1
|
Prakash C, Indira M, Deepika B, Naveen M. Anesthetic management in a patient with acute aortic dissection and severe left ventricular systolic dysfunction. Indian J Thorac Cardiovasc Surg 2024; 40:396-397. [PMID: 38681707 PMCID: PMC11045689 DOI: 10.1007/s12055-023-01677-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Revised: 12/25/2023] [Accepted: 12/27/2023] [Indexed: 05/01/2024] Open
Affiliation(s)
- Chandra Prakash
- Department of Cardiac Anaesthesia, Pt BD Sharma PGIMS Rohtak, Room No 2, 1st floor, Lala Shyamlal Building, Haryana, 124001 India
| | - Malik Indira
- Department of Cardiac Anaesthesia, Pt BD Sharma PGIMS Rohtak, Room No 2, 1st floor, Lala Shyamlal Building, Haryana, 124001 India
| | - Budhwar Deepika
- Department of Cardiac Anaesthesia, Pt BD Sharma PGIMS Rohtak, Room No 2, 1st floor, Lala Shyamlal Building, Haryana, 124001 India
| | - Malhotra Naveen
- Department of Cardiac Anaesthesia, Pt BD Sharma PGIMS Rohtak, Room No 2, 1st floor, Lala Shyamlal Building, Haryana, 124001 India
| |
Collapse
|
2
|
Govindaraj R, Govindaraj S, Prakash C, Govindaraj S. MANEC TUMOR OF RECTUM. A RARE CASE SERIES OF 3 PATIENTS AND A LITERATURE REVIEW. Exp Oncol 2024; 45:523-530. [PMID: 38328837 DOI: 10.15407/exp-oncology.2023.04.523] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2024] [Indexed: 02/09/2024]
Abstract
The term Mixed Adeno-Neuro-Endocrine Carcinoma (MANEC) was introduced in 2010 by the WHO Classification of Tumors of the Digestive System. It refers to a neoplasm with dual epithelial and neuroendocrine differentiation, each component representing at least 30% of the tumor. It is an uncommon tumor accounting for < 3% of all colon and rectum malignancies. We report three cases of this extremely rare MANEC of the rectum. All three cases presented with hematochezia, variable constipation, and abdominal pain. They were diagnosed and staged appropriately with colonoscopy, biopsy with immunohistochemistry, and imaging. They underwent an anterior resection with circular stapled anastomoses. Because of the low incidence of this histotype, we reviewed the clinical presentation, diagnostic characteristics, and treatment of MANEC of the colon and rectum.
Collapse
Affiliation(s)
- R Govindaraj
- MBBS, RajaRajeswari Medical College and Hospital (RRMCH), Bangalore, Karnataka, India
| | - Sh Govindaraj
- St. John's Medical College & Hospital (SJMCH), Bangalore, Karnataka, India
| | - C Prakash
- St. John's Medical College & Hospital (SJMCH), Bangalore, Karnataka, India
| | - S Govindaraj
- St. John's Medical College & Hospital (SJMCH), Bangalore, Karnataka, India
| |
Collapse
|
3
|
Sarangi RK, Jishad M, Sharma R, Das A, Mali K, Ramalingam L, Kizhakudan SJ, Kumar AS, Samal RN, Prakash C. Multiple ocean parameter-based potential fishing zone (PFZ) location generation and validation in the Western Bay of Bengal. Environ Monit Assess 2023; 196:98. [PMID: 38153544 DOI: 10.1007/s10661-023-12259-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Accepted: 12/14/2023] [Indexed: 12/29/2023]
Abstract
A new conceptual framework based on satellite data, including chlorophyll (CHL), sea surface temperature (SST) fronts, relative winds, current vectors, Ekman transport, and eddies, has been developed to identify potential fishing zones (PFZ) in the Bay of Bengal (BoB). The framework aims to provide persistent forecasts, even under cloudy conditions, based on feature propagation. The validation of the PFZ was carried out using fish catch data collected by the Fishery Survey of India (FSI) between 2016 and 2018. Hooking rates (HR) from longlines and catch per unit effort (CPUE) from trawl nets were used to analyse the data points in hook rate categories (1.0-3.0 and > 3.0) and CPUE categories (50-100 kg and > 100 kg) and interpret them with the PFZ maps. The analysis showed that the high fish catch locations were consistent with persisting features in the BoB, such as high chlorophyll patches, SST fronts, and cyclonic eddies. The high fish catch locations based on hook rate and high CPUE were found to be collocated with the high chlorophyll persisting features and thermal gradients in the BoB. The regression analysis shows that availability of the food (CHL) had the strongest correlation with fish catch, followed by the comfort condition (fronts and eddies).
Collapse
Affiliation(s)
- R K Sarangi
- Space Applications Centre, Ahmedabad, 380015, India
| | - M Jishad
- Space Applications Centre, Ahmedabad, 380015, India.
| | | | - Ansuman Das
- Fishery Survey of India, Mumbai, 400005, India
| | - Kiran Mali
- Fishery Survey of India, Mumbai, 400005, India
| | | | - Shoba Joe Kizhakudan
- ICAR-Central Marine Fisheries Research Institute, Madras Research Centre, Chennai, 600028, India
| | - A Saravana Kumar
- CAS In Marine Biology, Annamalai University, Parangipettai, Tamil Nadu, 608502, India
| | - R N Samal
- Chilika Development Authority, Bhubaneswar, 751020, India
| | | |
Collapse
|
4
|
Pradhan AK, Madagala K, Naga Sravya K, Prakash C. Design and analysis of a photonic crystal nanocavity based bio-sensor for blood component detection. Appl Opt 2023; 62:9462-9469. [PMID: 38108770 DOI: 10.1364/ao.503892] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 11/07/2023] [Indexed: 12/19/2023]
Abstract
A design of a photonic crystal nanocavity based bio-sensor having a footprint of 12×8µm 2 is proposed to detect different blood components. A finite difference time domain (FDTD) numerical technique has been used to characterize the sensor by evaluating its frequency response. The shift in resonant wavelength of the proposed cavity is utilized to detect blood refractive index fluctuation due to the presence of various components. The obtained numerical findings show that the maximum sensitivity for a shift in resonant wavelength is reported as 760 nm/RIU for various blood components. Moreover, the fabrication of PhC is always prone to the fabrication induced disorders. Hence, the impact of fabrication imperfections on the sensor's performance also has been included in the analysis.
Collapse
|
5
|
Kumar Yadav A, Prakash C, Pandey A, Dixit A. Impact of Top Electrodes (Cu, Ag, and Al) on Resistive Switching behaviour of Cu-rich Cu 2 ZnSnS 4 (CZTS) Ideal Kesterite. Chemphyschem 2023; 24:e202300142. [PMID: 37646108 DOI: 10.1002/cphc.202300142] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 08/25/2023] [Accepted: 08/25/2023] [Indexed: 09/01/2023]
Abstract
Cu2 ZnSnS4 (CZTS) active material-based resistive random-access memory (RRAM) devices are investigated to understand the impact of three different Cu, Ag, and Al top electrodes. The dual resistance switching (RS) behaviour of spin coated CZTS on ITO/Glass is investigated up to 102 cycles. The stability of all the devices (Cu/CZTS/ITO, Ag/CZTS/ITO, and Al/CZTS/ITO) is investigated up to 103 sec in low- (LRS) and high- (HRS) resistance states at 0.2 V read voltage. The endurance up to 102 cycles with 30 msec switching width shows stable write and erase current. Weibull cumulative distribution plots suggest that Ag top electrode is relatively more stable for set and reset state with 33.61 and 25.02 shape factors, respectively. The charge carrier transportation is explained by double logarithmic plots, Schottky emission plots, and band diagrams, substantiating that at lower applied electric field intrinsic copper ions dominate in Cu/CZTS/ITO, whereas, at higher electric filed, top electrodes (Cu and Ag) dominate over intrinsic copper ions. Intrinsic Cu+ in CZTS plays a decisive role in resistive switching with Al electrode. Further, the impedance spectroscopy measurements suggest that Cu+ and Ag+ diffusion is the main source for the resistive switching with Cu and Ag electrodes.
Collapse
Affiliation(s)
- Ankit Kumar Yadav
- Advanced Materials and Device Laboratory, Department of Physics, Indian Institute of Technology, Jodhpur, 342037, India
| | - Chandra Prakash
- Advanced Materials and Device Laboratory, Department of Physics, Indian Institute of Technology, Jodhpur, 342037, India
| | - Akhilesh Pandey
- Solid State Physics Laboratory (SSPL), Defence Research & Development Organization (DRDO), Delhi, 110054, India
| | - Ambesh Dixit
- Advanced Materials and Device Laboratory, Department of Physics, Indian Institute of Technology, Jodhpur, 342037, India
| |
Collapse
|
6
|
Chaudhary A, Prakash C, Sharma SK, Mor S, Ravindra K, Krishnan P. Health risk assessment of aerosol particles (PM 2.5 and PM 10) during winter crop at the agricultural site of Delhi, India. Environ Monit Assess 2023; 195:1297. [PMID: 37828346 DOI: 10.1007/s10661-023-11826-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Accepted: 09/01/2023] [Indexed: 10/14/2023]
Abstract
For the last few decades, air pollution in developing country like India is increasing, and it is a matter of huge concern due to its associated human health impacts. In this region, the burgeoning population, escalating urbanization and industrialization, has been cited as the major reason for such a high air pollution. The present study was carried out for health risk assessment of aerosol particles (PM10 and PM2.5) and its associated heavy metals of an agriculture farm site at Indian Agricultural Research Institute (IARI) considered to be green urban area in Delhi, India. The concentrations of both PM10 and PM2.5 varied significantly from 136 to 177 µg/m3 and 56 to 162 µg/m3, respectively at the site. In the present case, the highest PM10 and PM2.5 levels were reported in January, followed by December. The levels of ambient PM10 and PM2.5 are influenced by wind prevailing meteorology. These levels of PM10 and PM2.5 are more than the permissible limits of WHO guidelines of 15 and 5 µg/m3, respectively, thereby leading to high aerosol loadings specifically in winters. The PM concentration of the atmosphere was found to be negatively correlated with temperature during the sampling period. The concentrations of surface ozone O3 and NOx in the present study were observed to be high in February and March, respectively. The increasing air pollution in the city of Delhi poses a great risk to the human health, as the particulate matter loaded with heavy metals can enter humans via different pathways, viz., ingestion, inhalation, and absorption through skin. The mean hazard index for metals (Zn, Pb, Cd, As, Cr, and Ni) was observed within the acceptable limit (HI < 1), thereby indicating negligible non-carcinogenic effects to residing population. The carcinogenic risk assessment was conducted for Cd, Pb, and As only, as the concentrations for other metals were found to be quite low. The carcinogenic risk values were also within the limits of USEPA standards, indicating no carcinogenic risks to the health of children and adults residing near the site. This information about the PM pollution at the agricultural site and health risk assessment will serve as a baseline data in assessment of human health impacts due to air pollution at the local scale and can be used for development of mitigation strategies for tackling air pollution.
Collapse
Affiliation(s)
- Anita Chaudhary
- Division of Environment Sciences, ICAR-IARI, New Delhi, 110 012, India.
| | - Chandra Prakash
- Division of Environment Sciences, ICAR-IARI, New Delhi, 110 012, India
| | - Sudhir Kumar Sharma
- CSIR-National Physical Laboratory, Dr. K.S. Krishnan Road, New Delhi, 110012, India
| | - Suman Mor
- Department of Environment Studies, Panjab University, Chandigarh, 160014, India
| | - Khaiwal Ravindra
- Department of Community Medicine and School of Public Health, PGIMER, Chandigarh, 160015, India
| | - Prameela Krishnan
- Division of Agricultural Physics, ICAR-IARI, New Delhi, 110 012, India
| |
Collapse
|
7
|
Prakash C, Mangus H, Yan Y, Yang H, Iyer V. An innovative phase I study in healthy subjects to determine the mass balance, elimination, metabolism, and absolute bioavailability of mitapivat. Clin Transl Sci 2023; 16:2021-2032. [PMID: 37596712 PMCID: PMC10582659 DOI: 10.1111/cts.13609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Revised: 07/08/2023] [Accepted: 07/28/2023] [Indexed: 08/20/2023] Open
Abstract
Mitapivat, a first-in-class, oral, small-molecule, allosteric activator of the red blood cell-specific form of pyruvate kinase (PKR), was approved for the treatment of hemolytic anemia in adults with pyruvate kinase (PK) deficiency. In this phase I mass balance study in healthy males, we administered a single ~120 mg oral dose of [14 C]mitapivat and a concomitant intravenous ~0.1 mg microdose of [13 C6 ]mitapivat. We determined (1) the routes of total radioactivity excretion, including the mass balance of total radioactivity in urine and feces; (2) the pharmacokinetics of mitapivat and [13 C6 ]mitapivat in plasma and total radioactivity in whole blood and plasma; (3) the absolute oral bioavailability of mitapivat; and (4) the metabolite profiles in plasma and excreta. Mean recovery of the radioactive dose was 89.1% (49.6% in urine and 39.6% in feces). [14 C]Mitapivat was rapidly absorbed and extensively metabolized as <4% of the total radioactive dose was excreted unaltered in urine and feces. Mean absolute oral bioavailability was 72.7%. A total of 17 metabolites were identified. Mitapivat accounted for 57% and 34% of plasma radioactivity in AUC0-24 and AUC0-72 pooled samples, respectively. The remaining radioactivity was attributable to several metabolites, each representing <10% of the total radioactivity in pooled samples; none were disproportionate metabolites as defined by the US Food and Drug Administration and International Conference on Harmonisation M3 guidelines. Metabolite structures suggest that the primary metabolic pathways for [14 C]mitapivat in humans include N-dealkylation of the cyclopropylmethyl moiety, oxygenation of the quinoline-8-sulfonamide, oxidation/unsaturation, scission of the piperazine moiety, and amide hydrolysis.
Collapse
Affiliation(s)
| | | | - Yan Yan
- Agios PharmaceuticalsCambridgeMassachusettsUSA
| | - Hua Yang
- Agios PharmaceuticalsCambridgeMassachusettsUSA
| | - Varsha Iyer
- Agios PharmaceuticalsCambridgeMassachusettsUSA
| |
Collapse
|
8
|
Harshvardhan R, Prakash C, Meena RL, Kumbhat P. Hearing Outcome After Incudo-stapedial Joint Reconstruction Using Conchal Cartilage Interposition Graft. Indian J Otolaryngol Head Neck Surg 2023; 75:1694-1698. [PMID: 37636698 PMCID: PMC10447325 DOI: 10.1007/s12070-023-03649-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2022] [Accepted: 02/26/2023] [Indexed: 08/29/2023] Open
Abstract
Ossicular chain defects secondary to Chronic otitis media most frequently involves the incudo-stapedial joint. This study observes the effect of incudo-stapedial joint reconstruction using conchal cartilage interposition graft on hearing of the patient. Fifty-three patients with chronic otitis media of inactive mucosal type with incudostapedial necrosis of less than half of long process of incus were posted for tympanoplasty with incudostapedial joint reconstruction using autologus conchal cartilage. Their hearing outcome was analysed by comparing the pre-operative and 12 weeks post-operative Pure Tone Audiogram. A statistically significant improvement is seen in air conduction by 14.66 dB after incudo-stapedial joint reconstruction using conchal cartilage (p value 0.0001), whereas improvement seen in bone conduction was statistically insignificant. 52 (98.1%) patients had ≤ 40 dB post-op AC and 1 (1.9%) had > 40 dB.. Conchal cartilage is an easy-to-harvest, biocompatible and cost effective graft material. It gives hearing results comparable to other materials.
Collapse
Affiliation(s)
- Rekha Harshvardhan
- Department of Otorhinolaryngology and Head and Neck Surgery, S.M.S. Medical College, Jaipur, Rajasthan India
| | - Chandra Prakash
- Department of Otorhinolaryngology and Head and Neck Surgery, S.M.S. Medical College, Jaipur, Rajasthan India
| | - Ram Lakhan Meena
- Department of Otorhinolaryngology and Head and Neck Surgery, S.M.S. Medical College, Jaipur, Rajasthan India
| | - Payal Kumbhat
- Department of Otorhinolaryngology and Head and Neck Surgery, S.M.S. Medical College, Jaipur, Rajasthan India
| |
Collapse
|
9
|
Prakash C, Yadav AK, Dixit A. Low power highly flexible BiFeO 3-based resistive random access memory (RRAM) with the coexistence of negative differential resistance (NDR). Phys Chem Chem Phys 2023. [PMID: 37455647 DOI: 10.1039/d3cp02235h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/18/2023]
Abstract
We demonstrated the resistive random access memory characteristics for Cu (top contact)/BFO/PMMA (active layer)/ITO (bottom electrode)/PET sheet as a flexible substrate device configuration. The device showed non-volatile bipolar resistive switching characteristics with good repeatability and the coexistence of NDR for 100 cycles or more with 0.28/3.43 mW power consumption for 1st/100th cycles. The device retains its read state for 104 s or more and switches from LRS to HRS or vice versa for 103 cycles with a pulse width of 100 ms for a write-read-erase-read pulse without affecting the memory characteristics. The Weibull distribution suggests that a set state is more stable than the reset state with shape factor β = 25.20. The device follows Ohmic behavior for the lower applied external field and Child square and Schottky emission for the higher external fields. The Joule heating, Sorets, and Fick's forces are responsible for the formation and rupturing of ionic filament. The coexistence of resistive switching and flexible strength of the device sustains the bending curvature of infinity, 0.2 cm, 1 cm, 1.7 cm, and 2.2 cm. The memory characteristics are retained under tensile conditions for 100 cycles or more. More interestingly, the power consumption for sustaining the NDR region with bending (19 μW) is much lower than without bending (0.19 mW). Thus, this study provides the possibility of integrating BFO with flexible substrates suitable for hybrid organic/inorganic memory structures.
Collapse
Affiliation(s)
- Chandra Prakash
- Advance Materials and Device (A-MAD) Laboratory, Department of Physics, IIT Jodhpur, Rajasthan, 342030, India.
| | - Ankit K Yadav
- Advance Materials and Device (A-MAD) Laboratory, Department of Physics, IIT Jodhpur, Rajasthan, 342030, India.
| | - Ambesh Dixit
- Advance Materials and Device (A-MAD) Laboratory, Department of Physics, IIT Jodhpur, Rajasthan, 342030, India.
| |
Collapse
|
10
|
Pawar NA, Prakash C, Kohli MPS, Jamwal A, Dalvi RS, Devi BN, Singh SK, Gupta S, Lende SR, Sontakke SD, Gupta S, Jadhao SB. Fructooligosaccharide and Bacillus subtilis synbiotic combination promoted disease resistance, but not growth performance, is additive in fish. Sci Rep 2023; 13:11345. [PMID: 37443328 PMCID: PMC10345097 DOI: 10.1038/s41598-023-38267-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Accepted: 07/06/2023] [Indexed: 07/15/2023] Open
Abstract
Species diversification from major to minor carps for their sturdiness and initial higher growth, and also a quest for antibiotic-free aqua farming in the subcontinent, mandates search for and evaluation of alternatives. An experiment was performed to investigate the potential of fructooligosaccharide (FOS) and Bacillus subtilis (BS) (alone or as synbiotics) in promoting growth and immunity against infections in Labeo fimbriatus fingerlings. Six iso-nitrogenous and iso-lipidic diets containing combinations of two levels of FOS (0% and 0.5%) and three levels of BS (0, 104, 106 CFU/g feed) were fed to fish for 60 days. At the end of the feeding trial, twenty-four fish from each group were injected intra-peritoneally with pathogenic strain of Aeromonas hydrophila O:18 to test the immunoprotective efficacy of the supplements against bacterial infection. BS, but not FOS, significantly improved (P < 0.05) growth and feed utilisation attributes like percentage weight gain (PWG), specific growth rate (SGR) and feed conversion ratio (FCR). There were interactive effects of FOS and BS on PWG, SGR and FCR; however, the effects were not additive in nature. These beneficial effects of BS, alone or in combination with FOS, were corroborated by increased protease activity, microvilli density and diameter and number of goblet cells. Overall beneficial effects of FOS and BS included improved erythrocyte (RBC), hemoglobin (Hb), total protein and globulin levels. Total leucocyte (WBC) count and immunological parameters like respiratory burst activity of leucocytes (NBT reduction), lysozyme activity, albumin: globulin ratio and post-challenge survival were significantly improved by both FOS and BS, and their dietary combination yielded the highest improvement in these parameters. Synergistic effects of FOS and BS as dietary supplements indicate that a combination of 106 CFU/g BS and 0.5% FOS is optimal to improve growth, feed utilisation, immune functions, and disease resistance in L. fimbriatus fingerlings.
Collapse
Affiliation(s)
- Nilesh Anil Pawar
- ICAR-Central Institute of Fisheries Education, Mumbai, 400061, India
- ICAR-Central Marine Fisheries Research Institute, Mumbai Centre, Mumbai, 400061, India
| | - Chandra Prakash
- ICAR-Central Institute of Fisheries Education, Mumbai, 400061, India
| | | | - Ankur Jamwal
- Centre for Climate Change & Sustainability, Azim Premji University, Bengaluru, 562125, India
| | | | - B Nightingale Devi
- Colleges of Fisheries, Chhattisgarh Kamdhenu University, Raipur, 491995, India
| | - Soibam Khogen Singh
- College of Fisheries, Central Agricultural University, Lembucherra, 799210, India
| | - Shobha Gupta
- Annasaheb Vartak College (University of Mumbai), Mumbai, 401202, India
| | - Smit Ramesh Lende
- Center of Excellence in Aquaculture, Kamdhenu University, Ukai, 394680, India
| | - Sadanand D Sontakke
- CSIR-National Environmental Engineering Research Institute, Nagpur, 440 020, India
| | - Subodh Gupta
- ICAR-Central Institute of Fisheries Education, Mumbai, 400061, India
| | | |
Collapse
|
11
|
Prakash C, Kumar V, Chaturvedi V. Efficient removal of endocrine disrupting compounds 17 α-ethynyl estradiol and 17 β-estradiol by Enterobacter sp. strain BHUBP7 and elucidation of the degradation pathway by HRAMS analysis. World J Microbiol Biotechnol 2023; 39:218. [PMID: 37269502 DOI: 10.1007/s11274-023-03662-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 05/23/2023] [Indexed: 06/05/2023]
Abstract
Owing to the increased population and their overuse, estrogens are being detected in the environment at alarming levels. They act as endocrine disrupting compounds (EDC's) posing adverse effects on animals and humans. In this study, a strain belonging to Enterobacter sp. strain BHUBP7 was recovered from a Sewage Treatment Plant (STP) situated in Varanasi city, U.P., India, and was capable of metabolizing both 17 α-Ethynylestradiol (EE2) and 17 β-Estradiol (E2) separately as a sole carbon source. The strain BHUBP7 exhibited high rates of E2 degradation as compared to EE2 degradation. The degradation of E2 (10 mg/L) was 94.3% after four days of incubation, whereas the degradation of EE2 (10 mg/L) under similar conditions was 98% after seven days of incubation. The kinetics of EE2 and E2 degradation fitted well with the first-order reaction rate. FTIR analysis revealed the involvement of functional groups like C = O, C-C, C-OH during the degradation process. The metabolites generated during degradation of EE2 and E2 were identified using HRAMS and a plausible pathway was elucidated. It was observed that metabolism of both E2 and EE2 proceeded with the formation of estrone, which was then hydroxylated to 4-hydroxy estrone, followed by ring opening at the C4-C5 position, and was further metabolized by the 4,5 seco pathway leading to the formation of 3-(7a-methyl-1,5-dioxooctahydro-1H-inden-4-yl) propanoic acid (HIP). It is the first report on the complete pathway of EE2 and E2 degradation in Enterobacter sp. strain BHUBP7. Moreover, the formation of Reactive Oxygen Species (ROS) during the degradation of EE2 and E2 was observed. It was concluded that both hormones elicited the generation of oxidative stress in the bacterium during the degradation process.
Collapse
Affiliation(s)
- Chandra Prakash
- School of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, 221 005, India
| | - Vivek Kumar
- School of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, 221 005, India
| | - Venkatesh Chaturvedi
- School of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, 221 005, India.
| |
Collapse
|
12
|
Xu L, Peng CC, Dawson K, Stecher S, Woodworth J, Prakash C. Metabolism, Pharmacokinetics and Excretion of [ 14C]Dimethyl Fumarate in Healthy Volunteers: An Example of Xenobiotic Biotransformation Following Endogenous Metabolic Pathways. Xenobiotica 2023:1-28. [PMID: 37216617 DOI: 10.1080/00498254.2023.2217506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2023] [Revised: 05/20/2023] [Accepted: 05/21/2023] [Indexed: 05/24/2023]
Abstract
Delayed-release dimethyl fumarate (DMF), Tecfidera®, is approved globally for treating relapsing-remitting multiple sclerosis. The disposition of DMF was determined in humans after administration of a single oral dose of [14C]DMF, and the total recovery was estimated to be between 58.4% to 75.0%, primarily through expired air.The absorption of [14C]DMF-derived radioactivity was rapid, with Tmax at 1h postdose. Glucose was the predominant circulating metabolite, accounting for ∼60% of the total extractable radioactivity. Cysteine and N-acetylcysteine conjugates of mono- or di-methyl succinate were found to be the major urinary metabolites.In vitro studies showed that [14C]DMF was mainly metabolized to MMF, and fumarase exclusively converted fumaric acid to malic acid and did not catalyze the conversion of fumaric acid esters to malic acid. DMF was observed to bind with human serum albumin through Michael addition to the Cys-34 residue when exposed to human plasma.These findings indicate that DMF undergoes metabolism via hydrolysis, GSH conjugation, and the TCA cycle, leading to the formation of citric acid, CO2, and water. These ubiquitous and well-conserved metabolism pathways minimize the risk of drug-drug interactions and reduce variability related to pharmacogenetics and ethnicity.
Collapse
Affiliation(s)
- Lin Xu
- Clinical Pharmacology and Pharmacometrics, Biogen, Cambridge, MA
| | - Chi-Chi Peng
- Clinical Pharmacology and Pharmacometrics, Biogen, Cambridge, MA
| | - Kate Dawson
- Clinical Pharmacology and Pharmacometrics, Biogen, Cambridge, MA
| | - Scott Stecher
- Clinical Pharmacology and Pharmacometrics, Biogen, Cambridge, MA
| | - James Woodworth
- Clinical Pharmacology and Pharmacometrics, Biogen, Cambridge, MA
| | - Chandra Prakash
- Clinical Pharmacology and Pharmacometrics, Biogen, Cambridge, MA
| |
Collapse
|
13
|
Singh BK, Venkadesan S, Ramkumar MK, Shanmugavadivel PS, Dutta B, Prakash C, Pal M, Solanke AU, Rai A, Singh NK, Mohapatra T, Sevanthi AM. Meta-Analysis of Microarray Data and Their Utility in Dissecting the Mapped QTLs for Heat Acclimation in Rice. Plants (Basel) 2023; 12:1697. [PMID: 37111920 PMCID: PMC10142300 DOI: 10.3390/plants12081697] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Revised: 02/07/2023] [Accepted: 02/10/2023] [Indexed: 06/19/2023]
Abstract
In the current global warming scenario, it is imperative to develop crops with improved heat tolerance or acclimation, for which knowledge of major heat stress-tolerant genes or genomic regions is a prerequisite. Though several quantitative trait loci (QTLs) for heat tolerance have been mapped in rice, candidate genes from these QTLs have not been reported yet. The meta-analysis of microarray datasets for heat stress in rice can give us a better genomic resource for the dissection of QTLs and the identification of major candidate genes for heat stress tolerance. In the present study, a database, RiceMetaSys-H, comprising 4227 heat stress-responsive genes (HRGs), was created using seven publicly available microarray datasets. This included in-house-generated microarray datasets of Nagina 22 (N22) and IR64 subjected to 8 days of heat stress. The database has provisions for searching the HRGs through genotypes, growth stages, tissues, and physical intervals in the genome, as well as Locus IDs, which provide complete information on the HRGs with their annotations and fold changes, along with the experimental material used for the analysis. The up-regulation of genes involved in hormone biosynthesis and signalling, sugar metabolism, carbon fixation, and the ROS pathway were found to be the key mechanisms of enhanced heat tolerance. Integrating variant and expression analysis, the database was used for the dissection of the major effect of QTLs on chromosomes 4, 5, and 9 from the IR64/N22 mapping population. Out of the 18, 54, and 62 genes in these three QTLs, 5, 15, and 12 genes harboured non-synonymous substitutions. Fifty-seven interacting genes of the selected QTLs were identified by a network analysis of the HRGs in the QTL regions. Variant analysis revealed that the proportion of unique amino acid substitutions (between N22/IR64) in the QTL-specific genes was much higher than the common substitutions, i.e., 2.58:0.88 (2.93-fold), compared to the network genes at a 0.88:0.67 (1.313-fold) ratio. An expression analysis of these 89 genes showed 43 DEGs between IR64/N22. By integrating the expression profiles, allelic variations, and the database, four robust candidates (LOC_Os05g43870, LOC_Os09g27830, LOC_Os09g27650, andLOC_Os09g28000) for enhanced heat stress tolerance were identified. The database thus developed in rice can be used in breeding to combat high-temperature stress.
Collapse
Affiliation(s)
- Bablee Kumari Singh
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110012, India
- PG School, ICAR-Indian Agricultural Research Institute, Pusa Campus, New Delhi 110012, India
| | | | - M. K. Ramkumar
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110012, India
| | - P. S. Shanmugavadivel
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110012, India
- Division of Plant Biotechnology, ICAR-Indian Institute of Pulses Research, Kanpur 208024, India
| | - Bipratip Dutta
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110012, India
| | - Chandra Prakash
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110012, India
| | - Madan Pal
- Division of Plant Physiology, ICAR-Indian Agricultural Research Institute, New Delhi 110012, India
| | - Amolkumar U. Solanke
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110012, India
| | - Anil Rai
- ICAR-Indian Agricultural Statistics Research Institute, Pusa Campus, New Delhi 110012, India
| | - Nagendra Kumar Singh
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110012, India
| | - Trilochan Mohapatra
- Indian Council of Agricultural Research, Krishi Bhawan, New Delhi 110001, India
| | | |
Collapse
|
14
|
Mahalakshmi V, Pachiayappan KM, Prakash C, Rajwin AJ. Influence of plasma treatment on moisture management properties of cotton/polyester knitted fabrics. Polym Bull (Berl) 2023. [DOI: 10.1007/s00289-023-04770-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/31/2023]
|
15
|
Prakash C, Rabidas SS, Tyagi J, Sharma D. Dehydroepiandrosterone Attenuates Astroglial Activation, Neuronal Loss and Dendritic Degeneration in Iron-Induced Post-Traumatic Epilepsy. Brain Sci 2023; 13:brainsci13040563. [PMID: 37190528 DOI: 10.3390/brainsci13040563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Revised: 03/22/2023] [Accepted: 03/25/2023] [Indexed: 03/29/2023] Open
Abstract
Iron-induced experimental epilepsy in rodents reproduces features of post-traumatic epilepsy (PTE) in humans. The neural network of the brain seems to be highly affected during the course of epileptogenesis and determines the occurrence of sudden and recurrent seizures. The aim of the current study was to evaluate astroglial and neuronal response as well as dendritic arborization, and the spine density of pyramidal neurons in the cortex and hippocampus of epileptic rats. We also evaluated the effect of exogenous administration of a neuroactive steroid, dehydroepiandrosterone (DHEA), in epileptic rats. To induce epilepsy, male Wistar rats were given an intracortical injection of 100 mM solution (5 µL) of iron chloride (FeCl3). After 20 days, DHEA was administered intraperitoneally for 21 consecutive days. Results showed epileptic seizures and hippocampal Mossy Fibers (MFs) sprouting in epileptic rats, while DHEA treatment significantly reduced the MFs’ sprouting. Astroglial activation and neuronal loss were subdued in rats that received DHEA compared to epileptic rats. Dendritic arborization and spine density of pyramidal neurons was diminished in epileptic rats, while DHEA treatment partially restored their normal morphology in the cortex and hippocampus regions of the brain. Overall, these findings suggest that DHEA’s antiepileptic effects may contribute to alleviating astroglial activation and neuronal loss along with enhancing dendritic arborization and spine density in PTE.
Collapse
|
16
|
Harding A, Pramanik A, Basak A, Prakash C, Shankar S. Application of additive manufacturing in the biomedical field- A review. Annals of 3D Printed Medicine 2023. [DOI: 10.1016/j.stlm.2023.100110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/18/2023] Open
|
17
|
Roy V, Prakash C, Charan P. Under “my way or the highway”! The weaker partner's synergy on collaborative performance in humanitarian relief when experiencing power tactics. IJOPM 2023. [DOI: 10.1108/ijopm-12-2021-0749] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/11/2023]
Abstract
PurposeMy way or the highway: A stronger partner in humanitarian relief collaboration often seeks control over its weaker partners by leveraging diverse power tactics that may be non-coercive or coercive in nature. In this backdrop, this research accentuates the perspective of weaker partners to understand how a weaker partner drives collaborative synergy under power tactics. Weaker partner in the collaborative dyad resembles the humanitarian organization (HO) who is less capable in terms of access to resources. This partner is further dependent on the stronger HO's directives to participate in the relief work.Design/methodology/approachBased on social exchange theory (SET), a collaborative dyad in humanitarian relief work is visualized from the perspectives of power and power disparity. In terms of power, mediated power tactics such as legal, coercive and reward powers are considered. Disparity recognizes the presence of a stronger and a weaker partner. Set also magnifies the insight on conflict and trust that can respectively hamper and improve the synergy between partners. In total, 295 executives representing self-reported weaker HOs are surveyed.FindingsLegal power, as experienced by the weaker partner, bears a positive impact over collaborative performance to improve collaborative synergy. Coercive power shows a negative impact. Reward power again bears a positive impact. Coercion can complicate collaborative synergy by establishing conflicts. Yet, the trust of weaker partner on stronger HO positively moderates the negative impact of conflict over collaborative performance.Originality/valueThis research invokes the view of power disparity to explain synergy in inter-organizational collaboration from the perspective of weaker partners.
Collapse
|
18
|
Prakash S, Arora A, Nilaish N, Prakash C, Srivastava A. Supplier evaluation and selection in the constrained environment of advance purchasing. JGOSS 2023. [DOI: 10.1108/jgoss-12-2021-0103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Purpose
The purpose of this study is to address supplier evaluation and selection in a constrained environment of advance purchasing. The study presents the potential solutions to supplier evaluation and selection issues in the Indian automobile sector where advance purchases are carried out to fulfill the supply chain demand.
Design/methodology/approach
Based on the literature review and expert elicitation, nine major factors which are responsible for the successful implementation of supplier selection in a constrained environment of advance purchasing are identified. This paper explores supplier selection in constrained environment issues based on an integrated method based on Shannon entropy, analytic hierarchy process (AHP) techniques and failure mode effects analysis (FMEA).
Findings
Analysis of the results of the study suggests that traditional suppliers are not suitable in advance purchasing scenarios; hence, criteria developed in this paper to accommodate the requirement of advance purchasing with possible risk considerations are of high importance. This research paper is an original attempt to develop supplier selection criteria for advance purchasing with special identification of deliverability, flexibility, innovation and productivity factors through a case demonstration.
Research limitations/implications
This study uses data from secondary sources, literature reviews and expert opinions. It formalizes the important factors of successful supplier selection in the constrained environment of advance purchasing in the automotive industry context.
Practical implications
The paper shows how the engagement of suppliers through advance purchasing helps automotive companies in developing a competitive advantage. The integrated approach of Shannon entropy, AHP techniques and FMEA is an effective and useful method that can be applied to the supplier selection process.
Originality/value
The proposed FMEA-AHP method integrated with Shannon entropy used for evaluation represents a useful tool to embrace the suitable functioning tactics for efficient supplier selection. The study is unique as supplier evaluation and selection in a constrained environment of advance purchasing is not investigated much and has good industry applicability.
Collapse
|
19
|
Ambekar AA, Sivaperumal P, Kamala K, Kubal P, Prakash C. Effect of temperature changes on antioxidant enzymes and oxidative stress in gastropod Nerita oryzarum collected along India's first Tarapur Atomic Power Plant site. Environ Res 2023; 216:114334. [PMID: 36162475 DOI: 10.1016/j.envres.2022.114334] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 08/30/2022] [Accepted: 09/09/2022] [Indexed: 06/16/2023]
Abstract
Temperature can be considered as pro-oxidant factor that favor the generation of ROS on the species with lower antioxidant efficiency may leads to affect the level of tolerance. So the basic antioxidant enzyme activity (LPO, CAT, SOD, GPx and GST) of gastropod Nerita oryzarum was evaluated at six stations which located between the thermal effluent discharges points from Tarapur Atomic Power Station, India. The antioxidant enzyme activity was shown that all enzyme at discharge point (SII station) where the maximum temperature of heated effluent released. The average maximum values of enzyme activity recorded for LPO, CAT, SOD, GPx and GST were 1.88 ± 0.12, 1.52 ± 0.14, 22.57 ± 0.89, 1.98 ± 0.2 and 17.22 ± 0.63 respectively. The results were inferred the level water temperature directly proportional to the oxidative stress by ROS generation in Nerita oryzarum. Similar results were observed at laboratory experiment under the condition i.e., Treatment 1 (300C), Treatment 2 (350C), Treatment 3 (400C) and Control (250C). The present prima facie work clearly indicated the physiological response of N. oryzarum with respect to antioxidant enzyme activity against the heated effluent released, which will be useful as baseline information for future research work.
Collapse
Affiliation(s)
- Ajit A Ambekar
- Department of Zoology, Smt.Devkiba Mohansinhaji Chauhan College of Commerce and Science, Silvassa, UT of Dadra and Nagar Haveli, 396 230, India; Department of Applied Zoology, Mangalore University, Mangalagangothri, Mangalore, 574 199, India; ICAR-Central Institute of Fisheries Education, Panch Marg, Off Yari Road, Versova, Andheri (West), Mumbai, 400061, India.
| | - Pitchiah Sivaperumal
- Marine Biomedical Research Lab & Environmental Toxicology Unit, Department of Research and Analytics, Saveetha Dental College and Hospitals, Saveetha Institute of Medical & Technical Sciences, Saveetha University, Chennai, 600077, Tamil Nadu, India.
| | - Kannan Kamala
- Department of Physiology, Saveetha Dental College and Hospitals, Saveetha Institute of Medical & Technical Sciences, Saveetha University, Chennai, 600077, Tamil Nadu, India
| | - Priti Kubal
- Department of Applied Zoology, Mangalore University, Mangalagangothri, Mangalore, 574 199, India; ICAR-Central Institute of Fisheries Education, Panch Marg, Off Yari Road, Versova, Andheri (West), Mumbai, 400061, India
| | - Chandra Prakash
- ICAR-Central Institute of Fisheries Education, Panch Marg, Off Yari Road, Versova, Andheri (West), Mumbai, 400061, India
| |
Collapse
|
20
|
Singh R, Prakash C. Microwave-assisted Synthesis of Fluorinated Heterocycles. CGC 2022. [DOI: 10.2174/2213346110666221223140653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Abstract:
The diverse biological applications of fluorinated heterocycles make them crucial chemical compounds. Several synthetic processes have been developed for their synthesis. Microwave-assisted synthesis has emerged as an important technique for generating fluorinated heterocycles in an eco-friendly and energy-efficient manner. It provides several benefits like less reaction time, high reaction yield, homogeneous heat distribution leading to lower side reaction, and better control of reaction temperature. Recently there has been significant progress in microwave use for heterocycle synthesis. This article discusses the applications of microwave irradiation in the synthesis of oxygen- and nitrogen-containing fluorinated heterocycles.
Collapse
Affiliation(s)
- Ram Singh
- Department of Applied Chemistry, Delhi Technological University, Delhi, India
| | - Chandra Prakash
- Department of Applied Chemistry, Delhi Technological University, Delhi, India
- Centre for Fire, Explosive and Environment Safety, DRDO, Timarpur, Delhi - 110034, India
| |
Collapse
|
21
|
Sudheshna AA, Srivastava M, Prakash C. Characterization of microfibers emission from textile washing from a domestic environment. Sci Total Environ 2022; 852:158511. [PMID: 36063944 DOI: 10.1016/j.scitotenv.2022.158511] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2022] [Revised: 08/01/2022] [Accepted: 08/31/2022] [Indexed: 06/15/2023]
Abstract
Microfibers and microplastics are widely recognized emerging pollutants, which have the potential to cause an Eco-toxicological effect. Cellulosic and synthetic fibers are being released almost equally to the environment. Synthetic fibers released were non-biodegradable resulting in a significant negative impact on the environment. In the present study, four different households using fully automated washing machines (2 top-load, 2 front-load) were studied in a domestic laundry environment under real conditions. Laundry effluents were collected and contaminants analysis was carried out. The results estimated that the average emission rate of the four households was 7,453,635 MF/7Kg (FL, H1), 7,375,500 MFs/6Kg (FL, H2), 10,692,255 MFs/7Kg (TL, H3) and 7,589,017 MFs/6.2Kg (TL, H4). Synthetic fiber's emission rate was only about 19 %, and the average length range of microfibers released was found to be in the range of ≤5 μm (48.64 %), and the least amount of emission was found in the >500 μm range (11.49 %).
Collapse
Affiliation(s)
- Aligina Anvitha Sudheshna
- Department of Textile and Apparel Designing, College of Community and Applied Sciences, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan 313 001, India
| | - Meenu Srivastava
- Department of Textile and Apparel Designing, College of Community and Applied Sciences, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan 313 001, India
| | - C Prakash
- Department of Handloom and Textile Technology, Indian Institute of Handloom Technology, Ministry of Textiles, Govt. of India, Fulia Colony, Shantipur, Nadia 741402, West Bengal, India.
| |
Collapse
|
22
|
Fadzil AFBA, Pramanik A, Basak A, Prakash C, Shankar S. Role of surface quality on biocompatibility of implants - A review. Annals of 3D Printed Medicine 2022. [DOI: 10.1016/j.stlm.2022.100082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
|
23
|
Prakash C, Dwivedi S. Trends in Political Campaigning Research: A Bibliometric Literature Analysis. J Scientometric Res 2022. [DOI: 10.5530/jscires.11.2.28] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
|
24
|
Prakash C, Chaurasiya R, Kale AJ, Dixit A. Low-Temperature Highly Robust Hydrogen Sensor Using Pristine ZnO Nanorods with Enhanced Response and Selectivity. ACS Omega 2022; 7:28206-28216. [PMID: 35990479 PMCID: PMC9386818 DOI: 10.1021/acsomega.2c02510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Accepted: 07/18/2022] [Indexed: 06/15/2023]
Abstract
We report the hydrogen-sensing response on low-cost-solution-derived ZnO nanorods (NRs) on a glass substrate, integrated with aluminum as interdigitated electrodes (IDEs). The hydrothermally grown ZnO NRs on ZnO seed-layer-glass substrates are vertically aligned and highly textured along the c-axis (002 plane) with texture coefficient ∼2.3. An optimal hydrogen-sensing response of about 21.46% is observed for 150 ppm at 150 °C, which is higher than the responses at 100 and 50 °C, which are ∼12.98 and ∼10.36%, respectively. This can be attributed to the large surface area of ∼14.51 m2/g and pore volume of ∼0.013 cm3/g, associated with NRs and related defects, especially oxygen vacancies in pristine ZnO nanorods. The selective nature is investigated with different oxidizing and reducing gases like NO2, CO, H2S, and NH3, showing relatively much lower ∼4.28, 3.42, 6.43, and 3.51% responses, respectively, at 50 °C for 50 ppm gas concentration. The impedance measurements also substantiate the same as the observed surface resistance is initially more than bulk, which reduces after introducing the hydrogen gas during sensing measurements. The humidity does not show any significant change in the hydrogen response, which is ∼20.5 ± 1.5% for a large humidity range (from 10 to 65%). More interestingly, the devices are robust against sensing response, showing no significant change after 10 months or even more.
Collapse
|
25
|
Prakash C, Tyagi J, Rabidas SS, Kumar V, Sharma D. Therapeutic Potential of Quercetin and its Derivatives in Epilepsy: Evidence from Preclinical Studies. Neuromolecular Med 2022:10.1007/s12017-022-08724-z. [PMID: 35951285 DOI: 10.1007/s12017-022-08724-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 07/18/2022] [Indexed: 10/15/2022]
Abstract
Quercetin is a polyphenolic bioactive compound highly enriched in dietary fruits, vegetables, nuts, and berries. Quercetin and its derivatives like rutin and hyperoside are known for their beneficial effects in various neurological conditions including epilepsy. The clinical studies of quercetin and its derivatives in relation to epilepsy are limited. This review provides the evidence of most recent knowledge of anticonvulsant properties of quercetin and its derivatives on preclinical studies. Additionally, the studies demonstrating antiseizure potential of various plants extracts enriched with quercetin and its derivatives has been included in this review. Herein, we have also discussed neuroprotective effect of these bioactive compound and presented underlying mechanisms responsible for anticonvulsant properties in brief. Finally, limitations of quercetin and its derivatives as antiseizure compounds as well as possible strategies to enhance efficacy have also been discussed.
Collapse
Affiliation(s)
- Chandra Prakash
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Jyoti Tyagi
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Shyam Sunder Rabidas
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Vijay Kumar
- Department of Biochemistry, Maharshi Dayanand University, Rohtak, 124001, Haryana, India
| | - Deepak Sharma
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India.
| |
Collapse
|
26
|
Suryavanshi J, Prakash C, Sharma D. Asiatic acid attenuates aluminium chloride-induced behavioral changes, neuronal loss and astrocyte activation in rats. Metab Brain Dis 2022; 37:1773-1785. [PMID: 35554794 DOI: 10.1007/s11011-022-00998-3] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Accepted: 04/29/2022] [Indexed: 12/26/2022]
Abstract
Aluminium (Al) is a potent neurotoxic metal known to cause neurodegeneration. Al exposure causes oxidative stress by accumulation of reactive oxygen species, followed by the activation of neuronal cell death in the brain. Asiatic acid (AA), the major bioactive compound of Centella asiatica (a medicinal plant), act as multifunctional drug as well as an antioxidant. Thus, the present study aimed to investigate the potential neuroprotective effect of AA against Al neurotoxicity. Rats were orally administered aluminium chloride (AlCl3; 100 mg/kg b. wt.) dissolved in distilled water for 8 weeks or AA (75 mg/kg b. wt.) in combination with AlCl3. The results showed that AlCl3-intoxication causes significant impairment of memory, enhances anxiety-like behavior, acetyl cholinesterase (AChE) activity, malondialdehydes (MDA) level, and concomitant decrease in the activities of superoxide dismutase (SOD) and catalase (CAT) in the cortex and hippocampus regions of rat brain. In addition, AlCl3-intoxication enhanced neuronal loss and reactive astrogliosis in both regions. However, co-administration of AA with AlCl3 significantly attenuated the behavioral alterations, restored SOD and CAT activities, while reduced AChE activity and MDA content. Further, the study demonstrated that AA attenuates neuronal loss and reactive astrogliosis in rat brain. In conclusion, the study suggests that AA protects rat brain from Al neurotoxicity by inhibiting oxidative stress, neuronal loss and reactive astrogliosis.
Collapse
Affiliation(s)
- Jyoti Suryavanshi
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, 110067, New Delhi, India
| | - Chandra Prakash
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, 110067, New Delhi, India
| | - Deepak Sharma
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, 110067, New Delhi, India.
| |
Collapse
|
27
|
Ahlawat K, Jangra R, Chaturvedi S, Prakash C, Dixit A, Fulwani D, Gupta A, Jain N, Tak V, Prakash R. Photocatalytic oxidation conveyor "PCOC" system for large scale surface disinfection. Rev Sci Instrum 2022; 93:074101. [PMID: 35922331 DOI: 10.1063/5.0082222] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Accepted: 06/07/2022] [Indexed: 06/15/2023]
Abstract
In this paper, we present a surface decontamination system that substitutes traditional chemicals and scrubbing agents, which will be useful for the general public during a pandemic. The technique is based on a hybrid process in which UV-C light and its photons interact with metal oxide nano-catalysts to generate hydroxyl radicals, which can enhance the deactivation process, and the system can work even in the shadow regions via a dry process. The optimum number of UV light sources in combination with TiO2 nanoparticles catalysts on aluminum plates have been used synergistically in the system. The UV dose in the disinfection chamber has been optimized, which is between 60 and 500 mJ/cm2 throughout the disinfection chamber. The concentration of hydroxyl radicals is reported more than 25 000 ions/cm3 within the disinfection chamber. These ions are circulated throughout the disinfection volume. The disinfection efficiency has been tested on bacteria and spores, and the obtained results are correlated. Around 8 log reductions in the counts of the test bacteria of Escherichia coli and Klebsiella pneumoniae have been achieved in just 2 min of exposure in the continuous operation of the system. Tests have also been performed on Geobacillus stearothermophilus spores, and the method described here is the result of multiple tests, a review of the scientific literature, and the incorporation of current laboratory practice. The deactivation tested in the system is larger than that of known bacteria and viruses in terms of UV-doses, signifying its utility during the pandemic.
Collapse
Affiliation(s)
- Kiran Ahlawat
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| | - Ramavtar Jangra
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| | - Shivam Chaturvedi
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| | - Chandra Prakash
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| | - Ambesh Dixit
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| | - Deepak Fulwani
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| | - Ankur Gupta
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| | - Neha Jain
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| | - Vibhor Tak
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| | - Ram Prakash
- Indian Institute of Technology Jodhpur, Karwar, Jodhpur 342037, Rajasthan, India
| |
Collapse
|
28
|
Bakre M, Gunda A, Meershoek-Klein Kranenbarg E, Savitha B, Prakash C, Shrivastava P, Kaur T, Seynaeve C, Liefers GJ, Siraganahalli Eshwaraiah M, van de Velde C, Kuppen P. 9P Long term recurrence risk predictions by CanAssist breast in a sub-cohort of TEAM trial. Ann Oncol 2022. [DOI: 10.1016/j.annonc.2022.03.024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
|
29
|
Sethi D, Bharti S, Prakash C. A comprehensive survey on gait analysis: History, parameters, approaches, pose estimation, and future work. Artif Intell Med 2022; 129:102314. [DOI: 10.1016/j.artmed.2022.102314] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 04/28/2022] [Accepted: 04/29/2022] [Indexed: 11/15/2022]
|
30
|
Prakash C, Chhikara S, Kumar V. Mitochondrial Dysfunction in Arsenic-Induced Hepatotoxicity: Pathogenic and Therapeutic Implications. Biol Trace Elem Res 2022; 200:261-270. [PMID: 33566285 DOI: 10.1007/s12011-021-02624-2] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/23/2020] [Accepted: 02/01/2021] [Indexed: 12/16/2022]
Abstract
Mitochondria are vital cellular organelles associated with energy production as well as cell signaling pathways. These organelles, responsible for metabolism, are highly abundant in hepatocytes that make them key players in hepatotoxicity. The literature suggests that mitochondria are targeted by various environmental pollutants. Arsenic, a toxic metalloid known as an environmental pollutant, readily contaminates drinking water and exerts toxic effects. It is toxic to various cellular organs; among them, the liver seems to be most affected. A growing body of evidence suggests that within cells, arsenic is highly toxic to mitochondria and reported to cause oxidative stress and alter an array of signaling pathways and functions. Hence, it is imperative to highlight the mechanisms associated with altered mitochondrial functions and integrity in arsenic-induced liver toxicity. This review provides the details of mechanistic aspects of mitochondrial dysfunction in arsenic-induced hepatotoxicity as well as various ameliorative measures undertaken concerning mitochondrial functions.
Collapse
Affiliation(s)
- Chandra Prakash
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Sunil Chhikara
- Applied Sciences, UIET, Maharshi Dayanand University, Rohtak, Haryana, 124001, India
| | - Vijay Kumar
- Department of Biochemistry, Maharshi Dayanand University, Rohtak, Haryana, 124001, India.
| |
Collapse
|
31
|
Prakash C, Roy V, Charan P. Mitigating interorganizational conflicts in humanitarian logistics collaboration: the roles of contractual agreements, trust and post-disaster environmental uncertainty phases. IJLM 2021. [DOI: 10.1108/ijlm-06-2021-0318] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
PurposeGovernance is the key to establishing effective collaboration among humanitarian logistics partners addressing an ongoing relief work. With a focus on humanitarian interorganizational collaboration, this research draws on governance theories to investigate how conflicts can be mitigated in this challenging setting.Design/methodology/approachThe focus on governance extends attention to the frontiers of contractual agreement, trust and environmental uncertainty to be applied in the humanitarian setting. To develop perspectives, an online survey of 289 field executives working in humanitarian organizations across the globe is conducted. The findings are based on hierarchical regressions.FindingsEnvironmental uncertainty, in humanitarian logistics, is not straightforward, but wields distinctive challenges in the response phase (immediate to the disaster) as well as the recovery phase (beginning of build back) – to loom prospects of conflict between partners. Findings outline that contractual agreement can increase conflict during the response phase (high environmental uncertainty), but mitigate it during the recovery phase (low environmental uncertainty). Furthermore, contractual agreement interactively strengthens the ability of trust to reduce conflict. Yet, trust acting alone shows best outcome to mitigate conflict.Research limitations/implicationsContrary to the established understanding in traditional logistics suggesting the vitality of contracts to easily mitigate challenges posed by environmental uncertainty, the humanitarian setting extends a unique outset for interorganizational governance based on the temporality of response and recovery phases.Originality/valueThis research pioneers to quantitatively examine the setting of humanitarian logistics based on survey. Given the difficulty of data acquisition, the extant research has largely relied on qualitative investigations when considering the agenda of governance.
Collapse
|
32
|
Hariparsad N, Ramsden D, Taskar K, Badée J, Venkatakrishnan K, Reddy MB, Cabalu T, Mukherjee D, Rehmel J, Bolleddula J, Emami Riedmaier A, Prakash C, Chanteux H, Mao J, Umehara K, Shah K, De Zwart L, Dowty M, Kotsuma M, Li M, Pilla Reddy V, McGinnity DF, Parrott N. Current Practices, Gap Analysis, and Proposed Workflows for PBPK Modeling of Cytochrome P450 Induction: An Industry Perspective. Clin Pharmacol Ther 2021; 112:770-781. [PMID: 34862964 DOI: 10.1002/cpt.2503] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Accepted: 11/18/2021] [Indexed: 12/21/2022]
Abstract
The International Consortium for Innovation and Quality (IQ) Physiologically Based Pharmacokinetic (PBPK) Modeling Induction Working Group (IWG) conducted a survey across participating companies around general strategies for PBPK modeling of induction, including experience with its utility to address various questions, regulatory interactions, and regulatory acceptance. The results highlight areas where PBPK modeling is used with high confidence and identifies opportunities where confidence is lower and further evaluation is needed. To enhance the survey results, the PBPK-IWG also collected case studies and analyzed recent literature examples where PBPK models were applied to predict CYP3A induction-mediated drug-drug interactions. PBPK modeling of induction has evolved and progressed significantly, proving to have great potential to accelerate drug discovery and development. With the aim of enabling optimal use for new molecular entities that are either substrates and/or inducers of CYP3A, the PBPK-IWG proposes initial workflows for PBPK application, discusses future trends, and identifies gaps that need to be addressed.
Collapse
Affiliation(s)
- Niresh Hariparsad
- DMPK, Research and Early Development, Oncology R&D, AstraZeneca, Boston, Massachusetts, USA
| | - Diane Ramsden
- Takeda Development Center Americas, Inc., Cambridge, Massachusetts, USA
| | - Kunal Taskar
- Drug Metabolism and Pharmacokinetics, IVIVT, GlaxoSmithKline, Stevenage, UK
| | - Justine Badée
- PK Sciences, Novartis Institutes for Biomedical Research, Basel, Switzerland
| | - Karthik Venkatakrishnan
- EMD Serono Research & Development Institute, Inc, Billerica, Massachusetts, USA.,Merck KGaA, Darmstadt, Germany
| | - Micaela B Reddy
- Department of Clinical Pharmacology, Oncology, Pfizer, Boulder, Colorado, USA
| | | | - Dwaipayan Mukherjee
- Clinical Pharmacology & Pharmacometrics, AbbVie, Inc., North Chicago, Illinois, USA
| | - Jessica Rehmel
- Lilly Research Laboratories, Eli Lilly and Company, Indianapolis, Indiana, USA
| | - Jayaprakasam Bolleddula
- EMD Serono Research & Development Institute, Inc, Billerica, Massachusetts, USA.,Merck KGaA, Darmstadt, Germany
| | | | | | | | - Jialin Mao
- Department of Drug Metabolism and Pharmacokinetics, Genentech, A Member of the Roche Group, South San Francisco, California, USA
| | - Kenichi Umehara
- Pharmaceutical Sciences, Roche Pharma Research & Early Development, Roche Innovation Center Basel, Basel, Switzerland
| | - Kushal Shah
- Drug Metabolism and Pharmacokinetics, Vertex Pharmaceuticals Incorporated, Boston, Massachusetts, USA
| | | | - Martin Dowty
- Department of Pharmacokinetics, Dynamic, and Metabolism, Pfizer, Cambridge, Massachusetts, USA
| | - Masakatsu Kotsuma
- Quantitative Clinical Pharmacology, Daiichi-Sankyo, Inc., New Jersey, USA
| | - Mengyao Li
- Pharmacokinetics, Dynamics and Metabolism, Sanofi, Bridgewater, New Jersey, USA
| | - Venkatesh Pilla Reddy
- Clinical Pharmacology and Pharmacometrics, Biopharmaceuticals R&D, AstraZeneca, Cambridge, UK
| | - Dermot F McGinnity
- DMPK, Research and Early Development, Oncology R&D, AstraZeneca, Cambridge, UK
| | - Neil Parrott
- Pharmaceutical Sciences, Roche Pharma Research & Early Development, Roche Innovation Center Basel, Basel, Switzerland
| |
Collapse
|
33
|
Shukla AK, Behera SK, Prakash C, Tripathi A, Patra AK, Dwivedi BS, Trivedi V, Rao CS, Chaudhari SK, Das S, Singh AK. Deficiency of phyto-available sulphur, zinc, boron, iron, copper and manganese in soils of India. Sci Rep 2021; 11:19760. [PMID: 34611190 PMCID: PMC8492626 DOI: 10.1038/s41598-021-99040-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Accepted: 09/17/2021] [Indexed: 11/16/2022] Open
Abstract
Nutrient deficiencies in soil–crop contexts and inappropriate managements are the important reasons for low crop productivity, reduced nutritional quality of agricultural produce and animal/human malnutrition, across the world. The present investigation was carried out to evaluate nutrient deficiencies of sulphur (S) and micronutrients [zinc (Zn), boron (B), iron (Fe), copper (Cu) and manganese (Mn)] in agricultural soils of India for devising effective management strategies to achieve sustainable crop production, improved nutritional quality in crops and better animal/human health. A total of 2,42,827 surface (0–15 cm depth) soil samples were collected from agriculture fields of 615 districts lying in 28 states of India and were analysed for available S and micronutrients concentration. The study was carried out under the aegis of All India Coordinated Research Project on Micro- and Secondary-Nutrients and Pollutant Elements in Soils and Plants. The mean concentrations were 27.0 ± 29.9 mg kg−1 for available S, 1.40 ± 1.60 mg kg−1 for available Zn and 1.40 ± 4.70 mg kg−1 for available B, 31.0 ± 52.2 mg kg−1 for available Fe, 2.30 ± 3.50 mg kg−1 for available Cu and 17.5 ± 21.4 mg kg−1 for available Mn. There were variable and widespread deficiencies of S and micronutrients in different states. The deficiencies (acute deficient + deficient + latent deficiency) of S (58.6% of soils), Zn (51.2% of soils) and B (44.7% of soils) were higher compared to the deficiencies of Fe (19.2% of soils), Cu (11.4% of soils) and Mn (17.4% of soils). Out of 615 districts, > 50% of soils in 101, 131 and 86 districts were deficient in available S, available Zn and available B, respectively. Whereas, > 25% of soils in 83, 5 and 41 districts had deficiencies of available Fe, available Cu and available Mn, respectively. There were occurrences of 2-nutrients deficiencies such S + Zn (9.30% of soils), Zn + B (8.70% of soils), S + B (7.00% of soils) and Zn + Fe (5.80% of soils) to a greater extent compared to the deficiencies of Zn + Mn (3.40% of soils), S + Fe (3.30% of soils), Zn + Cu (2.80% of soils) and Fe + B (2.70% of soils). Relatively lower % of soils were deficient in 3-nutrients (namely S + Zn + B, S + Zn + B and Zn + Fe + B), 4-nutrients (namely Zn + Fe + Cu + Mn) and 5-nutrients (namely Zn + Fe + Cu + Mn + B) simultaneously. The information regarding the distribution of deficiencies of S and micronutrients (both single and multi-nutrients) could be used by various stakeholders for production, supply and application of right kind of fertilizers in different districts, states and agro-ecological regions of India for better crop production, crop nutritional quality, nutrient use efficiency, soil health and for tackling human and animal malnutrition.
Collapse
Affiliation(s)
- Arvind Kumar Shukla
- ICAR-Indian Institute of Soil Science, Bhopal, Madhya Pradesh, 462038, India
| | - Sanjib Kumar Behera
- ICAR-Indian Institute of Soil Science, Bhopal, Madhya Pradesh, 462038, India.
| | - Chandra Prakash
- ICAR-Indian Institute of Soil Science, Bhopal, Madhya Pradesh, 462038, India
| | - Ajay Tripathi
- ICAR-Indian Institute of Soil Science, Bhopal, Madhya Pradesh, 462038, India
| | - Ashok Kumar Patra
- ICAR-Indian Institute of Soil Science, Bhopal, Madhya Pradesh, 462038, India
| | - Brahma Swaroop Dwivedi
- ICAR-National Bureau of Soil Survey and Land Use Planning, Nagpur, Maharashtra, 440033, India
| | - Vivek Trivedi
- ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Ch Srinivasa Rao
- ICAR-National Academy of Agricultural Research Management, Hyderabad, Telangana, 500030, India
| | | | - Soumitra Das
- International Zinc Association, New Delhi, 110062, India
| | - Anil Kumar Singh
- Indian Council of Agricultural Research, New Delhi, 110012, India
| |
Collapse
|
34
|
Sevanthi AM, Sinha SK, V S, Rani M, Saini MR, Kumari S, Kaushik M, Prakash C, K V, Singh GP, Mohapatra T, Mandal PK. Integration of Dual Stress Transcriptomes and Major QTLs from a Pair of Genotypes Contrasting for Drought and Chronic Nitrogen Starvation Identifies Key Stress Responsive Genes in Rice. Rice (N Y) 2021; 14:49. [PMID: 34089405 PMCID: PMC8179884 DOI: 10.1186/s12284-021-00487-8] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Accepted: 05/05/2021] [Indexed: 05/19/2023]
Abstract
We report here the genome-wide changes resulting from low N (N-W+), low water (N+W-)) and dual stresses (N-W-) in root and shoot tissues of two rice genotypes, namely, IR 64 (IR64) and Nagina 22 (N22), and their association with the QTLs for nitrogen use efficiency. For all the root parameters, except for root length under N-W+, N22 performed better than IR64. Chlorophyll a, b and carotenoid content were higher in IR64 under N+W+ treatment and N-W+ and N+W- stresses; however, under dual stress, N22 had higher chlorophyll b content. While nitrite reductase, glutamate synthase (GS) and citrate synthase assays showed better specific activity in IR64, glutamate dehydrogenase showed better specific activity in N22 under dual stress (N-W-); the other N and C assimilating enzymes showed similar but low specific activities in both the genotypes. A total of 8926 differentially expressed genes (DEGs) were identified compared to optimal (N+W+) condition from across all treatments. While 1174, 698 and 903 DEGs in IR64 roots and 1197, 187 and 781 in N22 roots were identified, nearly double the number of DEGs were found in the shoot tissues; 3357, 1006 and 4005 in IR64 and 4004, 990 and 2143 in N22, under N-W+, N+W- and N-W- treatments, respectively. IR64 and N22 showed differential expression in 15 and 11 N-transporter genes respectively, under one or more stress treatments, out of which four showed differential expression also in N+W- condition. The negative regulators of N- stress, e.g., NIGT1, OsACTPK1 and OsBT were downregulated in IR64 while in N22, OsBT was not downregulated. Overall, N22 performed better under dual stress conditions owing to its better root architecture, chlorophyll and porphyrin synthesis and oxidative stress management. We identified 12 QTLs for seed and straw N content using 253 recombinant inbred lines derived from IR64 and N22 and a 5K SNP array. The QTL hotspot region on chromosome 6 comprised of 61 genes, of which, five were DEGs encoding for UDP-glucuronosyltransferase, serine threonine kinase, anthocyanidin 3-O-glucosyltransferase, and nitrate induced proteins. The DEGs, QTLs and candidate genes reported in this study can serve as a major resource for both rice improvement and functional biology.
Collapse
Affiliation(s)
| | - Subodh Kumar Sinha
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Sureshkumar V
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Manju Rani
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Manish Ranjan Saini
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Sapna Kumari
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Megha Kaushik
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Chandra Prakash
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Venkatesh K
- ICAR-Indian Institute of Wheat and Barley Research, Karnal, 132001, India
| | - G P Singh
- ICAR-Indian Institute of Wheat and Barley Research, Karnal, 132001, India
| | - Trilochan Mohapatra
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
- Indian Council of Agricultural Research, Krishi Bhavan, New Delhi, 110001, India
| | - Pranab Kumar Mandal
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India.
| |
Collapse
|
35
|
Bolleddula J, Ke A, Yang H, Prakash C. PBPK modeling to predict drug-drug interactions of ivosidenib as a perpetrator in cancer patients and qualification of the Simcyp platform for CYP3A4 induction. CPT Pharmacometrics Syst Pharmacol 2021; 10:577-588. [PMID: 33822485 PMCID: PMC8213421 DOI: 10.1002/psp4.12619] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Revised: 01/22/2021] [Accepted: 02/19/2021] [Indexed: 12/14/2022]
Abstract
Ivosidenib is a potent, targeted, orally active, small-molecule inhibitor of mutant isocitrate dehydrogenase 1 (IDH1) that has been approved in the United States for the treatment of adults with newly diagnosed acute myeloid leukemia (AML) who are greater than or equal to 75 years of age or ineligible for intensive chemotherapy, and those with relapsed or refractory AML, with a susceptible IDH1 mutation. Ivosidenib is an inducer of the CYP2B6, CYP2C8, CYP2C9, and CYP3A4 and an inhibitor of P-glycoprotein (P-gp), organic anion transporting polypeptide-1B1/1B3 (OATP1B1/1B3), and organic anion transporter-3 (OAT3) in vitro. A physiologically-based pharmacokinetic (PK) model was developed to predict drug-drug interactions (DDIs) of ivosidenib in patients with AML. The in vivo CYP3A4 induction effect of ivosidenib was quantified using 4β-hydroxycholesterol and was subsequently verified with the PK data from an ivosidenib and venetoclax combination study. The verified model was prospectively applied to assess the effect of multiple doses of ivosidenib on a sensitive CYP3A4 substrate, midazolam. The simulated midazolam geometric mean area under the curve (AUC) and maximum plasma concentration (Cmax ) ratios were 0.18 and 0.27, respectively, suggesting ivosidenib is a strong inducer. The model was also used to predict the DDIs of ivosidenib with CYP2B6, CYP2C8, CYP2C9, P-gp, OATP1B1/1B3, and OAT3 substrates. The AUC ratios following multiple doses of ivosidenib and a single dose of CYP2B6 (bupropion), CYP2C8 (repaglinide), CYP2C9 (warfarin), P-gp (digoxin), OATP1B1/1B3 (rosuvastatin), and OAT3 (methotrexate) substrates were 0.90, 0.52, 0.84, 1.01, 1.02, and 1.27, respectively. Finally, in accordance with regulatory guidelines, the Simcyp modeling platform was qualified to predict CYP3A4 induction using known inducers and sensitive substrates.
Collapse
Affiliation(s)
| | | | - Hua Yang
- Agios Pharmaceuticals, Inc, Cambridge, Massachusetts, USA
| | | |
Collapse
|
36
|
Prakash C, Mishra M, Kumar P, Kumar V, Sharma D. Response of Voltage-Gated Sodium and Calcium Channels Subtypes on Dehydroepiandrosterone Treatment in Iron-Induced Epilepsy. Cell Mol Neurobiol 2021; 41:279-292. [PMID: 32318899 DOI: 10.1007/s10571-020-00851-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Accepted: 04/14/2020] [Indexed: 12/28/2022]
Abstract
Epilepsy is a neurological disorder characterized by the occurrence of spontaneous and recurrent seizures. In post-traumatic epilepsy (PTE), the mechanism of epileptogenesis is very complex and seems to be linked with voltage-gated ion channels. Dehydroepiandrosterone (DHEA), a neurosteroid have shown beneficial effect against various neurological disorders. We investigated antiepileptic effect of DHEA with respect to expression of voltage-gated ion channels subtypes in iron-induced epilepsy. Iron (FeCl3) solution was intracartically injected to induce epilepsy in rats and DHEA was intraperitoneally administered for 21 days. Results showed markedly increased epileptiform seizures activity along with up-regulation of Nav1.1 and Nav1.6, and down-regulation of Cav2.1α at the mRNA and protein level in the cortex and hippocampus of epileptic rats. Moreover, the study demonstrated that these channels subtypes were predominantly expressed in the neurons. DHEA treatment has countered the epileptic seizures, down-regulated Nav1.1 and Nav1.6, and up-regulated Cav2.1α without affecting their cellular localization. In conclusion, the present study demonstrates antiepileptic potential of DHEA, escorted by regulation of Nav1.1, Nav1.6, and Cav2.1α subtypes in the neurons of iron-induced epileptic rats.
Collapse
Affiliation(s)
- Chandra Prakash
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Monika Mishra
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Pavan Kumar
- Department of Developmental Neurogenetics, Medical University of South Carolina, Charleston, SC, USA
| | - Vikas Kumar
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Deepak Sharma
- Neurobiology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India.
| |
Collapse
|
37
|
Kumar S, Prakash C, Chadha N, Jain K, Pandey P. Effect of Dietary Glycyrrhiza glabra on Growth and Haemato-Immunological Responses of Cirrhinus mrigala (Hamilton, 1822) Fingerlings. ANIM NUTR FEED TECHN 2021. [DOI: 10.5958/0974-181x.2021.00037.8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
38
|
Pramanik A, Basak AK, Littlefair G, Debnath S, Prakash C, Singh MA, Marla D, Singh RK. Methods and variables in Electrical discharge machining of titanium alloy - A review. Heliyon 2020; 6:e05554. [PMID: 33344787 PMCID: PMC7736727 DOI: 10.1016/j.heliyon.2020.e05554] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2020] [Revised: 07/02/2020] [Accepted: 11/16/2020] [Indexed: 11/16/2022] Open
Abstract
Titanium alloys are difficult to machine using conventional methods, therefore, nonconventional processes are often chosen in many applications. Electrical discharge machining (EDM) is one of those nonconventional processes that is used frequently for shaping titanium alloys with their respective pros and cons. However, a good understanding of this process is very difficult to achieve as research results are not properly connected and presented. Therefore, this study investigates different types of EDM processes such as, wire EDM, die-sink EDM, EDM drill and hybrid EDM used to machine titanium alloys. Machining mechanism, tool electrode, dielectric, materials removal rate (MRR), and surface integrity of all these processes are critically analysed and correlated based on the evidence accessible in literature. Machining process suffer from lower material removal rate and high tool wear while applied on titanium alloys. Formation of recast layer, heat affected zone and tool wear is common in all types of EDM processes. Additional challenge in wire EDM of titanium alloys is wire breakage under severe machining conditions. The formation of TiC and TiO2 are noticed in recast layer depending on the type of dielectrics. Removal of debris from small holes during EDM drilling is a challenge. All these restricts the applications EDMed titanium alloys in high-tech applications such as, aerospace and biomedical areas. Most of these challenges come up due to extraordinary properties such as, low thermal conductivity, high melting point and high hardness, of titanium alloys. Though hybrid EDM has been introduced and there is some work on simulation of EDM process, further developments in EDM of this alloy is required for widening the application of this methods.
Collapse
Affiliation(s)
- A Pramanik
- School of Civil and Mechanical Engineering, Curtin University, Bentley, WA, Australia
| | - A K Basak
- Adelaide Microscopy, The University of Adelaide, Adelaide, SA, Australia
| | - G Littlefair
- Faculty of Design and Creative Technologies, Auckland University of Technology, New Zealand
| | - S Debnath
- Department Mechanical Engineering, Curtin University Sarawak, Sarawak, Malaysia
| | - C Prakash
- School of Mechanical Engineering, Lovely Professional University, Phagwara, Punjab, India
| | | | - Deepak Marla
- Department of Mechanical Engineering, Indian Institute of Technology Bombay, India
| | - Ramesh Kumar Singh
- Department of Mechanical Engineering, Indian Institute of Technology Bombay, India
| |
Collapse
|
39
|
Prakash C, Fan B, Ke A, Le K, Yang H. Physiologically based pharmacokinetic modeling and simulation to predict drug-drug interactions of ivosidenib with CYP3A perpetrators in patients with acute myeloid leukemia. Cancer Chemother Pharmacol 2020; 86:619-632. [PMID: 32978634 DOI: 10.1007/s00280-020-04148-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2020] [Accepted: 09/10/2020] [Indexed: 11/26/2022]
Abstract
PURPOSE Develop a physiologically based pharmacokinetic (PBPK) model of ivosidenib using in vitro and clinical PK data from healthy participants (HPs), refine it with clinical data on ivosidenib co-administered with itraconazole, and develop a model for patients with acute myeloid leukemia (AML) and apply it to predict ivosidenib drug-drug interactions (DDI). METHODS An HP PBPK model was developed in Simcyp Population-Based Simulator (version 15.1), with the CYP3A4 component refined based on a clinical DDI study. A separate model accounting for the reduced apparent oral clearance in patients with AML was used to assess the DDI potential of ivosidenib as the victim of CYP3A perpetrators. RESULTS For a single 250 mg ivosidenib dose, the HP model predicted geometric mean ratios of 2.14 (plasma area under concentration-time curve, to infinity [AUC0-∞]) and 1.04 (maximum plasma concentration [Cmax]) with the strong CYP3A4 inhibitor, itraconazole, within 1.26-fold of the observed values (2.69 and 1.0, respectively). The AML model reasonably predicted the observed ivosidenib concentration-time profiles across all dose levels in patients. Predicted ivosidenib geometric mean steady-state AUC0-∞ and Cmax ratios were 3.23 and 2.26 with ketoconazole, and 1.90 and 1.52 with fluconazole, respectively. Co-administration of the strong CYP3A4 inducer, rifampin, predicted a greater DDI effect on a single dose of ivosidenib than on multiple doses (AUC ratios 0.35 and 0.67, Cmax ratios 0.91 and 0.81, respectively). CONCLUSION Potentially clinically relevant DDI effects with CYP3A4 inducers and moderate and strong inhibitors co-administered with ivosidenib were predicted. Considering the challenges of conducting clinical DDI studies in patients, this PBPK approach is valuable in ivosidenib DDI risk assessment and management.
Collapse
Affiliation(s)
| | - Bin Fan
- Agios Pharmaceuticals, Inc., Cambridge, MA, USA
| | - Alice Ke
- Certara UK Limited, Sheffield, UK
| | - Kha Le
- Agios Pharmaceuticals, Inc., Cambridge, MA, USA
| | - Hua Yang
- Agios Pharmaceuticals, Inc., Cambridge, MA, USA
| |
Collapse
|
40
|
Patil P, Bakre MM, Basavaraj C, Malpani S, Gunda A, Prakash C, Somashekhar S. CanAssist breast: An affordable breast cancer prognostic test validated on Asian patients. J Clin Oncol 2020. [DOI: 10.1200/jco.2020.38.15_suppl.541] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
541 Background: Treatment decisions for early stage HR+/HER2neu- breast cancer patients in the West routinely depend on prognostic tests that predict risk of recurrence. However, such tests are rarely used in Asia due to prohibitive costs and lack of validation data on Asian patients. Chemotherapy is thus often a default treatment leading to physiological and financial toxicity. To address these, we have developed CanAssist Breast (CAB) as an affordable IHC-based prognostic test, retrospectively validated on ~1400 patients, 63% South Asians and rest Caucasians. To date CAB has been prescribed by 180+ doctors across 30 cities in India for ~600 patients in clinics, enabling personalized treatment decisions. Methods: Primary surgical FFPE blocks and clinical follow-up data were obtained from hospitals. GraphPad Prism and MedCalc were respectively used for Kaplan-Meier survival analyses and Cox logistic regression to calculate hazard ratios. Results: The median age of diagnosis in the validation cohort was 56 years, 63% patients with stage II disease and 60% node negative tumors. Distant Metastasis Free Survival (DMFS) in the low-risk category of the validation cohort was 95%, and 84% in high-risk (P < 0.0001). Similar results were obtained with the Caucasian subgroup, as also with the chemotherapy-naive subgroup (30% of the cohort), demonstrating that risk stratification by CAB is unaffected by race or chemotherapy. Next, the performance of CAB was compared with Oncotype DX (ODX). 83% patients stratified as low risk by ODX (RS 0-25) in a sub-cohort of 109 were also stratified as low-risk by CAB. To assess the impact of CAB in treatment decision making, we assessed the data of 589 patients who have undergone CAB testing so far, 288 were identified as low-risk. 93% of these CAB low-risk patients were not given chemotherapy, demonstrating the clinical impact of CAB. Conclusions: CAB is the first test of its kind to be retrospectively validated in Asia. It shows high concordance with ODX in risk stratification of patients. CAB has been in clinical practice in India and near-India markets for 2 years and is helping clinicians and patients in making affordable treatment decisions.
Collapse
|
41
|
Abstract
Bioconjugation of therapeutic agents has been used as a selective drug delivery platform for many therapeutic areas. Bioconjugates are prepared by the covalent linkage of active compounds (small or large molecule) to a carrier molecule (lipids, proteins, peptides, carbohydrates, and polymers) through a chemical linker. The linkage of the active component to a carrier molecule enhances the therapeutic window through a targeted delivery and by reducing toxicity. Bioconjugates also possess improved pharmacokinetic properties such as a long half-life, increased stability, and cleavage by intracellular enzymes/environment. However, premature cleavage of the bioconjugates and the resulting metabolites/catabolites may produce undesirable toxic effects and, hence, it is critical to understand cleavage mechanisms, metabolism of bioconjugates, and translatability to human in the discovery stages. This article provides a comprehensive overview of linker cleavage pathways and catabolism/metabolism of antibody-drug conjugates, glycoconjugates, polymer-drug conjugates, lipid-drug conjugates, folate-targeted small molecule-drug conjugates, and drug-drug conjugates.
Collapse
Affiliation(s)
- Hanlan Liu
- KSQ Therapeutics Inc., Cambridge, MA, USA
| | | | | | | | | | | |
Collapse
|
42
|
Gopalakrishnan V, Sankaran S, SE M, Prakash C, Bakre MM. Impact of CanAssist-Breast in clinical treatment decisions in early stage HR+ breast cancer patients: Asian Scenario. J Glob Oncol 2019. [DOI: 10.1200/jgo.2019.5.suppl.109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
109 Background: The utility of multigene prognostic tests in aiding treatment decisions for early stage hormone positive breast cancer patients is well recognized. CanAssist-Breast (CAB) is an immunohistochemistry (IHC) based prognostic test that uses a proprietary algorithm to combine IHC grading of 5 biomarkers and three clinical paramaters (tumor size, node status and Grade) to stratify patients into high or low risk of distant recurrence. CAB has thus far been validated on a retrospective cohort of > 1000 predominantly Asian patients. Distant Metastasis Free Survival (DMFS) of more than 95% was observed with significant separation (P < 0.001) between low-risk and high-risk groups. In this study we demonstrate the usefulness of CanAssist-Breast (CAB) in guiding physicians assess risk of cancer recurrence and to make informed treatment decisions for patients. Methods: A total of 353 Asian patients tested by > 100 physicians were included in this study. Clinical parameters were compiled from hospital data. Treatment decisions were confirmed for > 150 of these patients assess the level of adherence. Risk prediction using the modified Adjuvant! Online protocol was used to compare with performance of CAB. Luminal subtying was performed as per the St. Gallen’s criteria. Results: Majority of patients tested had node negative, T2 and Grade 2 disease. Age and luminal subtypes did not affect the performance of CAB. On comparison with Adjuvant! Online (AOL), CAB categorized twice the number of patients into low-risk. Impact of CAB testing on treatment decisions showed that 96% of low-risk patients were not given chemotherapy and 84% of high-risk patients were given chemotherapy. Overall, we observed that 92% patients were either given or not given chemotherapy based on whether they were stratified as high-risk or low-risk for distant recurrence respectively. Conclusions: CAB stratifies higher percentage of patients into low risk group as compared to AOL. We observed wide acceptance of CAB as a prognostic test for assisting treatment decsions in clinical settings. CAB helped avoid chemotherapy in 70% of patients tested thus providing a cost effective alternative to other prognostic tests currently available.
Collapse
|
43
|
Prakash C, Gaur GK, D R P, Sahoo NR. Distribution analysis of single nucleotide polymorphisms related to feet and legs and their association with lameness in Vrindavani cattle. Trop Anim Health Prod 2019; 52:851-858. [PMID: 31520341 DOI: 10.1007/s11250-019-02076-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2019] [Accepted: 09/06/2019] [Indexed: 12/01/2022]
Abstract
Lameness is one of the most serious economic problems in dairy animals. The present study was undertaken to identify the SNPs associated with lameness in Vrindavani, a synthetic crossbred cattle developed in India. A total of 187 cows were screened for lameness at Cattle and Buffalo Farm, Indian Veterinary Research Institute, Izatnagar, India and 16.04% prevalence was noticed. The effect of age, body weight, parity, and peak yield was not significant on lameness score. Heritability estimate of lameness score was low (0.07 ± 0.01). A total of 90 Vrindavani cows were genotyped by PCR-RFLP for 10 SNPs that were reported to have association with feet and legs in cattle. Five SNPs displayed significant departure from Hardy Weinberg equilibrium. Varying levels of heterozygosity, polymorphic information content, and allelic diversity were noticed at different SNPs. Odds ratio and least squares analysis revealed a significant association (P < 0.05) of three SNPs with lameness in the herd. Cows with AG, TT, and GG genotypes respectively at rs41632254, rs41603160, and rs41636945 loci were less prone to lameness. These genetic markers would certainly aid in development of an early detection system for lameness.
Collapse
Affiliation(s)
- Chandra Prakash
- Animal Genetics Division, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, 243122, India
| | - Gyanendra Kumar Gaur
- Livestock Production and Management Section, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, 243122, India.
| | - Pruthviraj D R
- Animal Genetics Division, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, 243122, India
| | - Nihar Ranjan Sahoo
- Animal Genetics Division, Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, 243122, India
| |
Collapse
|
44
|
Singh C, Prakash C, Mishra P, Tiwari KN, Mishra SK, More RS, Kumar V, Singh J. Hepatoprotective efficacy of Premna integrifolia L. leaves against aflatoxin B1-induced toxicity in mice. Toxicon 2019; 166:88-100. [DOI: 10.1016/j.toxicon.2019.05.014] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2018] [Revised: 05/18/2019] [Accepted: 05/20/2019] [Indexed: 02/07/2023]
|
45
|
Singh SK, Tiwari VK, Chadha NK, Munilkumar S, Prakash C, Pawar NA. Effect of dietary synbiotic supplementation on growth, immune and physiological status of Labeo rohita juveniles exposed to low pH stress. Fish Shellfish Immunol 2019; 91:358-368. [PMID: 31085327 DOI: 10.1016/j.fsi.2019.05.023] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2019] [Revised: 05/04/2019] [Accepted: 05/10/2019] [Indexed: 06/09/2023]
Abstract
In this study, we investigated the effect of dietary Bacillus circulans PB7 (BCPB7) and fructoligosaccharide (FOS), used singly or in combination for evaluation of growth, immune and physiological status of Labeo rohita (rohu) juveniles reared under low pH and normal pH for 60 days. Experimental fishes were distributed in two sets such as one set continuously exposed to low pH (5.5) and other reared under normal pH (7.0), and fed with four iso-nitrogenous diets viz. basal (control), Bacillus circulans PB7 (BCPB7, 106 cfug-1), 1% fructooligosaccharide (FOS) and their combination. The effect of such pre, pro and synbiotics dietary treatments on growth performance (weight gain, specific growth rate, feed conversion ratio and protein efficiency ratio), immune response (hematological indices, serum biochemistry, lysozyme, NBT activity), antioxidative status in the form of antioxidant enzyme (catalase, superoxide dismutase, glutathione-S-transferase), acetylcholine esterase (AChE), Na+ K+ ATPase and stress bio-markers (cortisol, glucose and HSP-70) were examined. The group treated with low pH and fed with control diet (without supplementation) was found to be inhibited (p < 0.05) in growth and immuno-physiological function. However, supplementation of BCPB7 and FOS was non-significant (p < 0.05) on growth performance and physiological process but their concurrent feeding remarkably improved (p < 0.05) growth and immune-physiological function when exposed to low pH. Overall results indicate that dietary combination of BCPB7 and FOS can be considered an effective synbiotic formula against low pH stress in culture practices of L. rohita juveniles.
Collapse
Affiliation(s)
- Soibam Khogen Singh
- Aquaculture Division, ICAR-Central Institute of Fisheries Education, Mumbai-400061, Maharashtra, India; Department of Aquaculture, College of Fisheries, Central Agricultural University (Imphal), Lembucherra, Tripura West-799210, India.
| | - V K Tiwari
- Aquaculture Division, ICAR-Central Institute of Fisheries Education, Mumbai-400061, Maharashtra, India
| | - N K Chadha
- Aquaculture Division, ICAR-Central Institute of Fisheries Education, Mumbai-400061, Maharashtra, India
| | - Sukham Munilkumar
- ICAR-Central Institute of Fisheries Education, Kolkata Centre, Salt Lake, Kolkata, 70091, West Bengal, India
| | - Chandra Prakash
- Aquaculture Division, ICAR-Central Institute of Fisheries Education, Mumbai-400061, Maharashtra, India
| | - Nilesh A Pawar
- Aquaculture Division, ICAR-Central Institute of Fisheries Education, Mumbai-400061, Maharashtra, India
| |
Collapse
|
46
|
Gita S, Shukla SP, Saharan N, Prakash C, Deshmukhe G. Toxic Effects of Selected Textile Dyes on Elemental Composition, Photosynthetic Pigments, Protein Content and Growth of a Freshwater Chlorophycean Alga Chlorella vulgaris. Bull Environ Contam Toxicol 2019; 102:795-801. [PMID: 30927019 DOI: 10.1007/s00128-019-02599-w] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Accepted: 03/22/2019] [Indexed: 06/09/2023]
Abstract
Toxicity of three textile dyes-Optilan yellow, Drimarene blue and Lanasyn brown, was evaluated in a green alga Chlorella vulgaris. The unialgal populations of the alga showed a concentration-dependent decrease in specific growth rate and pigments after exposure to graded concentrations of above dyes. The elemental profile (C, H, N, S) of the treated and untreated cells showed a change which was evident from a significant decrease in the quantity of elements after exposure to the dyes. The observations provide convincing evidence that the textile dyes inhibited the growth, pigment and elemental composition of the algal cells. The findings of the present investigation will contribute to gaining a better understanding of the impacts of textile dyes on ecologically important aquatic organisms.
Collapse
Affiliation(s)
- Samchetshabam Gita
- Aquatic Environment and Health Management Division, ICAR-Central Institute of Fisheries Education, Mumbai, Maharashtra, 400061, India
| | - S P Shukla
- Aquatic Environment and Health Management Division, ICAR-Central Institute of Fisheries Education, Mumbai, Maharashtra, 400061, India.
| | - Neelam Saharan
- Aquatic Environment and Health Management Division, ICAR-Central Institute of Fisheries Education, Mumbai, Maharashtra, 400061, India
| | - Chandra Prakash
- Aquaculture Division, ICAR-Central Institute of Fisheries Education, Mumbai, Maharashtra, 400061, India
| | - Geetanjali Deshmukhe
- FRPHM division, ICAR-Central Institute of Fisheries Education, Mumbai, Maharashtra, 400061, India
| |
Collapse
|
47
|
Dai D, Yang H, Nabhan S, Liu H, Hickman D, Liu G, Zacher J, Vutikullird A, Prakash C, Agresta S, Bowden C, Fan B. Effect of itraconazole, food, and ethnic origin on the pharmacokinetics of ivosidenib in healthy subjects. Eur J Clin Pharmacol 2019; 75:1099-1108. [PMID: 31011758 DOI: 10.1007/s00228-019-02673-6] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2018] [Accepted: 03/21/2019] [Indexed: 10/27/2022]
Abstract
PURPOSE To assess the effect of ethnicity, food, and itraconazole (strong CYP3A4 inhibitor) on the pharmacokinetics of ivosidenib after single oral doses in healthy subjects. METHODS Three phase 1 open-label studies were performed. Study 1: Japanese and Caucasian subjects received single doses of 250, 500, or 1000 mg ivosidenib (NCT03071770). Part 1 of study 2 (a two-period crossover study): subjects received 500 mg ivosidenib after either an overnight fast or a high-fat meal. Subjects received 1000 mg ivosidenib after an overnight fast in the single period of part 2 (NCT02579707). Study 3: in period 1, subjects received 250 mg ivosidenib; then, in period 2, subjects received oral itraconazole (200 mg once daily) on days 1-18, plus 250 mg ivosidenib on day 5 (NCT02831972). RESULTS Ivosidenib was well tolerated in all three studies. Study 1: pharmacokinetic profiles were generally comparable, although AUC and Cmax were slightly lower in Japanese subjects than in Caucasian subjects, by ~ 30 and 17%, respectively. Study 2: AUC increased by ~ 25% and Cmax by ~ 98%, when ivosidenib was administered with a high-fat meal compared with a fasted state. Study 3: co-administration of itraconazole increased ivosidenib AUC by 169% (90% CI 145-195) but had no effect on ivosidenib Cmax. CONCLUSIONS No ivosidenib dose adjustment is deemed necessary for Japanese subjects. High-fat meals should be avoided when ivosidenib is taken with food. When co-administered with strong CYP3A4 inhibitors, monitoring for QT interval prolongation (a previously defined adverse event of interest) is recommended and an ivosidenib dose interruption or reduction may be considered. CLINICALTRIALS.GOV : NCT03071770, NCT02579707, and NCT02831972.
Collapse
Affiliation(s)
- David Dai
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA
| | - Hua Yang
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA
| | - Salah Nabhan
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA
| | - Hua Liu
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA
| | - Denice Hickman
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA
| | - Guowen Liu
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA
| | | | | | - Chandra Prakash
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA
| | - Samuel Agresta
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA.,Infinity Pharmaceuticals, Inc., Cambridge, MA, USA
| | - Chris Bowden
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA
| | - Bin Fan
- Agios Pharmaceuticals, Inc., 88 Sidney Street, Cambridge, MA, 02139, USA.
| |
Collapse
|
48
|
Bakre MM, Ramkumar C, Attuluri AK, Basavaraj C, Prakash C, Buturovic L, Madhav L, Naidu N, R P, Somashekhar SP, Gupta S, Doval DC, Pegram MD. Clinical validation of an immunohistochemistry-based CanAssist-Breast test for distant recurrence prediction in hormone receptor-positive breast cancer patients. Cancer Med 2019; 8:1755-1764. [PMID: 30848103 PMCID: PMC6488210 DOI: 10.1002/cam4.2049] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Revised: 01/16/2019] [Accepted: 02/05/2019] [Indexed: 01/03/2023] Open
Abstract
CanAssist‐Breast (CAB) is an immunohistochemistry (IHC)‐based prognostic test for early‐stage Hormone Receptor (HR+)‐positive breast cancer patients. CAB uses a Support Vector Machine (SVM) trained algorithm which utilizes expression levels of five biomarkers (CD44, ABCC4, ABCC11, N‐Cadherin, and Pan‐Cadherin) and three clinical parameters such as tumor size, grade, and node status as inputs to generate a risk score and categorizes patients as low‐ or high‐risk for distant recurrence within 5 years of diagnosis. In this study, we present clinical validation of CAB. CAB was validated using a retrospective cohort of 857 patients. All patients were treated either with endocrine therapy or chemoendocrine therapy. Risk categorization by CAB was analyzed by calculating Distant Metastasis‐Free Survival (DMFS) and recurrence rates using Kaplan‐Meier survival curves. Multivariate analysis was performed to calculate Hazard ratios (HR) for CAB high‐risk vs low‐risk patients. The results showed that Distant Metastasis‐Free Survival (DMFS) was significantly different (P‐0.002) between low‐ (DMFS: 95%) and high‐risk (DMFS: 80%) categories in the endocrine therapy treated alone subgroup (n = 195) as well as in the total cohort (n = 857, low‐risk DMFS: 95%, high‐risk DMFS: 84%, P < 0.0001). In addition, the segregation of the risk categories was significant (P = 0.0005) in node‐positive patients, with a difference in DMFS of 12%. In multivariate analysis, CAB risk score was the most significant predictor of distant recurrence with hazard ratio of 3.2048 (P < 0.0001). CAB stratified patients into discrete risk categories with high statistical significance compared to Ki‐67 and IHC4 score‐based stratification. CAB stratified a higher percentage of the cohort (82%) as low‐risk than IHC4 score (41.6%) and could re‐stratify >74% of high Ki‐67 and IHC4 score intermediate‐risk zone patients into low‐risk category. Overall the data suggest that CAB can effectively predict risk of distant recurrence with clear dichotomous high‐ or low‐risk categorization.
Collapse
Affiliation(s)
| | | | | | | | | | | | | | | | - Prathima R
- OncoStem Diagnostics Private Limited, Bangalore, India
| | - S P Somashekhar
- Manipal Hospital and Comprehensive Cancer Centre, Bangalore, India
| | | | | | - Mark D Pegram
- Stanford University Medical Center, Palo Alto, California
| |
Collapse
|
49
|
Prakash C, Chen Y, Fan B, Dai D, Le K, Ke A, Attar E, Yang H. Physiologically based pharmacokinetic model predictions of ivosidenib (AG-120) as a victim and perpetrator of drug–drug interactions. Drug Metab Pharmacokinet 2019. [DOI: 10.1016/j.dmpk.2018.09.238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
|
50
|
Gupta N, Prakash C, Chakrabarty K, Giri U, Patel A, Choudhary S. Potential Advantages of Bone Marrow Sparing IMRT in Cancer Cervix: A Dosimetric Evaluation. J Clin Diagn Res 2019. [DOI: 10.7860/jcdr/2019/39841.12745] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|