1
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Martynowycz MW, Andreev K, Mor A, Gidalevitz D. Cancer-Associated Gangliosides as a Therapeutic Target for Host Defense Peptide Mimics. Langmuir 2023; 39:12541-12549. [PMID: 37647566 DOI: 10.1021/acs.langmuir.3c01008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
Aberrant levels of glycolipids expressed on cellular surfaces are characteristic of different types of cancers. The oligomer of acylated lysine (OAK) mimicking antimicrobial peptides displays in vitro activity against human and murine melanoma cell lines with upregulated GD3 and GM3 gangliosides. Herein, we demonstrate the capability of OAK to intercalate into the sialo-oligosaccharides of DPPC/GD3 and DPPC/GM3 lipid monolayers using X-ray scattering. The lack of insertion into monolayers containing phosphatidylserine suggests that the mechanism of action by OAKs against glycosylated lipid membranes is not merely driven by charge effects. The fluorescence microscopy data demonstrates the membrane-lytic activity of OAK. Understanding the molecular basis for selectivity toward GD3 and GM3 gangliosides by antimicrobial lipopeptides will contribute to the development of novel therapies to cure melanoma and other malignancies.
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Affiliation(s)
- Michael W Martynowycz
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 10 W 35th Street, Chicago, Illinois 60616, United States
| | - Konstantin Andreev
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 10 W 35th Street, Chicago, Illinois 60616, United States
| | - Amram Mor
- Department of Biotechnology and Food Engineering, Technion─Israel Institute of Technology, Technion City, Haifa 32000, Israel
| | - David Gidalevitz
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 10 W 35th Street, Chicago, Illinois 60616, United States
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2
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Dayeen FR, Brandner BA, Hall SB, Gidalevitz D. Role of cholesterol in pulmonary surfactant at ambient and physiological temperatures. Biophys J 2023; 122:84a. [PMID: 36785044 DOI: 10.1016/j.bpj.2022.11.657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/12/2023] Open
Affiliation(s)
- Fazle R Dayeen
- Department of Physics, Illinois Institute of Technology, Chicago, IL, USA
| | - Bret A Brandner
- Department of Pulmonary and Critical Care Medicine, Oregon Health & Science University, Portland, OR, USA
| | - Stephen B Hall
- Department of Pulmonary and Critical Care Medicine, Oregon Health & Science University, Portland, OR, USA
| | - David Gidalevitz
- Department of Physics, Illinois Institute of Technology, Chicago, IL, USA
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3
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Dayeen FR, Brandner BA, Martynowycz MW, Kucuk K, Foody MJ, Bu W, Hall SB, Gidalevitz D. Effects of cholesterol on the structure and collapse of DPPC monolayers. Biophys J 2022; 121:3533-3541. [PMID: 35841141 PMCID: PMC9515002 DOI: 10.1016/j.bpj.2022.07.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2022] [Revised: 06/02/2022] [Accepted: 07/05/2022] [Indexed: 11/29/2022] Open
Abstract
Cholesterol induces faster collapse by compressed films of pulmonary surfactant. Because collapse prevents films from reaching the high surface pressures achieved in the alveolus, most therapeutic surfactants remove or omit cholesterol. The studies here determined the structural changes by which cholesterol causes faster collapse by films of dipalmitoyl phosphatidylcholine, used as a simple model for the functional alveolar film. Measurements of isobaric collapse, with surface pressure held constant at 52 mN/m, showed that cholesterol had little effect until the mol fraction of cholesterol, Xchol, exceeded 0.20. Structural measurements of grazing incidence X-ray diffraction at ambient laboratory temperatures and a surface pressure of 44 mN/m, just below the onset of collapse, showed that the major structural change in an ordered phase occurred at lower Xchol. A centered rectangular unit cell with tilted chains converted to an untilted hexagonal structure over the range of Xchol = 0.0-0.1. For Xchol = 0.1-0.4, the ordered structure was nearly invariant; the hexagonal unit cell persisted, and the spacing of the chains was essentially unchanged. That invariance strongly suggests that above Xchol = 0.1, cholesterol partitions into a disordered phase, which coexists with the ordered domains. The phase rule requires that for a binary film with coexisting phases, the stoichiometries of the ordered and disordered regions must remain constant. Added cholesterol must increase the area of the disordered phase at the expense of the ordered regions. X-ray scattering from dipalmitoyl phosphatidylcholine/cholesterol fit with that prediction. The data also show a progressive decrease in the size of crystalline domains. Our results suggest that cholesterol promotes adsorption not by altering the unit cell of the ordered phase but by decreasing both its total area and the size of individual crystallites.
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Affiliation(s)
- Fazle R Dayeen
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, Chicago, Illinois
| | - Bret A Brandner
- Pulmonary & Critical Care Medicine, Oregon Health & Science University, Portland, Oregon
| | - Michael W Martynowycz
- Howard Hughes Medical Institute and Department of Biological Chemistry, University of California Los Angeles, Los Angeles, California
| | - Kamil Kucuk
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, Chicago, Illinois
| | - Michael J Foody
- Department of Chemistry, Illinois Institute of Technology, Chicago, Illinois
| | - Wei Bu
- NSF's ChemMatCARS, Pritzker School of Molecular Engineering, University of Chicago, Chicago, Illinois
| | - Stephen B Hall
- Pulmonary & Critical Care Medicine, Oregon Health & Science University, Portland, Oregon.
| | - David Gidalevitz
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, Chicago, Illinois.
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4
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Dayeen F, Brandner B, Hall SB, Gidalevitz D. The interfacial structure of pulmonary surfactant at physiological temperatures. Biophys J 2022. [DOI: 10.1016/j.bpj.2021.11.351] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022] Open
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5
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Andreev K, Martynowycz MW, Kuzmenko I, Bu W, Hall SB, Gidalevitz D. Structural Changes in Films of Pulmonary Surfactant Induced by Surfactant Vesicles. Langmuir 2020; 36:13439-13447. [PMID: 33080138 PMCID: PMC8754419 DOI: 10.1021/acs.langmuir.0c01813] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
When compressed by the shrinking alveolar surface area during exhalation, films of pulmonary surfactant in situ reduce surface tension to levels at which surfactant monolayers collapse from the surface in vitro. Vesicles of pulmonary surfactant added below these monolayers slow collapse. X-ray scattering here determined the structural changes induced by the added vesicles. Grazing incidence X-ray diffraction on monolayers of extracted calf surfactant detected an ordered phase. Mixtures of dipalmitoyl phosphatidylcholine and cholesterol, but not the phospholipid alone, mimic that structure. At concentrations that stabilize the monolayers, vesicles in the subphase had no effect on the unit cell, and X-ray reflection showed that the film remained monomolecular. The added vesicles, however, produced a concentration-dependent increase in the diffracted intensity. These results suggest that the enhanced resistance to collapse results from enlargement by the additional material of the ordered phase.
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Affiliation(s)
- Konstantin Andreev
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, Chicago, Illinois 60616, United States
| | - Michael W Martynowycz
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, Chicago, Illinois 60616, United States
- X-ray Science Division, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
| | - Ivan Kuzmenko
- X-ray Science Division, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
| | - Wei Bu
- The Center for Advanced Radiation Sources (CARS), University of Chicago, Chicago, Illinois 60637, United States
| | - Stephen B Hall
- Pulmonary & Critical Care Medicine, Oregon Health & Science University, Portland, Oregon 97239, United States
| | - David Gidalevitz
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, Chicago, Illinois 60616, United States
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Martynowycz MW, Rice A, Andreev K, Nobre TM, Kuzmenko I, Wereszczynski J, Gidalevitz D. Salmonella Membrane Structural Remodeling Increases Resistance to Antimicrobial Peptide LL-37. ACS Infect Dis 2019; 5:1214-1222. [PMID: 31083918 DOI: 10.1021/acsinfecdis.9b00066] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Gram-negative bacteria are protected from their environment by an outer membrane that is primarily composed of lipopolysaccharides (LPSs). Under stress, pathogenic serotypes of Salmonella enterica remodel their LPSs through the PhoPQ two-component regulatory system that increases resistance to both conventional antibiotics and antimicrobial peptides (AMPs). Acquired resistance to AMPs is contrary to the established narrative that AMPs circumvent bacterial resistance by targeting the general chemical properties of membrane lipids. However, the specific mechanisms underlying AMP resistance remain elusive. Here we report a 2-fold increase in bacteriostatic concentrations of human AMP LL-37 for S. enterica with modified LPSs. LPSs with and without chemical modifications were isolated and investigated by Langmuir films coupled with grazing-incidence X-ray diffraction (GIXD) and specular X-ray reflectivity (XR). The initial interactions between LL-37 and LPS bilayers were probed using all-atom molecular dynamics simulations. These simulations suggest that initial association is nonspecific to the type of LPS and governed by hydrogen bonding to the LPS outer carbohydrates. GIXD experiments indicate that the interactions of the peptide with monolayers reduce the number of crystalline domains but greatly increase the typical domain size in both LPS isoforms. Electron densities derived from XR experiments corroborate the bacteriostatic values found in vitro and indicate that peptide intercalation is reduced by LPS modification. We hypothesize that defects at the liquid-ordered boundary facilitate LL-37 intercalation into the outer membrane, whereas PhoPQ-mediated LPS modification protects against this process by having innately increased crystallinity. Since induced ordering has been observed with other AMPs and drugs, LPS modification may represent a general mechanism by which Gram-negative bacteria protect against host innate immunity.
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Affiliation(s)
- Michael W. Martynowycz
- Department of Physics and Center for Molecular Study of Condensed Soft Matter, Illinois Institute of Technology, 10 West 35th Street, Chicago, Illinois 60616, United States
- X-ray Science Division, Advanced Photon Source, Argonne National Laboratory, Building 401, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
| | - Amy Rice
- Department of Physics and Center for Molecular Study of Condensed Soft Matter, Illinois Institute of Technology, 10 West 35th Street, Chicago, Illinois 60616, United States
| | - Konstantin Andreev
- Department of Physics and Center for Molecular Study of Condensed Soft Matter, Illinois Institute of Technology, 10 West 35th Street, Chicago, Illinois 60616, United States
| | - Thatyane M. Nobre
- Departamento de Fisica e Ciecias dos Materiais, Instituto de Fisica de São Carlos, 400 Parque Arnold Schimidt, 13566-590 São Carlos-SP, Brazil
| | - Ivan Kuzmenko
- X-ray Science Division, Advanced Photon Source, Argonne National Laboratory, Building 401, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
| | - Jeff Wereszczynski
- Department of Physics and Center for Molecular Study of Condensed Soft Matter, Illinois Institute of Technology, 10 West 35th Street, Chicago, Illinois 60616, United States
| | - David Gidalevitz
- Department of Physics and Center for Molecular Study of Condensed Soft Matter, Illinois Institute of Technology, 10 West 35th Street, Chicago, Illinois 60616, United States
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7
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Andreev K, Martynowycz MW, Gidalevitz D. Peptoid drug discovery and optimization via surface X-ray scattering. Biopolymers 2019; 110:e23274. [PMID: 30892696 PMCID: PMC6661014 DOI: 10.1002/bip.23274] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2018] [Revised: 03/01/2019] [Accepted: 03/04/2019] [Indexed: 12/31/2022]
Abstract
Synthetic polymers mimicking antimicrobial peptides have drawn considerable interest as potential therapeutics. N-substituted glycines, or peptoids, are recognized by their in vivo stability and ease of synthesis. Peptoids are thought to act primarily on the negatively charged lipids that are abundant in bacterial cell membranes. A mechanistic understanding of lipid-peptoid interaction at the molecular level will provide insights for rational design and optimization of peptoids. Here, we highlight recent studies that utilize synchrotron liquid surface X-ray scattering to characterize the underlying peptoid interactions with bacterial and eukaryotic membranes. Cellular membranes are highly complex, and difficult to characterize at the molecular level. Model systems including Langmuir monolayers, are used in these studies to reduce system complexity. The general workflow of these systems and the corresponding data analysis techniques are presented alongside recent findings. These studies investigate the role of peptoid physicochemical characteristics on membrane activity. Specifically, the roles of cationic charge, conformational constraint via macrocyclization, and hydrophobicity are shown to correlate their membrane interactions to biological activities in vitro. These structure-activity relationships have led to new insights into the mechanism of action by peptoid antimicrobials, and suggest optimization strategies for future therapeutics based on peptoids.
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Affiliation(s)
- Konstantin Andreev
- Howard Hughes Medical Institute, Northwestern University, Evanston, Illinois
| | | | - David Gidalevitz
- Center for the Molecular Study of Condensed Soft Matter and Department of Physics, Illinois Institute of Technology, Chicago, Illinois
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8
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Andreev K, Martynowycz MW, Lingaraju M, Bianchi C, Mor A, Gidalevitz D. Antimicrobial Peptidomimetics with Activity Towards Cancer Cells. Biophys J 2019. [DOI: 10.1016/j.bpj.2018.11.505] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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9
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Andreev K, Martynowycz MW, Huang ML, Kuzmenko I, Bu W, Kirshenbaum K, Gidalevitz D. Hydrophobic interactions modulate antimicrobial peptoid selectivity towards anionic lipid membranes. Biochim Biophys Acta Biomembr 2018; 1860:1414-1423. [PMID: 29621496 DOI: 10.1016/j.bbamem.2018.03.021] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2017] [Revised: 03/15/2018] [Accepted: 03/26/2018] [Indexed: 12/21/2022]
Abstract
Hydrophobic interactions govern specificity for natural antimicrobial peptides. No such relationship has been established for synthetic peptoids that mimic antimicrobial peptides. Peptoid macrocycles synthesized with five different aromatic groups are investigated by minimum inhibitory and hemolytic concentration assays, epifluorescence microscopy, atomic force microscopy, and X-ray reflectivity. Peptoid hydrophobicity is determined using high performance liquid chromatography. Disruption of bacterial but not eukaryotic lipid membranes is demonstrated on the solid supported lipid bilayers and Langmuir monolayers. X-ray reflectivity studies demonstrate that intercalation of peptoids with zwitterionic or negatively charged lipid membranes is found to be regulated by hydrophobicity. Critical levels of peptoid selectivity are demonstrated and found to be modulated by their hydrophobic groups. It is suggested that peptoids may follow different optimization schemes as compared to their natural analogues.
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Affiliation(s)
- Konstantin Andreev
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 3440 South Dearborn Street, Chicago, IL 60616, United States
| | - Michael W Martynowycz
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 3440 South Dearborn Street, Chicago, IL 60616, United States; Advanced Photon Source, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, IL 60439, United States
| | - Mia L Huang
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY 10003, United States
| | - Ivan Kuzmenko
- Advanced Photon Source, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, IL 60439, United States
| | - Wei Bu
- The Center for Advanced Radiation Sources (CARS), University of Chicago, Chicago, IL 60637, United States
| | - Kent Kirshenbaum
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY 10003, United States
| | - David Gidalevitz
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 3440 South Dearborn Street, Chicago, IL 60616, United States.
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10
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Andreev K, Martynowycz MW, Ivankin A, Huang ML, Kuzmenko I, Meron M, Lin B, Kirshenbaum K, Gidalevitz D. Cyclization Improves Membrane Permeation by Antimicrobial Peptoids. Langmuir 2016; 32:12905-12913. [PMID: 27793068 PMCID: PMC9647730 DOI: 10.1021/acs.langmuir.6b03477] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
The peptidomimetic approach has emerged as a powerful tool for overcoming the inherent limitations of natural antimicrobial peptides, where the therapeutic potential can be improved by increasing the selectivity and bioavailability. Restraining the conformational flexibility of a molecule may reduce the entropy loss upon its binding to the membrane. Experimental findings demonstrate that the cyclization of linear antimicrobial peptoids increases their bactericidal activity against Staphylococcus aureus while maintaining high hemolytic concentrations. Surface X-ray scattering shows that macrocyclic peptoids intercalate into Langmuir monolayers of anionic lipids with greater efficacy than for their linear analogues. It is suggested that cyclization may increase peptoid activity by allowing the macrocycle to better penetrate the bacterial cell membrane.
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Affiliation(s)
- Konstantin Andreev
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 3440 South Dearborn Street, Chicago, Illinois 60616, United States
| | - Michael W. Martynowycz
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 3440 South Dearborn Street, Chicago, Illinois 60616, United States
- Advanced Photon Source, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
| | - Andrey Ivankin
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 3440 South Dearborn Street, Chicago, Illinois 60616, United States
| | - Mia L. Huang
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - Ivan Kuzmenko
- Advanced Photon Source, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, Illinois 60439, United States
| | - Mati Meron
- The Center for Advanced Radiation Sources (CARS), University of Chicago, Chicago, Illinois 60637, United States
| | - Binhua Lin
- The Center for Advanced Radiation Sources (CARS), University of Chicago, Chicago, Illinois 60637, United States
| | - Kent Kirshenbaum
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - David Gidalevitz
- Department of Physics, Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, 3440 South Dearborn Street, Chicago, Illinois 60616, United States
- Corresponding Author: Fax: (+1) 312-567-8856.
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11
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Nobre TM, Martynowycz MW, Andreev K, Kuzmenko I, Nikaido H, Gidalevitz D. Modification of Salmonella Lipopolysaccharides Prevents the Outer Membrane Penetration of Novobiocin. Biophys J 2016; 109:2537-2545. [PMID: 26682812 DOI: 10.1016/j.bpj.2015.10.013] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2015] [Revised: 09/23/2015] [Accepted: 10/08/2015] [Indexed: 11/29/2022] Open
Abstract
Small hydrophilic antibiotics traverse the outer membrane of Gram-negative bacteria through porin channels. Large lipophilic agents traverse the outer membrane through its bilayer, containing a majority of lipopolysaccharides in its outer leaflet. Genes controlled by the two-component regulatory system PhoPQ modify lipopolysaccharides. We isolate lipopolysaccharides from isogenic mutants of Salmonella sp., one lacking the modification, the other fully modified. These lipopolysaccharides were reconstituted as monolayers at the air-water interface, and their properties, as well as their interaction with a large lipophilic drug, novobiocin, was studied. X-ray reflectivity showed that the drug penetrated the monolayer of the unmodified lipopolysaccharides reaching the hydrophobic region, but was prevented from this penetration into the modified lipopolysaccharides. Results correlate with behavior of bacterial cells, which become resistant to antibiotics after PhoPQ-regulated modifications. Grazing incidence x-ray diffraction showed that novobiocin produced a striking increase in crystalline coherence length, and the size of the near-crystalline domains.
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Affiliation(s)
- Thatyane M Nobre
- Department of Molecular and Cell Biology, University of California at Berkeley, Berkeley, California; Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, California.
| | - Michael W Martynowycz
- Center for Molecular Study of Condensed Soft Matter and Department of Physics, Illinois Institute of Technology, Chicago, Illinois; X-ray Science Division, Advanced Photon Source, Argonne National Laboratory, Lemont, Illinois
| | - Konstantin Andreev
- Center for Molecular Study of Condensed Soft Matter and Department of Physics, Illinois Institute of Technology, Chicago, Illinois
| | - Ivan Kuzmenko
- X-ray Science Division, Advanced Photon Source, Argonne National Laboratory, Lemont, Illinois
| | - Hiroshi Nikaido
- Department of Molecular and Cell Biology, University of California at Berkeley, Berkeley, California
| | - David Gidalevitz
- Center for Molecular Study of Condensed Soft Matter and Department of Physics, Illinois Institute of Technology, Chicago, Illinois.
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12
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Martynowycz MW, Hu B, Kuzmenko I, Bu W, Hock A, Gidalevitz D. Monomolecular Siloxane Film as a Model of Single Site Catalysts. J Am Chem Soc 2016; 138:12432-9. [DOI: 10.1021/jacs.6b05711] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
| | | | - Ivan Kuzmenko
- Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Wei Bu
- Center
for Advanced Radiation Sources, University of Chicago, Chicago, Illinois 60637, United States
| | - Adam Hock
- Argonne National Laboratory, Lemont, Illinois 60439, United States
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13
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Feinstein DL, Akpa BS, Ayee MA, Boullerne AI, Braun D, Brodsky SV, Gidalevitz D, Hauck Z, Kalinin S, Kowal K, Kuzmenko I, Lis K, Marangoni N, Martynowycz MW, Rubinstein I, van Breemen R, Ware K, Weinberg G. The emerging threat of superwarfarins: history, detection, mechanisms, and countermeasures. Ann N Y Acad Sci 2016; 1374:111-22. [PMID: 27244102 DOI: 10.1111/nyas.13085] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2016] [Revised: 04/04/2016] [Accepted: 04/08/2016] [Indexed: 12/11/2022]
Abstract
Superwarfarins were developed following the emergence of warfarin resistance in rodents. Compared to warfarin, superwarfarins have much longer half-lives and stronger affinity to vitamin K epoxide reductase and therefore can cause death in warfarin-resistant rodents. By the mid-1970s, the superwarfarins brodifacoum and difenacoum were the most widely used rodenticides throughout the world. Unfortunately, increased use was accompanied by a rise in accidental poisonings, reaching >16,000 per year in the United States. Risk of exposure has become a concern since large quantities, up to hundreds of kilograms of rodent bait, are applied by aerial dispersion over regions with rodent infestations. Reports of intentional use of superwarfarins in civilian and military scenarios raise the specter of larger incidents or mass casualties. Unlike warfarin overdose, for which 1-2 days of treatment with vitamin K is effective, treatment of superwarfarin poisoning with vitamin K is limited by extremely high cost and can require daily treatment for a year or longer. Furthermore, superwarfarins have actions that are independent of their anticoagulant effects, including both vitamin K-dependent and -independent effects, which are not mitigated by vitamin K therapy. In this review, we summarize superwarfarin development, biology and pathophysiology, their threat as weapons, and possible therapeutic approaches.
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Affiliation(s)
- Douglas L Feinstein
- Department of Anesthesiology, University of Illinois, Chicago, Illinois.,Jesse Brown VA Medical Center, Chicago, Illinois
| | - Belinda S Akpa
- Department of Molecular Biomedical Sciences, North Carolina State University, Raleigh, North Carolina
| | - Manuela A Ayee
- Department of Medicine, University of Illinois, Chicago, Illinois
| | - Anne I Boullerne
- Department of Anesthesiology, University of Illinois, Chicago, Illinois.,Jesse Brown VA Medical Center, Chicago, Illinois
| | - David Braun
- Department of Anesthesiology, University of Illinois, Chicago, Illinois
| | - Sergey V Brodsky
- Department of Pathology, the Ohio State University, Columbus, Ohio
| | - David Gidalevitz
- Department of Physics and the Center for the Molecular Study of Condensed Soft Matter, Illinois Institute of Technology, Chicago, Illinois
| | - Zane Hauck
- Department of Medicinal Chemistry and Pharmacognosy, University of Illinois, Chicago, Illinois
| | - Sergey Kalinin
- Department of Anesthesiology, University of Illinois, Chicago, Illinois
| | - Kathy Kowal
- Department of Anesthesiology, University of Illinois, Chicago, Illinois
| | - Ivan Kuzmenko
- X-ray Science Division, Argonne National Laboratory, Lemont, Illinois
| | - Kinga Lis
- Department of Anesthesiology, University of Illinois, Chicago, Illinois
| | - Natalia Marangoni
- Department of Anesthesiology, University of Illinois, Chicago, Illinois
| | - Michael W Martynowycz
- Department of Physics and the Center for the Molecular Study of Condensed Soft Matter, Illinois Institute of Technology, Chicago, Illinois.,X-ray Science Division, Argonne National Laboratory, Lemont, Illinois
| | - Israel Rubinstein
- Department of Anesthesiology, University of Illinois, Chicago, Illinois.,Department of Medicine, University of Illinois, Chicago, Illinois
| | | | - Kyle Ware
- Department of Pathology, the Ohio State University, Columbus, Ohio
| | - Guy Weinberg
- Department of Anesthesiology, University of Illinois, Chicago, Illinois.,Jesse Brown VA Medical Center, Chicago, Illinois
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14
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Andreev K, Bianchi C, Laursen JS, Citterio L, Hein-Kristensen L, Gram L, Kuzmenko I, Olsen CA, Gidalevitz D. Guanidino groups greatly enhance the action of antimicrobial peptidomimetics against bacterial cytoplasmic membranes. Biochim Biophys Acta 2014; 1838:2492-2502. [PMID: 24878450 DOI: 10.1016/j.bbamem.2014.05.022] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2013] [Revised: 05/11/2014] [Accepted: 05/19/2014] [Indexed: 11/18/2022]
Abstract
Antimicrobial peptides or their synthetic mimics are a promising class of potential new antibiotics. Herein we assess the effect of the type of cationic side chain (i.e., guanidino vs. amino groups) on the membrane perturbing mechanism of antimicrobial α-peptide-β-peptoid chimeras. Langmuir monolayers composed of 1,2-dipalmitoyl-sn-glycero-3-phosphatidylglycerol (DPPG) were used to model cytoplasmic membranes of both Gram-positive and Gram-negative bacteria, while lipopolysaccharide Kdo2-lipid A monolayers were mimicking the outer membrane of Gram-negative species. We report the results of the measurements using an array of techniques, including high-resolution synchrotron surface X-ray scattering, epifluorescence microscopy, and in vitro antimicrobial activity to study the molecular mechanisms of peptidomimetic interaction with bacterial membranes. We found guanidino group-containing chimeras to exhibit greater disruptive activity on DPPG monolayers than the amino group-containing analogues. However, this effect was not observed for lipopolysaccharide monolayers where the difference was negligible. Furthermore, the addition of the nitrobenzoxadiazole fluorophore did not reduce the insertion activity of these antimicrobials into both model membrane systems examined, which may be useful for future cellular localization studies.
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Affiliation(s)
- Konstantin Andreev
- Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering and Department of Physics, Illinois Institute of Technology, 3440 S. Dearborn St., Chicago, IL 60616 (USA)
| | - Christopher Bianchi
- Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering and Department of Physics, Illinois Institute of Technology, 3440 S. Dearborn St., Chicago, IL 60616 (USA)
| | - Jonas S Laursen
- Department of Chemistry, Technical University of Denmark, Kemitorvet 207, DK-2800 Kgs. Lyngby (Denmark)
| | - Linda Citterio
- Department of Systems Biology, Technical University of Denmark, Matematiktorvet 301, DK-2800 Kgs. Lyngby (Denmark)
| | - Line Hein-Kristensen
- , National Food Institute, Technical University of Denmark, Søltofts Plads 221, DK-2800, Kgs Lyngby (Denmark)
| | - Lone Gram
- Department of Systems Biology, Technical University of Denmark, Matematiktorvet 301, DK-2800 Kgs. Lyngby (Denmark)
| | - Ivan Kuzmenko
- Advanced Photon Source, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, IL 60439 (USA)
| | - Christian A Olsen
- Department of Chemistry, Technical University of Denmark, Kemitorvet 207, DK-2800 Kgs. Lyngby (Denmark)
| | - David Gidalevitz
- Center for Molecular Study of Condensed Soft Matter (μCoSM), Pritzker Institute of Biomedical Science and Engineering and Department of Physics, Illinois Institute of Technology, 3440 S. Dearborn St., Chicago, IL 60616 (USA)
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15
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Nobre TM, Martynowycz M, Kuhl T, Gidalevitz D, Nikaido H. Interaction of Novobiocin with Salmonella Sp Outer Membrane. Biophys J 2014. [DOI: 10.1016/j.bpj.2013.11.3886] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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16
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Martynowycz MW, Morimoto Nobre T, Nikaido H, Gidalevitz D. The Structural Role of Lipid Domain Modifications in Antimicrobial Resistance for Salmonella Enterica Serovar Typhimurium. Biophys J 2014. [DOI: 10.1016/j.bpj.2013.11.603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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17
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Andreev K, Lingaraju M, Ivankin A, Huang M, Kirshenbaum K, Gidalevitz D. Membrane Interactions of Antimicrobial Peptoids - Restriction of Conformational Flexibility as a Strategy to Enhance Activity. Biophys J 2013. [DOI: 10.1016/j.bpj.2012.11.3322] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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18
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Abstract
Biomembranes undergo extensive shape changes as they perform vital cellular functions. The mechanisms by which lipids and proteins control membrane curvature remain unclear. We use x-ray reflectivity, grazing incidence x-ray diffraction, and epifluorescence microscopy to study binding of HIV-1 glycoprotein gp41's membrane-bending domain to DPPC/cholesterol monolayers of various compositions at the air-liquid interface. The results offer a new insight into how membrane curvature could be regulated by cholesterol during fusion of the viral lipid envelope and the host cell membranes.
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Affiliation(s)
- Andrey Ivankin
- Department of Physics and Center for Molecular Study of Condensed Soft Matter (μCoSM), Illinois Institute of Technology, Chicago, Illinois 60616
| | - Ivan Kuzmenko
- Advanced Photon Source, Argonne National Laboratories, Argonne, Illinois 60439
| | - David Gidalevitz
- Department of Physics and Center for Molecular Study of Condensed Soft Matter (μCoSM), Illinois Institute of Technology, Chicago, Illinois 60616
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19
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Ivankin A, Gidalevitz D. Cholesterol Mediates Membrane Curvature during Fusion Events. Biophys J 2012. [DOI: 10.1016/j.bpj.2011.11.1623] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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20
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Ivankin A, Adamczyk PA, Shah BH, Gidalevitz D. Molecular Basis for Anticancer Activity of Host Defense Peptides. Biophys J 2011. [DOI: 10.1016/j.bpj.2010.12.2030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
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21
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Apellaniz B, Ivankin A, Gidalevitz D, Nieva JL. Destabilization of Highly Rigid Bilayers Enriched in Cholesterol by the Membrane-Proximal External Region of HIV-1 gp41. Biophys J 2011. [DOI: 10.1016/j.bpj.2010.12.3646] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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22
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Ivankin A, Livne L, Mor A, Caputo GA, DeGrado WF, Meron M, Lin B, Gidalevitz D. Role of the conformational rigidity in the design of biomimetic antimicrobial compounds. Angew Chem Int Ed Engl 2010; 49:8462-5. [PMID: 20872385 PMCID: PMC4112193 DOI: 10.1002/anie.201003104] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Andrey Ivankin
- Center for Molecular Study of Condensed Soft Matter (μCoSM), and Division of Physics, BCPS Department, Illinois Institute of Technology, 3440 S Dearborn Street, Chicago, IL 60616 (USA)
| | - Liran Livne
- Department of Biotechnology & Food Engineering, Technion-Israel Institute of Technology, Haifa 32000, (Israel)
| | - Amram Mor
- Department of Biotechnology & Food Engineering, Technion-Israel Institute of Technology, Haifa 32000, (Israel)
| | - Gregory A. Caputo
- Department of Chemistry and Biochemistry, Rowan University, 201 Mullica Hill Road, Glassboro, NJ 08028 (USA)
| | - William F. DeGrado
- Department of Biochemistry and Biophysics, University of Pennsylvania, School of Medicine, 36 & Hamilton Walk, Philadelphia, PA 19104-6059 (USA)
| | - Mati Meron
- CARS, University of Chicago Chicago, IL 60637 (USA)
| | - Binhua Lin
- CARS, University of Chicago Chicago, IL 60637 (USA)
| | - David Gidalevitz
- Center for Molecular Study of Condensed Soft Matter (μCoSM), and Division of Physics, BCPS Department, Illinois Institute of Technology, 3440 S Dearborn Street, Chicago, IL 60616 (USA)
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Ivankin A, Livne L, Mor A, Caputo GA, DeGrado WF, Meron M, Lin B, Gidalevitz D. Role of the Conformational Rigidity in the Design of Biomimetic Antimicrobial Compounds. Angew Chem Int Ed Engl 2010. [DOI: 10.1002/ange.201003104] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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24
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Ivankin A, Kuzmenko I, Gidalevitz D. Cholesterol-phospholipid interactions: new insights from surface x-ray scattering data. Phys Rev Lett 2010; 104:108101. [PMID: 20366454 PMCID: PMC2880613 DOI: 10.1103/physrevlett.104.108101] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2009] [Indexed: 05/17/2023]
Abstract
We report a structural study of cholesterol-DPPC (1,2-dipalmitoyl-sn-glycero-3-phophocholine) monolayers using x-ray reflectivity and grazing incidence x-ray diffraction. Reflectivity reveals that the vertical position of cholesterol relative to phospholipids strongly depends on its mole fraction (chi(CHOL)). Moreover, we find that at a broad range of chi(CHOL) cholesterol and DPPC form alloylike mixed domains of short-range order and the same stoichiometry as that of the film. Based on the data presented, we propose a new model of cholesterol-phospholipid organization in mixed monolayers.
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Affiliation(s)
- Andrey Ivankin
- Center for Molecular Study of Condensed Soft Matter (μCoSM), and Division of Physics, BCPS Department, Illinois Institute of Technology, Chicago, Illinois 60616, USA
| | - Ivan Kuzmenko
- Advanced Photon Source, Argonne National Laboratories, Argonne, Illinois 60439, USA
| | - David Gidalevitz
- Center for Molecular Study of Condensed Soft Matter (μCoSM), and Division of Physics, BCPS Department, Illinois Institute of Technology, Chicago, Illinois 60616, USA
- To whom correspondence should be addressed. Center for Molecular Study of Condensed Soft Matter (μCoSM), and Division of Physics, BCPS Department, Illinois Institute of Technology, 3440 S. Dearborn Street, Chicago, IL 60616, USA.
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Sarig H, Livne L, Held-Kuznetsov V, Zaknoon F, Ivankin A, Gidalevitz D, Mor A. A miniature mimic of host defense peptides with systemic antibacterial efficacy. FASEB J 2010; 24:1904-13. [PMID: 20124435 DOI: 10.1096/fj.09-149427] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Oligomers of acylated lysines (OAKs) are synthetic mimics of host defense peptides (HDPs) with promising antimicrobial properties. Here we challenged the OAK concept for its ability to generate both systemically efficient and economically viable lead compounds for fighting multidrug-resistant bacteria. We describe the design and characterization of a miniature OAK composed of only 3 lysyls and 2 acyls (designated C(12(omega7))K-beta(12)) that preferentially targets gram-positive species by a bacteriostatic mode of action. To gain insight into the mechanism of action, we examined the interaction of OAK with various potential targets, including phospholipid bilayers, using surface plasmon resonance, and Langmuir monolayers, using insertion assays, epifluorescence microscopy, and grazing incidence X-ray diffraction, in a complementary manner. Collectively, the data support the notion that C(12(omega7))K-beta(12) damages the plasma-membrane architecture similarly to HDPs, that is, following a near-classic 2-step interaction including high-affinity electrostatic adhesion and a subsequent shallow insertion that was limited to the phospholipid head group region. Notably, preliminary acute toxicity and efficacy studies performed with mouse models of infection have consolidated the potential of OAK for treating bacterial infections, including systemic treatments of methicillin-resistant Staphylococcus aureus. Such simple yet robust chemicals might be useful for various antibacterial applications while circumventing potential adverse effects associated with cytolytic compounds.
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Affiliation(s)
- Hadar Sarig
- Department of Biotechnology and Food Engineering, Technion-Israel Institute of Technology, Haifa, Israel
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26
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Antipova A, Ivankin A, Radzishevsky I, Mor A, Gidalevitz D. Antimicrobial Peptide Mimics as Potential Anticancer Agents:Interactions of Acyl-Lysine Oligomer C12K-7Alpha8 with Ganglioside/DPPC Mixtures. Biophys J 2010. [DOI: 10.1016/j.bpj.2009.12.1515] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
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27
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Neville F, Ivankin A, Konovalov O, Gidalevitz D. A comparative study on the interactions of SMAP-29 with lipid monolayers. Biochim Biophys Acta 2009; 1798:851-60. [PMID: 19800862 DOI: 10.1016/j.bbamem.2009.09.017] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2009] [Revised: 09/08/2009] [Accepted: 09/24/2009] [Indexed: 11/26/2022]
Abstract
This work investigates the discrimination of lipid monolayers by the ovine antimicrobial peptide SMAP-29 and compares it to that of the human LL-37 peptide. Fluid phospholipid monolayers were formed in a Langmuir trough and subsequently studied with the X-ray scattering techniques of X-ray reflectivity and grazing incidence X-ray diffraction. Any changes in the phospholipid structure after injection of peptide under the monolayer were considered to be due to interactions between the peptides and lipids. The data show that SMAP-29 discriminates against negatively charged phospholipids in a similar way to LL-37. However, it is even more interesting to note that despite a higher concentration of SMAP-29 near the monolayer, ensured by its greater charge as compared to LL-37, the amount of SMAP-29 needed to observe monolayer disruption was around three and a half times the number of molecules of LL-37 used to see similar changes with the same system. This result suggests that the structure, amino acid sequence or size of the peptide may well be as important as electrical charge and therefore gives many implications for the further study of antimicrobial peptides with regards to novel drug design and development.
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Affiliation(s)
- Frances Neville
- School of Process, Environmental and Materials Engineering, University of Leeds, Leeds LS29JT, UK
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28
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Ivankin A, Antipova A, Gidalevitz D. Cholesterol-phospholipid Interactions: New Insights From Surface X-ray Scattering Data. Biophys J 2009. [DOI: 10.1016/j.bpj.2008.12.3196] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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29
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Ivankin A, Sarig H, Mor A, Gidalevitz D. Fine-Tuning of Acyl-Lysine Antimicrobial Peptide Mimics. Biophys J 2009. [DOI: 10.1016/j.bpj.2008.12.2350] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
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30
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Hodges CS, Hammond RB, Gidalevitz D. Behavior of thin films of poly(oxyethylene)-poly(oxybutylene) copolymers studied by brewster angle microscopy and atomic force microscopy. Langmuir 2008; 24:13470-13476. [PMID: 18991421 DOI: 10.1021/la802445q] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Surface films of two copolymers of ethylene oxide (E) and butylene oxide (B), namely E23B8 and E87B18, have been examined by Brewster angle microscopy (BAM) and atomic force microscopy (AFM). Isotherms taken on unsupported films of these copolymers at the air-water interface showed a clear gas to liquid phase transition for E57B18 and a barely discernible phase transition for E23B8. The BAM studies showed a gradual brightening of the films as the surface pressure was increased, which was associated with a film thickening and/or a film densification. Several bright spots were also observed within the films, with the number of spots increasing gradually as the film surface pressure was increased. AFM studies of these films did not show any localized ordering, which fits in with the results from our previous X-ray study of these copolymers [Hodges, C. S.; Neville, F.; Konovalov, O.; Gidalevitz, D.; Hamley, I. W.; Langmuir 2006, 22 (21), 8821-8825], where no long-range ordering was observed. AFM imaging showed two sizes of particulates that were irregularly spaced across the film. The larger particulates were associated with silica contaminants from the copolymer synthesis, whereas the smaller particulates were assumed to be aggregated copolymer. An analysis of the semidilute region of the isotherm showed that while both copolymers had intermixed ethylene oxide and butylene oxide units, the lower molecular weight E23B8 copolymer manifested significantly more intermixing than E87B18.
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Affiliation(s)
- Chris S Hodges
- Institute of Materials Research, and Institute of Particle Science and Engineering, University of Leeds, Leeds LS2 9JT, United Kingdom.
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31
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Neville F, Ishitsuka Y, Hodges CS, Konovalov O, Waring AJ, Lehrer R, Lee KYC, Gidalevitz D. Protegrin interaction with lipid monolayers: Grazing incidence X-ray diffraction and X-ray reflectivity study. Soft Matter 2008; 4:1665-1674. [PMID: 19672319 PMCID: PMC2723866 DOI: 10.1039/b718295c] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Interactions of the antimicrobial peptide protegrin-1 (PG-1) with phospholipid monolayers have been investigated by using grazing incidence X-ray diffraction (GIXD) and specular X-ray reflectivity (XR). The structure of a PG-1 film at the air-aqueous interface was also investigated by XR for the first time. Lipid A, dipalmitoyl-phosphatidylglycerol (DPPG) and dipalmitoyl-phosphatidylcholine (DPPC) monolayers were formed at the air-aqueous interface to mimic the surface of the bacterial cell wall and the outer leaflet of the erythrocyte cell membrane, respectively. Experiments were carried out under constant area conditions where the pressure changes upon insertion of peptide into the monolayer. GIXD data suggest that the greatest monolayer disruption produced by PG-1 is seen with the DPPG system at 20 mN/m since the Bragg peaks completely disappear after introduction of PG-1 to the system. PG-1 shows greater insertion into the lipid A system compared to the DPPC system when both films are held at the same initial surface pressure of 20 mN/m. The degree of insertion lessens at 30 mN/m with both DPPC and DPPG monolayer systems. XR data further reveal that PG-1 inserts primarily in the head group region of lipid monolayers. However, only the XR data of the anionic lipids suggest the existence of an additional adsorbed peptide layer below the head group of the monolayer. Overall the data show that the extent of peptide/lipid interaction and lipid monolayer disruption depends not only on the lipid composition of the monolayer, but the packing density of the lipids in the monolayer prior to the introduction of peptide to the subphase.
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Affiliation(s)
- Frances Neville
- Address, School of Process, Environmental and Materials Engineering, University of Leeds, Leeds, LS2 9JT, UK
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32
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Hodges CS, Neville F, Konovalov O, Hammond RB, Gidalevitz D, Hamley IW. Structural analysis of PEO-PBO copolymer monolayers at the air-water interface. Langmuir 2006; 22:8821-5. [PMID: 17014123 DOI: 10.1021/la060632k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
X-ray reflectivity (XR) and grazing incidence X-ray diffraction (GIXD) have been used to examine an oxyethylene-b-oxybutylene (E(23)B(8)) copolymer film at the air-water interface. The XR data were fitted using both a one- and a two-layer model that outputted the film thickness, roughness, and electron density. The best fit to the experimental data was obtained using a two-layer model (representing the oxyethylene and oxybutylene blocks, respectively), which showed a rapid thickening of the copolymer film at pressures above 7 mN/m. The large roughness values found indicate a significant degree of intermixing between the blocks and back up the GIXD data, which showed no long range lateral ordering within the layer. It was found from the electron density model results that there is a large film densification at 7 mN/m, possibly suggesting conformational changes within the film, even though no such change occurs on the pressure-area isotherm at the same surface pressure.
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Affiliation(s)
- Chris S Hodges
- Institute for Materials Research, University of Leeds, Leeds, LS2 9JT, UK.
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Neville F, Gidalevitz D, Kale G, Nelson A. Electrochemical screening of anti-microbial peptide LL-37 interaction with phospholipids. Bioelectrochemistry 2006; 70:205-13. [PMID: 16949887 DOI: 10.1016/j.bioelechem.2006.07.006] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2006] [Revised: 05/18/2006] [Accepted: 07/07/2006] [Indexed: 11/25/2022]
Abstract
LL-37 is an alpha-helical antimicrobial peptide of human origin. It is a 37 residue cathelicidin peptide. This paper explores the use of electrochemical methods to investigate the interaction of LL-37 with phospholipid and lipid A monolayers on a mercury drop electrode. Experiments were carried out in Dulbecco's phosphate buffered saline at pH approximately 7.6. The capacity-potential curves of the coated electrode in the presence and absence of LL-37 were measured using out-of-phase ac voltammetry. The frequency dependence of the complex impedance of the coated electrode in the presence and absence of LL-37 was estimated at -0.4 V versus Ag/AgCl 3.5 mol dm(-3) KCl. The monolayer permeability to ions was studied by following the reduction of Tl(I) to Tl(Hg) at the coated electrode. LL-37 shows no significant interaction with DOPC. However, LL-37 shows a small interaction with DOPG and lipid A within a DOPC monolayer where the monolayer permeability is marginally increased and the zero frequency capacitance (ZFC) is marginally decreased in both cases. LL-37 shows a significant interaction with a lipid A monolayer thereby decreasing the ZFC by 30%. The results concur with the known membrane active properties of LL-37 and establish this electrochemical approach as a key technique for screening peptides.
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Affiliation(s)
- Frances Neville
- Institute for Materials Research, School of Process, Environmental and Materials Engineering, University of Leeds, LS2 9JT, UK
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Neville F, Hodges CS, Liu C, Konovalov O, Gidalevitz D. In situ characterization of lipid A interaction with antimicrobial peptides using surface X-ray scattering. Biochim Biophys Acta 2006; 1758:232-40. [PMID: 16584708 DOI: 10.1016/j.bbamem.2006.01.025] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2005] [Revised: 01/29/2006] [Accepted: 01/31/2006] [Indexed: 11/23/2022]
Abstract
Lipid A structure at the air-aqueous interface has been studied using pressure-area isotherm methods coupled with the surface X-ray scattering techniques of X-ray reflectivity (XR) and grazing incidence X-ray diffraction (GIXD). Lipid A monolayers were formed at the air-aqueous interface to represent the lipid moiety of the outer membrane of Gram-negative bacteria. Lipid A structure was characterized at surface pressures between 10 and 35 mN/m. Interactions of alpha-helical antimicrobial peptides LL-37, SMAP-29 and D2A22 with lipid A monolayers were subsequently studied. Although insertion into the lipid A monolayers was observed with the alpha-helical peptides, little change was seen from the X-ray data, suggesting that the lipid A hydrocarbon chains are involved in reorientation during insertion and that the hydrocarbon chains have a relatively rigid structure.
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Affiliation(s)
- Frances Neville
- School of Process, Environmental and Materials Engineering, University of Leeds, Leeds LS2 9JT, UK
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35
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Neville F, Cahuzac M, Konovalov O, Ishitsuka Y, Lee KYC, Kuzmenko I, Kale GM, Gidalevitz D. Lipid headgroup discrimination by antimicrobial peptide LL-37: insight into mechanism of action. Biophys J 2006; 90:1275-87. [PMID: 16299073 PMCID: PMC1367279 DOI: 10.1529/biophysj.105.067595] [Citation(s) in RCA: 129] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2005] [Accepted: 09/29/2005] [Indexed: 11/18/2022] Open
Abstract
Interaction of the human antimicrobial peptide LL-37 with lipid monolayers has been investigated by a range of complementary techniques including pressure-area isotherms, insertion assay, epifluorescence microscopy, and synchrotron x-ray scattering, to analyze its mechanism of action. Lipid monolayers were formed at the air-liquid interface to mimic the surface of the bacterial cell wall and the outer leaflet of erythrocyte cell membrane by using phosphatidylglycerol (DPPG), phosphatidylcholine (DPPC), and phosphatidylethanolamine (DPPE) lipids. LL-37 is found to readily insert into DPPG monolayers, disrupting their structure and thus indicating bactericidal action. In contrast, DPPC and DPPE monolayers remained virtually unaffected by LL-37, demonstrating its nonhemolytic activity and lipid discrimination. Specular x-ray reflectivity data yielded considerable differences in layer thickness and electron-density profile after addition of the peptide to DPPG monolayers, but little change was seen after peptide injection when probing monolayers composed of DPPC and DPPE. Grazing incidence x-ray diffraction demonstrated significant peptide insertion and lateral packing order disruption of the DPPG monolayer by LL-37 insertion. Epifluorescence microscopy data support these findings.
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Affiliation(s)
- Frances Neville
- Institute for Materials Research, University of Leeds, Leeds, United Kingdom
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36
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Whitehouse C, Gidalevitz D, Cahuzac M, Koeppe Ii RE, Nelson A. Interaction of gramicidin derivatives with phospholipid monolayers. Langmuir 2004; 20:9291-9298. [PMID: 15461520 DOI: 10.1021/la048797l] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A study of the interaction of gramicidin A (gA), tert-butyloxycarbonyl-gramicidin (g-BOC), and desformyl gramicidin (g-des) with dioleoyl phosphatidylcholine (DOPC) and DOPC/phosphatidylserine (PS) mixed monolayers on a mercury electrode is reported in this paper. Experiments were carried out in electrolytes KCl (0.1 mol dm(-3)) and Mg(NO3)2 (0.05 mol dm(-3)). The channel-forming properties of the gramicidins were studied by following the reduction of Tl(I) to Tl(Hg). The frequency dependence of the complex impedance of coated electrode surfaces in the presence and absence of the gramicidins was estimated between 65,000 and 0.1 Hz at potentials of -0.4 V versus Ag/AgCl with 3.5 mol dm(-3) KCl. Epifluorescence microscopy was used to qualitatively correlate the interaction of the gramicidin peptides with dipalmitoyl phosphatidylcholine (DPPC) and dipalmitoyl phosphatidylglycerol (DPPG) at the air-water interface. gA was shown to form Tl+ conducting channels in a DOPC monolayer, while g-BOC and g-des did not. In DOPC-30% PS (DOPC-0.3PS) layers, there is a marked increase in channel activity of all three gramicidin derivatives. None of the peptides facilitate the permeability of the DOPC-0.3PS layer to Cd2+. All three peptides interact with the layer as shown by capacitance-potential curves and impedance spectroscopy indicated by penetration of the peptide into the dielectric, an increase in surface "roughness", and an increased significance of low-frequency relaxations. The order of interaction is gA > g-des > g-BOC. The epifluorescence study of DPPC and DPPG layers at the air-water interface shows a selective action of the different gramicidins.
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Affiliation(s)
- C Whitehouse
- Center for Self-Organising Molecular Systems, School of Chemistry, University of Leeds, LS2 9JT, United Kingdom
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Gidalevitz D, Ishitsuka Y, Muresan AS, Konovalov O, Waring AJ, Lehrer RI, Lee KYC. Interaction of antimicrobial peptide protegrin with biomembranes. Proc Natl Acad Sci U S A 2003; 100:6302-7. [PMID: 12738879 PMCID: PMC164441 DOI: 10.1073/pnas.0934731100] [Citation(s) in RCA: 180] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2002] [Indexed: 11/18/2022] Open
Abstract
The antimicrobial peptide protegrin-1 (PG-1) interacts with membranes in a manner that strongly depends on membrane lipid composition. In this research we use an approach representing the outer layers of bacterial and red blood cell membranes with lipid monolayers and using a combination of insertion assay, epifluorescence microscopy, and surface x-ray scattering to gain a better understanding of antimicrobial peptide's mechanism of action. We find that PG-1 inserts readily into anionic dipalmitoyl-phosphatidylglycerol, palmitoyl-oleoyl-phosphatidylglycerol, and lipid A films, but significantly less so into zwitterionic dipalmitoyl-phosphatidylcholine, palmitoyl-oleoyl-phosphatidylcholine, and dipalmitoyl-phosphatidylethanolamine monolayers under similar experimental conditions. Epifluorescence microscopy shows that the insertion of PG-1 into the lipid layer results in the disordering of lipid packing; this disordering effect is corroborated by grazing incidence x-ray diffraction data. X-ray reflectivity measurements further point to the location of the peptide in the lipid matrix. In a pathologically relevant example we show that PG-1 completely destabilizes monolayer composed of lipid A, the major component in the outer membrane of Gram-negative bacteria, which is likely to be the mechanism by which PG-1 disrupts the outer membrane, thus allowing it to reach the target inner membrane.
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Affiliation(s)
- David Gidalevitz
- Department of Chemical Engineering, University of Leeds, United Kingdom
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Gidalevitz D, Weissbuch I, Kjaer K, Als-Nielsen J, Leiserowitz L. Design of Two-Dimensional Crystals as Models for Probing the Structure of the Solid-Liquid Interface. J Am Chem Soc 2002. [DOI: 10.1021/ja00087a012] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Yang B, Gidalevitz D, Li D, Huang Z, Rice SA. Two-dimensional freezing in the liquid-vapor interface of a dilute Pb:Ga alloy. Proc Natl Acad Sci U S A 1999; 96:13009-11. [PMID: 10557263 PMCID: PMC23890 DOI: 10.1073/pnas.96.23.13009] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
We report the results of x-ray reflectivity and grazing incidence x-ray diffraction studies of the liquid-vapor interface of a dilute alloy of Pb in Ga over the temperature range of 23-76 degrees C. Our data show that the liquid-vapor interface of this alloy is stratified for several atomic diameters into the bulk liquid and that a monolayer of Pb forms the outermost stratum of the interface. Over the temperature range of 23-56 degrees C, the monolayer of Pb is in an ordered hexagonal phase. At about 58 degrees C, this monolayer undergoes a first-order transition to a hexatic phase, which remains stable to 76 degrees C. An analogy between the observed transition and the first-order melting transition in a one-component classical plasma is suggested.
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Affiliation(s)
- B Yang
- Department of Chemistry and The James Franck Institute, University of Chicago, Chicago, IL 60637, USA
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Gidalevitz D, Huang Z, Rice SA. Urease and hexadecylamine-urease films at the air-water interface: an x-ray reflection and grazing incidence x-ray diffraction study. Biophys J 1999; 76:2797-802. [PMID: 10233095 PMCID: PMC1300250 DOI: 10.1016/s0006-3495(99)77433-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
Abstract
We report the results of surface x-ray scattering measurements performed on urease and hexadecylamine-urease films at the air-aqueous solution interface. It is demonstrated that although hexadecylamine does not form a stable monolayer on the pure aqueous surface, it does self-assemble into a stable, well-organized structure when spread on top of a urease film at the air-water interface. It is also likely that protein and hexadecylamine domains coexist at the interface.
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Affiliation(s)
- D Gidalevitz
- The James Franck Institute, The University of Chicago, Chicago, Illinois 60637, USA
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Abstract
We report the results of x-ray reflectivity measurements of thin films formed by different water-soluble proteins at the air-aqueous solution interface. It is demonstrated that glucose oxidase, alcohol dehydrogenase, and urease molecules denaturate at the air-aqueous solution interface to form 8- to 14-A-thick peptide sheets. X-ray reflectivity data indicate that the spreading of a lipid monolayer at the aqueous solution surface before protein injection does not prevent proteins from unfolding. On the other hand, crosslinking of proteins results in intact enzyme layers at the subphase surface. A model that involves interaction of glucose oxidase molecules with a phospholipid monolayer is proposed. In this model, an observed decrease of the lipid electron density in the protein presence is explained in terms of "holes" in the monolayer film caused by protein molecule adsorption.
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Affiliation(s)
- D Gidalevitz
- The James Franck Institute, The University of Chicago, Chicago, IL 60637, USA
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Gidalevitz D, Mindyuk OY, Stetzer MR, Heiney PA, Kurnaz ML, Schwartz DK, Ocko BM, McCauley JP, Smith AB. A Conformational Phase Transition in a Langmuir Film of an Amphiphilic Azacrown. J Phys Chem B 1998. [DOI: 10.1021/jp982412o] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | | | | | | | | | | | - Benjamin M. Ocko
- Physics Department, Brookhaven National Laboratory, Upton, New York 11973
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Heiney PA, Gidalevitz D, Maliszewskyj NC, Satija S, Vaknin D, Pan Y, Ford WT. Multilayer formation in an azacrown [18]N6 Langmuir film. Chem Commun (Camb) 1998. [DOI: 10.1039/a800388b] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Gidalevitz D, Mindyuk OY, Heiney PA, Ocko BM, Henderson P, Ringsdorf H, Boden N, Bushby RJ, Martin PS, Strzalka J, McCauley JP, Smith AB. Structure of Discotic Liquid Crystalline Compounds at the Air−Water Interface. J Phys Chem B 1997. [DOI: 10.1021/jp972678f] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
| | | | | | - Benjamin M. Ocko
- Physics Department, Brookhaven National Laboratory, Upton, New York 11973
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Gidalevitz D, Feidenhans'l R, Leiserowitz L. Surface X-ray Scattering Study of Stereospecific Adsorption of Additives onto the Surface of a Molecular Crystal Grown from Solution. ACTA ACUST UNITED AC 1997. [DOI: 10.1002/anie.199709591] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Gidalevitz D, Feidenhans'l R, Matlis S, Smilgies DM, Christensen MJ, Leiserowitz L. Monitoring In Situ Growth and Dissolution of Molecular Crystals: Towards Determination of the Growth Units. ACTA ACUST UNITED AC 1997. [DOI: 10.1002/anie.199709551] [Citation(s) in RCA: 75] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Gidalevitz D, Feidenhans'l, R, Matlis S, Smilgies DM, Christensen MJ, Leiserowitz L. Die In-situ-Beobachtung des Wachsens und Lösens organischer Kristalle: ein erster Schritt zur Bestimmung der Aufbauelemente. Angew Chem Int Ed Engl 1997. [DOI: 10.1002/ange.19971090909] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Gidalevitz D, Feidenhans'l R, Leiserowitz L. Röntgenographische Untersuchung der stereospezifischen Adsorption von Additiven beim Aufwachsen aus Lösung auf die Oberfläche von Molekülkristallen. Angew Chem Int Ed Engl 1997. [DOI: 10.1002/ange.19971090910] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Gidalevitz D, Feidenhans'l R, Leiserowitz L. Determination of the crystal growth units by grazing incidence X-ray diffraction (GIXD) and AFM. Acta Crystallogr A 1996. [DOI: 10.1107/s0108767396079019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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