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Dubey S, Ager-Wick E, Kumar J, Karunasagar I, Karunasagar I, Peng B, Evensen Ø, Sørum H, Munang’andu HM. Aeromonas species isolated from aquatic organisms, insects, chicken, and humans in India show similar antimicrobial resistance profiles. Front Microbiol 2022; 13:1008870. [PMID: 36532495 PMCID: PMC9752027 DOI: 10.3389/fmicb.2022.1008870] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Accepted: 10/14/2022] [Indexed: 01/07/2024] Open
Abstract
Aeromonas species are Gram-negative bacteria that infect various living organisms and are ubiquitously found in different aquatic environments. In this study, we used whole genome sequencing (WGS) to identify and compare the antimicrobial resistance (AMR) genes, integrons, transposases and plasmids found in Aeromonas hydrophila, Aeromonas caviae and Aeromonas veronii isolated from Indian major carp (Catla catla), Indian carp (Labeo rohita), catfish (Clarias batrachus) and Nile tilapia (Oreochromis niloticus) sampled in India. To gain a wider comparison, we included 11 whole genome sequences of Aeromonas spp. from different host species in India deposited in the National Center for Biotechnology Information (NCBI). Our findings show that all 15 Aeromonas sequences examined had multiple AMR genes of which the Ambler classes B, C and D β-lactamase genes were the most dominant. The high similarity of AMR genes in the Aeromonas sequences obtained from different host species point to interspecies transmission of AMR genes. Our findings also show that all Aeromonas sequences examined encoded several multidrug efflux-pump proteins. As for genes linked to mobile genetic elements (MBE), only the class I integrase was detected from two fish isolates, while all transposases detected belonged to the insertion sequence (IS) family. Only seven of the 15 Aeromonas sequences examined had plasmids and none of the plasmids encoded AMR genes. In summary, our findings show that Aeromonas spp. isolated from different host species in India carry multiple AMR genes. Thus, we advocate that the control of AMR caused by Aeromonas spp. in India should be based on a One Health approach.
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Affiliation(s)
- Saurabh Dubey
- Section of Experimental Biomedicine, Department of Production Animal Clinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, Ås, Norway
| | - Eirill Ager-Wick
- Section of Experimental Biomedicine, Department of Production Animal Clinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, Ås, Norway
| | - Jitendra Kumar
- College of Fisheries, Acharya Narendra Deva University of Agriculture and Technology, Uttar Pradesh, India
| | - Indrani Karunasagar
- Nitte University Centre for Science Education and Research, Mangaluru, India
| | - Iddya Karunasagar
- Nitte University Centre for Science Education and Research, Mangaluru, India
| | - Bo Peng
- State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Pharmaceutical Functional Genes, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Higher Education Mega Center, Guangzhou, China
| | - Øystein Evensen
- Department of Paraclinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, Ås, Norway
| | - Henning Sørum
- Department of Paraclinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, Ås, Norway
| | - Hetron M. Munang’andu
- Section of Experimental Biomedicine, Department of Production Animal Clinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, Ås, Norway
- Faculty of Biosciences and Aquaculture, Nord University, Bodø, Norway
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Dubey S, Diep DB, Evensen Ø, Munang’andu HM. Garvicin KS, a Broad-Spectrum Bacteriocin Protects Zebrafish Larvae against Lactococcus garvieae Infection. Int J Mol Sci 2022; 23:ijms23052833. [PMID: 35269976 PMCID: PMC8910950 DOI: 10.3390/ijms23052833] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2022] [Revised: 02/28/2022] [Accepted: 03/01/2022] [Indexed: 12/19/2022] Open
Abstract
Bacteriocins are emerging as a viable alternative to antibiotics due to their ability to inhibit growth or kill antibiotic resistant pathogens. Herein, we evaluated the ability of the bacteriocin Garvicin KS (GarKS) produced by Lactococcus garvieae KS1546 isolated from cow milk to inhibit the growth of fish and foodborne bacterial pathogens. We found that GarKS inhibited the growth of five fish L. garvieae strains isolated from infected trout and eels. Among fish pathogens, GarKS inhibited the growth of Streptococcus agalactiae serotypes Ia and Ib, and Aeromonas hydrophila but did not inhibit the growth of Edwardsiella tarda. In addition, it inhibited the growth of A. salmonicida strain 6421 but not A. salmonicida strain 6422 and Yersinia ruckeri. There was no inhibition of three foodborne bacterial species, namely Salmonella enterica, Klebsiella pneumoniae, and Escherichia coli. In vitro cytotoxicity tests using different GarKS concentrations showed that the highest concentration of 33 µg/mL exhibited low cytotoxicity, while concentrations ≤3.3 µg/mL had no cytotoxicity on CHSE-214 and RTG-2 cells. In vivo tests showed that zebrafish larvae treated with 33 µg/mL and 3.3 µg/mL GarKS prior to challenge had 53% and 48% survival, respectively, while concentrations ≤0.33 µg/mL were nonprotective. Altogether, these data show that GarKS has a broad inhibitory spectrum against Gram positive and negative bacteria and that it has potential applications as a therapeutic agent for a wide range of bacterial pathogens. Thus, future studies should include clinical trials to test the efficacy of GarKS against various bacterial pathogens in farmed fish.
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Affiliation(s)
- Saurabh Dubey
- Department of Paraclinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, P.O. Box 5003, 1433 Ås, Norway; (S.D.); (Ø.E.)
- Department of Production Medicine, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, P.O. Box 5003, 1433 Ås, Norway
| | - Dzung B. Diep
- Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1433 Ås, Norway;
| | - Øystein Evensen
- Department of Paraclinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, P.O. Box 5003, 1433 Ås, Norway; (S.D.); (Ø.E.)
| | - Hetron M. Munang’andu
- Department of Paraclinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, P.O. Box 5003, 1433 Ås, Norway; (S.D.); (Ø.E.)
- Department of Production Medicine, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, P.O. Box 5003, 1433 Ås, Norway
- Faculty of Biosciences and Aquaculture, Nord University, 8049 Bodø, Norway
- Correspondence: ; Tel.: +47-98-86-86-83
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Mugimba KK, Byarugaba DK, Mutoloki S, Evensen Ø, Munang’andu HM. Challenges and Solutions to Viral Diseases of Finfish in Marine Aquaculture. Pathogens 2021; 10:pathogens10060673. [PMID: 34070735 PMCID: PMC8227678 DOI: 10.3390/pathogens10060673] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2021] [Revised: 05/26/2021] [Accepted: 05/26/2021] [Indexed: 11/16/2022] Open
Abstract
Aquaculture is the fastest food-producing sector in the world, accounting for one-third of global food production. As is the case with all intensive farming systems, increase in infectious diseases has adversely impacted the growth of marine fish farming worldwide. Viral diseases cause high economic losses in marine aquaculture. We provide an overview of the major challenges limiting the control and prevention of viral diseases in marine fish farming, as well as highlight potential solutions. The major challenges include increase in the number of emerging viral diseases, wild reservoirs, migratory species, anthropogenic activities, limitations in diagnostic tools and expertise, transportation of virus contaminated ballast water, and international trade. The proposed solutions to these problems include developing biosecurity policies at global and national levels, implementation of biosecurity measures, vaccine development, use of antiviral drugs and probiotics to combat viral infections, selective breeding of disease-resistant fish, use of improved diagnostic tools, disease surveillance, as well as promoting the use of good husbandry and management practices. A multifaceted approach combining several control strategies would provide more effective long-lasting solutions to reduction in viral infections in marine aquaculture than using a single disease control approach like vaccination alone.
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Affiliation(s)
- Kizito K. Mugimba
- Department of Biotechnical and Diagnostic Sciences, College of Veterinary Medicine Animal Resources and Biosecurity, Makerere University, Kampala P.O. Box 7062, Uganda;
- Correspondence: (K.K.M.); (H.M.M.); Tel.: +256-772-56-7940 (K.K.M.); +47-98-86-86-83 (H.M.M.)
| | - Denis K. Byarugaba
- Department of Biotechnical and Diagnostic Sciences, College of Veterinary Medicine Animal Resources and Biosecurity, Makerere University, Kampala P.O. Box 7062, Uganda;
| | - Stephen Mutoloki
- Department of Paraclinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, P.O. Box 369, 0102 Oslo, Norway; (S.M.); (Ø.E.)
| | - Øystein Evensen
- Department of Paraclinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, P.O. Box 369, 0102 Oslo, Norway; (S.M.); (Ø.E.)
| | - Hetron M. Munang’andu
- Department of Production Animal Clinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, P.O. Box 369, 0102 Oslo, Norway
- Correspondence: (K.K.M.); (H.M.M.); Tel.: +256-772-56-7940 (K.K.M.); +47-98-86-86-83 (H.M.M.)
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Chambaro HM, Sasaki M, Simulundu E, Silwamba I, Sinkala Y, Gonzalez G, Squarre D, Fandamu P, Lubaba CH, Munyeme M, Maseko A, Chimvwele C, Mataa L, Mooya LE, Mukubesa AN, Harima H, Samui KL, Munang’andu HM, Simuunza M, Nalubamba KS, Qiu Y, Carr MJ, Hall WW, Eshita Y, Sawa H, Orba Y. Co-Circulation of Multiple Serotypes of Bluetongue Virus in Zambia. Viruses 2020; 12:v12090963. [PMID: 32878170 PMCID: PMC7552058 DOI: 10.3390/v12090963] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Revised: 08/25/2020] [Accepted: 08/28/2020] [Indexed: 11/16/2022] Open
Abstract
Bluetongue (BT) is an arthropod-borne viral disease of ruminants with serious trade and socio-economic implications. Although the disease has been reported in a number of countries in sub-Saharan Africa, there is currently no information on circulating serotypes and disease distribution in Zambia. Following surveillance for BT in domestic and wild ruminants in Zambia, BT virus (BTV) nucleic acid and antibodies were detected in eight of the 10 provinces of the country. About 40% (87/215) of pooled blood samples from cattle and goats were positive for BTV nucleic acid, while one hartebeest pool (1/43) was positive among wildlife samples. Sequence analysis of segment 2 revealed presence of serotypes 3, 5, 7, 12 and 15, with five nucleotypes (B, E, F, G and J) being identified. Segment 10 phylogeny showed Zambian BTV sequences clustering with Western topotype strains from South Africa, intimating likely transboundary spread of BTV in Southern Africa. Interestingly, two Zambian viruses and one isolate from Israel formed a novel clade, which we designated as Western topotype 4. The high seroprevalence (96.2%) in cattle from Lusaka and Central provinces and co-circulation of multiple serotypes showed that BT is widespread, underscoring the need for prevention and control strategies.
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Affiliation(s)
- Herman M. Chambaro
- Research Center for Zoonosis Control, Hokkaido University, Sapporo 001-0020, Japan; (M.S.); (H.H.); (H.S.)
- Virology Unit, Central Veterinary Research Institute, Lusaka 10101, Zambia;
- Ministry of Fisheries and Livestock, Lusaka 10101, Zambia; (Y.S.); (P.F.); (C.H.L.); (A.M.); (C.C.); (L.M.)
- Correspondence: (H.M.C.); (E.S.); (Y.O.); Tel.: +81-80-1375-4174 (H.M.C.); +26-09-7746-9479 (E.S.); +81-11-706-5185 (Y.O.)
| | - Michihito Sasaki
- Research Center for Zoonosis Control, Hokkaido University, Sapporo 001-0020, Japan; (M.S.); (H.H.); (H.S.)
| | - Edgar Simulundu
- School of Veterinary Medicine, The University of Zambia, Lusaka 10101, Zambia; (I.S.); (M.M.); (A.N.M.); (K.L.S.); (M.S.); (K.S.N.)
- Macha Research Trust, Choma 10101, Zambia
- Correspondence: (H.M.C.); (E.S.); (Y.O.); Tel.: +81-80-1375-4174 (H.M.C.); +26-09-7746-9479 (E.S.); +81-11-706-5185 (Y.O.)
| | - Isaac Silwamba
- School of Veterinary Medicine, The University of Zambia, Lusaka 10101, Zambia; (I.S.); (M.M.); (A.N.M.); (K.L.S.); (M.S.); (K.S.N.)
| | - Yona Sinkala
- Ministry of Fisheries and Livestock, Lusaka 10101, Zambia; (Y.S.); (P.F.); (C.H.L.); (A.M.); (C.C.); (L.M.)
| | - Gabriel Gonzalez
- National Virus Reference Laboratory, School of Medicine, Dublin DO4V1W8, Ireland; (G.G.); (M.J.C.); (W.W.H.)
| | - David Squarre
- The University of Edinburgh, Edinburgh EH25 9RG, Scotland, UK;
- Department of National Parks and Wildlife, Chilanga 10101, Zambia
| | - Paul Fandamu
- Ministry of Fisheries and Livestock, Lusaka 10101, Zambia; (Y.S.); (P.F.); (C.H.L.); (A.M.); (C.C.); (L.M.)
| | - Caesar H. Lubaba
- Ministry of Fisheries and Livestock, Lusaka 10101, Zambia; (Y.S.); (P.F.); (C.H.L.); (A.M.); (C.C.); (L.M.)
| | - Musso Munyeme
- School of Veterinary Medicine, The University of Zambia, Lusaka 10101, Zambia; (I.S.); (M.M.); (A.N.M.); (K.L.S.); (M.S.); (K.S.N.)
| | - Alikhadio Maseko
- Ministry of Fisheries and Livestock, Lusaka 10101, Zambia; (Y.S.); (P.F.); (C.H.L.); (A.M.); (C.C.); (L.M.)
| | - Choopa Chimvwele
- Ministry of Fisheries and Livestock, Lusaka 10101, Zambia; (Y.S.); (P.F.); (C.H.L.); (A.M.); (C.C.); (L.M.)
| | - Liywalii Mataa
- Ministry of Fisheries and Livestock, Lusaka 10101, Zambia; (Y.S.); (P.F.); (C.H.L.); (A.M.); (C.C.); (L.M.)
| | - Lynnfield E. Mooya
- Virology Unit, Central Veterinary Research Institute, Lusaka 10101, Zambia;
- Ministry of Fisheries and Livestock, Lusaka 10101, Zambia; (Y.S.); (P.F.); (C.H.L.); (A.M.); (C.C.); (L.M.)
| | - Andrew N. Mukubesa
- School of Veterinary Medicine, The University of Zambia, Lusaka 10101, Zambia; (I.S.); (M.M.); (A.N.M.); (K.L.S.); (M.S.); (K.S.N.)
| | - Hayato Harima
- Research Center for Zoonosis Control, Hokkaido University, Sapporo 001-0020, Japan; (M.S.); (H.H.); (H.S.)
| | - Kenny L. Samui
- School of Veterinary Medicine, The University of Zambia, Lusaka 10101, Zambia; (I.S.); (M.M.); (A.N.M.); (K.L.S.); (M.S.); (K.S.N.)
| | - Hetron M. Munang’andu
- Faculty of Veterinary Medicine and Biosciences, Norwegian University of Life Sciences, 0454 Oslo, Norway;
| | - Martin Simuunza
- School of Veterinary Medicine, The University of Zambia, Lusaka 10101, Zambia; (I.S.); (M.M.); (A.N.M.); (K.L.S.); (M.S.); (K.S.N.)
| | - King S. Nalubamba
- School of Veterinary Medicine, The University of Zambia, Lusaka 10101, Zambia; (I.S.); (M.M.); (A.N.M.); (K.L.S.); (M.S.); (K.S.N.)
| | - Yongjin Qiu
- Hokudai Center for Zoonosis Control in Zambia, School of Veterinary Medicine, University of Zambia, Lusaka 10101, Zambia; (Y.Q.); (Y.E.)
| | - Michael J. Carr
- National Virus Reference Laboratory, School of Medicine, Dublin DO4V1W8, Ireland; (G.G.); (M.J.C.); (W.W.H.)
- International Collaboration Unit, Research Center for Zoonosis Control, Hokkaido University, Sapporo 001-0020, Japan
| | - William W. Hall
- National Virus Reference Laboratory, School of Medicine, Dublin DO4V1W8, Ireland; (G.G.); (M.J.C.); (W.W.H.)
- International Collaboration Unit, Research Center for Zoonosis Control, Hokkaido University, Sapporo 001-0020, Japan
- Global Virus Network, Baltimore, MD 21201, USA
| | - Yuki Eshita
- Hokudai Center for Zoonosis Control in Zambia, School of Veterinary Medicine, University of Zambia, Lusaka 10101, Zambia; (Y.Q.); (Y.E.)
| | - Hirofumi Sawa
- Research Center for Zoonosis Control, Hokkaido University, Sapporo 001-0020, Japan; (M.S.); (H.H.); (H.S.)
- International Collaboration Unit, Research Center for Zoonosis Control, Hokkaido University, Sapporo 001-0020, Japan
- Global Virus Network, Baltimore, MD 21201, USA
| | - Yasuko Orba
- Research Center for Zoonosis Control, Hokkaido University, Sapporo 001-0020, Japan; (M.S.); (H.H.); (H.S.)
- International Collaboration Unit, Research Center for Zoonosis Control, Hokkaido University, Sapporo 001-0020, Japan
- Correspondence: (H.M.C.); (E.S.); (Y.O.); Tel.: +81-80-1375-4174 (H.M.C.); +26-09-7746-9479 (E.S.); +81-11-706-5185 (Y.O.)
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