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Hafeez S, Yaqoob S, Magray AR, Kamili AN, Ganai BA. Molecular characterization of fungal endophyte diversity isolated from Aconitum heterophyllum: a critically endangered medicinal plant of Kashmir Himalaya. Int Microbiol 2023:10.1007/s10123-023-00331-7. [PMID: 36738364 DOI: 10.1007/s10123-023-00331-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Revised: 01/04/2023] [Accepted: 01/24/2023] [Indexed: 02/05/2023]
Abstract
Aconitum heterophyllum is a rare perennial herb from Kashmir Himalayas. Due to its threatened status and dependence on its environment, the plant was examined for any potential endophytes, which is of utmost importance for bioprospection. In the current study, endophytic fungal diversity associated with A. heterophyllum was examined, and 328 fungal isolates were found in the plant's leaf, stem, and root tissues. Twelve (12) endophytic fungal species were identified utilizing, molecular analysis of the nuclear ribosomal DNA Internal Transcribes Spacer (ITS), rLSU, and rSSU sequences. Maximum likelihood analysis was used to determine the phylogenetic connection between each isolate. The genera Arthrinium, Chaetomium, Purpureocillium, Alternaria, Penicillium, Aspergillus, Cladosporium, and Bjerkandera species dominated the ascomycete and basidiomycete fungal endophytes.
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Affiliation(s)
- Sabira Hafeez
- Tissue Culture Laboratory, Centre of Research for Development, University of Kashmir, Hazratbal, Srinagar, Jammu and Kashmir, India, 190006.,Department of Environmental Studies, University of Kashmir, Hazratbal, Srinagar, Jammu and Kashmir, India, 190006
| | - Sabba Yaqoob
- Tissue Culture Laboratory, Centre of Research for Development, University of Kashmir, Hazratbal, Srinagar, Jammu and Kashmir, India, 190006.,Department of Environmental Studies, University of Kashmir, Hazratbal, Srinagar, Jammu and Kashmir, India, 190006
| | - Aqib Rehman Magray
- Biochemistry Laboratory, Centre of Research for Development, University of Kashmir, Hazratbal, Srinagar, Jammu and Kashmir, India, 190006.,Department of Zoology, Central University of Kashmir, Nunar Campus, Ganderbal, Jammu and Kashmir, India, 191201
| | - Azra N Kamili
- Department of Botany, Central University of Kashmir, Nunar Campus, Ganderbal, Jammu and Kashmir, India, 191201.
| | - Bashir Ahmad Ganai
- Biochemistry Laboratory, Centre of Research for Development, University of Kashmir, Hazratbal, Srinagar, Jammu and Kashmir, India, 190006.
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Jan S, Ahmad J, Dar MM, Wani AA, Tahir I, Kamili AN. Development and validation of a reverse phase HPLC-DAD method for separation, detection & quantification of rutin and quercetin in buckwheat ( Fagopyrum spp .). J Food Sci Technol 2022; 59:2875-2883. [PMID: 35734108 PMCID: PMC9206947 DOI: 10.1007/s13197-021-05312-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Revised: 05/25/2021] [Accepted: 11/04/2021] [Indexed: 06/15/2023]
Abstract
Buckwheat has tremendous nutraceutical potential owing to its rutin and quercetin content. The aim of this study was to optimise and validate an analytical method for separating and quantifying these two flavonoids from it. Factors, such as range, linearity, precision, accuracy, limit of detection and limit of quantification, were evaluated for the two compounds using high performance liquid chromatography. On the basis of resolution and symmetry, mobile phase consisting of methanol and methanol:water:acetic acid in the ratio of (100:150:5), flow rate 1.3 ml/min and column temperature 30 °C were found to be optimal analytical conditions. Calibration curves exhibited good linearity with correlation coefficient of 0.995 & 0.9907 over the range 60-180 μg/ml & 2-10 μg/ml for rutin and quercetin respectively. LOD and LOQ values for rutin and quercetin were 6.36, 0.58 and 19.28, 1.77 μg/ml respectively. Recovery values of 96-100.8% confirmed that the method was accurate for rutin and quercetin analysis. This validated method was successfully used to analyse rutin and quercetin in leaves and seeds of buckwheat plant.
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Affiliation(s)
- Sabbi Jan
- Cytogenetics & Plant Molecular Biology Laboratory, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir India
| | - Javaid Ahmad
- Cytogenetics & Plant Molecular Biology Laboratory, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir India
| | - Mohd Masarat Dar
- Department of Food Science & Technology, University of Kashmir, Srinagar, Jammu and Kashmir India
| | - Aijaz A. Wani
- Cytogenetics & Plant Molecular Biology Laboratory, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir India
| | - Inayatullah Tahir
- Plant Physiology and Biochemistry Research Laboratory, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir India
| | - Azra N. Kamili
- Centre of Research for Development (CORD), University of Kashmir, Srinagar, Jammu and Kashmir India
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Gulzar A, Hamid M, Dar FA, Wani SA, Malik AH, Kamili AN, Singh CP, Khuroo AA. Patterns of floristic and functional diversity in two treeline ecotone sites of Kashmir Himalaya. Environ Monit Assess 2022; 194:420. [PMID: 35543773 DOI: 10.1007/s10661-022-10044-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Accepted: 04/09/2022] [Indexed: 06/15/2023]
Abstract
Globally, the treelines at higher elevations in mountains are reported to be advancing up-slope in response to recent climate warming. However, little is known about the treeline advancement in the Himalaya due to paucity of baseline vegetation data with which to compare, thus making their assessment and monitoring challenging. To fill this knowledge gap, the present study documented floristic and functional diversity of two treeline ecotone sites in Kashmir Himalaya. At each site, we conducted field sampling by laying five 20-m2 plots, with one at the highest limit (T0 plot), two plots below and two above the treeline and two nested subplots of 5-m2 for shrubs and five 1-m2 for herbs in each plot. We recorded 97 plant species belonging to 33 families from the two sites. We observed a considerable difference in species composition and distribution along the treeline ecotone. Majority of the species reported were perennial herbs. We observed a significant association of growth forms with the particular plots along the treeline ecotone. At both the sites, we recorded highest species richness at the T0 plot which was correlated well with the functional traits, thus indicating convergence of floristic and functional diversity at this transition zone. Interestingly, the T0 plot at both the sites showed maximum overlap of species with the plots above and below the treeline. In an era of climate warming, our study provides crucial baseline data that will facilitate assessment and monitoring of the Himalayan treelines.
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Affiliation(s)
- Aadil Gulzar
- Centre for Biodiversity & Taxonomy, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir, 190 006, India
- Department of Environmental Science, University of Kashmir, Srinagar, Jammu and Kashmir, 190 006, India
| | - Maroof Hamid
- Centre for Biodiversity & Taxonomy, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir, 190 006, India
| | - Firdous A Dar
- Centre for Biodiversity & Taxonomy, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir, 190 006, India
| | - Sajad A Wani
- Centre for Biodiversity & Taxonomy, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir, 190 006, India
| | - Akhtar H Malik
- Centre for Biodiversity & Taxonomy, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir, 190 006, India
| | - Azra N Kamili
- Department of Environmental Science, University of Kashmir, Srinagar, Jammu and Kashmir, 190 006, India
- Department of Botany, Central University of Kashmir, Ganderbal, Jammu and Kashmir, 191 201, India
| | - C P Singh
- Space Applications Centre, Indian Space Research Organisation, Ahmedabad, 380 015, India
| | - Anzar Ahmad Khuroo
- Centre for Biodiversity & Taxonomy, Department of Botany, University of Kashmir, Srinagar, Jammu and Kashmir, 190 006, India.
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Hussain Mir A, Tyub S, Kamili AN. Ecology, distribution mapping and conservation implications of four critically endangered endemic plants of Kashmir Himalaya. Saudi J Biol Sci 2020; 27:2380-2389. [PMID: 32884420 PMCID: PMC7451753 DOI: 10.1016/j.sjbs.2020.05.006] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Revised: 04/03/2020] [Accepted: 05/03/2020] [Indexed: 11/27/2022] Open
Abstract
During the last few decades, human-driven activities have led to indiscriminate habitat destruction and exploitation of many plant species in Kashmir Himalaya. As a result, many species have become threatened and are struggling for survival. Of particular concern are the endemic and critically endangered species which have the highest risk of the extinction, hence warranting immediate conservation actions. Therefore the current study was carried out to understand the distribution, ecology and conservation implications of the four critically endangered endemic plants of Kashmir Himalaya. Habitat distribution modelling showed that the suitable potential areas for the species occurred from subalpine to alpine meadowlands with an elevational range of 1500-4600 m asl. The output of the MaxEnt model and field surveys have revealed that their highest potential distribution is in Panchari, Khrew, Ramnagar, Pahalgam, Gurez, Sonamarg, Gulmarg and Kishtwar forest ranges. Based on the field explorations and herbarium records, Saussurea costus (Falc.) Lipsch have 27 distribution areas, Gentiana kurroo Royle 18, Lilium polyphyllum D. Don 12 and Aconitum chasmanthum Stapf have 15. Precipitation of the driest month and annual mean temperature played an important role in the distribution of the studied species. The species started their lifecycle with the onset of the spring season, flowered in summer, fruit in autumn and senesce in the winter season. Under natural conditions, the number of days required for germination ranged from 180 to 210 where cold stratification played a pivotal role. Since last few decades, the populations of these species have been shrinking in their natural habitats due to over-exploitation for medicinal purposes and habitat destruction through amplified humanoid interferences like the expansion of agricultural land, road building, grazing and urbanization. Thus there is an urgent need to come up with positive strategies to save whatever is left and plan long term rescue measures not only to protect these species from extinction but also to reintroduce them along with framing the plans to supply sustained raw materials for medicine.
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Affiliation(s)
- Aabid Hussain Mir
- Centre of Research for Development, University of Kashmir, Hazratbal Srinagar 190006, India
| | - Sumira Tyub
- Centre of Research for Development, University of Kashmir, Hazratbal Srinagar 190006, India
| | - Azra N Kamili
- Centre of Research for Development, University of Kashmir, Hazratbal Srinagar 190006, India
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Shah D, Kamili AN, Wani AA, Majeed U, Wani ZA, Sajjad N, Ahmad P. Promoting the accumulation of scopolamine and hyoscyamine in Hyoscyamus niger L. through EMS based mutagenesis. PLoS One 2020; 15:e0231355. [PMID: 32437389 PMCID: PMC7241962 DOI: 10.1371/journal.pone.0231355] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2020] [Accepted: 03/21/2020] [Indexed: 11/18/2022] Open
Abstract
The overexploitation of medicinal plants is depleting gene pool at an alarming rate. In this scenario inducing the genetic variability through targeted mutations could be beneficial in generating varieties with increased content of active compounds. The present study aimed to develop a reproducible protocol for in vitro multiplication and mutagenesis of Hyoscyamus niger targeting putrescine N-methyltransferase (PMT) and 6β-hydroxy hyoscyamine (H6H) genes of alkaloid biosynthetic pathway. In vitro raised callus were treated with different concentrations (0.01% - 0.1%) of Ethyl Methane Sulfonate (EMS). Emerging multiple shoots and roots were obtained on the MS media supplemented with cytokinins and auxins. Significant effects on morphological characteristics were observed following exposure to different concentrations of EMS. EMS at a concentration of 0.03% was seen to be effective in enhancing the average shoot and root number from 14.5±0.30 to 22.2 ±0.77 and 7.2±0.12 to 8.8±0.72, respectively. The lethal dose (LD50) dose was calculated at 0.08% EMS. The results depicted that EMS has an intense effect on PMT and H6H gene expression and metabolite accumulation. The transcripts of PMT and H6H were significantly upregulated at 0.03-0.05% EMS compared to control. EMS treated explants showed increased accumulation of scopolamine (0.639 μg/g) and hyoscyamine (0.0344μg/g) compared to untreated.
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Affiliation(s)
- Durdana Shah
- Plant Tissue Culture Lab, Centre of Research for Development, University of Kashmir, Srinagar, J&K, India
- * E-mail: (DS); (PA)
| | - Azra N. Kamili
- Plant Tissue Culture Lab, Centre of Research for Development, University of Kashmir, Srinagar, J&K, India
| | - Aijaz A. Wani
- Cytogenetics and Reproductive Biology Lab, Department of Botany, University of Kashmir, Srinagar, J&K, India
| | - Umer Majeed
- Immunology Lab, Department of Biotechnology, University of Kashmir, Srinagar, J&K, India
| | - Zubair Ahmad Wani
- Immunology Lab, Department of Biotechnology, University of Kashmir, Srinagar, J&K, India
| | - Nasreena Sajjad
- Department of Biochemistry, University of Kashmir, Hazratbal, Jammu and Kashmir, India
| | - Parvaiz Ahmad
- King Saud University, Riyadh, Saudi Arabia
- Department of Botany and Microbiology, College of Science, Srinagar, Jammu and Kashmir, India
- * E-mail: (DS); (PA)
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Kashtwari M, Wani AA, Dhar MK, Jan S, Kamili AN. Development of an efficient in vitro mutagenesis protocol for genetic improvement of saffron ( Crocus sativus L.). Physiol Mol Biol Plants 2018; 24:951-962. [PMID: 30150869 PMCID: PMC6103935 DOI: 10.1007/s12298-018-0576-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2018] [Revised: 06/16/2018] [Accepted: 06/29/2018] [Indexed: 05/07/2023]
Abstract
Saffron (Crocus sativus L) is a triploid (2n = 3x = 24), sterile geophyte which can only be propagated by means of underground vegetative corms. Since corm multiplication does not induce genome variations, therefore, the entire saffron population is expected to have a similar genetic makeup. Keeping in view the economic importance of the plant and the factors responsible for its low yield, the present investigation has been undertaken to establish an in vitro ethyl methanesulfonate (EMS) mutagenesis protocol followed by characterization of the induced variability in the advanced generations. The present report is limited to standardization of in vitro mutagenesis protocol only. Among the mutagenic treatments tested, concentrations ranging from 0.1 to 0.5% EMS showed a varied survival of explants. Based on various growth parameters, the LD50 was calculated to be 0.3% EMS for 3 h. Among the two types of explants analyzed, the corm explant gave better results for in vitro survival and the growth parameters than callus explant. An average of 57.33 and 92.00 daughter cormlets in all EMS treatments as compared to 47.67 and 57.67 daughter cormlets in control, obtained from callus and corm explants respectively, were transferred to the field. The maximum, average daughter cormlet weight was obtained in control (3.01 g, corm explant) followed by 0.1% EMS (2.8 g, corm explant). In general, the growth parameters showed decreasing trend with an increase in EMS concentration in both the explants. The present study has been a significant achievement in the sense that the first mutagenesis protocol for C. sativus has been standardized.
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Affiliation(s)
- Mahpara Kashtwari
- Cytogenetics and Reproductive Biology Laboratory, Department of Botany, University of Kashmir, Srinagar, 190006 India
| | - Aijaz A. Wani
- Cytogenetics and Reproductive Biology Laboratory, Department of Botany, University of Kashmir, Srinagar, 190006 India
| | - Manoj K. Dhar
- Plant Genomics Laboratory, School of Biotechnology, University of Jammu, Jammu, 180006 India
| | - Sabbi Jan
- Cytogenetics and Reproductive Biology Laboratory, Department of Botany, University of Kashmir, Srinagar, 190006 India
| | - Azra N. Kamili
- Department of Environmental Science, Centre of Research for Development, University of Kashmir, Srinagar, J&K 190006 India
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Ali S, Ganai BA, Kamili AN, Bhat AA, Mir ZA, Bhat JA, Tyagi A, Islam ST, Mushtaq M, Yadav P, Rawat S, Grover A. Pathogenesis-related proteins and peptides as promising tools for engineering plants with multiple stress tolerance. Microbiol Res 2018; 212-213:29-37. [PMID: 29853166 DOI: 10.1016/j.micres.2018.04.008] [Citation(s) in RCA: 257] [Impact Index Per Article: 42.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2018] [Revised: 04/17/2018] [Accepted: 04/25/2018] [Indexed: 12/13/2022]
Abstract
Pathogenesis-related (PR) proteins and antimicrobial peptides (AMPs) are a group of diverse molecules that are induced by phytopathogens as well as defense related signaling molecules. They are the key components of plant innate immune system especially systemic acquired resistance (SAR), and are widely used as diagnostic molecular markers of defense signaling pathways. Although, PR proteins and peptides have been isolated much before but their biological function remains largely enigmatic despite the availability of new scientific tools. The earlier studies have demonstrated that PR genes provide enhanced resistance against both biotic and abiotic stresses, which make them one of the most promising candidates for developing multiple stress tolerant crop varieties. In this regard, plant genetic engineering technology is widely accepted as one of the most fascinating approach to develop the disease resistant transgenic crops using different antimicrobial genes like PR genes. Overexpression of PR genes (chitinase, glucanase, thaumatin, defensin and thionin) individually or in combination have greatly uplifted the level of defense response in plants against a wide range of pathogens. However, the detailed knowledge of signaling pathways that regulates the expression of these versatile proteins is critical for improving crop plants to multiple stresses, which is the future theme of plant stress biology. Hence, this review provides an overall overview on the PR proteins like their classification, role in multiple stresses (biotic and abiotic) as well as in various plant defense signaling cascades. We also highlight the success and snags of transgenic plants expressing PR proteins and peptides.
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Affiliation(s)
- Sajad Ali
- National Research Centre on Plant Biotechnology, Pusa Campus, New Delhi, India; Centre of Research for Development, University of Kashmir, Jammu and Kashmir, India
| | - Bashir Ahmad Ganai
- Centre of Research for Development, University of Kashmir, Jammu and Kashmir, India
| | - Azra N Kamili
- Centre of Research for Development, University of Kashmir, Jammu and Kashmir, India
| | - Ajaz Ali Bhat
- Govt Degree College Boys Baramulla, Jammu and Kashmir, India
| | - Zahoor Ahmad Mir
- National Research Centre on Plant Biotechnology, Pusa Campus, New Delhi, India
| | | | - Anshika Tyagi
- National Research Centre on Plant Biotechnology, Pusa Campus, New Delhi, India
| | | | | | - Prashant Yadav
- National Research Centre on Plant Biotechnology, Pusa Campus, New Delhi, India
| | - Sandhya Rawat
- National Research Centre on Plant Biotechnology, Pusa Campus, New Delhi, India
| | - Anita Grover
- National Research Centre on Plant Biotechnology, Pusa Campus, New Delhi, India.
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Shameem N, Kamili AN, Ahmad M, Masoodi F, Parray JA. Antimicrobial activity of crude fractions and morel compounds from wild edible mushrooms of North western Himalaya. Microb Pathog 2017; 105:356-360. [DOI: 10.1016/j.micpath.2017.03.005] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2017] [Revised: 03/01/2017] [Accepted: 03/06/2017] [Indexed: 10/20/2022]
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Shafi S, Kamili AN, Shah MA, Bandh SA, Dar R. Dynamics of bacterial class Bacilli in the deepest valley lake of Kashmir-the Manasbal Lake. Microb Pathog 2017; 104:78-83. [DOI: 10.1016/j.micpath.2017.01.018] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2016] [Revised: 01/07/2017] [Accepted: 01/10/2017] [Indexed: 10/20/2022]
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Bandh SA, Kamili AN, Ganai BA, Lone BA. Assessment of species richness in Lake Dal, Kashmir, based on classical approach, physiological approach and rDNA ITS sequences from isolates. Microb Pathog 2017; 104:303-309. [PMID: 28161358 DOI: 10.1016/j.micpath.2017.01.058] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2017] [Revised: 01/30/2017] [Accepted: 01/31/2017] [Indexed: 10/20/2022]
Abstract
As a first description to document the species richness in Dal Lake, a freshwater lake ecosystem in Kashmir valley, an extensive network of sixteen sampling stations with distinguishing features was sampled seasonally for two years. The identification process yielded fifty-one species probably first and new records for this area to date. The taxonomic groups observed were those with species from Ascomycetes (inclusive of yeasts), Basidiomycetes, Blastocladiomycetes, Zygomycetes, and Peronosporomycetes. Each phylum was represented by a single Order, with the exception of the Peronosporomycetes, which was represented by two Orders- Saprolegniales and Pythiales. In the filamentous fungal group, family Trichocomaceae was dominant followed by Saccharomycetaceae, Mucoraceae, Nectriaceae, Tremellaceae and Hypocreaceae. However, in the group of zoosporic & fungal like eukaryotes, family Saprolegniaceae was most dominant followed by Blastocladiaceae and Pythiaceae. A dramatic decrease in fungal load was observed in different seasons with highest colonial load in the summer season and lowest in the winter season. The observed distribution was statistically significant for both the filamentous fungal species (p < 0.01) as well as zoosporic fungi & fungal like eukaryotes (p < 0.05). In order to assess biodiversity patterns of fungi more accurately, it is necessary to repeat such investigations in other areas and to improve the tools for taxonomic identification of these highly diverse but mostly microscopic organisms.
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Affiliation(s)
- Suhaib A Bandh
- Microbiology Research Laboratory, Centre of Research for Development/Department of Environmental Science, University of Kashmir, Srinagar, India.
| | - Azra N Kamili
- Microbiology Research Laboratory, Centre of Research for Development/Department of Environmental Science, University of Kashmir, Srinagar, India
| | - Bashir A Ganai
- Microbiology Research Laboratory, Centre of Research for Development/Department of Environmental Science, University of Kashmir, Srinagar, India
| | - Bashir A Lone
- Parasitology Research Laboratory, Centre of Research for Development/Department, University of Kashmir, Srinagar, India
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Malik TA, Kamili AN, Chishti MZ, Ahad S, Tantry MA, Hussain PR, Johri RK. Breaking the resistance of Escherichia coli: Antimicrobial activity of Berberis lycium Royle. Microb Pathog 2016; 102:12-20. [PMID: 27888048 DOI: 10.1016/j.micpath.2016.11.011] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2016] [Accepted: 11/21/2016] [Indexed: 11/19/2022]
Abstract
The antimicrobial activity of root bark of Berberis lycium and its principal component berberine was tested against a panel of microbial strains using agar well diffusion test and further analyzed using micro-broth dilution method. Preliminary analysis, on the basis of zone of Inhibition (ZOI) showed that the methanolic extract of B. lycium was highly effective against Escherichia coli (ZOI 41 ± 1 mm). Among the bacterial strains E. coli was found to be most susceptible and among fungi Candida albicans was the most susceptible for berberine as well as the crude methanolic extract of the plant. Methanolic extract of the plant was more effective for E. coli (MIC 1.7 ± 1.18; MBC 2.4 ± 1.18) than berberine (MIC 3.5 ± 0.57) (p < 0.05), whereas berberine was more effective than crude extracts for C. albicans. In addition, E. coli showed the development of resistant colonies after 72 h when tested with berberine but the development of such colonies was not observed with the methanolic extract of the plant. This could be due to the presence of resistance breaking molecules in the crude methanolic extract of B. lycium. Also the MIC index of crude methanolic extract was 1.39 for E. coli, which showed the mode of action to be bactericidal. HPLC analysis revealed the presence of berberine at highest concentration in methanolic extract of the plant, followed by aqueous extract. Potentiation of this berberine by resistance breaking molecules in the crude extract could be a possible explanation for its strong effectiveness.
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Affiliation(s)
- Tauseef Ahmad Malik
- Centre of Research for Development, University of Kashmir, Srinagar, J&K, India.
| | - Azra N Kamili
- Centre of Research for Development, University of Kashmir, Srinagar, J&K, India
| | - M Z Chishti
- Centre of Research for Development, University of Kashmir, Srinagar, J&K, India
| | - Shazia Ahad
- Department of Zoology, University of Kashmir, Srinagar, J&K, India
| | - Mudasir A Tantry
- Centre of Research for Development, University of Kashmir, Srinagar, J&K, India
| | - P R Hussain
- Astrophysical Sciences Division, Nuclear Research Laboratory, BARC, Zakura, Srinagar, J&K, India
| | - R K Johri
- PK-PD Toxicology Division, Indian Institute of Integrative Medicine (CSIR), Jammu-Tawi, J&K, India
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Shameem N, Kamili AN, Ahmad M, Masoodi FA, Parray JA. Antioxidant Potential and DNA Damage Protection by the Slate Grey Saddle Mushroom, Helvella lacunosa (Ascomycetes), from Kashmir Himalaya (India). Int J Med Mushrooms 2016; 18:631-6. [PMID: 27649731 DOI: 10.1615/intjmedmushrooms.v18.i7.80] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
This study pertains to the radical scavenging potential of and DNA protection by Helvella lacunosa, an edible mushroom from Kashmir Himalaya (India). Different solvents, on the basis of their polarities, were used to extract all solvent-soluble bioactive compounds. Seven different antioxidant methods were also used to determine extensive radical scavenging activity. The mushroom ethanol extract and butanol extract showed effective scavenging activity of radicals at 95% and 89%, respectively. At 800 µg/mg, the ethanol extract was potent enough to protect DNA from degradation by hydroxyl radicals. It is evident from these findings that the presence of antioxidant substances signifies the use of H. lacunosa as food in the mountainous valleys of the Himalayan region.
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Affiliation(s)
- Nowsheen Shameem
- Centre of Research for Development, University of Kashmir, Srinagar, Jammu and Kashmir, India
| | - Azra N Kamili
- Centre of Research for Development, University of Kashmir, Srinagar, Jammu and Kashmir, India
| | - Mushtaq Ahmad
- SKUAST-K, Shalimar Srinagar, Jammu and Kashmir, India
| | | | - Javid A Parray
- Centre of Research for Development, University of Kashmir, Srinagar, Jammu and Kashmir, India
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Mehraj SS, Kamili AN, Nazir R, Haq E, Balkhi HM. Comparative evaluation of extraction methods for total proteins from Crocus sativus L . ( Saffron). Saudi J Biol Sci 2016; 25:1603-1608. [PMID: 30591776 PMCID: PMC6303140 DOI: 10.1016/j.sjbs.2016.04.011] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2015] [Revised: 04/08/2016] [Accepted: 04/16/2016] [Indexed: 11/30/2022] Open
Abstract
Broadly speaking proteomic studies are one of the various techniques of utmost importance for understanding complex biological processes that occur under inductive conditions and revealing the multidimensional aspects of Crocus sativus in biological systems. In order to get an insight into the molecular changes and to characterize the variations in protein expression of C. sativus, a detailed proteomic analysis on one-dimensional gel electrophoresis is one of the basic steps to accomplish. We have compared total protein profiles of C. sativus extracted by three different recipes and analyzed on 10% sodium dodecyl sulfate polyacrylamide gels. Gels were subjected to densitometric analysis for further characterization. Among three different protocols NP-40 extraction buffer recipe resulted in the extraction of proteins most efficiently with minimum background and streaking. There was maximum solubilization of proteins with high efficiency. Such a profile can be used for high precision analysis of differential protein expression. This work is an attempt to assist researchers in effective extraction of proteins from C. sativus. As a researcher faces a perplexing array of choices as where to start we describe a method based on our collective analysis of the different protein protocols. This paper presents a method that could be applied at the outset of any proteomic study.
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Affiliation(s)
- Syed Sana Mehraj
- Centre of Research for Development, University of Kashmir, Srinagar, J&K 190006, India
- Corresponding author.
| | - Azra N. Kamili
- Centre of Research for Development, University of Kashmir, Srinagar, J&K 190006, India
| | - Ruqeya Nazir
- Centre of Research for Development, University of Kashmir, Srinagar, J&K 190006, India
| | - Ehtishamul Haq
- Department of Biotechnology, University of Kashmir, Srinagar, J&K 190006, India
| | - Henah Mehraj Balkhi
- Department of Biotechnology, University of Kashmir, Srinagar, J&K 190006, India
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Kuchy AH, Wani AA, Kamili AN. Cytogenetic effects of three commercially formulated pesticides on somatic and germ cells of Allium cepa. Environ Sci Pollut Res Int 2016; 23:6895-906. [PMID: 26670031 DOI: 10.1007/s11356-015-5912-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2015] [Accepted: 12/02/2015] [Indexed: 05/02/2023]
Abstract
Cytological effects of Endosri-ES (endosulfan), Nuvan-NU (dichlorvos), and Kvistin-KS (carbendazim) were evaluated on mitotic and meiotic cells of Allium cepa. Test concentrations were chosen by calculating EC50 values of formulated ES, NU, and KS, which turned to be 60, 200, and 500 ppm (parts per million), respectively. Cytological studies were undertaken on root meristem cells of A. cepa using EC50, 1/2 × EC50, and 2 × EC50 of these pesticides for 24 and 48 h. Similarly, a meiotic study was conducted by applying the pesticides at the aforesaid concentrations from seedling to bud stage. A set of onion bulbs exposed to tap water was run parallel for negative control and maleic hydrazide (112.09 ppm) as positive control. During the study period, mitotic index (MI) decreased at all the pesticide concentrations compared to the negative control. Among various chromosomal aberrations, chromatin bridges, breaks, stickiness, laggard, vagrant chromosomes, fragments, C-mitosis, multipolarity, ring chromosome as well as micronuclei were observed in mitotic preparations. In contrast, meiotic aberrations revealed comparatively less frequency of chromosomal aberrations and the most frequent were lagging chromosome, stray bivalents, secondary association, chromatin bridge, disturbed anaphase, and stickiness. Comparative analysis of the pesticides showed that NU was highly toxic to plant cells than KS, while as ES showed intermediate effects between the two. Further, our study revealed that all the three pesticides produce genotoxic effects which can cause health risks to the human populations. Graphical Abstract ᅟ.
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Affiliation(s)
- Aashiq H Kuchy
- Department of Environmental Science/Centre of Research for Development, University of Kashmir, Srinagar (J&K), 190006, India.
| | - Aijaz A Wani
- Department of Botany, University of Kashmir, Srinagar (J&K), 190006, India
| | - Azra N Kamili
- Department of Environmental Science/Centre of Research for Development, University of Kashmir, Srinagar (J&K), 190006, India.
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Tantry MA, Irtiza S, A. Bhat G, Ahmad M, Ganaie HA, Ganai BA, Kamili AN, Akbar S. Antioxidant and Anti-inflammatory Activities of Platanus orientalis: An Oriental Plant Endemic to Kashmir Planes. ACTA ACUST UNITED AC 2016. [DOI: 10.5567/pharmacologia.2016.217.222] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Malik TA, Kamili AN, Chishti MZ, Tanveer S, Ahad S, Johri RK. Synergistic approach for treatment of chicken coccidiosis using berberine--A plant natural product. Microb Pathog 2016; 93:56-62. [PMID: 26802524 DOI: 10.1016/j.micpath.2016.01.012] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2015] [Accepted: 01/19/2016] [Indexed: 10/22/2022]
Abstract
Despite the advent of anticoccidial drugs and vaccines, coccidiosis continues to result in substantial economic losses to the poultry industry. Berberine, a natural alkaloid is well known in studies involving synergistic approaches, thereby reducing the dosage of principal drugs. Therefore, a study was designed to see whether a synergistic anticoccidial effect could be obtained between amprolium and berberine, in vivo using broiler chicken. Anticoccidial activity was measured in comparison to the reference drug amprolium on the basis of oocyst output reduction, mean weight gain and feed conversion ratio. Oocyst output was measured using Mc-Masters counting technique. Different combinations of berberine and amprolium were tested and out of which 1:1 ratio was the most effective for controlling these parasites. Oral gavaging of 100(50 + 50) mg/kg body weight of 1:1 ratio of amprolium and berberine caused the equivalent reduction in number of oocysts (38.85 ± 9.61) one day prior to that of standard drug amprolium (49.95 ± 16.65) as well as pure berberine (44.4 ± 9.61) used in the study. Weight gain of birds was also highest in the synergistic group (1547.43 ± 12.86) among all the infected groups. Besides feed conversion ratio in the synergistic group was also better (1.387 ± 0.026). The results of this study proved the effectiveness of both amprolium and berberine and revealed synergism between amprolium and berberine against coccidian oocysts, confirmed by significant reduction in the number of coccidian oocysts shed in the feces, leading to better weight gain and improved feed conversion ratio. The study deep-rooted the synergistic potential of berberine, a natural bioactive compound for controlling a protozoan parasite and the results of this study corroborate with its use for treatment of severe diarrhoea, amoebiasis and intestinal infections.
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Affiliation(s)
- Tauseef Ahmad Malik
- Centre of Research for Development, University of Kashmir, Srinagar 190006, J&K, India.
| | - Azra N Kamili
- Centre of Research for Development, University of Kashmir, Srinagar 190006, J&K, India
| | - M Z Chishti
- Centre of Research for Development, University of Kashmir, Srinagar 190006, J&K, India
| | - Syed Tanveer
- Department of Zoology, University of Kashmir, Srinagar 190006, J&K, India
| | - Shazia Ahad
- Department of Zoology, University of Kashmir, Srinagar 190006, J&K, India
| | - R K Johri
- PK-PD Toxicology Division, Indian Institute of Integrative Medicine (CSIR), Jammu-Tawi, J&K, India
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H Dar G, Kamili AN. Characterization of Aeromonas sobria Isolated from Fish Rohu (Labeo rohita) Collected from Polluted Pond. ACTA ACUST UNITED AC 2016. [DOI: 10.4172/2155-9597.1000273] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Dar GH, Dar SA, Kamili AN, Chishti MZ, Ahmad F. Detection and characterization of potentially pathogenic Aeromonas sobria isolated from fish Hypophthalmichthys molitrix (Cypriniformes: Cyprinidae). Microb Pathog 2015; 91:136-40. [PMID: 26518124 DOI: 10.1016/j.micpath.2015.10.017] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2015] [Accepted: 10/23/2015] [Indexed: 10/22/2022]
Abstract
The current study focuses on the detection and characterization of potentially pathogenic Aeromonas sobria from fish silver carp (Hypophthalmichthys molitrix). Assessment of clinical, microbiological, pathological and biochemical characteristics of A. sobria were taken into account in order to understand the epidemiology, frequency and occurrence of this infection. Clinically the infected fish (H. molitrix) was observed for various types of symptoms. A total of 33 colonies of A. sobria strain were isolated from 20 cultured H. molitrix, collected from controlled fish pond. Microscopic examination revealed that the strains were rod-shaped, Gram negative bacteria. The revealed percent probability identification of A. sobria from the biochemical characterization in VITEK system was 93% with gram negative (GN) card. The histopathology of Gills caused by this bacterium, A. sobria indicate haemorrhagic gill epithelia and epithelial hyperplasia. Lamelar epithelial hypertrophy and hyperplasia with degenerative changes of the epithelium and hypertrophic epitheliocystis infected cells on gills of H. molitrix were observed during the present study.
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Affiliation(s)
- Gowhar H Dar
- Department of Environmental Science, University of Kashmir, Srinagar 190006, India; Centre of Research for Development, University of Kashmir, Srinagar 190006, India.
| | - Shoaib A Dar
- Department of Zoology and Environmental Sciences, Punjabi University, Patialia 147002, India
| | - Azra N Kamili
- Centre of Research for Development, University of Kashmir, Srinagar 190006, India
| | - Mohammad Z Chishti
- Centre of Research for Development, University of Kashmir, Srinagar 190006, India
| | - Fayaz Ahmad
- Department of Zoology, University of Kashmir, Srinagar 190006, India
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Dar GH, Kamili AN, Nazir R, Bandh SA, Jan TR, Chishti MZ. Enhanced production of α-amylase by Penicillium chrysogenum in liquid culture by modifying the process parameters. Microb Pathog 2015. [PMID: 26220910 DOI: 10.1016/j.micpath.2015.07.016] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
In this paper, we have assessed the role of changing physicochemical parameters and substrate types on the production of α-amylase enzyme from Penicillium chrysogenum, with a view to determining the optimal conditions required for its maximum production. The findings of this research revealed that, at pH 6 using linseed oil cake as substratum, α-amylase enzyme production was maximum (550.0 U/mL), when the fungi was incubated for 6 days at 30 °C in 0.1 M acetate buffer. Further, reasonably good production of the α-amylase enzyme was also observed at pH 9 with all the experimented carbon sources as substrates. Moreover, statistical analysis, using analysis of variance (ANOVA) carried out to study the impact of different studied parameters on the α-amylase enzyme production revealed that incubation period of 6-18 days is highly significant (p = 0.01) factor in amylotic activity of the P. chrysogenum. Under the researched out optimal conditions, P. chrysogenum is an economically viable option for the industrial and biotechnological production of α-amylase enzyme.
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Affiliation(s)
- Gowhar H Dar
- Department of Environmental Science, University of Kashmir, Srinagar 190006, India; Centre of Research for Development, University of Kashmir, Srinagar 190006, India.
| | - Azra N Kamili
- Centre of Research for Development, University of Kashmir, Srinagar 190006, India
| | - Ruqeya Nazir
- Centre of Research for Development, University of Kashmir, Srinagar 190006, India
| | - Suhaib A Bandh
- Centre of Research for Development, University of Kashmir, Srinagar 190006, India
| | - Tariq R Jan
- Department of Statistics, University of Kashmir, Srinagar 190006, India
| | - Mohammad Z Chishti
- Centre of Research for Development, University of Kashmir, Srinagar 190006, India
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Jan S, Kamili AN, Parray JA, Bedi YS. Differential response of terpenes and anthraquinones derivatives in Rumex dentatus and Lavandula officinalis to harsh winters across north-western Himalaya. Nat Prod Res 2015; 30:608-12. [PMID: 25868521 DOI: 10.1080/14786419.2015.1030404] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
Herbs adapted to diverse climates exhibit distinct variability to fluctuating temperatures and demonstrate various metabolic and physiological adaptations to harsh environments. In this research, Rumex dentatus L. and Lavandula officinalis L. were collected before snowfall in September-November to evaluate variability in major phytoconstituents to diverse seasonal regime. LC-MS was used for simultaneous determination of eight anthraquinone derivatives in R. dentatus, i.e. emodin, physcion, chrysophanol, physcion glucoside, endocrocin, emodin glucoside, chrysophanol glucoside and chromone derivatives and monoterpenes in L. officinalis i.e. (Z)-β-ocimene, (E)-β-ocimene, terpene alcohol, terpin-4-ol, acetate ester-linalyl acetate and bicyclic sesquiterpene (E)-caryophyllene. The correlation analysis confirmed significant variation in anthraquinone glucoside and terpene content within Rumex and Lavender, respectively, and altitude was established as the determinant factor in secondary metabolism of both herbs. The study concludes the propagation of herbs in bioclimatic belts which favour accumulation of major constituents and validate their greater pharmacological activity.
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Affiliation(s)
- Sumira Jan
- a Centre of Research for Development , University of Kashmir , Srinagar 190 006 , India
| | - Azra N Kamili
- a Centre of Research for Development , University of Kashmir , Srinagar 190 006 , India
| | - Javid A Parray
- a Centre of Research for Development , University of Kashmir , Srinagar 190 006 , India
| | - Yashbir S Bedi
- b Plant Biotechnology Division, CSIR - Indian Institute of Integrative Medicine , Canal Road, Jammu 180 001 , India
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21
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Nisa H, Kamili AN, Nawchoo IA, Shafi S, Shameem N, Bandh SA. Fungal endophytes as prolific source of phytochemicals and other bioactive natural products: A review. Microb Pathog 2015; 82:50-9. [PMID: 25865953 DOI: 10.1016/j.micpath.2015.04.001] [Citation(s) in RCA: 169] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2014] [Revised: 03/09/2015] [Accepted: 04/08/2015] [Indexed: 10/23/2022]
Abstract
Endophytic fungi are those that live internally in apparently healthy and asymptomatic hosts. Endophytic fungi appear to be ubiquitous; indeed, no study has yet shown the existence of a plant species without endophytes. High species diversity is another characteristic of endophytic mycobiota which is depicted by the fact that it is quite common for endophyte surveys to find assemblages consisting of more than 30 fungal species per host plant species. Medicinal plants had been used to isolate and characterize directly the bioactive metabolites. However, the discovery of fungal endophytes inside these plants with capacity to produce the same compounds shifted the focus of new drug sources from plants to fungi. Bioactive natural products from endophytic fungi, isolated from different plant species, are attracting considerable attention from natural product chemists and biologists alike which is clearly depicted by the steady increase of publications devoted to this topic during the recent years. This review will highlight the chemical potential of endophytic fungi with focus on the detection of pharmaceutically valuable plant constituents as products of fungal biosynthesis. In addition, it will cover newly discovered endophytic fungi and also new bioactive metabolites reported in recent years from fungal endophytes. It summarizes the up-to-date and comprehensive information on bioactive compounds from endophytic fungi by having done a thorough survey of literature.
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Affiliation(s)
- Humeera Nisa
- Centre of Research for Development and Department of Environmental Sciences, University of Kashmir, Srinagar 190006, India.
| | - Azra N Kamili
- Centre of Research for Development and Department of Environmental Sciences, University of Kashmir, Srinagar 190006, India
| | - Irshad A Nawchoo
- Department of Botany, University of Kashmir, Srinagar 190006, India
| | - Sana Shafi
- Centre of Research for Development and Department of Environmental Sciences, University of Kashmir, Srinagar 190006, India
| | - Nowsheen Shameem
- Centre of Research for Development and Department of Environmental Sciences, University of Kashmir, Srinagar 190006, India
| | - Suhaib A Bandh
- Centre of Research for Development and Department of Environmental Sciences, University of Kashmir, Srinagar 190006, India
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Bhat GA, Mir F, Shawl AS, Ganai BA, Kamili AN, Masood A, Tantry MA. Crocetenone, a new rotenoid with an unusual trans-fused ring system from Iris crocea. Nat Prod Commun 2015; 10:503-504. [PMID: 25924539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023] Open
Abstract
Crocetenone, a new rotenoid (1), along with five known compounds apocyanin (2), tectorigenin (3), 5,2',3'-trihydroxy-7-methoxy flavanone (4), tectoridin (5) and tectoridin glycoside (6), were isolated from the methanolic extract of the root of Iris crocea. The structure of compounds was elucidated on the basis of 1D- and 2D-NMR spectroscopic and MS analysis. Antibacterial and antioxidant activities of compounds 1-6 were evaluated. Crocetenone (1) showed a prominent antibacterial activity.
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Bhat GA, Mir F, Shawl AS, Ganai BA, Kamili AN, Masood A, Tantry MA. Crocetenone, a New Rotenoid with an Unusual trans-fused Ring System from Iris crocea. Nat Prod Commun 2015. [DOI: 10.1177/1934578x1501000331] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Crocetenone, a new rotenoid (1), along with five known compounds apocyanin (2), tectorigenin (3), 5,2′,3′-trihydroxy-7-methoxy flavanone (4), tectoridin (5) and tectoridin glycoside (6), were isolated from the methanolic extract of the root of Iris crocea. The structure of compounds was elucidated on the basis of 1D- and 2D-NMR spectroscopic and MS analysis. Antibacterial and antioxidant activities of compounds 1-6 were evaluated. Crocetenone (1) showed a prominent antibacterial activity.
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Affiliation(s)
- Gulzar A. Bhat
- Natural Products Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Srinagar, Kashmir 190005, India
- Department of Biochemistry, University of Kashmir, Srinagar, Kashmir 190006, India
| | - Fauzia Mir
- Natural Products Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Srinagar, Kashmir 190005, India
| | - Abdul S. Shawl
- Natural Products Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Srinagar, Kashmir 190005, India
| | - Bashir A. Ganai
- Department of Biochemistry, University of Kashmir, Srinagar, Kashmir 190006, India
- Phytochemistry Laboratories, Centre of Research for Development, University of Kashmir, Srinagar, Kashmir 190006, India
| | - Azra N. Kamili
- Phytochemistry Laboratories, Centre of Research for Development, University of Kashmir, Srinagar, Kashmir 190006, India
| | - Akbar Masood
- Department of Biochemistry, University of Kashmir, Srinagar, Kashmir 190006, India
| | - Mudasir A. Tantry
- Phytochemistry Laboratories, Centre of Research for Development, University of Kashmir, Srinagar, Kashmir 190006, India
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Tantry MA, Bhat GA, Idris A, Dar JA, Yousef Al Omar S, Masoodi KZ, Ganai BA, Kamili AN, Shawl AS. Sulfated Triterpenes from Lemon Balm. Helv Chim Acta 2014. [DOI: 10.1002/hlca.201400001] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Parray JA, Kamili AN, Hamid R, Reshi ZA, Qadri RA. Antibacterial and antioxidant activity of methanol extracts ofCrocus sativusL.c.v. Kashmirianus. Frontiers in Life Science 2014. [DOI: 10.1080/21553769.2014.951774] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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26
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Malik TA, Kamili AN, Chishti MZ, Tanveer S, Ahad S, Johri RK. In vivo anticoccidial activity of berberine [18, 5,6-dihydro-9,10-dimethoxybenzo(g)-1,3-benzodioxolo(5,6-a) quinolizinium]--an isoquinoline alkaloid present in the root bark of Berberis lycium. Phytomedicine 2014; 21:663-669. [PMID: 24411651 DOI: 10.1016/j.phymed.2013.11.005] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2013] [Revised: 10/11/2013] [Accepted: 11/28/2013] [Indexed: 06/03/2023]
Abstract
Coccidiosis, caused by various Eimeria species, is a major parasitic disease in chicken. However the increasing resistance of these parasites to currently used anticoccidial drugs has stimulated the search for new methods of control. As part of this effort we investigated the root bark of Berberis lycium (barberry) as a potential source of compounds with anticoccidial activity. In the present study anticoccidial activity of different solvent extracts of the root bark of B. lycium and berberine was evaluated in vivo using broiler chicken. Results of the study demonstrated equipotent efficacy of pure berberine in comparison to that of standard drug amprolium on the basis of reduction in coccidian oocyst output, body weight gain of chicken and feed conversion ratio. Among the extracts crude methanolic extract showed highest anticoccidial activity tested at 300 mg/kg body weight which could be due to the presence of alcohol-soluble active ingredients in root bark of B. lycium. Toxicological studies revealed that B. lycium extracts as well as berberine were not lethal up to dosage of 2000 mg/kg body weight. LD(50) was not determined as mortalities were not recorded in any of the five groups of chicken. From the present study it can be concluded that root bark of B. lycium has the immense potential to contribute to the control of coccidian parasites of chicken. Our results corroborate the use of berberine for treatment of severe diarrhoea, amoebiasis and intestinal infections and could justify its use in folk medicine for treatment of haemorrhagic dysentery.
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Affiliation(s)
- Tauseef Ahmad Malik
- Centre of Research for Development, University of Kashmir, Srinagar 190006, Jammu & Kashmir, India.
| | - Azra N Kamili
- Centre of Research for Development, University of Kashmir, Srinagar 190006, Jammu & Kashmir, India
| | - M Z Chishti
- Centre of Research for Development, University of Kashmir, Srinagar 190006, Jammu & Kashmir, India
| | - Syed Tanveer
- Department of Zoology, University of Kashmir, Srinagar 190006, Jammu & Kashmir, India
| | - Shazia Ahad
- Department of Zoology, University of Kashmir, Srinagar 190006, Jammu & Kashmir, India
| | - R K Johri
- PK-PD Toxicology Division, Indian Institute of Integrative Medicine (CSIR), Jammu-Tawi, India
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Bhat RA, Nazir R, Ashraf S, Ali M, Bandh SA, Kamili AN. Municipal solid waste generation rates and its management at Yusmarg forest ecosystem, a tourist resort in Kashmir. Waste Manag Res 2014; 32:165-169. [PMID: 24519231 DOI: 10.1177/0734242x13518089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
The present study was carried out at Yusmarg, a forest ecosystem and tourist resort, in the Kashmir valley during 2012 with the objectives of determining the municipal solid waste (MSW) generation rates per capita and on a daily basis, and assessing the existing MSW system. It was estimated that daily generation of MSW at Yusmarg by tourists, as well as residents, was 107.74 kg; on average, the MSW generated at each site was about 36.48 kg/day. The per capita generation of MSW was highest (0.97 kg/person/day) at site 1 followed by 0.288 kg/person/day at site 2 and 0.201 kg/person/day at site 3, with an average per capita MSW generation rate of 0.484 kg/person/day. Manual segregation of the collected wastes showed that it comprised some recyclable, combustible, compostable and inert materials. Among the different waste categories, 56% of waste was recyclable materials, 29% was compostable wastes, 9% was combustible wastes and 6% was inert materials. The present study infers that MSW management in Yusmarg was inappropriate, and infrastructure, skilled manpower and a proper scientific disposal mechanism is lacking in the area. In order to conserve the forest wealth of the area there is a great need to focus on the solid waste problem of the tourist resort.
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Affiliation(s)
- Rouf Ahmad Bhat
- Department of Environmental Science, University of Kashmir, Srinagar, India
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Rasool R, Ganai BA, Akbar S, Kamili AN. Free radical scavenging potential of in vitro raised and greenhouse acclimatized plants of Artemisia amygdalina. Chin J Nat Med 2014; 11:377-84. [PMID: 23845546 DOI: 10.1016/s1875-5364(13)60055-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2012] [Indexed: 11/26/2022]
Abstract
AIM Artemisia amygdalina Decne. (Asteraceae) is a critically endangered and endemic herb of Kashmir Himalayan sub-alpine region and Pakistan. Scientific research throughout the world has evidence to support the tremendous medicinal utility of the genus Artemisia. The natural resources of medicinal plants are being reduced day by day. This study provides the alternative way for medicinal resource utilization and conservation of A. amygdalina. METHODS In vitro-raised plants and greenhouse acclimatized plants were obtained by culturing wild explants on Murashige and Skoog's medium. Plant extracts were obtained and subjected to different antioxidant assays: DPPH assay, riboflavin photo-oxidation assay, deoxy ribose assay, ferric thiocyanate assay, thiobarbituric acid assay, post mitochondrial supernatant assay and DNA damage on agarose gel. RESULTS In vitro grown plants, as well as those acclimatized in the greenhouse reveals antioxidant activity against hydroxyl, superoxide, and lipid peroxyl radicals. CONCLUSION This preliminary study revealed the free radical scavenging potential of tissue culture-raised plant extracts of A. amydalina.
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Affiliation(s)
- R Rasool
- Department of Biochemistry, University of Kashmir, Hazratbal, Srinagar 190006, Jammu and Kashmir, India.
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Nisa H, Kamili AN, Bandh SA, Shajr-ul-Amin, Lone BA, Parray JA. Phytochemical screening, antimicrobial and antioxidant efficacy of different extracts of Rumex dentatus L. – A locally used medicinal herb of Kashmir Himalaya. Asian Pacific Journal of Tropical Disease 2013. [DOI: 10.1016/s2222-1808(13)60097-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Humeera N, Kamili AN, Bandh SA, Amin SU, Lone BA, Gousia N. Antimicrobial and antioxidant activities of alcoholic extracts of Rumex dentatus L. Microb Pathog 2013; 57:17-20. [PMID: 23415966 DOI: 10.1016/j.micpath.2013.02.001] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2012] [Accepted: 02/02/2013] [Indexed: 11/28/2022]
Abstract
In-vitro antimicrobial and antioxidant activities of various concentrations ranging from 150 to 500 μg/ml of alcoholic (methanol and ethanol) extracts of Rumex dentatus were analyzed on different clinical bacterial strains (Shigella flexneri, Klebsiella pneumoniae, Escherichia coli, Pseudomonas aeruginosa, Salmonella typhimurium, Staphylococcus aureus) and fungal strains (Aspergillus versicolor, Aspergillus flavus, Acremonium spp., Penicillium dimorphosporum, Candida albicans, Candida kruesie, Candida parapsilosis) using agar disk diffusion method and broth dilution method (MIC and MBC determination) for antimicrobial activity and DPPH (1,1-diphenyl-2-picrylhydrazyl) assay, Riboflavin photo-oxidation assay, deoxyribose assay, lipid peroxidation assay for antioxidant activity. The extracts showed maximum inhibitory effect against K. pneumonia and P. aeruginosa with no activity against S. typhimurium from among the bacterial strains while as in case of the fungal strains the maximum effect was observed against C. albicans by both the extracts. MIC and MBC values determined for active fractions of the extracts against some bacterial strains (S. flexneri, K. pneumonia and E. coli) revealed that the test organisms were inhibited by all the extracts with methanol showing lower values of both MIC and MBC indicating it as a better antimicrobial agent. The antioxidant activity showed that the extracts exhibited scavenging effect in concentration-dependent manner on superoxide anion radicals and hydroxyl radicals leading to the conclusion that the plant has got a broad spectrum antimicrobial and antioxidant activity and could be a potential alternative for treating various diseases.
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Affiliation(s)
- Nisa Humeera
- Centre of Research for Development, University of Kashmir, Srinagar 190 006, India.
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Wani D, Pandit AK, Kamili AN. Microbial assessment and effect of seasonal change on the removal efficiency of FAB based sewage treatment plant. ACTA ACUST UNITED AC 2013. [DOI: 10.7243/2050-1323-2-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Hamid R, Parray JA, Kamili AN, Mahmooduzzafar. Chromium stress in Brassica juncea L. cv. 'Pusa Jai Kissan' under hydroponic culture. ACTA ACUST UNITED AC 2012. [DOI: 10.5897/ajb11.4042] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
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Parray JA, Kamili AN, Hamid R, Husaini AM. In vitro cormlet production of saffron (Crocus sativus L. Kashmirianus) and their flowering response under greenhouse. GM Crops Food 2012; 3:289-95. [PMID: 22892688 DOI: 10.4161/gmcr.21365] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
A complete protocol for the saffron cormlet production under in vitro conditions and subsequent flowering under greenhouse conditions is described. Highest number of cormlets (70.0 ± 0.30) per corm slice (explant) could be regenerated on Murashige and Skoog (MS) half strength medium supplemented with thidiazuron (TDZ) (20 µM), Indole acetic acid (IAA) (10 µM), and sucrose (40 g/l). Maximum germination (90%) of these cormlets could be achieved on MS medium containing 6-benzyl amino purine (BAP) (20 µM) and α-naphthalene acetic acid (NAA) (15 µM). In order to increase the size of the in vitro raised cormlets, these were cultured on MS medium containing TDZ (15 µM) and IAA in the range of 1.5-30 µM. Maximum increase in cormlet size could be attained on TDZ (15 µM) + IAA (12.5 µM) + sucrose (30 g/l), and the average size of cormlets was 2.5g. In another experiment, apical vegetative buds of actively growing corms were cultured for cormlet development, and corms of size 2.5g could be developed on MS medium with NAA (15 µM), BAP (20 µM), and sucrose (30 g/l). The in vitro developed cormlets were dried under shade at 25 ± 2°C for 7 d. These were then planted in small cups containing clay loam soil and kept in green house at 20 ± 2°C. In vitro developed cormlets with mean weight 2.5 g showed maximum flowering (25%) as well as vegetative growth (55%), while only 19% cormlets of 2.0 g flowered. To our knowledge this is the first report on successful flowering from in vitro raised cormlets under greenhouse.
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Affiliation(s)
- Javid A Parray
- Department of Environmental Science, Centre of Research for Development, University of Kashmir, Srinagar, India
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Abstract
This study was conducted to analyse the free radical scavenging potential of callus obtained from nodal segments and leaf explants of Artemisia amygdalina Decne. The explants were inoculated on MS medium augmented with various concentrations of BAP, Kn, NAA and 2,4-D for callus induction. In this study, 12.42 g of callus developed from the leaf explant on MS (NAA 10 + BAP 7.5 µM) and 8.81 g of callus developed from nodal explant on NAA 2 µM+BAP 2 µM. Callus raised from both explants on all treatments seemed non-regenerative but BAP 2 µM produced 7.33 shoots and BAP 15 µM produced callus and 5 shoots per nodal segment. Callus was analysed for antioxidant activity via DPPH, riboflavin photoxidation and DNA damage assays. Methanol and aqueous extracts show more scavenging in DPPH, deoxyribose assay and in contrast, petroleum ether and ethyl acetate extracts show higher activity in riboflavin photoxidation assay. Tocopherol, ascorbic acid and BHT were used as controls.
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Affiliation(s)
- Rafia Rasool
- Department of Biochemistry, University of Kashmir, Srinagar 190 006, Jammu and Kashmir, India
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Rasool R, Ganai BA, Akbar S, Kamili AN, Masood A. Phytochemical screening of Prunella vulgaris l. - an important medicinal plant of Kashmir. Pak J Pharm Sci 2010; 23:399-402. [PMID: 20884453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Kashmiri medicinal plant (Prunella vulgaris) was analyzed for its chemical composition and amount of bioactive constituents. The results showed that the herb contains on an average alkaloid (1120 mg %), saponins (350 mg %), phenolics (55.785 mg %) and tannins (52.25 mg %). The medicinal plant contained carbohydrates (375 mg %), proteins (441.6 mg %) and lipids (2403.8 mg %). Role of these bioactive principles are discussed according to their folkloric use in Kashmir valley. Besides the herb is of great importance as far as its other clinical application are concerned. This quantitative estimation can be used for comparative evaluation of bioactive constituents with other populations of Prunella vulgaris present in different parts of the world and can be used for selection of superior quality of this herb to use in pharmaceutical industries.
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Affiliation(s)
- Rafia Rasool
- Department of Biochemistry, University of Kashmir, Srinagar-190006, J&K, India.
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