Moving past the challenges and misconceptions in urban adaptation research

Although the field of urban evolutionary ecology has recently expanded, much progress has been made in identifying adaptations that arise as a result of selective pressures within these unique environments. However, as studies within urban environments have rapidly increased, researchers have recognized that there are challenges and opportunities in characterizing urban adaptation. Some of these challenges are a consequence of increased direct and indirect human influence, which compounds long-recognized issues with research on adaptive evolution more generally. In this perspective, we discuss several common research challenges to urban adaptation related to (1) methodological approaches, (2) trait-environment relationships and the natural history of organisms, (3) agents and targets of selection, and (4) habitat heterogeneity. Ignoring these challenges may lead to misconceptions and further impede our ability to draw conclusions regarding evolutionary and ecological processes in urban environments. Our goal is to first shed light on the conceptual challenges of conducting urban adaptation research to help avoid the propagation of these misconceptions. We further summarize potential strategies to move forward productively to construct a more comprehensive picture of urban adaptation, and discuss how urban environments also offer unique opportunities and applications for adaptation research.

A global horizon scan for urban evolutionary ecology

Research on the evolutionary ecology of urban areas reveals how human-induced evolutionary changes affect biodiversity and essential ecosystem services. In a rapidly urbanizing world imposing many selective pressures, a time-sensitive goal is to identify the emergent issues and research priorities that affect the ecology and evolution of species within cities. Here, we report the results of a horizon scan of research questions in urban evolutionary ecology submitted by 100 interdisciplinary scholars. We identified 30 top questions organized into six themes that highlight priorities for future research. These research questions will require methodological advances and interdisciplinary collaborations, with continued revision as the field of urban evolutionary ecology expands with the rapid growth of cities.

The impact of urbanization on outcrossing rate and population genetic variation in the native wildflower, Impatiens capensis

Cities are one of the fastest growing ecosystems on the planet, and conserving urban biodiversity is of primary importance. Urbanization increases habitat fragmentation and may be particularly problematic for native plant species which often exist in small, remnant populations in cities. We studied the effects of urbanization on Impatiens capensis, a self-compatible native wildflower, which is an important nectar and pollen source for native bees and hummingbirds. We sampled I. capensis from six populations located in urban and rural habitats in Toronto, Ontario, Canada. We sequenced the DNA of 43 families (N = 86 individuals) using genotype-by-sequencing to obtain 5627 single nucleotide polymorphisms. From each parent and offspring, we estimated individual outcrossing rates, population-level genetic diversity and genetic structure among populations. We found that 95% of plants were outcrossed, and populations were genetically differentiated, where urban populations contained a subset of the genetic variation found in rural populations. Urban populations exhibited lower genetic diversity than rural populations, and we detected a relationship between population census size and habitat on genetic diversity. Despite high outcrossing rates, our results suggest that urbanization reduces the genetic diversity of I. capensis populations, potentially increasing the vulnerability of these populations to long-term population declines and extirpation in response to urbanization.

Urbanization alters interactions between Darwin's finches and Tribulus cistoides on the Galápagos Islands

Emerging evidence suggests that humans shape the ecology and evolution of species interactions. Islands are particularly susceptible to anthropogenic disturbance due to the fragility of their ecosystems; however, we know little about the susceptibility of species interactions to urbanization on islands. To address this gap, we studied how the earliest stages of urban development affect interactions between Darwin's finches and its key food resource, Tribulus cistoides, in three towns on the Galápagos Islands. We measured variation in mericarp predation rates, mericarp morphology, and finch community composition using population surveys, experimental manipulations, and finch observations conducted in habitats within and outside of each town. We found that both seed and mericarp removal rates were higher in towns than natural habitats. We also found that selection on mericarp size and defense differed between habitats in the survey and experimental populations and that towns supported smaller and less diverse finch communities than natural habitats. Together, our results suggest that even moderate levels of urbanization can alter ecological interactions between Darwin's finches and T. cistoides, leading to modified natural selection on T. cistoides populations. Our study demonstrates that trophic interactions on islands may be susceptible to the anthropogenic disturbance associated with urbanization. Despite containing the highest diversity in the world, studies of urbanization are lacking from the tropics. Our study identified signatures of urbanization on species interactions in a tropical island ecosystem and suggests that changes to the ecology of species interactions has the potential to alter evolution in urban environments.

Socio-eco-evolutionary dynamics in cities

Cities are uniquely complex systems regulated by interactions and feedbacks between nature and human society. Characteristics of human society-including culture, economics, technology and politics-underlie social patterns and activity, creating a heterogeneous environment that can influence and be influenced by both ecological and evolutionary processes. Increasing research on urban ecology and evolutionary biology has coincided with growing interest in eco-evolutionary dynamics, which encompasses the interactions and reciprocal feedbacks between evolution and ecology. Research on both urban evolutionary biology and eco-evolutionary dynamics frequently focuses on contemporary evolution of species that have potentially substantial ecological-and even social-significance. Still, little work fully integrates urban evolutionary biology and eco-evolutionary dynamics, and rarely do researchers in either of these fields fully consider the role of human social patterns and processes. Because cities are fundamentally regulated by human activities, are inherently interconnected and are frequently undergoing social and economic transformation, they represent an opportunity for ecologists and evolutionary biologists to study urban "socio-eco-evolutionary dynamics." Through this new framework, we encourage researchers of urban ecology and evolution to fully integrate human social drivers and feedbacks to increase understanding and conservation of ecosystems, their functions and their contributions to people within and outside cities.

Multivariate phenotypic divergence along an urbanization gradient

Evidence suggests that natural populations can evolve to better tolerate the novel environmental conditions associated with urban areas. Studies of adaptive divergence in urban areas often examine one or a few traits at a time from populations residing only at the most extreme urban and nonurban habitats. Thus, whether urbanization drives divergence in many traits simultaneously in a manner that varies with the degree of urbanization remains unclear. To address this gap, we generated seed families of white clover (Trifolium repens) collected from 27 populations along an urbanization gradient in Toronto, Canada, grew them in a common garden, and measured 14 phenotypic traits. Families from urban sites had evolved later phenology and germination, larger flowers, thinner stolons, reduced cyanogenesis, greater biomass and greater seed set. Pollinator observations revealed near-complete turnover of pollinator morphological groups along the urbanization gradient, which may explain some of the observed divergences in floral traits and phenology. Our results suggest that adaptation to urban environments involves multiple traits.

A roadmap for urban evolutionary ecology

Urban ecosystems are rapidly expanding throughout the world, but how urban growth affects the evolutionary ecology of species living in urban areas remains largely unknown. Urban ecology has advanced our understanding of how the development of cities and towns change environmental conditions and alter ecological processes and patterns. However, despite decades of research in urban ecology, the extent to which urbanization influences evolutionary and eco-evolutionary change has received little attention. The nascent field of urban evolutionary ecology seeks to understand how urbanization affects the evolution of populations, and how those evolutionary changes in turn influence the ecological dynamics of populations, communities, and ecosystems. Following a brief history of this emerging field, this Perspective article provides a research agenda and roadmap for future research aimed at advancing our understanding of the interplay between ecology and evolution of urban-dwelling organisms. We identify six key questions that, if addressed, would significantly increase our understanding of how urbanization influences evolutionary processes. These questions consider how urbanization affects nonadaptive evolution, natural selection, and convergent evolution, in addition to the role of urban environmental heterogeneity on species evolution, and the roles of phenotypic plasticity versus adaptation on species' abundance in cities. Our final question examines the impact of urbanization on evolutionary diversification. For each of these six questions, we suggest avenues for future research that will help advance the field of urban evolutionary ecology. Lastly, we highlight the importance of integrating urban evolutionary ecology into urban planning, conservation practice, pest management, and public engagement.

The evolution of city life

Urbanization represents a dominant and growing form of disturbance to Earth's natural ecosystems, affecting biodiversity and ecosystem services on a global scale. While decades of research have illuminated the effects of urban environmental change on the structure and function of ecological communities in cities, only recently have researchers begun exploring the effects of urbanization on the evolution of urban populations. The 15 articles in this special feature represent the leading edge of urban evolutionary biology and address existing gaps in our knowledge. These gaps include: (i) the absence of theoretical models examining how multiple evolutionary mechanisms interact to affect evolution in urban environments; (ii) a lack of data on how urbanization affects natural selection and local adaptation; (iii) poor understanding of whether urban areas consistently affect non-adaptive and adaptive evolution in similar ways across multiple cities; (iv) insufficient data on the genetic and especially genomic signatures of urban evolutionary change; and (v) limited understanding of the evolutionary processes underlying the origin of new human commensals. Using theory, observations from natural populations, common gardens, genomic data and cutting-edge population genomic and landscape genetic tools, the papers in this special feature address these gaps and highlight the power of urban evolutionary biology as a globally replicated 'experiment' that provides a powerful approach for understanding how human altered environments affect evolution.

The effects of plant sexual system and latitude on resistance to herbivores

PREMISE OF THE STUDY

The strength of plant-herbivore interactions varies in space and time, but the factors that explain this variation are poorly understood. Several lines of research suggest that variation in plant reproductive systems and latitude may explain resistance against herbivores, but how these factors jointly affect plant-herbivore interactions has not been investigated in detail. We examined the effects of latitude, sexual system, and plant gender on herbivory in Sagittaria latifolia, an aquatic plant in which populations are typically monoecious (separate female and male flowers) or dioecious (separate female and male plants).

METHODS

We surveyed 43 populations of S. latifolia between 42 and 48° N in Ontario, Canada. In each population, we recorded the sexual system and obtained estimates of herbivore damage to ramets of known gender (i.e. female, male, or hermaphrodite) by the weevil Listronotus appendiculatus, the principal herbivore of S. latifolia. Herbivore damage was quantified as the percent leaf area removed by adult L. appendiculatus weevils, and the abundance of larvae feeding within flowering stalks, which was correlated with the amount of damage by herbivores to the inflorescence.

KEY RESULTS

Leaf herbivory significantly decreased with increasing latitude but did not vary with sexual system or plant gender. By contrast, larvae were more abundant in dioecious populations and on female plants, corresponding to increased stem damage, providing evidence for sex-biased larval abundance in S. latifolia. These effects of sexual system and gender on larval abundance were strongest at lower latitudes.

CONCLUSIONS

Our study found latitudinal variation in leaf herbivory and sex-biased resistance to weevil larvae that feed on the reproductive tissues of S. latifolia, which is predicted to be a necessary condition for herbivory to influence the evolution of dioecy.

Why is gynodioecy a rare but widely distributed sexual system? Lessons from the Lamiaceae

Gynodioecy, a sexual system where females and hermaphrodites co-occur, is found in << 1% of angiosperm species. To understand why gynodioecy is rare, we need to understand why females are maintained in some lineages, but not in others. We modelled the evolution of gynodioecy in the Lamiaceae, and investigated whether transition rates between gynodioecious and nongynodioecious states varied across the family. We also investigated whether the evolution of gynodioecy was correlated with the evolution of a herbaceous growth form and temperate distribution. Transition rates differed between Lamiaceae subfamilies. In the Nepetoideae, there were many transitions towards gynodioecy (n = 11), but also many reversions to nongynodioecy (n = 29). In addition, a herbaceous growth form, but not a temperate distribution, affected the rate of transitions both towards and away from gynodioecy; transitions towards gynodioecy occurred ˜16 times more frequently and transitions away from gynodioecy occurred ˜11 times more frequently in herbaceous lineages than in woody lineages. Within the Lamiaceae, lineages in which gynodioecy has frequently evolved also have a high rate of reversions to the nongynodioecious state. Consequently, to understand why gynodioecy is rare, we need to understand why sexual systems are more evolutionarily labile in some lineages than in others.

Frequency-dependent fitness in gynodioecious Lobelia siphilitica

Selection is frequency dependent when an individual's fitness depends on the frequency of its phenotype. Frequency-dependent selection should be common in gynodioecious plants, where individuals are female or hermaphroditic; if the fitness of females is limited by the availability of pollen to fertilize their ovules, then they should have higher fitness when rare than when common. To test whether the fitness of females is frequency dependent, we manipulated the sex ratio in arrays of gynodioecious Lobelia siphilitica. To test whether fitness was frequency dependent because of variation in pollen availability, we compared open-pollinated and supplemental hand-pollinated plants. Open-pollinated females produced more seeds when they were rare than when they were common, as expected if fitness is negatively frequency dependent. However, hand-pollinated females also produced more seeds when they were rare, indicating that variation in pollen availability was not the cause of frequency-dependent fitness. Instead, fitness was frequency dependent because both hand- and open-pollinated females opened more flowers when they were rare than when they were common. This plasticity in the rate of anthesis could cause fitness to be frequency dependent even when reproduction is not pollen limited, and thus expand the conditions under which frequency-dependent selection operates in gynodioecious species.