Virome release of an invasive exotic plant species in southern France

The increase in human-mediated introduction of plant species to new regions has resulted in a rise of invasive exotic plant species (IEPS) that has had significant effects on biodiversity and ecosystem processes. One commonly accepted mechanism of invasions is that proposed by the enemy release hypothesis (ERH), which states that IEPS free from their native herbivores and natural enemies in new environments can outcompete indigenous species and become invasive. We here propose the virome release hypothesis (VRH) as a virus-centered variant of the conventional ERH that is only focused on enemies. The VRH predicts that vertically transmitted plant-associated viruses (PAV, encompassing phytoviruses and mycoviruses) should be co-introduced during the dissemination of the IEPS, while horizontally transmitted PAV of IEPS should be left behind or should not be locally transmitted in the introduced area due to a maladaptation of local vectors. To document the VRH, virome richness and composition as well as PAV prevalence, co-infection, host range, and transmission modes were compared between indigenous plant species and an invasive grass, cane bluestem (Bothriochloa barbinodis), in both its introduced range (southern France) and one area of its native range (Sonoran Desert, Arizona, USA). Contrary to the VRH, we show that invasive populations of B. barbinodis in France were not associated with a lower PAV prevalence or richness than native populations of B. barbinodis from the USA. However, comparison of virome compositions and network analyses further revealed more diverse and complex plant-virus interactions in the French ecosystem, with a significant richness of mycoviruses. Setting mycoviruses apart, only one putatively vertically transmitted phytovirus (belonging to the Amalgaviridae family) and one putatively horizontally transmitted phytovirus (belonging to the Geminiviridae family) were identified from B. barbinodis plants in the introduced area. Collectively, these characteristics of the B. barbinodis-associated PAV community in southern France suggest that a virome release phase may have immediately followed the introduction of B. barbinodis to France in the 1960s or 1970s, and that, since then, the invasive populations of this IEPS have already transitioned out of this virome release phase, and have started interacting with several local mycoviruses and a few local plant viruses.

Above- and below-ground effects of an ecosystem engineer ant in Mediterranean dry grasslands

Within a local assemblage, ecosystem engineers can have major impacts on population dynamics, community composition and ecosystem functions by transforming or creating new habitats. They act as an ecological filter altering community composition through a set of environmental variables. The impact of ants on their environment has been widely studied, but their multi-component effects (both trophic and non-trophic) have been rarely addressed. We investigated the roles of Messor barbarus, one of the commonest harvester ant species in south-western European Mediterranean grasslands. We analysed soil physico-chemical parameters, above-ground vegetation (e.g. species richness, plant community, micro-local heterogeneity, plant biomass) and above- and below-ground fauna (macrofauna, Collembola, Acari and nematodes). A clear and strong local impact of M. barbarus on soil, vegetation and fauna compartments emerges. The environmental filter is altered by modifications to soil physico-chemical properties, and the biotic filter by changes to plant communities and altered above- and below-ground fauna abundance, occurrence and community structure. The engineering activity of M. barbarus affects not only these separate ecosystem components but also the trophic and non-trophic relationships between them. By altering ecological filters at a local scale, M. barbarus creates habitat heterogeneity that may in turn increase ecological niches in these highly diverse ecosystems.

High Stocking Density Controls Phillyrea Angustifolia in Mediterranean Grasslands

Extensive grazing applied in the form of low instantaneous pressure over a long period is a widespread management practice in protected areas. However this kind of stocking method does not always achieve the expected results, in particular because it fails to limit colonization by woody plants.This is the case in the relict xero-halophytic grasslands of the northern Mediterranean coastal region, subjected to widespread colonization by the shrub Phillyrea angustifolia despite the presence of extensive grazing. In this study, we investigated, for an equal annual stocking rate, the respective impact of high stocking density applied over a short period (mob grazing) and low stocking density applied over a long period on both P. angustifolia and herbaceous cover, using an in situ experimental design run for 7 years. Only mob grazing was effective both in controlling the establishment and increasing the mortality of P. angustifolia individuals. We did not find any difference after the 7 years of experimentation between the two stocking methods with regard to the herbaceous community parameters tested: species richness, diversity, evenness, contribution of annual characteristic species. By contrast, the exclusion of domestic grazing led to a strong reduction of these values.The use of mob grazing may be well suited for meeting conservation goals such as maintaining open habitats in these grasslands.

Using Different Grazing Practices for Increasing Plant Biodiversity in the Dykes and Embankments Along the Rhône River (Southern France)

Extensive grazing by domestic herbivores is a widespread management practice used since the 80s in many European agro-ecosystems such as semi-natural grasslands to maintain open habitats and to enhance biodiversity. Such grazing systems have principally been tested in cultural ecosystems of high nature value threatened by grazing abandonment. However, there have been few case studies of grazing management in very anthropized ecosystems, such as the new ecosystems created by urban or industrial conversions. In Southern France, the Rhône channeling for navigation and electricity production generated in the 1950s the construction of thousands of hectares of dams and dykes which were colonized naturally by diverse plant communities. Yet shrub encroachment and the consequent recourse to mechanical cutting to facilitate control and maintenance, raise the question of how best to maintain and manage these new habitats. Consequently, since 1999, different low-intensity grazing management systems using rustic breeds of cattle, horses and goats have been tested on a protected reserve of 1454 ha located in the lower part of the Rhône river. Extensive grazing, more than cutting or no management, positively modified vegetation heterogeneity (beta-diversity), the target open grassland species, but not plant species richness (alpha-diversity). However, the current monitoring shows that these benefits of grazing will be confirmed only if low-intensity grazing systems are sustained and if new adaptations can be also made, such as the use of mixed stocking and the establishment of multiyear contracts with breeders.

Impact of the insecticide Alphacypermetrine and herbicide Oxadiazon, used singly or in combination, on the most abundant frog in French rice fields, Pelophylax perezi

The potential impact of agricultural pesticides is a major concern with regard to biodiversity conservation. Pesticides are considered as one of the main causes of the worldwide decline of Amphibians. They are rarely used singly, but their cumulative impact and interaction are often neglected, as is the importance of the age or stage of the animal on which the impact of the molecules is assessed. We therefore tested the potential cumulative impact of the only authorized insecticide (Alphacypermetrine) and the main herbicide (Oxadiazon) used in French rice fields on four replicates of 25 eggs, young larvae and prometamorphosis tadpoles of the most abundant frog in paddies (Pelophylax perezi). We found no significant effect of the insecticide and herbicide, used singly or in combination, on hatching and young tadpoles. However, we found a strong impact of insecticide and herbicide used singly and a highly deleterious impact of their combined use on prometamorphosis tadpoles. Among the four replicates, only one of the prometamorphosis tadpoles did not reach this adult stage in the control against 9, 9, 6, 4 and 13, 9, 8, 7 with the herbicide and insecticide, respectively. But when the two pesticides were used in combination, only two prometamorphosis tapdoles reached the adult stage. Our results emphasize the potential impact on amphibians of pesticides used in agriculture and highlight the necessity of testing their role as cocktails. They also stress the importance of the age and/or stage of the target organism, the choice of which can lead to contrasting conclusions. Finally, our results suggest a possible underestimation of the impact of pesticides on non-targeted fauna in the rice fields in particular, and on living organisms in general.

Using Shrub Clearing, Draining, and Herbivory to Control Bramble Invasion in Mediterranean Dry Grasslands

For centuries, the dry grassland of the plain of La Crau (south-eastern France) has been subjected to numerous disturbances resulting in the destruction and the fragmentation of this emblematic rangeland ecosystem of the Mediterranean. Today, this ecosystem is facing a new threat from a proliferating native species, the bramble (Rubus ulmifolius Schott), which preferentially colonizes areas that were formerly cultivated and/or exposed to water infiltration. To identify a strategy for effective control of this colonization, in situ experiments testing disturbance regimes (shrub clearing and/or mixed grazing by sheep and goats) combined with the control of access to water resources (with or without drainage trenches) were undertaken between 2010 and 2013. Only clearing and grazing combined over 3 years led to significant changes in vegetation height and bramble cover as well as modifications in the floristic composition, diversity, similarity, and richness of the plant community. Neither a clearing operation carried out in 2010 alone, nor grazing alone, reduced bramble cover, and neither treatment increased the species richness of the plant community. Similarly, digging drainage trenches had no significant impact either on the plant community or on bramble cover. Our study suggests that only annual mechanical clearing coupled with sheep and goats grazing can significantly reduce bramble cover. This combined restoration treatment needs to be applied for at least 3 consecutive years to induce significant changes and enable this ecosystem to return to the dry grassland succession.

Competition Is a Strong Driving Factor in Wetlands, Peaking during Drying Out Periods

The aim of the study is to investigate the relative importance of plant-plant interactions with regard to flooding and drought effect on perennial plant performances in wetlands. Flooding is expected to be the major driver and, accordingly, the importance of drought is hardly if ever taken into account. Focusing on five widespread species, the growth, the survival and the competitive ability of plants were monitored on permanent plots spread along two elevation gradients. Flooding duration and drought intensity were found to vary substantially along the ~ 0.5 meter range elevation gradient. Flooding and drought alternate over the hydrological year and the pin-point surveys were thus conducted over the course of one year. The data were modeled taking into account survival, recruitment and competitive growth throughout flooding and drying out periods. Flooding and drought both directly impacted the plant performances and their competitive effect, with the effect of drought being much more general among species and of higher magnitude than flooding. The importance of competition was found to be high for all species, particularly during the drying out period. It varied more along the flooding gradient than along the drought gradient. The higher flooding tolerance shown by the studied species compared to drought may be related to species specific growth timing together with efficient response traits. These results offer new insights into the filters operating over the species pools. This suggests that the drying out period and drought conditions may be even more important for species' relative success and the importance of competition than the flooding pattern. The general applicability of this result, obtained in mild Atlantic climate and fertile wetlands, remains to be studied.

Uselessness and indirect negative effects of an insecticide on rice field invertebrates

Macro-invertebrate assemblages on organic and conventional rice fields were quantitatively compared in the Camargue (Rhone delta, France). There was no major difference in family richness, but significant differences as regard to abundance. Fipronil, the insecticide used to control chironomid larvae, was one of the main factors explaining those differences. Its negative impact on predatory invertebrates appears to explain the paradoxical lack of difference in chironomid abundance between organic and conventional fields, observed during the study. Macro-invertebrate biomass estimation showed that, for some birds such as herons, conventional rice fields offered a lower value as foraging habitats than organic ones.