation water could inhibit crop growth and yield. Protein phosphatases (PPs) play an important role in regulating physiological mechanisms in plants to adapt abiotic stresses. To clarify the adaptation mechanism in plants to MCs stress, we compared PPs in rice and cucumber leaves by analyzing PPs total activity, protein phosphatase-2A (PP2A) activity and expression, as well as related growth and gas exchange parameters. After 7-day exposure of MCs (5 ~ 100 µg/L) and 7-day recovery without MCs, rice showed higher tolerance to MCs by analyzing dry weight and gas exchange parameters. Both crops may regulate PPs activity to adapt MCs stress by increasing the expression of genes encoding PPs. Among them, PP2A activity in two crops showed more sensitivity to MCs than total PPs activity. In addition, the higher expressions of PP2A catalytic and regulatory subunits and lower decrease PP2A activity were observed in rice leaves compared to cucumber. All results suggest that the expression levels of PP2A subunits could play a role in maintaining the activity of PP2A to regulating plant tolerance to MCs stress.
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Affiliation(s)
- Xudong Ma
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China
- Jiangsu Key Laboratory of Anaerobic Biotechnology, School of Environmental and Civil Engineering, Jiangnan University, Wuxi, 214122, China
| | - Yanfang Gu
- Jiangsu Key Laboratory of Anaerobic Biotechnology, School of Environmental and Civil Engineering, Jiangnan University, Wuxi, 214122, China
| | - Chanjuan Liang
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.
- Jiangsu Key Laboratory of Anaerobic Biotechnology, School of Environmental and Civil Engineering, Jiangnan University, Wuxi, 214122, China.
- Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, Suzhou, 215009, China.
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7
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Almira Casellas MJ, Pérez‐Martín L, Busoms S, Boesten R, Llugany M, Aarts MGM, Poschenrieder C. A genome-wide association study identifies novel players in Na and Fe homeostasis in Arabidopsis thaliana under alkaline-salinity stress. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2023; 113:225-245. [PMID: 36433704 PMCID: PMC10108281 DOI: 10.1111/tpj.16042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 11/11/2022] [Accepted: 11/21/2022] [Indexed: 06/16/2023]
Abstract
In nature, multiple stress factors occur simultaneously. The screening of natural diversity panels and subsequent Genome-Wide Association Studies (GWAS) is a powerful approach to identify genetic components of various stress responses. Here, the nutritional status variation of a set of 270 natural accessions of Arabidopsis thaliana grown on a natural saline-carbonated soil is evaluated. We report significant natural variation on leaf Na (LNa) and Fe (LFe) concentrations in the studied accessions. Allelic variation in the NINJA and YUC8 genes is associated with LNa diversity, and variation in the ALA3 is associated with LFe diversity. The allelic variation detected in these three genes leads to changes in their mRNA expression and correlates with plant differential growth performance when plants are exposed to alkaline salinity treatment under hydroponic conditions. We propose that YUC8 and NINJA expression patters regulate auxin and jasmonic signaling pathways affecting plant tolerance to alkaline salinity. Finally, we describe an impairment in growth and leaf Fe acquisition associated with differences in root expression of ALA3, encoding a phospholipid translocase active in plasma membrane and the trans Golgi network which directly interacts with proteins essential for the trafficking of PIN auxin transporters, reinforcing the role of phytohormonal processes in regulating ion homeostasis under alkaline salinity.
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Affiliation(s)
- Maria Jose Almira Casellas
- Plant Physiology Laboratory, Bioscience FacultyUniversitat Autònoma de BarcelonaC/de la Vall Moronta s/nE‐08193BellaterraSpain
| | - Laura Pérez‐Martín
- Plant Physiology Laboratory, Bioscience FacultyUniversitat Autònoma de BarcelonaC/de la Vall Moronta s/nE‐08193BellaterraSpain
- Department of Botany and Plant BiologyUniversity of Geneva1211GenevaSwitzerland
| | - Silvia Busoms
- Plant Physiology Laboratory, Bioscience FacultyUniversitat Autònoma de BarcelonaC/de la Vall Moronta s/nE‐08193BellaterraSpain
| | - René Boesten
- Laboratory of GeneticsWageningen University and ResearchDroevendaalsesteeg 16708 PBWageningenThe Netherlands
| | - Mercè Llugany
- Plant Physiology Laboratory, Bioscience FacultyUniversitat Autònoma de BarcelonaC/de la Vall Moronta s/nE‐08193BellaterraSpain
| | - Mark G. M. Aarts
- Laboratory of GeneticsWageningen University and ResearchDroevendaalsesteeg 16708 PBWageningenThe Netherlands
| | - Charlotte Poschenrieder
- Plant Physiology Laboratory, Bioscience FacultyUniversitat Autònoma de BarcelonaC/de la Vall Moronta s/nE‐08193BellaterraSpain
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8
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Bhurta R, Hurali DT, Tyagi S, Sathee L, Adavi B S, Singh D, Mallick N, Chinnusamy V, Vinod, Jha SK. Genome-Wide Identification and Expression Analysis of the Thioredoxin ( Trx) Gene Family Reveals Its Role in Leaf Rust Resistance in Wheat ( Triticum aestivum L.). Front Genet 2022; 13:836030. [PMID: 35401694 PMCID: PMC8990325 DOI: 10.3389/fgene.2022.836030] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 02/28/2022] [Indexed: 01/11/2023] Open
Abstract
Bread wheat (Triticum aestivum L.; Ta) is the staple cereal crop for the majority of the world’s population. Leaf rust disease caused by the obligate fungal pathogen, Puccinia triticina L., is a biotrophic pathogen causing significant economic yield damage. The alteration in the redox homeostasis of the cell caused by various kinds of reactive oxygen species (ROS) and reactive nitrogen species (RNS) in response to pathogenic infections is controlled by redox regulators. Thioredoxin (Trx) is one of the redox regulators with low molecular weight and is thermostable. Through a genome-wide approach, forty-two (42) wheat Trx genes (TaTrx) were identified across the wheat chromosome groups A, B, and D genomes containing 12, 16, and 14 Trx genes, respectively. Based on in silico expression analysis, 15 TaTrx genes were selected and utilized for further experimentation. These 15 genes were clustered into six groups by phylogenetic analysis. MicroRNA (miRNA) target analysis revealed eight different miRNA-targeted TaTrx genes. Protein–protein interaction (PPI) analysis showed TaTrx proteins interact with thioredoxin reductase, peroxiredoxin, and uncharacterized proteins. Expression profiles resulting from quantitative real-time PCR (qRT-PCR) revealed four TaTrx genes (TaTrx11-5A, TaTrx13-5B, TaTrx14-5D, and TaTrx15-3B) were significantly induced in response to leaf rust infection. Localization of ROS and its content estimation and an assay of antioxidant enzymes and expression analysis suggested that Trx have been involved in ROS homeostasis at span 24HAI-72HAI during the leaf rust resistance.
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Affiliation(s)
| | | | - Sandhya Tyagi
- Division of Plant Physiology, ICAR-IARI, New Delhi, India
| | - Lekshmy Sathee
- Division of Plant Physiology, ICAR-IARI, New Delhi, India
| | | | - Dalveer Singh
- Division of Plant Physiology, ICAR-IARI, New Delhi, India
| | | | | | - Vinod
- Division of Genetics, ICAR-IARI, New Delhi, India
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Lin QJ, Chu J, Kumar V, Yuan DP, Li ZM, Mei Q, Xuan YH. Protein Phosphatase 2A Catalytic Subunit PP2A-1 Enhances Rice Resistance to Sheath Blight Disease. Front Genome Ed 2021; 3:632136. [PMID: 34713255 PMCID: PMC8525387 DOI: 10.3389/fgeed.2021.632136] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2020] [Accepted: 02/08/2021] [Indexed: 11/22/2022] Open
Abstract
Rice (Oryza sativa) production is damaged to a great extent by sheath blight disease (ShB). However, the defense mechanism in rice against this disease is largely unknown. Previous transcriptome analysis identified a significantly induced eukaryotic protein phosphatase 2A catalytic subunit 1 (PP2A-1) after the inoculation of Rhizoctonia solani. Five genes encoding PP2A exist in rice genome, and these five genes are ubiquitously expressed in different tissues and stages. Inoculation of R. solani showed that the genome edited pp2a-1 mutants using the CRISPR/Cas9 were more susceptible to ShB than the wild-type control, but other PP2A gene mutants exhibited similar response to ShB compared to wild-type plants. In parallel, PP2A-1 expression level was higher in the activation tagging line, and PP2A-1 overexpression inhibited plant height and promoted the resistance to ShB. PP2A-1-GFP was localized in the cytoplasm and nucleus. In addition, R. solani-dependent induction kinetics of pathogen-related genes PBZ1 and PR1b was lower in pp2a-1 mutants but higher in PP2A-1 activation line compared to those in the wild-type. In conclusion, our analysis shows that PP2A-1 is a member of protein phosphatase, which regulates rice resistance to ShB. This result broadens the understanding of the defense mechanism against ShB and provides a potential target for rice breeding for disease resistance.
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Affiliation(s)
- Qiu Jun Lin
- College of Plant Protection, Shenyang Agricultural University, Shenyang, China
| | - Jin Chu
- Institute of Plant Protection, Liaoning Academy of Agricultural Sciences, Shenyang, China
| | - Vikranth Kumar
- Division of Applied Life Science (BK21 Program), Plant Molecular Biology and Biotechnology Research Center (PMBBRC), Gyeongsang National University, Jinju, South Korea
| | - De Peng Yuan
- College of Plant Protection, Shenyang Agricultural University, Shenyang, China
| | - Zhi Min Li
- College of Plant Protection, Shenyang Agricultural University, Shenyang, China
| | - Qiong Mei
- College of Plant Protection, Shenyang Agricultural University, Shenyang, China
| | - Yuan Hu Xuan
- College of Plant Protection, Shenyang Agricultural University, Shenyang, China
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Subcellular Alterations Induced by Cyanotoxins in Vascular Plants-A Review. PLANTS 2021; 10:plants10050984. [PMID: 34069255 PMCID: PMC8157112 DOI: 10.3390/plants10050984] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 05/08/2021] [Accepted: 05/09/2021] [Indexed: 01/26/2023]
Abstract
Phytotoxicity of cyanobacterial toxins has been confirmed at the subcellular level with consequences on whole plant physiological parameters and thus growth and productivity. Most of the data are available for two groups of these toxins: microcystins (MCs) and cylindrospermopsins (CYNs). Thus, in this review we present a timely survey of subcellular cyanotoxin effects with the main focus on these two cyanotoxins. We provide comparative insights into how peculiar plant cellular structures are affected. We review structural changes and their physiological consequences induced in the plastid system, peculiar plant cytoskeletal organization and chromatin structure, the plant cell wall, the vacuolar system, and in general, endomembrane structures. The cyanotoxins have characteristic dose-and plant genotype-dependent effects on all these structures. Alterations in chloroplast structure will influence the efficiency of photosynthesis and thus plant productivity. Changing of cell wall composition, disruption of the vacuolar membrane (tonoplast) and cytoskeleton, and alterations of chromatin structure (including DNA strand breaks) can ultimately lead to cell death. Finally, we present an integrated view of subcellular alterations. Knowledge on these changes will certainly contribute to a better understanding of cyanotoxin–plant interactions.
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Abbasi-Vineh MA, Sabet MS, Karimzadeh G. Identification and Functional Analysis of Two Purple Acid Phosphatases AtPAP17 and AtPAP26 Involved in Salt Tolerance in Arabidopsis thaliana Plant. FRONTIERS IN PLANT SCIENCE 2021; 11:618716. [PMID: 33679819 PMCID: PMC7928345 DOI: 10.3389/fpls.2020.618716] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2020] [Accepted: 12/31/2020] [Indexed: 05/06/2023]
Abstract
Tolerance to salinity is a complex genetic trait including numerous physiological processes, such as metabolic pathways and gene networks; thereby, identification of genes indirectly affecting, as well as those directly influencing, is of utmost importance. In this study, we identified and elucidated the functional characterization of AtPAP17 and AtPAP26 genes, as two novel purple acid phosphatases associated with high-salt tolerance in NaCl-stressed conditions. Here, the overexpression of both genes enhanced the expression level of AtSOS1, AtSOS2, AtSOS3, AtHKT1, AtVPV1, and AtNHX1 genes, involving in the K+/Na+ homeostasis pathway. The improved expression of the genes led to facilitating intracellular Na+ homeostasis and decreasing the ion-specific damages occurred in overexpressed genotypes (OEs). An increase in potassium content and K+/Na+ ratio was observed in OE17 and OE26 genotypes as well; however, lower content of sodium accumulated in these plants at 150 mM NaCl. The overexpression of these two genes resulted in the upregulation of the activity of the catalase, guaiacol peroxidase, and ascorbate peroxidase. Consequently, the overexpressed plants showed the lower levels of hydrogen peroxide where the lowest amount of lipid peroxidation occurred in these lines. Besides the oxidation resistance, the boost of the osmotic regulation through the increased proline and glycine-betaine coupled with a higher content of pigments and carbohydrates resulted in significantly enhancing biomass production and yield in the OEs under 150 mM NaCl. High-salt stress was also responsible for a sharp induction on the expression of both PAP17 and PAP26 genes. Our results support the hypothesis that these two phosphatases are involved in plant responses to salt stress by APase activity and/or non-APase activity thereof. The overexpression of PAP17 and PAP26 could result in increasing the intracellular APase activity in both OEs, which exhibited significant increases in the total phosphate and free Pi content compared to the wild-type plants. Opposite results witnessed in mutant genotypes (Mu17, Mu26, and DM), associating with the loss of AtPAP17 and AtPAP26 functions, clearly confirmed the role of these two genes in salt tolerance. Hence, these genes can be used as candidate genes in molecular breeding approaches to improve the salinity tolerance of crop plants.
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Affiliation(s)
- Mohammad Ali Abbasi-Vineh
- Department of Agricultural Biotechnology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Mohammad Sadegh Sabet
- Department of Plant Genetics and Breeding, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Ghasem Karimzadeh
- Department of Plant Genetics and Breeding, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
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12
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Doroodian P, Hua Z. The Ubiquitin Switch in Plant Stress Response. PLANTS (BASEL, SWITZERLAND) 2021; 10:246. [PMID: 33514032 PMCID: PMC7911189 DOI: 10.3390/plants10020246] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/01/2021] [Revised: 01/19/2021] [Accepted: 01/22/2021] [Indexed: 12/20/2022]
Abstract
Ubiquitin is a 76 amino acid polypeptide common to all eukaryotic organisms. It functions as a post-translationally modifying mark covalently linked to a large cohort of yet poorly defined protein substrates. The resulting ubiquitylated proteins can rapidly change their activities, cellular localization, or turnover through the 26S proteasome if they are no longer needed or are abnormal. Such a selective modification is essential to many signal transduction pathways particularly in those related to stress responses by rapidly enhancing or quenching output. Hence, this modification system, the so-called ubiquitin-26S proteasome system (UPS), has caught the attention in the plant research community over the last two decades for its roles in plant abiotic and biotic stress responses. Through direct or indirect mediation of plant hormones, the UPS selectively degrades key components in stress signaling to either negatively or positively regulate plant response to a given stimulus. As a result, a tightly regulated signaling network has become of much interest over the years. The ever-increasing changes of the global climate require both the development of new crops to cope with rapid changing environment and new knowledge to survey the dynamics of ecosystem. This review examines how the ubiquitin can switch and tune plant stress response and poses potential avenues to further explore this system.
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Affiliation(s)
- Paymon Doroodian
- Department of Environment and Plant Biology, Ohio University, Athens, OH 45701, USA;
- Molecular and Cellular Biology Program, Ohio University, Athens, OH 45701, USA
| | - Zhihua Hua
- Department of Environment and Plant Biology, Ohio University, Athens, OH 45701, USA;
- Molecular and Cellular Biology Program, Ohio University, Athens, OH 45701, USA
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13
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Xiong Y, Fan XH, Wang Q, Yin ZG, Sheng XW, Chen J, Zhou YB, Chen M, Ma YZ, Ma J, Xu ZS. Genomic Analysis of Soybean PP2A-B ' ' Family and Its Effects on Drought and Salt Tolerance. FRONTIERS IN PLANT SCIENCE 2021; 12:784038. [PMID: 35195114 PMCID: PMC8847135 DOI: 10.3389/fpls.2021.784038] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Accepted: 12/30/2021] [Indexed: 05/05/2023]
Abstract
Abiotic stresses induce the accumulation of reactive oxygen species (ROS) and significantly affect plant growth. Protein phosphatase 2A (PP2A) plays an important role in controlling intracellular and extracellular ROS signals. However, the interaction between PP2A, ROS, and stress tolerance remains largely unclear. In this study, we found that the B ' ' subunit of PP2A (PP2A-B ' ' ) can be significantly induced and was analyzed using drought- and salt-induced soybean transcriptome data. Eighty-three soybean PP2A-B ' ' genes were identified from the soybean genome via homologous sequence alignment, which was distributed across 20 soybean chromosomes. Among soybean PP2A-B ' ' family genes, 26 GmPP2A-B ' ' members were found to be responsive to drought and salt stresses in soybean transcriptome data. Quantitative PCR (qPCR) analysis demonstrated that GmPP2A-B ' ' 71 had the highest expression levels under salt and drought stresses. Functional analysis demonstrated that overexpression of GmPP2A-B ' ' 71 in soybeans can improve plant tolerance to drought and salt stresses; however, the interference of GmPP2A-B ' ' 71 in soybean increased the sensibility to drought and salt stresses. Further analysis demonstrated that overexpression of GmPP2A-B ' ' 71 in soybean could enhance the expression levels of stress-responsive genes, particularly genes associated with ROS elimination. These results indicate that PP2A-B ' ' can promote plant stress tolerance by regulating the ROS signaling, which will contribute to improving the drought resistance of crops.
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Affiliation(s)
- Yang Xiong
- College of Agronomy, Jilin Agricultural University, Changchun, China
- Institute of Crop Science, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, China
| | - Xu-Hong Fan
- Soybean Research Institute, Jilin Academy of Agricultural Sciences/National Engineering Research Center for Soybean, Changchun, China
| | - Qiang Wang
- Crop Resources Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, China
| | - Zheng-Gong Yin
- Crop Resources Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, China
| | - Xue-Wen Sheng
- College of Modern Agriculture, Changchun Vocational Institute of Technology, Changchun, China
| | - Jun Chen
- Institute of Crop Science, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, China
| | - Yong-Bin Zhou
- Institute of Crop Science, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, China
| | - Ming Chen
- Institute of Crop Science, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, China
| | - You-Zhi Ma
- Institute of Crop Science, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, China
| | - Jian Ma
- College of Agronomy, Jilin Agricultural University, Changchun, China
- *Correspondence: Jian Ma,
| | - Zhao-Shi Xu
- College of Agronomy, Jilin Agricultural University, Changchun, China
- Institute of Crop Science, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, China
- Zhao-Shi Xu,
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Khan ZH, Agarwal S, Rai A, Memaya MB, Mehrotra S, Mehrotra R. Co-expression network analysis of protein phosphatase 2A (PP2A) genes with stress-responsive genes in Arabidopsis thaliana reveals 13 key regulators. Sci Rep 2020; 10:21480. [PMID: 33293553 PMCID: PMC7722862 DOI: 10.1038/s41598-020-77746-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2020] [Accepted: 10/26/2020] [Indexed: 12/17/2022] Open
Abstract
Abiotic and biotic stresses adversely affect plant growth and development and eventually result in less yield and threaten food security worldwide. In plants, several studies have been carried out to understand molecular responses to abiotic and biotic stresses. However, the complete circuitry of stress-responsive genes that plants utilise in response to those environmental stresses are still unknown. The protein phosphatase 2A (PP2A) gene has been known to have a crucial role in abiotic and biotic stresses; but how it regulates the stress response in plants is still not known completely. In this study, we constructed gene co-expression networks of PP2A genes with stress-responsive gene datasets from cold, drought, heat, osmotic, genotoxic, salt, and wounding stresses to unveil their relationships with the PP2A under different conditions of stress. The graph analysis identified 13 hub genes and several influential genes based on closeness centrality score (CCS). Our findings also revealed the count of unique genes present in different settings of stresses and subunits. We also formed clusters of influential genes based on the stress, CCS, and co-expression value. Analysis of cis-regulatory elements (CREs), recurring in promoters of these genes was also performed. Our study has led to the identification of 16 conserved CREs.
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Affiliation(s)
- Zaiba Hasan Khan
- Department of Biological Sciences, K.K. Birla Goa Campus, BITS-Pilani, Goa, India
| | - Swati Agarwal
- Department of Computer Science and Information Systems, K.K. Birla Goa Campus, BITS-Pilani, Goa, India.
| | - Atul Rai
- Department of Computer Science and Information Systems, K.K. Birla Goa Campus, BITS-Pilani, Goa, India
| | - Mounil Binal Memaya
- Department of Computer Science and Information Systems, K.K. Birla Goa Campus, BITS-Pilani, Goa, India
| | - Sandhya Mehrotra
- Department of Biological Sciences, K.K. Birla Goa Campus, BITS-Pilani, Goa, India
| | - Rajesh Mehrotra
- Department of Biological Sciences, K.K. Birla Goa Campus, BITS-Pilani, Goa, India.
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15
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Maurya R, Srivastava D, Singh M, Sawant SV. Envisioning the immune interactome in Arabidopsis. FUNCTIONAL PLANT BIOLOGY : FPB 2020; 47:486-507. [PMID: 32345431 DOI: 10.1071/fp19188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Accepted: 01/13/2020] [Indexed: 06/11/2023]
Abstract
During plant-pathogen interaction, immune targets were regulated by protein-protein interaction events such as ligand-receptor/co-receptor, kinase-substrate, protein sequestration, activation or repression via post-translational modification and homo/oligo/hetro-dimerisation of proteins. A judicious use of molecular machinery requires coordinated protein interaction among defence components. Immune signalling in Arabidopsis can be broadly represented in successive or simultaneous steps; pathogen recognition at cell surface, Ca2+ and reactive oxygen species signalling, MAPK signalling, post-translational modification, transcriptional regulation and phyto-hormone signalling. Proteome wide interaction studies have shown the existence of interaction hubs associated with physiological function. So far, a number of protein interaction events regulating immune targets have been identified, but their understanding in an interactome view is lacking. We focussed specifically on the integration of protein interaction signalling in context to plant-pathogenesis and identified the key targets. The present review focuses towards a comprehensive view of the plant immune interactome including signal perception, progression, integration and physiological response during plant pathogen interaction.
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Affiliation(s)
- Rashmi Maurya
- Plant Molecular Biology Lab, National Botanical Research Institute, Lucknow. 226001; and Department of Botany, Lucknow University, Lucknow. 226007
| | - Deepti Srivastava
- Integral Institute of Agricultural Science and Technology (IIAST) Integral University, Kursi Road, Dashauli, Uttar Pradesh. 226026
| | - Munna Singh
- Department of Botany, Lucknow University, Lucknow. 226007
| | - Samir V Sawant
- Plant Molecular Biology Lab, National Botanical Research Institute, Lucknow. 226001; and Corresponding author.
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16
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Majumdar A, Kar RK. Chloroplast avoidance movement: a novel paradigm of ROS signalling. PHOTOSYNTHESIS RESEARCH 2020; 144:109-121. [PMID: 32222888 DOI: 10.1007/s11120-020-00736-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2019] [Accepted: 03/16/2020] [Indexed: 06/10/2023]
Abstract
The damaging effects of supra-optimal irradiance on plants, often turning to be lethal, may be circumvented by chloroplast avoidance movement which realigns chloroplasts to the anticlinal surfaces of cells (parallel to the incident light), essentially minimizing photon absorption. In angiosperms and many other groups of plants, chloroplast avoidance movement has been identified to be a strong blue light (BL)-dependent process being mediated by actin filaments wherein phototropins are identified as the photoreceptor involved. Studies through the last few decades have identified key molecular mechanisms involving Chloroplast Unusual Positioning 1 (CHUP1) protein and specific chloroplast-actin (cp-actin) filaments. However, the signal transduction pathway from strong BL absorption down to directional re-localization of chloroplasts by actin filaments is complex and ambiguous. Being the immediate cellular products of high irradiance absorption and having properties of remodelling actin as well as phototropin, reactive oxygen species (ROS) deemed to be more able and prompt than any other signalling agent in mediating chloroplast avoidance movement. Although ROS are presently being identified as fundamental component for regulating different plant processes ranging from growth, development and immunity, its role in avoidance movement have hardly been explored in depth. However, few recent reports have demonstrated the direct stimulatory involvement of ROS, especially H2O2, in chloroplast avoidance movement with Ca2+ playing a pivotal role. With this perspective, the present review discusses the mechanisms of ROS-mediated chloroplast avoidance movement involving ROS-Ca2+-actin communication system and NADPH oxidase (NOX)-plasma membrane (PM) H+-ATPase positive feed-forward loop. A possible working model is proposed.
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Affiliation(s)
- Arkajo Majumdar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan, West Bengal, 731235, India
- Department of Botany, City College, 102/1 Raja Rammohan Sarani, Kolkata, West Bengal, 700009, India
| | - Rup Kumar Kar
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Visva-Bharati University, Santiniketan, West Bengal, 731235, India.
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17
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An Y, Xiong L, Hu S, Wang L. PP2A and microtubules function in 5-aminolevulinic acid-mediated H 2 O 2 signaling in Arabidopsis guard cells. PHYSIOLOGIA PLANTARUM 2020; 168:709-724. [PMID: 31381165 DOI: 10.1111/ppl.13016] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Revised: 07/23/2019] [Accepted: 07/31/2019] [Indexed: 06/10/2023]
Abstract
5-aminolevulinic acid (ALA), a plant growth regulator with great application potential in agriculture and horticulture, induces stomatal opening and inhibits stomatal closure by decreasing guard cell H2 O2 . However, the mechanisms behind ALA-decreased H2 O2 in guard cells are not fully understood. Here, using type 2A protein phosphatase (PP2A) inhibitors, microtubule-stabilizing/disrupting drugs and green fluorescent protein-tagged α-tubulin 6 transgenic Arabidopsis (GFP-TUA6), we find that PP2A and cortical microtubules (MTs) are involved in ALA-regulated stomatal movement. Then, we analyze stomatal responses of Arabidopsis overexpressing C2 catalytic subunit of PP2A (PP2A-C2) and pp2a-c2 mutant to ALA and abscisic acid (ABA) under both light and dark conditions, and show that PP2A-C2 participates in ALA-induced stomatal movement. Furthermore, using pharmacological methods and confocal studies, we reveal that PP2A and MTs function upstream and downstream, respectively, of H2 O2 in guard cell signaling. Finally, we demonstrate the role of H2 O2 -mediated microtubule arrangement in ALA inhibiting ABA-induced stomatal closure. Our findings indicate that MTs regulated by PP2A-mediated H2 O2 decreasing play an important role in ALA guard cell signaling, revealing new insights into stomatal movement regulation.
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Affiliation(s)
- Yuyan An
- College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Lijun Xiong
- College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Shu Hu
- College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Liangju Wang
- College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China
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18
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Yang Q, Niu X, Tian X, Zhang X, Cong J, Wang R, Zhang G, Li G. Comprehensive genomic analysis of the DUF4228 gene family in land plants and expression profiling of ATDUF4228 under abiotic stresses. BMC Genomics 2020; 21:12. [PMID: 31900112 PMCID: PMC6942412 DOI: 10.1186/s12864-019-6389-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2019] [Accepted: 12/12/2019] [Indexed: 01/24/2023] Open
Abstract
Background Domain of unknown function (DUF) proteins represent a number of gene families that encode functionally uncharacterized proteins in eukaryotes. The DUF4228 gene family is one of these families in plants that has not been described previously. Results In this study, we performed an extensive comparative analysis of DUF4228 proteins and determined their phylogeny in the plant lineage. A total of 489 high-confidence DUF4228 family members were identified from 14 land plant species, which sub-divided into three distinct phylogenetic groups: group I, group II and group III. A highly conserved DUF4228 domain and motif distribution existed in each group, implying their functional conservation. To reveal the possible biological functions of these DUF4228 genes, 25 ATDUF4228 sequences from Arabidopsis thaliana were selected for further analysis of characteristics such as their chromosomal position, gene duplications and gene structures. Ka/Ks analysis identified seven segmental duplication events, while no tandemly duplication gene pairs were found in A. thaliana. Some cis-elements responding to abiotic stress and phytohormones were identified in the upstream sequences of the ATDUF4228 genes. Expression profiling of the ATDUF4228 genes under abiotic stresses (mainly osmotic, salt and cold) and protein-protein interaction prediction suggested that some ATDUF4228 genes are may be involved in the pathways of plant resistance to abiotic stresses. Conclusion These results expand our knowledge of the evolution of the DUF4228 gene family in plants and will contribute to the elucidation of the biological functions of DUF4228 genes in the future.
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Affiliation(s)
- Qi Yang
- College of Life Sciences, Inner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, Inner Mongolia Agricultural University, Hohhot, China
| | - Xiaocui Niu
- College of Life Sciences, Inner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, Inner Mongolia Agricultural University, Hohhot, China
| | - Xiaona Tian
- College of Life Sciences, Inner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, Inner Mongolia Agricultural University, Hohhot, China
| | - Xiujuan Zhang
- College of Life Sciences, Inner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, Inner Mongolia Agricultural University, Hohhot, China
| | - Jingyu Cong
- College of Life Sciences, Inner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, Inner Mongolia Agricultural University, Hohhot, China
| | - Ruigang Wang
- College of Life Sciences, Inner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, Inner Mongolia Agricultural University, Hohhot, China
| | - Guosheng Zhang
- Forestry College, Inner Mongolia Agricultural University, Hohhot, China.
| | - Guojing Li
- College of Life Sciences, Inner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, Inner Mongolia Agricultural University, Hohhot, China.
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Krasensky-Wrzaczek J, Kangasjärvi J. The role of reactive oxygen species in the integration of temperature and light signals. JOURNAL OF EXPERIMENTAL BOTANY 2018; 69:3347-3358. [PMID: 29514325 DOI: 10.1093/jxb/ery074] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2017] [Accepted: 02/13/2018] [Indexed: 05/22/2023]
Abstract
The remarkable plasticity of the biochemical machinery in plants allows the integration of a multitude of stimuli, enabling acclimation to a wide range of growth conditions. The integration of information on light and temperature enables plants to sense seasonal changes and adjust growth, defense, and transition to flowering according to the prevailing conditions. By now, the role of reactive oxygen species (ROS) as important signaling molecules has been established. Here, we review recent data on ROS as important components in the integration of light and temperature signaling by crosstalk with the circadian clock and calcium signaling. Furthermore, we highlight that different environmental conditions critically affect the interpretation of stress stimuli, and consequently defense mechanisms and stress outcome. For example, day length plays an important role in whether enhanced ROS production under stress conditions is directed towards activation of redox poising mechanisms or triggering programmed cell death (PCD). Furthermore, a mild increase in temperature can cause down-regulation of immunity and render plants more sensitive to biotrophic pathogens. Taken together, the evidence presented here demonstrates the complexity of signaling pathways and outline the importance of their correct interpretation in context with the given environmental conditions.
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Affiliation(s)
- Julia Krasensky-Wrzaczek
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finl
| | - Jaakko Kangasjärvi
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finl
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20
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Barna B, Gémes K, Domoki M, Bernula D, Ferenc G, Bálint B, Nagy I, Fehér A. Arabidopsis NAP-related proteins (NRPs) contribute to the coordination of plant growth, developmental rate, and age-related pathogen resistance under short days. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2018; 267:124-134. [PMID: 29362091 DOI: 10.1016/j.plantsci.2017.11.006] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2017] [Revised: 10/30/2017] [Accepted: 11/13/2017] [Indexed: 06/07/2023]
Abstract
Plant nucleosome assembly protein-related proteins (NRPs) are histone chaperons involved in nucleosome turnover. Despite this basic cellular function, the Arabidopsis nrp1-1 nrp2-1 knock out mutant has been reported to exhibit only mild seedling root phenotypes and to significantly affect the expression of only few hundred genes Zhu et al. (2006). Here we report that NRP loss-of-function as well as the ectopic overexpression of At NRP1 significantly affected the growth, development, and the pathogen response of Arabidopsis plants under short day conditions. The nrp1-1 nrp2-1 mutant grew faster and flowered weeks earlier than the wild type and the overexpressor. The latter developed slower and flowered at a lower number of leaves than the mutant and the wild type. Moreover, the mutant was more sensitive, the overexpressor was more tolerant to pathogen-induced necrosis correlating with their more adult and juvenile character, respectively. Transcriptomic comparison of mature non-bolting plants agreed with the phenotypes. The presented and other published data indicate that although NRPs might not be absolutely required for normal plant growth and development, their level needs to be controlled to allow the epigenetic coordination of metabolic, growth, defence and developmental processes during the acclimation to unfavourable growth conditions such as short days.
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Affiliation(s)
- Balázs Barna
- Plant Protection Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, Herman Ottó út 15, 1022 Budapest, Hungary
| | - Katalin Gémes
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Hungary; Department of Plant Biology, University of Szeged, Közép fasor 52, H-6726 Szeged, Hungary
| | - Mónika Domoki
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Hungary
| | - Dóra Bernula
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Hungary
| | - Györgyi Ferenc
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Hungary
| | - Balázs Bálint
- SeqOmics Biotechnology Ltd, Vállalkozók útja 7, 6782 Mórahalom, Hungary
| | - István Nagy
- Institute of Biochemistry, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Hungary; SeqOmics Biotechnology Ltd, Vállalkozók útja 7, 6782 Mórahalom, Hungary
| | - Attila Fehér
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Hungary; Department of Plant Biology, University of Szeged, Közép fasor 52, H-6726 Szeged, Hungary.
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21
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Zhu X, Wang Y, Su Z, Lv L, Zhang Z. Silencing of the Wheat Protein Phosphatase 2A Catalytic Subunit TaPP2Ac Enhances Host Resistance to the Necrotrophic Pathogen Rhizoctonia cerealis. FRONTIERS IN PLANT SCIENCE 2018; 9:1437. [PMID: 30429858 PMCID: PMC6220131 DOI: 10.3389/fpls.2018.01437] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2018] [Accepted: 09/10/2018] [Indexed: 05/09/2023]
Abstract
Eukaryotic type 2A protein phosphatases (protein phosphatase 2A, PP2A) consist of a scaffold subunit A, a regulatory subunit B, and a catalytic subunit C. Little is known about the roles of PP2Ac proteins that are involved in plant responses to necrotrophic fungal pathogens. Sharp eyespot, caused by the necrotrophic fungus Rhizoctonia cerealis, is a destructive disease of wheat (Triticum aestivum), an important staple food crop. Here, we isolated TaPP2Ac-4D from wheat, which encodes a catalytic subunit of the heterotrimeric PP2A, and characterized its properties and role in plant defense response to R. cerealis. Based on the sequence alignment of TaPP2Ac-4D with the draft sequences of wheat chromosomes from the International Wheat Genome Sequencing Consortium (IWGSC), it was found that TaPP2Ac-4D gene is located on the long arm of the wheat chromosome 4D and has two homologs assigned on wheat chromosomes 4A and 4B. Sequence and phylogenetic tree analyses revealed that the TaPP2Ac protein is a typical member of the PP2Ac family and belongs to the subfamily II. TaPP2Ac-4B and TaPP2Ac-4D displayed higher transcriptional levels in the R. cerealis-susceptible wheat cultivar Wenmai 6 than those seen in the resistant wheat line CI12633. The transcriptional levels of TaPP2Ac-4B and TaPP2Ac-4D were significantly elevated in wheat R. cerealis after infection and upon H2O2 treatment. Virus-induced gene silencing results revealed that the transcriptional knockdown of TaPP2Ac-4D and TaPP2Ac-4B significantly increased wheat resistance to R. cerealis infection. Meanwhile, the transcriptional levels of certain pathogenesis-related (PR) and reactive oxygen species (ROS)-scavenging enzyme encoding genes were increased in TaPP2Ac-silenced wheat plants. These results suggest that TaPP2Ac-4B and TaPP2Ac-4D negatively regulate defense response to R. cerealis infection possibly through modulation of the expression of certain PR and ROS-scavenging enzyme genes in wheat. This study reveals a novel function of the plant PP2Ac genes in plant immune responses.
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Affiliation(s)
- Xiuliang Zhu
- The National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yuanyuan Wang
- Institute of Chemistry, Chinese Academy of Sciences, Beijing, China
| | - Zhenqi Su
- Institute for Cereal and Oil Crops, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang, China
| | - Liangjie Lv
- Institute for Cereal and Oil Crops, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang, China
| | - Zengyan Zhang
- The National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China
- *Correspondence: Zengyan Zhang,
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22
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Kim LW. Dual TORCs driven and B56 orchestrated signaling network guides eukaryotic cell migration. BMB Rep 2017; 50:437-444. [PMID: 28571594 PMCID: PMC5625690 DOI: 10.5483/bmbrep.2017.50.9.091] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2017] [Indexed: 11/20/2022] Open
Abstract
Different types of eukaryotic cells may adopt seemingly distinct modes of directional cell migration. However, several core aspects are regarded common whether the movement is either ameoboidal or mesenchymal. The region of cells facing the attractive signal is often termed leading edge where lamellipodial structures dominates and the other end of the cell called rear end is often mediating cytoskeletal F-actin contraction involving Myosin-II. Dynamic remodeling of cell-to-matrix adhesion involving integrin is also evident in many types of migrating cells. All these three aspects of cell migration are significantly affected by signaling networks of TorC2, TorC1, and PP2A/B56. Here we review the current views of the mechanistic understanding of these regulatory signaling networks and how these networks affect eukaryotic cell migration.
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Affiliation(s)
- Lou W Kim
- Department of Biological Sciences, Florida International University, Miami, FL 33199, USA
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23
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XU P, YONG B, SHAO HH, SHEN JB, HE B, MA QQ, YUAN XH, WANG Y. Cloning and characterization of a serine/threonine protein phosphatase2A-encoding gene IbPP2A1 from Ipomoea batatas (L.) Lam. Turk J Biol 2017. [DOI: 10.3906/biy-1604-94] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022] Open
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24
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Durian G, Rahikainen M, Alegre S, Brosché M, Kangasjärvi S. Protein Phosphatase 2A in the Regulatory Network Underlying Biotic Stress Resistance in Plants. FRONTIERS IN PLANT SCIENCE 2016; 7:812. [PMID: 27375664 PMCID: PMC4901049 DOI: 10.3389/fpls.2016.00812] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2016] [Accepted: 05/25/2016] [Indexed: 05/20/2023]
Abstract
Biotic stress factors pose a major threat to plant health and can significantly deteriorate plant productivity by impairing the physiological functions of the plant. To combat the wide range of pathogens and insect herbivores, plants deploy converging signaling pathways, where counteracting activities of protein kinases and phosphatases form a basic mechanism for determining appropriate defensive measures. Recent studies have identified Protein Phosphatase 2A (PP2A) as a crucial component that controls pathogenesis responses in various plant species. Genetic, proteomic and metabolomic approaches have underscored the versatile nature of PP2A, which contributes to the regulation of receptor signaling, organellar signaling, gene expression, metabolic pathways, and cell death, all of which essentially impact plant immunity. Associated with this, various PP2A subunits mediate post-translational regulation of metabolic enzymes and signaling components. Here we provide an overview of protein kinase/phosphatase functions in plant immunity signaling, and position the multifaceted functions of PP2A in the tightly inter-connected regulatory network that controls the perception, signaling and responding to biotic stress agents in plants.
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Affiliation(s)
- Guido Durian
- Department of Biochemistry, Molecular Plant Biology, University of TurkuTurku, Finland
| | - Moona Rahikainen
- Department of Biochemistry, Molecular Plant Biology, University of TurkuTurku, Finland
| | - Sara Alegre
- Department of Biochemistry, Molecular Plant Biology, University of TurkuTurku, Finland
| | - Mikael Brosché
- Department of Biochemistry, Molecular Plant Biology, University of TurkuTurku, Finland
| | - Saijaliisa Kangasjärvi
- Department of Biochemistry, Molecular Plant Biology, University of TurkuTurku, Finland
- *Correspondence: Saijaliisa Kangasjärvi,
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25
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Durian G, Rahikainen M, Alegre S, Brosché M, Kangasjärvi S. Protein Phosphatase 2A in the Regulatory Network Underlying Biotic Stress Resistance in Plants. FRONTIERS IN PLANT SCIENCE 2016. [PMID: 27375664 DOI: 10.3389/fpls.2016.00812/abstract] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Biotic stress factors pose a major threat to plant health and can significantly deteriorate plant productivity by impairing the physiological functions of the plant. To combat the wide range of pathogens and insect herbivores, plants deploy converging signaling pathways, where counteracting activities of protein kinases and phosphatases form a basic mechanism for determining appropriate defensive measures. Recent studies have identified Protein Phosphatase 2A (PP2A) as a crucial component that controls pathogenesis responses in various plant species. Genetic, proteomic and metabolomic approaches have underscored the versatile nature of PP2A, which contributes to the regulation of receptor signaling, organellar signaling, gene expression, metabolic pathways, and cell death, all of which essentially impact plant immunity. Associated with this, various PP2A subunits mediate post-translational regulation of metabolic enzymes and signaling components. Here we provide an overview of protein kinase/phosphatase functions in plant immunity signaling, and position the multifaceted functions of PP2A in the tightly inter-connected regulatory network that controls the perception, signaling and responding to biotic stress agents in plants.
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Affiliation(s)
- Guido Durian
- Department of Biochemistry, Molecular Plant Biology, University of Turku Turku, Finland
| | - Moona Rahikainen
- Department of Biochemistry, Molecular Plant Biology, University of Turku Turku, Finland
| | - Sara Alegre
- Department of Biochemistry, Molecular Plant Biology, University of Turku Turku, Finland
| | - Mikael Brosché
- Department of Biochemistry, Molecular Plant Biology, University of Turku Turku, Finland
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